Carg23233 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg23233
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionregulator of nonsense transcripts 1 homolog
LocationCarg_Chr16: 8821283 .. 8831874 (+)
RNA-Seq ExpressionCarg23233
SyntenyCarg23233
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATACTATGATTTTAGGTCCGGGCAAAACATAAAGAAGTTTGTCTTCACAAAGATAGTCCTCTGGGAGAAACAATTCTCGAGTGTTACAATTGTGGGTGCCGAAATGTATTCCTCCTTGGATTTATTTCTGCAAAGACAGAAAGTGTGGTTGTTCTACTCTGTAGGGAACCTTGCTTGAGTGTAAATGCTCTTAAGGATATGAATTGGGACTTGAGTCAGTGGTGCCCTCTAATCGATGATAGGTGCTTTTTGCAGTGGCTGGTTAAGGTTTGTGTATCTTGCTGTAGAATCTATATCTCTGATATGTGGTAATATGTAACGCATTGTCACTGTCCTACGAACATTTTGGTTTGTAGATTCCTTCTGAGCAAGAGCAGTTGAGGGCACGGCAAATTAGTGCCCAACAAATAAATAAAATTGAGGAACTTTGGAAGACAAACCCAGATGCATCTCTTGAAGATCTTGAAAAACCTGGTGTGGATGATGAACCACAGCCCGTAGCATTAAAATATGAAGATGCTTATCAGGTGTGCTTGTTGTATCTAACCTTTAGTTAATAGCAATCCTGGTGAAGTTTCATTTTTCTTTGATGCATGTATATTGACAAGGTGGCATTTTGTCTTTCCTATTGCAGTATCAAAATGTATTTGCACCTCTTATCAAGCTTGAAGCCGACTACGATAAAGTATTGTACCAAGACTCCTTATCTCATTTGCCTTTCTCTTTTTCTTCTTATTTTTTAAAGGAAAATACTTCCAGTAGGTCTGGCAATATCTAACTTCATGACCCCATAATGGTAGATTTTCCTGTTTTTTTTCCTTAAATGAATGATGTAATATTAATTTTTCATTTAAAGACCTGTATAATATGATTCTCCATTTTTGTATTAGATGATGAAAGAATCTCAAAGCAAGGATAATGTGACTGTACGTTGGGACATTGGTCTTAACAAGAAGAGAATAGCTTATTTTGTCTTCCCAAAGGTACTGATGGTATTTATTATTTGTTAAATGGATGCTTTATTTTGCCTTTTTTTTCTTGATTTTTAAGCTGCTTGATTTGTTGGTATAGGAGGACAATGAGTTGCGTCTTGTACCCGGAGATGAGTTGAGGTTACGCTATTCTGGTGATGCAGCTCATCCAGCTTGGCATTCTGTTGGACATGTGGTATGTCTCTTTATGTTTTTAATTTTATGAGAAAATGAAAGAATTAATAATGGTGTACAAAAATTCAGCCCAACGAAAAGATTCCCTCAAGTAGGCGTGGGTTTGAAATCTTAGATTGGGGGGGGGGGGGGGGGGGGCGGTGCCTAGATGAATACTGCTCCACATTTTTCTTAATTTTCTAATGGACAATTCGTATTTTTCAAAATAGTGAACAGTGAGGTGCTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGAATAACATGTCTGACATTTTAGTGATTATTATGCCTTAAAAAACTGAATTGTCTCACTTGAGTTGGTAATTAATTGTATTGGCATAAACTTGTTCTGCTGTGTTAGATCAAGTTAACTGCACAGGAAGAGGTTGCACTCGAGCTACGTGCTAGCCAGGTAGCACTCAGTTTTGATGGTTATATTTATTTGCTGGGTTAAGTCGTTTGTTAGTGACTATTTTATATTATGGTACATAGGGGGTTCCAGTTGATGTGGTCCATGGTTTTAGTGTTGATTTTGTGTGGAAGAGTACTAGTTTCGACCGAATGCAGGGAGCTATGAAGACATTTGCTGTTGATGAGACCAGTGTTAGTGGGTAAGAACTGTCTGCACTGTATGGATCAAGAAGTTAATTTCTATCAGGATCAATGTGCCTTCTTTATGATCCAACATTCTTGAATAACCCGTCCCCACTTTAATAAATGTGCTACAGAGATTGTATTTATAATAAGAAATGCTGCTTGATATATGTATTTCAACTAGCTATGACAATGCATGTTCTTATGTGCAGTTATATCTACCATCACTTATTAGGACACGAAGTGGAGGTTCAGATGGTTCGCAATACACTTCCACGTCGTTTTGGTGCTCCTGGTCTCCCAGAACTCAATGCATCTCAAGTATGCAACTAGTCTTAGAAATAAAATGCATCATGCTTATTTGTTCGGATTTGAAATTTCGATGTCATATTGAGTTTGTTGAAATATACGTGTATTGATTATCAAGGAACAATATAATTTGGTTCTTGTTTTAATGCTGTTGGAGTTTACCTTGGGGGTGGTCTTGTTGTCGTATGGAATGATTTGTAATGAGTTCTGGTTTTCTCTTCTTCAATATGTTAATATCCTCTTGATGATGGAATGTACTCTATTTTTTGTTTATAGAAAAAAGCAATTGCTTTACACGGGGTTTGCAAAGTATAGAGGCCTTTCTTTTCCTTTTGAGATCTGCACACTTCTTAAGAGCAGTGAATGAGCTTGTTAATTTCGTGCATTCTGATTTTTGACTAAAAGCCTTATGCTCTTTTGTCGAACTAAGCTTTTATTAAAGAGAACAATGTCTTAAGATCTCTTGTCCTTTTACAACATTTCATAGTTATAGTGACTATTATTGTTTCCGCTAATGAAAGTTGGATCTATTCCAGGTTTCGAGTCATGTTAATGATATAGCGGGAACTCTTACAGCCATAGTGTTTACATGTGTTTTTATGATTCTATTTGGTATTTGTTTTTATCCTTTAGGCAAGCTTAGAACAATGTCTCAAGTTCACAATTTTGGCCACATTTTTTTTATTGGAAGTTTTCTGTTTATTGGTAGGTTTTTGCTGTAAAAAGTGTTCTTCAGAAGCCAATAAGCTTGATTCAGGGCCCCCCGGGTACTGGGAAAACTGTAACTTCTGCTGCCATAGTGTATCATATGGCCAAACAAGGCCAAGGGCAGGTCTACATTTTGAATACACTCTTCTAGTTGCCTTGTTTATTTTAATATTCAGTTATCAGATTATGAACGCAAGGTCTTCTCACTCGGCAGGTGCTGGTCTGTGCCCCTAGTAATGTGGCTGTGGACCAACTGGCAGAGAAGATAAGTGCAACTGGGTTAAAGGTACAATTAGCAGTTGCTCCTCCTTGGAAACCACTTTTCCTATTATGTTTGTCAGATGTAATAGTTTATCGTTTGATATGTCTTGTGTGACCTTGTGTTGTGACTGCTGGGTTTTATTTGAGGCTATTGCAATAAAAATTGAATACCACTCACAATTTCTCACCTGCTTTTTGAATCAAGGTTGTTAGGCTATGTGCAAAATCAAGAGAAGCTGTAAGTTCTCCTGTGGAACACTTGACCCTTCACTATCAGGTATTTGATCATTGTGGATTCAAGCCTCAGCTGCAATGTGACTAAGTTCTCATTTTCATGTTTTACCTCAAAGTTTGATAGATTAAAACTCTTAATAGGTTCGACATCTTGACACATCGGAAAGAAGTGAACTTCATAAGTTGCAACAATTGAAAGATGAACAAGGTATGGGTTTCTTTGTATTTTAAATGAGAAATCATTTTTGTAACTAATATTCTTATTACGGGATTTTGCATCCTCTGATTTCTCTGAAATGCTTTTGTCCGTGAAATATCAAATAGTTGCATCTCTTTTTAAGCTTCAGTTCCTTCTTGGCTGCTTTTCTATCTCATGAAACAGTGCGTAGTTTTGAATCCTTTTGTGATAAGTTGATATTCTTGGGACTGGGCTTGTAAGCGCGCAGTTTGATGTATGCAACACCATGTCCTTTTGGAAAGTGCTCCTTTTCCCTCTTTTTATTCTCTTTTTAACTAATGGTCCAAACAGTGTGAAGGCTACTAAAAGTGTGCTCTTTAGTCCAATTACATTTCACTTGAGGCGGGTGATTATTATTTTTGTTGGAGTACATATCTACCAAAATTATCTTTCAGCGAGTTGTTAAAAAATACTTGGTTTTTAATTATTTATTCCCAAATACCCAGACCTACGAACTGGATATATAAAATAGTGACAGTTAAACATCCTAGTTGGTGTCTGATGGACCCAACTGTTAGATTTCATAACATCGATGAAAAATCTGTTTCTTATGGAAAAAATGATGGGCCAAAATGTTTGCACTGTTCTCTATCTAACTTGACAGTTAACGAAGGGAGTCTGAAAATTACATGTCGTTGAAAGCCTGAAAGAGGCTTCAAAAGGAATGGTACATTAAATACCATCGTCGCCTGTCTAATTATTGCAATGGCTGTATTTTATTCCTTAGCGTATTTCTTGGCGAGTAGTTGTATTAGCTAGTGTTAGCACTATTTCTCTTGCTCCATTTAAGATTTAGGTGCTAGTTTGTTGTTTAATAGCAGTCTCATTGTTTAATCATCACAGGGGAGCTGTCTAGCAGTGATGAGAAAAAATATAAAGCCCTTAAGAGAGCAACAGAGAGGGAAATTTCCCAGAGTGCAGATGTTATTTGTTGCACATGTGTCGGTGCTGGAGATCCTCGCCTGTCAAATTTTAGATTTCGCCAGGTTAGAGCAGTCGTCTCTGTTGTTATACTAATGTGAAATTGAAAATAACTTAAAAACTTAAAAGATTTTACCTTGGTTTAGGTTCTTATCGATGAGTCTACTCAGGCAACAGAACCTGAATGTCTTATTCCTCTTGTTCTTGGAGCAAAGCAGGCATGTCGAGTTTTCAATTCACGGATGTCATCTATTTAAATTGTGCTTCCTTTCTCCTACTGACTTTTTCTTGTTTTAGGCTGTTCTTGTTGGTGACCATTGCCAACTGGGACCTGTCATTATGTGCAAAAAAGCAGCACGTGCAGGGCTGGCTCAATCCCTTTTTGAACGTCTTGTTCTTCTTGGTGTGAAGCCAATTAGATTGCAGGTATTTGGTTTTTTTTACTTGCATATGATTCAAGGGACGTATGAAATAATACCACTTAAATTTTATTTCTATTTTGACATCAATCGAGAAAAGTTTCCAATCTTAGAATGTTACGACTCATTCTTCTGTTTCAGTGCTGGATAATTAGAATAGTCTTTTCTTATATTATATGTAGCATATTTCCCCCTGTTGGAAACATTTTTTGTTGGTTGAATAACACTTCAGCGCTTGCTAAATTTAGAAAAAGTGACCACTGTGATCAGGCTCCAATTGGAACTTCCTTTTAGCTAAATTTATTTTTCAGATAGATGTGTATTCTGAGGTGATTGCCTTTTTGCGATTCTTTGGGATATATAAGTACCGAGAGTCCTTATGATAAAGTTTGGGATGTGGATCACTTTAATCTTCATTATGGACCATGGTCCACACGACAATATTTCTGTAATCATTTTTTTTCCAATTCTAGTTCTTGGAGCCTTTTGTTCTTAGTGCCCCTAGGTAGTGGTTTTGGTTTGCGTTTCTGTAGGACCTCGTTTGGTTTCTCTTGCATTGTTCTTAATGAAAGCCGTTTATTAGGCTAAAAGAACGGATTCCACGATTCAGGCCTTGTGGATGATGGAGTTGGTTTAGTAAAAGTAAAAAAGAAATAATTAGCGGTGGAAGGAACTTTGTCTTTCAATTTTCTAGATTTGTTTTCTTTTTTTGGGTTAGTGACCACCCTCCAAAATATTCAGCAAACGTGCTGATCCTTCCCTCCAAAACCCCCCTTCAAAGAAAATTTCCAAGAATATTACTTCTCAATCTTGCTATCTTATGCACTCTGAATCTTACTAACCATTGTTTACAACCAAACACCATGCGTTGGCCTGAACACACAAAAAGGACCACTTTAAGAAGGGGATTCCTAAGGCTACTATTATTGTGCACCATGATATCCGTCTGACAGGTTCTAAGCTAGAATTTGAAGAAAGAGAAGAAGTATGTGGTGGTTTTAGAAGGAATTAAATTAAGCCAGATCATTCCGTTTTTTTTTTTCTGACGAGTTTGTTTTGATCCATCTTGATAACTTCTTAAAAATTCTCTCATTTTGGGATTCCATAATTTGAAGGAATAGGGAGTCTCCTGATGAATTCTTTGAGTTGCTTTATTTTATTTCCTGGCCTGTAATTTACGTACGTACTAGAATCCAAGGAGTTTTCATTTTTTTTTAACTCTGCTTCTGGTATTTTACCTTTATTTTATATCTAGTCTTATTTTTACTATTAAAATAGTAAAGCACATCTAATTGTATCAGAATGTTGATGATATGTTCTCCTTTCTCTTTTATTGTAGGTCCAATATCGTATGCACCCATCCCTTTCTGAATTTCCTTCCAACAGCTTCTATGAGGGCACACTACAAAATGGAGTTACAATCAATGAAAGGCAATCGACAGGCATCGACTTTCCATGGCCAGTTCCCAACCGTCCAATGTTCTTCTATGTTCAGGTATTAATGGATTCACGTATCTTTTAGAATTTGAATAGCAGAATAAAGAAAAAGGATCCTCCAGGGATGGTGGGGTTGTCCTAGTTTTGAAGCTACAAACCAATCTCTAATTATAAAGGAGATTAGTCTTAGCACTCTTGAAAGGAGGAGCCCATGCTCTGAGTTTTGAGATGTACACGTTCAAAGAAAACTTGAATTGTATGCAACGTATATTCAGTTTCAAAGCTTTTAAATGTATCTTCTTTGGAATAATCATCAATTGGACATTTTGAATATATATTCTGTCGTGAAAAAAAAAGAATGAATTTCAGTTTTGACATAGCTTATGTTATGCTAACTTGCCCCATGTGTATGGTGTTTCCAAGTAGTCTTCAGTTTTGCTTGCATTCATGTTCTCAATTTTAACATCGAACATTTTTTAGATGGGACAAGAGGAGATAAGTGCCAGTGGAACTTCCTACCTAAATAGGACCGAGGCAGCAAATGTAGAAAAAATTGTGACCACTTTCTTAAGAAGTGGTGTAGTCCCTAGTCAGGTACAATATAGTTGTCATCTTCGGTTGTCAGGATGATATTTTCCTTCTTTTTTTTTTAATATATGTTATTATCCTGTTTGCTACAGATTGGAGTTATTACACCATATGAGGGTCAACGAGCTTACATTGTGAACTATATGTCAAGAAATGGTGCTCTCAGACAGCAACTTTACAAGGAAATTGAGGTAATGCTTATAAAGAGTTTGTGGATGTCCTCGTTACTAGCTGCTGCAATTCTGCACTCTTTCTGTTGACAGGTTGCAAGTGTGGATTCATTTCAAGGAAGGGAAAAAGATTACATCATATTGTCATGCGTAAGGAGTAACGAACATCAGGTGGGTTACATTTTCAGGTGTAGTTACTGTCTTTTTCAAGCTTTTTTAACTATCTATCACCGATTCACTTGAAAATTTAAAAGTGTACCCTTTCTGATGCTGTACATATATCCTAGAAAGCAAAGGCTAGAGTTTAAGGTGTTGGACATTTTAATTGCCTTGTGCAGTAACTATTTTGTTTGTTAACCTTTTCATTTCCTTTTCAAATAAGGTTATCATTTTGGAGTAACTGGTAAAACCTGTTCCTTTTAGGGCATTGGATTCCTTAACGATCCTCGCAGGCTCAATGTGGCTTTAACACGAGCTCGATATGGTATTGTCATTCTTGGAAACCCAAAGGTTTTGAGTAAACAACCTCTGTGGAATAGCTTGTTGACACATTACAAGGTATTTTGTGCTCAAGTAGAATATTTATATGGATTTTCAGTGAGTTGTGACCTTCTGATACAATATATTTGAAGCTGAGATCCCTGATTTATTATGATATATTTTTATTTCCCGATGAAAGTTCATTCTTATAAAATAAAAGTGTGATAATTTTTCATCTTTCATCTAAGCTAAGTATTTGCTGTATTTCTGGCTTACTTCACTATCAATGTCCGGCAGGAACATGAATGCTTGGTTGAGGGTCCTTTGAATAACTTGAAACAAAGCATGATTCAGTTTCAGAAGCCTAAAAAGGTAGACCACTGGATGAACAGGGGGTGGGGGGACTTTTAAATTGATTGTTCTTCGCTGATTATTTTTATGCTTCAGATATACAATGATCGGCGTCTTTTCTTTGCTGGTGGGCCTGGAGTTGTCCCCAATGATAATTTTGGGCCTGTTGCCCCATCTGGTCCCAATGCTGATAGAAGAAGTAGTCGTGGTAGAGGTATGTTTTTTCCCCGGATATTCTACAATGTTCATAAGTTCCCAACTTCGTTTTGCGGAAGTGGTTCTTAAGGATGCATATGCTGCTTATGGCTCATTTCATGACCACGTAGATTGATCATGCCCTTCCTCAAATCTCCTAATTCAGGTTCGTACTTTCCTCCTCACCTGCCGAATGGTGCGCAAAAGCCTGGAGTGCATGCATCTGGTTATCCCATGCCACGAGTTCCTCTTCCCTCGTTTCATGGTGGTCCCCCGCATCCATATGGAATTCCAACTCGTGGAGCTGTACATGGACCAGTTGGTGCTGTTCCTCATGTTCCTCAACCAGGAAGTAGAGGTTTTGGGGCAGGGCGGGGAAATGTTGGTGCTCCTATTGGTAGTCAGCTTCCAAATCAACAAGGCTCTCAACAAAATATTGGAAATCTTGGCTCCACTTTTAACTTTCCTGGTTTGGAGAGTCCCAATAGCCAACCATCAGTGGGTGGTCCGTTGTCGCAGCTTGGGTTTGTTAACAATGTGTGTATTCTCTGTCCCTTCTCAGTATCCGTCTTGAGGGTTACCTTACTAAAAGTATCTTCGTTTGTTCAACCAATAGATGCCTGTTCAGCCGCCTACTCAAACATTTCGTGATGGATACTCCATGGGAGGAATTTCTCAGGTACTTAATTGGTGTATAATATGCTTAGTTTTGCTATATTTGTCCTTAATCCACTTTTCTAAAGCAATTTTGATGATTAATCAGGACTTCTTGGGCGATGACTTTAAAAGCCAGGGATCACATGTTCCATACAATGTTACTGATTTCTCCACTCAGGTACTTTTCTGCAAGAATGTAATTCGTGATTGCTAGCACTAGTGCCCAAGTTTAATTTTAATGATATAAGTCAGATGCTTAAGGTGAAGATATAGAGCAATCGATACTAGAAATTATTTGCTCTATTTTTCTGAAGTAACAAGTTTGAACATTCTCATGTTTCAAGGCACGTTTAGGCATATCTTATTTTTTTTGTGTCATACTCTCTTTTGGTTTATTTGTAGGCCTCTCAAACTGGATATCCCATTGATTATGTTAGTCAAGGAGCACAGGGTGGCTTTCCAGGGAGCTTCCTGAACCAGAATTCTCAATCGGGATATAACCGTTTTGGAACAGGAAATGATTTCATGTCGCAGGTTTTATACTACTCTTTTGCTTTCCTTGACTTGATTTCTGAAGTTTCCATTGGCATTTAACCTCCATCTGTCTCACAGGACTACATGAACCATGGTTCACAAGGTTTATTTACTCAAGTTGGTTTCAGCGATCCCTCACTAGATGAAGCCTCCCAAAGTCACTATAACGTGACAAATACAAACTCACTACAGTCTCAGGTTTCTCTTAATGCTCAGTAGATTTGATAGTTTATCGTCAAGTTTTACTGAATGATAGGGTGTGGGAACAATTGGCTTGTTATAGCTTCTCACATATATTACCATCAAGTGGGGGGTGGGGGGTCAATTCGATACGACTTAACGCCAACTGTTGCATTTTAATCCTTCGGTTATATTTTCTCCATTTTTGTTTTTGTTTTTTTGTTTTTTTTTTTGTTGCTGAATAAAGAATAATAATTGTACATCAGGGCATGATGAATTCTCTCTACTCCCAGCCCTTTGCACATTACAATACACAGCCTTCGACCCAGCAGGCCCCACCACAGCAGCAGCAGCCTCAGCAGGGCCAAAGCTCTCAAAATCAGAAAATTCACTTTAGTGGTTGAAAGAGTGTAGGATTCACGGCGGTGATGGGTAGTCTTTGCATCCGGCAACTTGGTGTGCTATCTGTATGCAACTGTCTGCCTCTTGATTGCAAGTTTGCCATTTTCTGGTCAATATGATTGTTCTATCCTCGACCATTGTTGGTAACATGGGATTTGGCAATCTACTAATACTCAAGAGTGGACAGAAGACGGAAGTGCTGTCTTTCAGCAAAACAAGGGCGGCACATCCAGGGCTGAGAAAGAAAAGATAACCCATATTCCTGCTTGAGGTTTTGTGTTAATGAATAAAACTACCAATGTTATTTTGTGCAATGGAGCACTGCATGGCACGGTTTCGGCAAAAGGGTTCCATAATACGTAGGATCGGCTACATTTTGTGTGATATAACCCTGGCAACTGATTCATTTGAAAAAAAAAAAAAAAAAAAACAATACAGAAGCAGCAGTCAAATGGACATTTTTGTACAGCAGCAGCTGGTGAAAGTTGCCTTATCTCATCCCTTCACCTCCCCGTGACATGTACCTGTACTCTGCTTTATCATTTCATCAAGTAGAGGATGGCTATAGACTATAGGAAGTATTTATATAATTTTCTTTTGCTTAGTGAGTGCTGCTACTACCCCATACAGGAATGAATGTATTTTGATATGGTATATATCTTTTGGTCTTGTTAGGATATATTATATCAGACTCAGCTCTATTGTGAAGTTGCCATGTTTAATGCCATTTTGTTTGCTTTA

mRNA sequence

CATACTATGATTTTAGGTCCGGGCAAAACATAAAGAAGTTTGTCTTCACAAAGATAGTCCTCTGGGAGAAACAATTCTCGAGTGTTACAATTGTGGGTGCCGAAATGTATTCCTCCTTGGATTTATTTCTGCAAAGACAGAAAGTGTGGTTGTTCTACTCTGTAGGGAACCTTGCTTGAGTGTAAATGCTCTTAAGGATATGAATTGGGACTTGAGTCAGTGGTGCCCTCTAATCGATGATAGGTGCTTTTTGCAGTGGCTGGTTAAGATTCCTTCTGAGCAAGAGCAGTTGAGGGCACGGCAAATTAGTGCCCAACAAATAAATAAAATTGAGGAACTTTGGAAGACAAACCCAGATGCATCTCTTGAAGATCTTGAAAAACCTGGTGTGGATGATGAACCACAGCCCGTAGCATTAAAATATGAAGATGCTTATCAGTATCAAAATGTATTTGCACCTCTTATCAAGCTTGAAGCCGACTACGATAAAATGATGAAAGAATCTCAAAGCAAGGATAATGTGACTGTACGTTGGGACATTGGTCTTAACAAGAAGAGAATAGCTTATTTTGTCTTCCCAAAGGAGGACAATGAGTTGCGTCTTGTACCCGGAGATGAGTTGAGGTTACGCTATTCTGGTGATGCAGCTCATCCAGCTTGGCATTCTGTTGGACATGTGATCAAGTTAACTGCACAGGAAGAGGTTGCACTCGAGCTACGTGCTAGCCAGGGGGTTCCAGTTGATGTGGTCCATGGTTTTAGTGTTGATTTTGTGTGGAAGAGTACTAGTTTCGACCGAATGCAGGGAGCTATGAAGACATTTGCTGTTGATGAGACCAGTGTTAGTGGTTATATCTACCATCACTTATTAGGACACGAAGTGGAGGTTCAGATGGTTCGCAATACACTTCCACGTCGTTTTGGTGCTCCTGGTCTCCCAGAACTCAATGCATCTCAAGTTTTTGCTGTAAAAAGTGTTCTTCAGAAGCCAATAAGCTTGATTCAGGGCCCCCCGGGTACTGGGAAAACTGTAACTTCTGCTGCCATAGTGTATCATATGGCCAAACAAGGCCAAGGGCAGGTGCTGGTCTGTGCCCCTAGTAATGTGGCTGTGGACCAACTGGCAGAGAAGATAAGTGCAACTGGGTTAAAGGTTGTTAGGCTATGTGCAAAATCAAGAGAAGCTGTAAGTTCTCCTGTGGAACACTTGACCCTTCACTATCAGGTTCGACATCTTGACACATCGGAAAGAAGTGAACTTCATAAGTTGCAACAATTGAAAGATGAACAAGGGGAGCTGTCTAGCAGTGATGAGAAAAAATATAAAGCCCTTAAGAGAGCAACAGAGAGGGAAATTTCCCAGAGTGCAGATGTTATTTGTTGCACATGTGTCGGTGCTGGAGATCCTCGCCTGTCAAATTTTAGATTTCGCCAGGTTCTTATCGATGAGTCTACTCAGGCAACAGAACCTGAATGTCTTATTCCTCTTGTTCTTGGAGCAAAGCAGGCATGTCGAGCTGTTCTTGTTGGTGACCATTGCCAACTGGGACCTGTCATTATGTGCAAAAAAGCAGCACGTGCAGGGCTGGCTCAATCCCTTTTTGAACGTCTTGTTCTTCTTGGTGTGAAGCCAATTAGATTGCAGGTCCAATATCGTATGCACCCATCCCTTTCTGAATTTCCTTCCAACAGCTTCTATGAGGGCACACTACAAAATGGAGTTACAATCAATGAAAGGCAATCGACAGGCATCGACTTTCCATGGCCAGTTCCCAACCGTCCAATGTTCTTCTATGTTCAGATGGGACAAGAGGAGATAAGTGCCAGTGGAACTTCCTACCTAAATAGGACCGAGGCAGCAAATGTAGAAAAAATTGTGACCACTTTCTTAAGAAGTGGTGTAGTCCCTAGTCAGATTGGAGTTATTACACCATATGAGGGTCAACGAGCTTACATTGTGAACTATATGTCAAGAAATGGTGCTCTCAGACAGCAACTTTACAAGGAAATTGAGGTTGCAAGTGTGGATTCATTTCAAGGAAGGGAAAAAGATTACATCATATTGTCATGCGTAAGGAGTAACGAACATCAGGGCATTGGATTCCTTAACGATCCTCGCAGGCTCAATGTGGCTTTAACACGAGCTCGATATGGTATTGTCATTCTTGGAAACCCAAAGGTTTTGAGTAAACAACCTCTGTGGAATAGCTTGTTGACACATTACAAGGAACATGAATGCTTGGTTGAGGGTCCTTTGAATAACTTGAAACAAAGCATGATTCAGTTTCAGAAGCCTAAAAAGATATACAATGATCGGCGTCTTTTCTTTGCTGGTGGGCCTGGAGTTGTCCCCAATGATAATTTTGGGCCTGTTGCCCCATCTGGTCCCAATGCTGATAGAAGAAGTAGTCGTGGTAGAGGTTCGTACTTTCCTCCTCACCTGCCGAATGGTGCGCAAAAGCCTGGAGTGCATGCATCTGGTTATCCCATGCCACGAGTTCCTCTTCCCTCGTTTCATGGTGGTCCCCCGCATCCATATGGAATTCCAACTCGTGGAGCTGTACATGGACCAGTTGGTGCTGTTCCTCATGTTCCTCAACCAGGAAGTAGAGGTTTTGGGGCAGGGCGGGGAAATGTTGGTGCTCCTATTGGTAGTCAGCTTCCAAATCAACAAGGCTCTCAACAAAATATTGGAAATCTTGGCTCCACTTTTAACTTTCCTGGTTTGGAGAGTCCCAATAGCCAACCATCAGTGGGTGGTCCGTTGTCGCAGCTTGGGTTTGTTAACAATATGCCTGTTCAGCCGCCTACTCAAACATTTCGTGATGGATACTCCATGGGAGGAATTTCTCAGGACTTCTTGGGCGATGACTTTAAAAGCCAGGGATCACATGTTCCATACAATGTTACTGATTTCTCCACTCAGGCCTCTCAAACTGGATATCCCATTGATTATGTTAGTCAAGGAGCACAGGGTGGCTTTCCAGGGAGCTTCCTGAACCAGAATTCTCAATCGGGATATAACCGTTTTGGAACAGGAAATGATTTCATGTCGCAGGACTACATGAACCATGGTTCACAAGGTTTATTTACTCAAGTTGGTTTCAGCGATCCCTCACTAGATGAAGCCTCCCAAAGTCACTATAACGTGACAAATACAAACTCACTACAGTCTCAGGGCATGATGAATTCTCTCTACTCCCAGCCCTTTGCACATTACAATACACAGCCTTCGACCCAGCAGGCCCCACCACAGCAGCAGCAGCCTCAGCAGGGCCAAAGCTCTCAAAATCAGAAAATTCACTTTAGTGGTTGAAAGAGTGTAGGATTCACGGCGGTGATGGGTAGTCTTTGCATCCGGCAACTTGGTGTGCTATCTGTATGCAACTGTCTGCCTCTTGATTGCAAGTTTGCCATTTTCTGGTCAATATGATTGTTCTATCCTCGACCATTGTTGGTAACATGGGATTTGGCAATCTACTAATACTCAAGAGTGGACAGAAGACGGAAGTGCTGTCTTTCAGCAAAACAAGGGCGGCACATCCAGGGCTGAGAAAGAAAAGATAACCCATATTCCTGCTTGAGGTTTTGTGTTAATGAATAAAACTACCAATGTTATTTTGTGCAATGGAGCACTGCATGGCACGGTTTCGGCAAAAGGGTTCCATAATACGTAGGATCGGCTACATTTTGTGTGATATAACCCTGGCAACTGATTCATTTGAAAAAAAAAAAAAAAAAAAACAATACAGAAGCAGCAGTCAAATGGACATTTTTGTACAGCAGCAGCTGGTGAAAGTTGCCTTATCTCATCCCTTCACCTCCCCGTGACATGTACCTGTACTCTGCTTTATCATTTCATCAAGTAGAGGATGGCTATAGACTATAGGAAGTATTTATATAATTTTCTTTTGCTTAGTGAGTGCTGCTACTACCCCATACAGGAATGAATGTATTTTGATATGGTATATATCTTTTGGTCTTGTTAGGATATATTATATCAGACTCAGCTCTATTGTGAAGTTGCCATGTTTAATGCCATTTTGTTTGCTTTA

Coding sequence (CDS)

ATGAATTGGGACTTGAGTCAGTGGTGCCCTCTAATCGATGATAGGTGCTTTTTGCAGTGGCTGGTTAAGATTCCTTCTGAGCAAGAGCAGTTGAGGGCACGGCAAATTAGTGCCCAACAAATAAATAAAATTGAGGAACTTTGGAAGACAAACