Carg23293 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23293
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cell cycle checkpoint control protein RAD9A isoform X1
Location	Carg_Chr12: 10125032 .. 10131378 (-)
RNA-Seq Expression	Carg23293
Synteny	Carg23293

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGAGTATTCTTCCTTCTTCCCGCCAATACAGAACCAGTGCGATTCCATTTCCCCTCTCGGACTCGATCATCGGAAGCCGATAGAGGTGAGATCAATGGAGTTTATTCTGAGTGGAAATGCTCTCAAAGACTTCGCTCGCTCAGTCACATGCCTTGCTCGCATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGGTACTCGATATTCTCCCTTTTTCCTCGAGTTCTGCCTCCCTAGAATAGTTTAATCAAAGATTCTCACATCGTTTGCATCTGAAGAAACAGTAAGCTTAATTTTGTGCTAAATTTTGATGAGTTCAAAATTAGGCGGAGATATTTGTATTGCGTAAGCGATTCTGGAAACAGTACATTGTTCGGTGAATTTATATCCAATTTATTGACCATTTTATGCATGTAGAACGTGGTTAGCAACTTTGAGCGAAATTAACTTCTATATAGAAATGCAAATTTTCCTCTGCTCTTTGTCTGGAAACCAAAATTGAGTGAACTTTGTTATGTCAATTTGTAAAAATAAGATGGAAATAATGTAGCTAAAACCTTGAGGCTTGCTTAGCTTTTGTGAGTTGTTTTGGTATGGAAATTATATGGAAGGATCAATTTTAAAGCTGATTGTTTTATTTTCAAGTTCAGTTGGCTTTTTACACCCTCAATGCATCACGGTCTGCCTATCAAGCTATAACCTTTGAGCCTGGGTTCTTTGATACTTATGCCATTTCTGGTAATCAAAGTGCAATGCAGTGTTCTTTTGAAGGTATGCATGATTCTTGTGCTGTATTGCATTCACTAACAGTACTTAGCACCCATGCTTACTTATTATGACATTCCATGTCAGGCTGTCTGCTCTGTTCTTAGAACATCCATTGCTAGCGTAGACCATCTGAGAGTGCGGTTACCAGATACTTATGCATTGAAAATACAATGGAGTTTGGAATGCTTCAATGGTCAGCTGCCCTTTTATAGTTTATACGAGTACTCACGTTTTATCTAAAAATCATGTTTAAATGATCTATGTTCATTGATACAGATGCCTACTAATTAAGATTGTCTCACAATGACGACTAACTTACATGGTTCCAGTATGTTGACATTGGTTGATTATATATCCTCTGAGAGAACTACAAATAAAGCAAATCTAATATTTTTAGTGTCATGTACACTAAGCATACAACATCACTGCATCGTGTGCTGCTATTATGCTGGTAGTTATATTCAAAGATAGAGGGGCAATAAATGAAACCTTGGTATATATATATATATATCTACAACAATGTCCAATAAGCGCAACAAAAGTGATGCAAAGGTGAAAATGCACCATGATGAATGTCTGTTAATGCGTTCCATGTTTGCAAATTCATCCAGTTATCAAGGGTATAGATTACCCTAAACTTGTTAAATTGGCCTACATAAAAGTGATGCAAGAAGGATCATTGTTCTTACGAAATGATTTTGTGTTTTCAATACTATATAGTTTTATACTATGATAAATTTTCCTTTAAATACATCAATCTTATCTGGTTTGCAGGAATAAAGAAAACATACTGCATTTCTTGCAACGTTGAGCCAGACATACAGCACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATCGATTACTATCTAATTTTCAGTCATCCTTGCAGGAGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAATTGAGATTGAAGGAAAGGCTGTTTGAGCTTCGAAGTTATATAGACCAACCAAAGGTGATAATGATATGTACAGCCTAGATTAATTAATATATTTCACCTTAAAATTTTCCCCCCAATCAACTCCTTAGAGATGTTGACTCTTGAAAAATTCGTTACATTCAATGGATCTACCAAATATAGGTGATGCTTCATTCTTTAACTGCAGACAATGACGCGCTGCTTCATACTCAACTCTGGATAGATCCTATGGAAGAGTTTGTCCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGTACTTGTTGGACCTCACTTGTGGATTAATTCAATTTTTCTTTTTTTTTTTTTTTTTTTTTGGAATGCTGCTCTTCTGGTATTACGACCAACATTTTCTTCTATATGCTTTGTGGTGAGTTGATATTATTGTTGTTATTATTATTTTTACAATCTTGGGCTATATGTAGGAAGCACAATTAATTTAAAGCTTATCTTTTTTGATATTCATGGTTTAGAAATTTTCTTTAAGCTACTTTCATCATCATTTCAGGCATTTCTTTCTTTCTGCGAGGGCTGTGAAGTTGACATCCATCTGTTTTTTGAAAAAGCTGGGGAGTAAGAATTGCACGTCTCTTGTCCTCTGACTTTTTTTTTGTTTATTTTTATTGATTTTGCTCCCTTTTTTTACATTCTTTTTAGCATTTAATTGTTGAGGTCCTCTGACTTCTAATTGGCATAGTGGTGCTGAAATACCAGTTCTGCTCTTCTAACCGCTTGACTTAGGCATGAAAATATTTTTTTCATCTTTCTGGTTAGCACTTGGTAACTAGGTTTCTGAATGAAATACAAATATTAGAGCACAAGAAGAAAAAATATGTACAAGATGTGCCTGAATAAGATTCATTTTACGGAACTGCGAGGTGTATTAATTTCTACATGGTTAAATGTTAAATGGCATGTAGATCTGGTGGAAAGTTATATACAGTTTTGACGCTTATAGTCCATGGATTATTTGTGTTATCTCCCAGAGGAAGGAGTATTACGTCCATACTCTTCTAAATCTAAAAAGCAATTTCTCTAGCCTGATCATTTAATTTTGATGCTACACTTGTTCTTATGGTGCAAGTAATTTTCATACAAAGTAAACTTTGTTACCGAATATGATAGGATTTTGTATTTGGGTGTGCAGGCCAATTCTATTGGCGCCAAAATTTGGTCTAGATGATGGGTCTGGTACAAACTTTGATGCTACACTTGTTCTTGCGACCATGTTAGTATCACAGCTCCATGCGGGAAGCCGATCACAGCCTCCACAAGAGGCTACTACTGGACAGGGTGAATCTGATCACAGGGCTGGGTCCCAACCACAGCAGGATGGGCCCGGAGCTAATGTTTCTGGCCATCCATCTGATCATACCAGAATATGGTCTGAACTCTCAGGTCTCTATTTTTATCCATGCCTGAACCTAGGCCTTTCATAACCCTGTCACAAAATCTTTAGTTCTCTCATTTGAGTAGAACTTCGATAAAAAAAACTGTTTTGTATCTAAAATCATCCTTTTTTAGGTAGTGCACCAAGAAGTGGGAATGGTGCTGAAGGACAGGTACAAGGCCAGAGCAATTTGAGTTCTTCTGAACAGATGGAAATTCAAAGGATTAGTAATGTACAGATTTCAAAAGCTGGGTGCGCTCAGGGATATAACCTTGTCGATCGTGCTAGGTATCCTTTACAATGCAACCTGTCTCCATAACGATTAGTTTTGAAGTGATAATCTGGTTATGTTGTTTGTATGTGATGTCGCTTACAATTCTAATGAATTTCACACCAATGTGAATGTTAGTTTACTTGATAAAATTGGGTATGGTGACCCCGTCTTTGCTGATAGGATCGAACATCTACCTTTCATCAAGAATATTATTCTTAGTATTGGAAGGTGATGTGGAGCTAACTATAATTTAGAGCCTTCAGTCCTATCCGACTAGATTTCTTTCTTTTTTTTGGACTGGACTAGGTTTTGGAAACGGGATACTGACATCCTTGCCGGAAAACTGTCCTTTCACTAGCTATTATCGTAAAATATAGTACTTCATGCCTCACAAAGCACTTGCTTGTCGTTGTTGTTTGGAAGAAGTGAACACTGAGAATAGCATGAACTTGTATATTGCATTTCTTTTTAACAGAGATCTTACAACTAATATAAAACACCCAAAGAAGTGGGCAACAATTGAGTAAAGTATGGAAAACATTAATGAAGTATGGGACCGGTTTCACCATTGATAAGACACAGCAAATTGAAAATAAGGAAGACTGTAGAGTTACCAATGTGTGCGTATTAGGTGAGCAGAAGGTTGAGGCAGTTTCCTCTTCACCGTACAGCAACTGTACTATGTTGTAACTTATACATTGTTACTGTACTCAACTTAGAGAACATTTCTATCTTTTAGTTCGTGAAATATTATATTTTTTTTCCAGATATATTTACTTATAGTTCTTAAGTAACATGACTGTTTAATGTAGAGACCATTCTGTGGGAAGGGATCTGGGAAGAGAACATCAAGGTCAGTAGATACCTCATTATTCATTCACTTAACCCATTATATCTTATTACACCTGCTGCTCGTAACTTTTTCTTGTTGGTCTACACGATACTTTCAGAGAGGTCTGATATAAACGGTCCTGCCGTTTCTCAACACCATCCCAGTAACTGGGTAGATGAAGAAGATGAGGATGATGACAACGATGATGGGGATGATAACGAGTTGTGTGTTCAGTCAACTCCACCATACTATGAAGAACACTAGAAAGGTATTTTTTTATTTATTTATTTTTTTTTGTCTTAATTGCATGTTGCATCTACTTTTTTGTTGGCTCATGAACCTAATTAGATTGTTGAGCCCTATCTCGTAATTTCTTCCAATCACATATATGTTTTGTTTGACTCTGCTTATTGGTTGCAAGTCTAGCAATATGGTCCCTGTTTGTTTTGAAATTATCTGAACTATGCTACTGTTTGAGGTGTGACATGTACCTTTCCTATCAACTACATAATAAACTATTGCGATTGAGCTTATTTACCACTTAATCAAGGTAGATCACGAGCTCTCATAACAGATGTATTTTCCCTATGGGTTATTTTTATGTTTTCTCTCCCCCTCTTTTTATCTATAATTGGAGAGCTCTTTCTATAATCTCTACTAATCATGTGGCAACGCTTGACACTGCTATATTTGGTGGTGAAGGTAACTCAGGGGATACTAGATCGTAGGTAGGTGGTCACTACGACTTGAACTCATTCCCTCTAAACCCTTTATTATATACACGACTTTTATTGAGAAAAAAAAAAAAAACCTTGATTTAGGTAATATTTGTGTAATCCCATTAAATAATAGAAATAGTTAATCTTATTATATTGTTACTAGTGATTAGAGATTTATATAGATTTATCTTGTCTTGTTACCTATTACCTGTTACCTATTATCTAGAGATTTATTTAGATTACCTAATATCTAGTAAATCTAGATTTAGTTAGCCTTTCTTTTAGTTTGTCTTTATAGGGACATGTAATTCTCTAGAAAAAAAAAAGAAAAAGAAAAAAGAGCTAATTTAGATTGGTCATACACCCTCATACTGACCAATATGGAATGGTAAAGACTTATCTAGGATGAAAGCATGTAAAAGAGGTTTGAAATGGGCATGCAACCATGGACAACACGTCATGGACAAACAAGACCAAAATATTTGTCATGCGACCATTGACAACACGCCTTGGACATGCATGACCGTGACATCCTTCCCCACTTAATTGGTTGACGTCCCTGTCAACCAACCTGAACAAGCAAGACTAGGACATCTGTCATGCGGCCATAAACAACATGCTTTGGACAAGCATGATCGTGGTAACAGTTAATAATATGTTAAATCAAATGTATTTTTTTTAAAAATATTTTATTATTTTATATCTGTGAATGTCTGTATCAGTTTGTGCAGAGTTTAACTATCTGACAAGAAAAAAAAGCAAGCTAATTTAGACCTTGCTACGTTTGGTCGTCAAAGTTGGATATTAAATTCTAAGTAGGTGGCTACTATGAGTTCGTTCTTTCCAAAACTTTTATTATTTACATAACCCTTATTTACCACTATATCGGTGGTTAAACAAATTCTTTTGTAGTTGGGCATTTTCCATTTCTCCAGCATTATTGAATCACATTTTGTACTGTTTGGCAATATCACACATAACCAGTTGTCTGCTTTCTACACTATACTCATGCATGCTTGCTTGCCTGCCTGCCTGCCTGCCTGCCTGCATATTGACAGGGTAATCACATACCAATTCGACAACATAGTTCGTACGACGTTAAATGCAGGGCCCGACTTCAGAAGACACCAACACGGATGGCTCAGTCCTATGGAAGTGTAGCGTAACATCAACCTGGGCGTGAGAAGAAGATGCCAACTCCCTCAACTCCCTCTCATTTAGCTGGTGGTTTGTGTATCCTTGCCTTAATCATTGGGTCAGTTTGGTCATAAACTGTTCATCTTTTACCAGTTCCAGTAAAGTTGTAAACAGAATCAGCTGTT

mRNA sequence

CGGAGTATTCTTCCTTCTTCCCGCCAATACAGAACCAGTGCGATTCCATTTCCCCTCTCGGACTCGATCATCGGAAGCCGATAGAGGTGAGATCAATGGAGTTTATTCTGAGTGGAAATGCTCTCAAAGACTTCGCTCGCTCAGTCACATGCCTTGCTCGCATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGTTGGCTTTTTACACCCTCAATGCATCACGGTCTGCCTATCAAGCTATAACCTTTGAGCCTGGGTTCTTTGATACTTATGCCATTTCTGGTAATCAAAGTGCAATGCAGTGTTCTTTTGAAGGTATGCATGATTCTTGTGCTGCTGTCTGCTCTGTTCTTAGAACATCCATTGCTAGCGTAGACCATCTGAGAGTGCGGTTACCAGATACTTATGCATTGAAAATACAATGGAGTTTGGAATGCTTCAATGGAATAAAGAAAACATACTGCATTTCTTGCAACGTTGAGCCAGACATACAGCACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATCGATTACTATCTAATTTTCAGTCATCCTTGCAGGAGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAATTGAGATTGAAGGAAAGGCTGTTTGAGCTTCGAAGTTATATAGACCAACCAAAGGTGATGCTTCATTCTTTAACTGCAGACAATGACGCGCTGCTTCATACTCAACTCTGGATAGATCCTATGGAAGAGTTTGTCCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGCATTTCTTTCTTTCTGCGAGGGCTGTGAAGTTGACATCCATCTGTTTTTTGAAAAAGCTGGGGAGCCAATTCTATTGGCGCCAAAATTTGGTCTAGATGATGGGTCTGGTACAAACTTTGATGCTACACTTGTTCTTGCGACCATGTTAGTATCACAGCTCCATGCGGGAAGCCGATCACAGCCTCCACAAGAGGCTACTACTGGACAGGGTGAATCTGATCACAGGGCTGGGTCCCAACCACAGCAGGATGGGCCCGGAGCTAATGTTTCTGGCCATCCATCTGATCATACCAGAATATGGTCTGAACTCTCAGGTAGTGCACCAAGAAGTGGGAATGGTGCTGAAGGACAGGTACAAGGCCAGAGCAATTTGAGTTCTTCTGAACAGATGGAAATTCAAAGGATTAGTAATGTACAGATTTCAAAAGCTGGGTGCGCTCAGGGATATAACCTTGTCGATCGTGCTAGAGACCATTCTGTGGGAAGGGATCTGGGAAGAGAACATCAAGAGAGGTCTGATATAAACGGTCCTGCCGTTTCTCAACACCATCCCAGTAACTGGGTAGATGAAGAAGATGAGGATGATGACAACGATGATGGGGATGATAACGAGTTGTGTGTTCAGTCAACTCCACCATACTATGAAGAACACTAGAAAGGGTAATCACATACCAATTCGACAACATAGTTCGTACGACGTTAAATGCAGGGCCCGACTTCAGAAGACACCAACACGGATGGCTCAGTCCTATGGAAGTGTAGCGTAACATCAACCTGGGCGTGAGAAGAAGATGCCAACTCCCTCAACTCCCTCTCATTTAGCTGGTGGTTTGTGTATCCTTGCCTTAATCATTGGGTCAGTTTGGTCATAAACTGTTCATCTTTTACCAGTTCCAGTAAAGTTGTAAACAGAATCAGCTGTT

Coding sequence (CDS)

ATGGAGTTTATTCTGAGTGGAAATGCTCTCAAAGACTTCGCTCGCTCAGTCACATGCCTTGCTCGCATCGGAAACGAGCTCGTCATCCAAGCTTCTCCATCGCAGTTGGCTTTTTACACCCTCAATGCATCACGGTCTGCCTATCAAGCTATAACCTTTGAGCCTGGGTTCTTTGATACTTATGCCATTTCTGGTAATCAAAGTGCAATGCAGTGTTCTTTTGAAGGTATGCATGATTCTTGTGCTGCTGTCTGCTCTGTTCTTAGAACATCCATTGCTAGCGTAGACCATCTGAGAGTGCGGTTACCAGATACTTATGCATTGAAAATACAATGGAGTTTGGAATGCTTCAATGGAATAAAGAAAACATACTGCATTTCTTGCAACGTTGAGCCAGACATACAGCACTTGTCTCTTGACAGGAGACAGTTCCCAAGTGACTTAGTTGTGAGACCTCGAGATCTGAATCGATTACTATCTAATTTTCAGTCATCCTTGCAGGAGAGATCACTGTTATTGCAACAGAACCAACTTCCTTACCTTCTGAAGCTGCAATTGAGATTGAAGGAAAGGCTGTTTGAGCTTCGAAGTTATATAGACCAACCAAAGGTGATGCTTCATTCTTTAACTGCAGACAATGACGCGCTGCTTCATACTCAACTCTGGATAGATCCTATGGAAGAGTTTGTCCATTATTCTCACAGTGGAGATCCGGTAGACATAACATTTGGAGTAAAAGAATTGAAGGCATTTCTTTCTTTCTGCGAGGGCTGTGAAGTTGACATCCATCTGTTTTTTGAAAAAGCTGGGGAGCCAATTCTATTGGCGCCAAAATTTGGTCTAGATGATGGGTCTGGTACAAACTTTGATGCTACACTTGTTCTTGCGACCATGTTAGTATCACAGCTCCATGCGGGAAGCCGATCACAGCCTCCACAAGAGGCTACTACTGGACAGGGTGAATCTGATCACAGGGCTGGGTCCCAACCACAGCAGGATGGGCCCGGAGCTAATGTTTCTGGCCATCCATCTGATCATACCAGAATATGGTCTGAACTCTCAGGTAGTGCACCAAGAAGTGGGAATGGTGCTGAAGGACAGGTACAAGGCCAGAGCAATTTGAGTTCTTCTGAACAGATGGAAATTCAAAGGATTAGTAATGTACAGATTTCAAAAGCTGGGTGCGCTCAGGGATATAACCTTGTCGATCGTGCTAGAGACCATTCTGTGGGAAGGGATCTGGGAAGAGAACATCAAGAGAGGTCTGATATAAACGGTCCTGCCGTTTCTCAACACCATCCCAGTAACTGGGTAGATGAAGAAGATGAGGATGATGACAACGATGATGGGGATGATAACGAGTTGTGTGTTCAGTCAACTCCACCATACTATGAAGAACACTAG

Protein sequence

MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDTYAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLLLQQNQLPYLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH

Homology

[Close]

BLAST of Carg23293 vs. NCBI nr
Match: KAG7021084.1 (Cell cycle checkpoint control protein RAD9B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 928.3 bits (2398), Expect = 2.6e-266
Identity = 467/467 (100.00%), Postives = 467/467 (100.00%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT
Sbjct: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI
Sbjct: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLLLQQNQLPY 180
           KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLLLQQNQLPY
Sbjct: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLLLQQNQLPY 180

Query: 181 LLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPVD 240
           LLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPVD
Sbjct: 181 LLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPVD 240

Query: 241 ITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLV 300
           ITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLV
Sbjct: 241 ITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLV 300

Query: 301 SQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRS 360
           SQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRS
Sbjct: 301 SQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRS 360

Query: 361 GNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQE 420
           GNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQE
Sbjct: 361 GNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQE 420

Query: 421 RSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
           RSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH
Sbjct: 421 RSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 467

[Close]

BLAST of Carg23293 vs. NCBI nr
Match: XP_023537430.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537431.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537432.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 807.0 bits (2083), Expect = 8.6e-230
Identity = 420/468 (89.74%), Postives = 430/468 (91.88%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEF LSGNALK FARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           YAISGNQ  +QCS         AVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI
Sbjct: 61  YAISGNQ--VQCSV-----LLKAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLL-LQQNQLP 180
           KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQE +++  +   LP
Sbjct: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLP 180

Query: 181 YLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPV 240
              +  + ++ +  ELRSYID         T DNDALLHTQLWIDPMEEFVHYSHSGDPV
Sbjct: 181 --SEAAIEIEGKAVELRSYIDP--------TKDNDALLHTQLWIDPMEEFVHYSHSGDPV 240

Query: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300
           DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML
Sbjct: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300

Query: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360
           VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR
Sbjct: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360

Query: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420
           SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ
Sbjct: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420

Query: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
           ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH
Sbjct: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Carg23293 vs. NCBI nr
Match: KAG6586248.1 (Cell cycle checkpoint control protein RAD9A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 803.9 bits (2075), Expect = 7.3e-229
Identity = 418/468 (89.32%), Postives = 430/468 (91.88%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEF LSGNALK FARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT
Sbjct: 1   MEFNLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           YAISGNQ  +QCS         AVCSVLRTSIASVDHLRVRLPDT+ALKIQWSLECFNGI
Sbjct: 61  YAISGNQ--VQCSV-----LLKAVCSVLRTSIASVDHLRVRLPDTFALKIQWSLECFNGI 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLL-LQQNQLP 180
           KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQE +++  +   LP
Sbjct: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLP 180

Query: 181 YLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPV 240
              +  + ++ +  ELRSYID         T DNDALLHTQLWIDPMEEFVHYSHSGDPV
Sbjct: 181 --SEAAIEIEGKAVELRSYIDP--------TKDNDALLHTQLWIDPMEEFVHYSHSGDPV 240

Query: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300
           DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML
Sbjct: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300

Query: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360
           VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR
Sbjct: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360

Query: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420
           SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ
Sbjct: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420

Query: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
           ERSDINGPAVSQHHPSNWVDE+DEDDDNDDGDDNELCVQSTPPYYEEH
Sbjct: 421 ERSDINGPAVSQHHPSNWVDEDDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Carg23293 vs. NCBI nr
Match: XP_022937528.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937529.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937530.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937531.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937532.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_022937533.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata])

HSP 1 Score: 799.7 bits (2064), Expect = 1.4e-227
Identity = 417/468 (89.10%), Postives = 429/468 (91.67%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEF LSGNALK FARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT
Sbjct: 1   MEFNLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           YAISGNQ  +QCS         AVCSVLRTSIASVDHLRV+LPDTYALKIQWSLECFNGI
Sbjct: 61  YAISGNQ--VQCSV-----LLKAVCSVLRTSIASVDHLRVQLPDTYALKIQWSLECFNGI 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLL-LQQNQLP 180
           KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQE +++  +   LP
Sbjct: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLP 180

Query: 181 YLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPV 240
              +  + ++ +  ELRSYID         T DNDALLHTQLWIDPMEEFVHYSHSGDPV
Sbjct: 181 --SEAAIEIEGKAVELRSYIDP--------TKDNDALLHTQLWIDPMEEFVHYSHSGDPV 240

Query: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300
           DITFGV+ELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML
Sbjct: 241 DITFGVRELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300

Query: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360
           VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR
Sbjct: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360

Query: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420
           SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAG AQGYNLVDRARDHSVGRDLGREHQ
Sbjct: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGYAQGYNLVDRARDHSVGRDLGREHQ 420

Query: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
           ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH
Sbjct: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Carg23293 vs. NCBI nr
Match: XP_022965728.1 (cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita maxima] >XP_022965729.1 cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita maxima])

HSP 1 Score: 794.7 bits (2051), Expect = 4.4e-226
Identity = 415/468 (88.68%), Postives = 426/468 (91.03%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEF LSGNALK FARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           YAISGNQ  +QCS         AVCSVLRTS+ASVDHLRVRLPDTYALKIQWSLECFNGI
Sbjct: 61  YAISGNQ--VQCSV-----LLKAVCSVLRTSMASVDHLRVRLPDTYALKIQWSLECFNGI 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLL-LQQNQLP 180
           KKTYCIS NVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQE +++  +   LP
Sbjct: 121 KKTYCISSNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLP 180

Query: 181 YLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPV 240
              +  + ++ +  ELRSYID         T DNDALLHTQLWIDPMEEFVHYSHSGDPV
Sbjct: 181 --SEAAIEIEGKAVELRSYIDP--------TKDNDALLHTQLWIDPMEEFVHYSHSGDPV 240

Query: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300
           DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML
Sbjct: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300

Query: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360
           VSQLHAGSRSQPPQEATTGQGESDHR GSQ QQDGPGANVSGHPSDHTRIWSELSGSAPR
Sbjct: 301 VSQLHAGSRSQPPQEATTGQGESDHRTGSQAQQDGPGANVSGHPSDHTRIWSELSGSAPR 360

Query: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420
           SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVG DLGREHQ
Sbjct: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGGDLGREHQ 420

Query: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
           ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH
Sbjct: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Carg23293 vs. ExPASy Swiss-Prot
Match: Q6WBX8 (Cell cycle checkpoint control protein RAD9B OS=Homo sapiens OX=9606 GN=RAD9B PE=1 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-12
Identity = 89/350 (25.43%), Postives = 153/350 (43.71%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           ++ ++SG+ +K F ++V  L+RI +E  +  S   LA   +N+SRSAY  + F P FF  
Sbjct: 2   LKCVMSGSQVKVFGKAVQALSRISDEFWLDPSKKGLALRCVNSSRSAYGCVLFSPVFFQH 61

Query: 61  YAISGNQSAMQCSFE-GMHDSC-------AAVCSVLRTSIASVDHLRV-RLPDTYALKIQ 120
           Y  S      +   +  +H  C         +   L +   +++  R+    D   + IQ
Sbjct: 62  YQWSALVKMSENELDTTLHLKCKLGMKSILPIFRCLNSLERNIEKCRIFTRSDKCKVVIQ 121

Query: 121 WSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSL 180
           +     +GIK+T+ I C  E     +  D+    + L+++PR L   +  F SS +E +L
Sbjct: 122 FFYR--HGIKRTHNI-CFQESQPLQVIFDKNVCTNTLMIQPRLLADAIVLFTSSQEEVTL 181

Query: 181 LLQQNQLPYLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVH 240
            +    L + LK                       +  + D    +H+++++   +EF  
Sbjct: 182 AV--TPLNFCLKSS---------------------NEESMDLSNAVHSEMFVG-SDEF-D 241

Query: 241 YSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDA 300
           +   G   +ITF  KELK  L+F E     I ++F+  G+P+ L+    +DD      +A
Sbjct: 242 FFQIGMDTEITFCFKELKGILTFSEATHAPISIYFDFPGKPLALS----IDD---MLVEA 301

Query: 301 TLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSG 342
             +LAT+   Q    SR+  PQ     Q     R  S   +   G NV+G
Sbjct: 302 NFILATLADEQ----SRASSPQSLCLSQ----KRKRSDLIEKKAGKNVTG 308

[Close]

BLAST of Carg23293 vs. ExPASy Swiss-Prot
Match: Q5E9X8 (Cell cycle checkpoint control protein RAD9B OS=Bos taurus OX=9913 GN=RAD9B PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.9e-09
Identity = 74/309 (23.95%), Postives = 133/309 (43.04%), Query Frame = 0


Query: 7   GNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDTYAISGN 66
           G  ++ F +++  L+R+ +EL +  S   LA  ++N+ RSAY  + F P FF  Y  S +
Sbjct: 26  GQVVEVFGKAIQALSRVSDELWLDPSEKGLALRSVNSCRSAYGCVLFSPVFFQHYQWSAS 85

Query: 67  QSA--------MQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFN 126
                      + C   GM  S   +   L +   +V+  ++    +   K+     C +
Sbjct: 86  VKMNDTDIILNLNCRL-GM-KSILPIFRCLNSLEKNVEKCKI-FTRSDKCKVVIQFFCRH 145

Query: 127 GIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLLLQQNQL 186
           GIKK + +       +Q +   +    + LV++PR L   +  F SS +E +L       
Sbjct: 146 GIKKIHNVCFQGSRPLQ-VIFQKNMCANTLVIQPRVLAEAIVLFTSSQEEVTLA------ 205

Query: 187 PYLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDP 246
             +  L++ +K    E     D                +++++++ P +EF  +   G  
Sbjct: 206 --VTPLKVCIKSSNEESMDLTDS---------------VYSEMFVGP-DEF-DFFQIGID 265

Query: 247 VDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATM 306
            +ITF  KELK  L+F E     I + F+  G+P+ L+    +DD      +A  +LAT+
Sbjct: 266 TEITFCFKELKGVLTFSEAIHAPIAIHFDFPGKPMALS----IDD---MLLEANFILATL 298

Query: 307 LVSQLHAGS 308
                 A S
Sbjct: 326 ADEPSRASS 298

[Close]

BLAST of Carg23293 vs. ExPASy Swiss-Prot
Match: P26306 (DNA repair protein rad9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rad9 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-07
Identity = 70/329 (21.28%), Postives = 129/329 (39.21%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEF +S   L+D AR  T L+RI + +  + + +Q+    LN+SRS +  +T +  FFD 
Sbjct: 1   MEFTVSNVNLRDLARIFTNLSRIDDAVNWEINKNQIEITCLNSSRSGFSMVTLKKAFFDK 60

Query: 61  YAISGNQ---SAMQCSFEGMHDSCAAVCSVLRTSI------------------------- 120
           Y    +    + +      +      + SV R  I                         
Sbjct: 61  YIFQPDSVLLTGLMTPTIRIRTQVKPILSVFRNKIFDFIPTVVTTNSKNGYGSESASRKD 120

Query: 121 ASVDHLRVRLPDTYALKIQWSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRP 180
             V+++++ +      +I +   C +G+ KTY IS   +    H   D+    ++  +  
Sbjct: 121 VIVENVQISISTGSECRIIFKFLCKHGVIKTYKISYE-QTQTLHAVFDKSLSHNNFQINS 180

Query: 181 RDLNRLLSNFQSSLQERSLLLQQNQLPYLLKLQLRLKERLFELRSYIDQPKVMLHSLTAD 240
           + L  L  +F    +E ++   Q ++     L     E +   R  + QP          
Sbjct: 181 KILKDLTEHFGQRTEELTIQPLQERV-----LLTSFTEEVVHNRDILKQP---------- 240

Query: 241 NDALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEP 300
                 T + ID  +EF   +   + V +T  ++E +A +   E     I  ++   G+P
Sbjct: 241 ----TQTTVSIDG-KEFERVA-LNEGVSVTLSLREFRAAVILAEALGSSICAYYGVPGKP 300

Query: 301 ILLAPKFGLDDGSGTNFDATLVLATMLVS 302
           ILL        G  +  +A  +LAT++ S
Sbjct: 301 ILLT----FAKGKNSEIEAQFILATVVGS 303

[Close]

BLAST of Carg23293 vs. ExPASy TrEMBL
Match: A0A6J1FGA2 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443913 PE=3 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 6.7e-228
Identity = 417/468 (89.10%), Postives = 429/468 (91.67%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEF LSGNALK FARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT
Sbjct: 1   MEFNLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           YAISGNQ  +QCS         AVCSVLRTSIASVDHLRV+LPDTYALKIQWSLECFNGI
Sbjct: 61  YAISGNQ--VQCSV-----LLKAVCSVLRTSIASVDHLRVQLPDTYALKIQWSLECFNGI 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLL-LQQNQLP 180
           KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQE +++  +   LP
Sbjct: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLP 180

Query: 181 YLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPV 240
              +  + ++ +  ELRSYID         T DNDALLHTQLWIDPMEEFVHYSHSGDPV
Sbjct: 181 --SEAAIEIEGKAVELRSYIDP--------TKDNDALLHTQLWIDPMEEFVHYSHSGDPV 240

Query: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300
           DITFGV+ELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML
Sbjct: 241 DITFGVRELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300

Query: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360
           VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR
Sbjct: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360

Query: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420
           SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAG AQGYNLVDRARDHSVGRDLGREHQ
Sbjct: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGYAQGYNLVDRARDHSVGRDLGREHQ 420

Query: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
           ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH
Sbjct: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Carg23293 vs. ExPASy TrEMBL
Match: A0A6J1HRT1 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465538 PE=3 SV=1)

HSP 1 Score: 794.7 bits (2051), Expect = 2.1e-226
Identity = 415/468 (88.68%), Postives = 426/468 (91.03%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEF LSGNALK FARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           YAISGNQ  +QCS         AVCSVLRTS+ASVDHLRVRLPDTYALKIQWSLECFNGI
Sbjct: 61  YAISGNQ--VQCSV-----LLKAVCSVLRTSMASVDHLRVRLPDTYALKIQWSLECFNGI 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLL-LQQNQLP 180
           KKTYCIS NVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQE +++  +   LP
Sbjct: 121 KKTYCISSNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITVIATEPTSLP 180

Query: 181 YLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPV 240
              +  + ++ +  ELRSYID         T DNDALLHTQLWIDPMEEFVHYSHSGDPV
Sbjct: 181 --SEAAIEIEGKAVELRSYIDP--------TKDNDALLHTQLWIDPMEEFVHYSHSGDPV 240

Query: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300
           DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML
Sbjct: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300

Query: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360
           VSQLHAGSRSQPPQEATTGQGESDHR GSQ QQDGPGANVSGHPSDHTRIWSELSGSAPR
Sbjct: 301 VSQLHAGSRSQPPQEATTGQGESDHRTGSQAQQDGPGANVSGHPSDHTRIWSELSGSAPR 360

Query: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420
           SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVG DLGREHQ
Sbjct: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGGDLGREHQ 420

Query: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
           ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH
Sbjct: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 451

[Close]

BLAST of Carg23293 vs. ExPASy TrEMBL
Match: A0A6J1FBG3 (cell cycle checkpoint control protein RAD9A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443913 PE=3 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 3.7e-210
Identity = 385/434 (88.71%), Postives = 397/434 (91.47%), Query Frame = 0


Query: 35  QLAFYTLNASRSAYQAITFEPGFFDTYAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIAS 94
           QLAFYTLNASRSAYQAITFEPGFFDTYAISGNQ  +QCS         AVCSVLRTSIAS
Sbjct: 19  QLAFYTLNASRSAYQAITFEPGFFDTYAISGNQ--VQCSV-----LLKAVCSVLRTSIAS 78

Query: 95  VDHLRVRLPDTYALKIQWSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRD 154
           VDHLRV+LPDTYALKIQWSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRD
Sbjct: 79  VDHLRVQLPDTYALKIQWSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRD 138

Query: 155 LNRLLSNFQSSLQERSLL-LQQNQLPYLLKLQLRLKERLFELRSYIDQPKVMLHSLTADN 214
           LNRLLSNFQSSLQE +++  +   LP   +  + ++ +  ELRSYID         T DN
Sbjct: 139 LNRLLSNFQSSLQEITVIATEPTSLP--SEAAIEIEGKAVELRSYIDP--------TKDN 198

Query: 215 DALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPI 274
           DALLHTQLWIDPMEEFVHYSHSGDPVDITFGV+ELKAFLSFCEGCEVDIHLFFEKAGEPI
Sbjct: 199 DALLHTQLWIDPMEEFVHYSHSGDPVDITFGVRELKAFLSFCEGCEVDIHLFFEKAGEPI 258

Query: 275 LLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQD 334
           LLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQD
Sbjct: 259 LLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQD 318

Query: 335 GPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKA 394
           GPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKA
Sbjct: 319 GPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKA 378

Query: 395 GCAQGYNLVDRARDHSVGRDLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDN 454
           G AQGYNLVDRARDHSVGRDLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDN
Sbjct: 379 GYAQGYNLVDRARDHSVGRDLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDN 435

Query: 455 ELCVQSTPPYYEEH 468
           ELCVQSTPPYYEEH
Sbjct: 439 ELCVQSTPPYYEEH 435

[Close]

BLAST of Carg23293 vs. ExPASy TrEMBL
Match: A0A6J1HPJ7 (cell cycle checkpoint control protein RAD9A isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465538 PE=3 SV=1)

HSP 1 Score: 735.3 bits (1897), Expect = 1.5e-208
Identity = 383/434 (88.25%), Postives = 394/434 (90.78%), Query Frame = 0


Query: 35  QLAFYTLNASRSAYQAITFEPGFFDTYAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIAS 94
           QLAFYTLNASRSAYQAITFEPGFFDTYAISGNQ  +QCS         AVCSVLRTS+AS
Sbjct: 19  QLAFYTLNASRSAYQAITFEPGFFDTYAISGNQ--VQCSV-----LLKAVCSVLRTSMAS 78

Query: 95  VDHLRVRLPDTYALKIQWSLECFNGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRD 154
           VDHLRVRLPDTYALKIQWSLECFNGIKKTYCIS NVEPDIQHLSLDRRQFPSDLVVRPRD
Sbjct: 79  VDHLRVRLPDTYALKIQWSLECFNGIKKTYCISSNVEPDIQHLSLDRRQFPSDLVVRPRD 138

Query: 155 LNRLLSNFQSSLQERSLL-LQQNQLPYLLKLQLRLKERLFELRSYIDQPKVMLHSLTADN 214
           LNRLLSNFQSSLQE +++  +   LP   +  + ++ +  ELRSYID         T DN
Sbjct: 139 LNRLLSNFQSSLQEITVIATEPTSLP--SEAAIEIEGKAVELRSYIDP--------TKDN 198

Query: 215 DALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPI 274
           DALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPI
Sbjct: 199 DALLHTQLWIDPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPI 258

Query: 275 LLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQD 334
           LLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHR GSQ QQD
Sbjct: 259 LLAPKFGLDDGSGTNFDATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRTGSQAQQD 318

Query: 335 GPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKA 394
           GPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKA
Sbjct: 319 GPGANVSGHPSDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKA 378

Query: 395 GCAQGYNLVDRARDHSVGRDLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDN 454
           GCAQGYNLVDRARDHSVG DLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDN
Sbjct: 379 GCAQGYNLVDRARDHSVGGDLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDN 435

Query: 455 ELCVQSTPPYYEEH 468
           ELCVQSTPPYYEEH
Sbjct: 439 ELCVQSTPPYYEEH 435

[Close]

BLAST of Carg23293 vs. ExPASy TrEMBL
Match: A0A6J1DBU1 (cell cycle checkpoint control protein RAD9A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018877 PE=3 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.8e-202
Identity = 373/467 (79.87%), Postives = 398/467 (85.22%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           MEF LSGNALK FARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFD 
Sbjct: 1   MEFSLSGNALKTFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDA 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           Y +SGNQ  +QCS         AVCSVLRT IAS+DHLRV+LPD  +LK+QWSL+CFNG+
Sbjct: 61  YVVSGNQ--VQCSV-----LLKAVCSVLRTPIASIDHLRVQLPDPDSLKVQWSLKCFNGM 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLL-LQQNQLP 180
            KTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQE +++  +   LP
Sbjct: 121 NKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQEITIIATEPTSLP 180

Query: 181 YLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPV 240
              +    ++ +  ELRSYID         T DNDALLHTQLWIDPMEEFVHYSHSGDPV
Sbjct: 181 --SEAASEIEGKAVELRSYIDP--------TKDNDALLHTQLWIDPMEEFVHYSHSGDPV 240

Query: 241 DITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATML 300
           DITFGVKELKAFLSFCE CEVDIHL+FEKAGEPIL+APKFGLDDGSG+NFD TLVLATML
Sbjct: 241 DITFGVKELKAFLSFCECCEVDIHLYFEKAGEPILMAPKFGLDDGSGSNFDVTLVLATML 300

Query: 301 VSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPR 360
           VSQLH GSR+Q PQEA T  GESDHR  SQPQQDG  ANVSGHPSDHTRIWSELSGSAPR
Sbjct: 301 VSQLHVGSRAQLPQEAATEHGESDHRTASQPQQDGSRANVSGHPSDHTRIWSELSGSAPR 360

Query: 361 SGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAGCAQGYNLVDRARDHSVGRDLGREHQ 420
           SGN AEGQVQG+ NLSS EQMEIQRIS +QIS AGCAQ  NLVDR  D+ +G+D GRE Q
Sbjct: 361 SGNAAEGQVQGERNLSSCEQMEIQRISTMQISNAGCAQANNLVDRTSDNPMGKDRGRERQ 420

Query: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEE 467
           ERSDINGPAVSQHHPSNWVDEEDEDDD DDGDDNELCVQSTPPYYEE
Sbjct: 421 ERSDINGPAVSQHHPSNWVDEEDEDDDKDDGDDNELCVQSTPPYYEE 450

[Close]

BLAST of Carg23293 vs. TAIR 10
Match: AT3G05480.1 (cell cycle checkpoint control protein family )

HSP 1 Score: 460.7 bits (1184), Expect = 1.4e-129
Identity = 251/474 (52.95%), Postives = 326/474 (68.78%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           ME  +SGNALK  +RS+ CLAR+GNELV+QASP+QLA +TLNASRSAYQ ITF+  FFD 
Sbjct: 1   MELSISGNALKTLSRSIICLARVGNELVVQASPTQLALHTLNASRSAYQCITFQSSFFDV 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           Y +SG Q+      +       AVCSVLRT +AS+DH+ V+LPD  A K++W+L+C++G+
Sbjct: 61  YTVSGPQAHFSVLLK-------AVCSVLRTPLASIDHMSVQLPDHDASKVKWTLQCYSGM 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLLLQQNQLPY 180
           KKTY I+CNVEPDIQHLSLDR +FPS LV+ PR+L++LL NFQSSLQE + ++  +Q  +
Sbjct: 121 KKTYWITCNVEPDIQHLSLDRGRFPSTLVMHPRNLSKLLGNFQSSLQEIT-IIATDQTSF 180

Query: 181 LLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPVD 240
                  +  +  E RSY+D         T D D+LLHTQLWIDP EEF+ Y+H+GDPVD
Sbjct: 181 PSDAASEIGGKAVEFRSYVDP--------TKDGDSLLHTQLWIDPSEEFLQYTHAGDPVD 240

Query: 241 ITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLV 300
           ITF +KELKAFL+FCEGCE DIHLFFEKAGEPIL+APKFGL DGS ++FDATLVLATMLV
Sbjct: 241 ITFSLKELKAFLAFCEGCEADIHLFFEKAGEPILMAPKFGLGDGSSSSFDATLVLATMLV 300

Query: 301 SQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRS 360
           SQL  G  ++PP+ A +  G +  + GS+PQ+     N S HPSDHTR+WSELSG+A +S
Sbjct: 301 SQLQEGIPAEPPEAANSTGGHAAEQVGSRPQERS-RQNASEHPSDHTRVWSELSGTATKS 360

Query: 361 GNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAG-------CAQGYNLVDRARDHSVGRD 420
            NG E + Q Q        ++I RI N++ISK G        A   +      DH+ G  
Sbjct: 361 VNGTEDRPQAQ----GQPDLDIHRIRNMEISKGGPVGDTAPAAPPKSQRPTQIDHAEG-- 420

Query: 421 LGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
                  R  +   + SQHHPSNWVD  +E++D+D+G      V++TPP+ E++
Sbjct: 421 ------SRVRVQNQSFSQHHPSNWVDANEEEEDDDEG------VEATPPHNEDY 439

[Close]

BLAST of Carg23293 vs. TAIR 10
Match: AT3G05480.3 (cell cycle checkpoint control protein family )

HSP 1 Score: 449.5 bits (1155), Expect = 3.3e-126
Identity = 251/491 (51.12%), Postives = 325/491 (66.19%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           ME  +SGNALK  +RS+ CLAR+GNELV+QASP+QLA +TLNASRSAYQ ITF+  FFD 
Sbjct: 1   MELSISGNALKTLSRSIICLARVGNELVVQASPTQLALHTLNASRSAYQCITFQSSFFDV 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECF--- 120
           Y +SG Q+      +       AVCSVLRT +AS+DH+ V+LPD  A K++W+L+C+   
Sbjct: 61  YTVSGPQAHFSVLLK-------AVCSVLRTPLASIDHMSVQLPDHDASKVKWTLQCYSAV 120

Query: 121 --------------NGIKKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQ 180
                         N +KKTY I+CNVEPDIQHLSLDR +FPS LV+ PR+L++LL NFQ
Sbjct: 121 LCKNLDVACFRPVHNSMKKTYWITCNVEPDIQHLSLDRGRFPSTLVMHPRNLSKLLGNFQ 180

Query: 181 SSLQERSLLLQQNQLPYLLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWI 240
           SSLQE + ++  +Q  +       +  +  E RSY+D         T D D+LLHTQLWI
Sbjct: 181 SSLQEIT-IIATDQTSFPSDAASEIGGKAVEFRSYVDP--------TKDGDSLLHTQLWI 240

Query: 241 DPMEEFVHYSHSGDPVDITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDD 300
           DP EEF+ Y+H+GDPVDITF +KELKAFL+FCEGCE DIHLFFEKAGEPIL+APKFGL D
Sbjct: 241 DPSEEFLQYTHAGDPVDITFSLKELKAFLAFCEGCEADIHLFFEKAGEPILMAPKFGLGD 300

Query: 301 GSGTNFDATLVLATMLVSQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHP 360
           GS ++FDATLVLATMLVSQL  G  ++PP+ A +  G +  + GS+PQ+     N S HP
Sbjct: 301 GSSSSFDATLVLATMLVSQLQEGIPAEPPEAANSTGGHAAEQVGSRPQERS-RQNASEHP 360

Query: 361 SDHTRIWSELSGSAPRSGNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAG-------CA 420
           SDHTR+WSELSG+A +S NG E + Q Q        ++I RI N++ISK G        A
Sbjct: 361 SDHTRVWSELSGTATKSVNGTEDRPQAQ----GQPDLDIHRIRNMEISKGGPVGDTAPAA 420

Query: 421 QGYNLVDRARDHSVGRDLGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELC 468
              +      DH+ G         R  +   + SQHHPSNWVD  +E++D+D+G      
Sbjct: 421 PPKSQRPTQIDHAEG--------SRVRVQNQSFSQHHPSNWVDANEEEEDDDEG------ 456

[Close]

BLAST of Carg23293 vs. TAIR 10
Match: AT3G05480.2 (cell cycle checkpoint control protein family )

HSP 1 Score: 379.0 bits (972), Expect = 5.4e-105
Identity = 222/474 (46.84%), Postives = 300/474 (63.29%), Query Frame = 0


Query: 1   MEFILSGNALKDFARSVTCLARIGNELVIQASPSQLAFYTLNASRSAYQAITFEPGFFDT 60
           ME  +SGNALK  +RS+ CLAR+GNELV+QASP+QLA +TLNASRSAYQ ITF+  FFD 
Sbjct: 1   MELSISGNALKTLSRSIICLARVGNELVVQASPTQLALHTLNASRSAYQCITFQSSFFDV 60

Query: 61  YAISGNQSAMQCSFEGMHDSCAAVCSVLRTSIASVDHLRVRLPDTYALKIQWSLECFNGI 120
           Y +SG Q+      +       AVCSVLRT +AS+DH+ V+LPD  A K++W+L+C++G+
Sbjct: 61  YTVSGPQAHFSVLLK-------AVCSVLRTPLASIDHMSVQLPDHDASKVKWTLQCYSGM 120

Query: 121 KKTYCISCNVEPDIQHLSLDRRQFPSDLVVRPRDLNRLLSNFQSSLQERSLLLQQNQLPY 180
           KKTY I+CNVEPDIQHLSLDR +FPS LV+ PR+L++LL NFQSSLQE + ++  +Q  +
Sbjct: 121 KKTYWITCNVEPDIQHLSLDRGRFPSTLVMHPRNLSKLLGNFQSSLQEIT-IIATDQTSF 180

Query: 181 LLKLQLRLKERLFELRSYIDQPKVMLHSLTADNDALLHTQLWIDPMEEFVHYSHSGDPVD 240
                  +  +  E RSY+D         T D D+LLHTQLWIDP EEF+ Y+H+   + 
Sbjct: 181 PSDAASEIGGKAVEFRSYVDP--------TKDGDSLLHTQLWIDPSEEFLQYTHAVTILS 240

Query: 241 ITFGVKELKAFLSFCEGCEVDIHLFFEKAGEPILLAPKFGLDDGSGTNFDATLVLATMLV 300
           +T               C    +++F     PIL+APKFGL DGS ++FDATLVLATMLV
Sbjct: 241 VT--------------ECH---NMYF--VARPILMAPKFGLGDGSSSSFDATLVLATMLV 300

Query: 301 SQLHAGSRSQPPQEATTGQGESDHRAGSQPQQDGPGANVSGHPSDHTRIWSELSGSAPRS 360
           SQL  G  ++PP+ A +  G +  + GS+PQ+     N S HPSDHTR+WSELSG+A +S
Sbjct: 301 SQLQEGIPAEPPEAANSTGGHAAEQVGSRPQERS-RQNASEHPSDHTRVWSELSGTATKS 360

Query: 361 GNGAEGQVQGQSNLSSSEQMEIQRISNVQISKAG-------CAQGYNLVDRARDHSVGRD 420
            NG E + Q Q        ++I RI N++ISK G        A   +      DH+ G  
Sbjct: 361 VNGTEDRPQAQ----GQPDLDIHRIRNMEISKGGPVGDTAPAAPPKSQRPTQIDHAEG-- 420

Query: 421 LGREHQERSDINGPAVSQHHPSNWVDEEDEDDDNDDGDDNELCVQSTPPYYEEH 468
                  R  +   + SQHHPSNWVD  +E++D+D+G      V++TPP+ E++
Sbjct: 421 ------SRVRVQNQSFSQHHPSNWVDANEEEEDDDEG------VEATPPHNEDY 420

The following BLAST results are available for this feature:

BLAST of Carg23293 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021084.1	2.6e-266	100.00	Cell cycle checkpoint control protein RAD9B [Cucurbita argyrosperma subsp. argyr...	[more]
XP_023537430.1	8.6e-230	89.74	cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita pepo subsp. pe...	[more]
KAG6586248.1	7.3e-229	89.32	Cell cycle checkpoint control protein RAD9A, partial [Cucurbita argyrosperma sub...	[more]
XP_022937528.1	1.4e-227	89.10	cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_022965728.1	4.4e-226	88.68	cell cycle checkpoint control protein RAD9A isoform X1 [Cucurbita maxima] >XP_02...	[more]

BLAST of Carg23293 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6WBX8	3.1e-12	25.43	Cell cycle checkpoint control protein RAD9B OS=Homo sapiens OX=9606 GN=RAD9B PE=...	[more]
Q5E9X8	1.9e-09	23.95	Cell cycle checkpoint control protein RAD9B OS=Bos taurus OX=9913 GN=RAD9B PE=2 ...	[more]
P26306	1.3e-07	21.28	DNA repair protein rad9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) O...	[more]

BLAST of Carg23293 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGA2	6.7e-228	89.10	cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1HRT1	2.1e-226	88.68	cell cycle checkpoint control protein RAD9A isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1FBG3	3.7e-210	88.71	cell cycle checkpoint control protein RAD9A isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1HPJ7	1.5e-208	88.25	cell cycle checkpoint control protein RAD9A isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1DBU1	4.8e-202	79.87	cell cycle checkpoint control protein RAD9A isoform X1 OS=Momordica charantia OX...	[more]

BLAST of Carg23293 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05480.1	1.4e-129	52.95	cell cycle checkpoint control protein family	[more]
AT3G05480.3	3.3e-126	51.12	cell cycle checkpoint control protein family	[more]
AT3G05480.2	5.4e-105	46.84	cell cycle checkpoint control protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026584	Rad9	PIRSF	PIRSF009303	RAD9	coord: 1..465 e-value: 7.6E-83 score: 276.8
None	No IPR available	GENE3D	3.70.10.10		coord: 2..298 e-value: 3.5E-61 score: 208.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 410..467
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..453
None	No IPR available	PANTHER	PTHR15237:SF0	CELL CYCLE CHECKPOINT CONTROL PROTEIN	coord: 1..463
None	No IPR available	SUPERFAMILY	55979	DNA clamp	coord: 9..257
IPR007268	Rad9/Ddc1	PFAM	PF04139	Rad9	coord: 13..298 e-value: 1.4E-61 score: 208.2
IPR007268	Rad9/Ddc1	PANTHER	PTHR15237	DNA REPAIR PROTEIN RAD9	coord: 1..463

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23293-RA	Carg23293-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000077	DNA damage checkpoint signaling
biological_process	GO:0006281	DNA repair
cellular_component	GO:0030896	checkpoint clamp complex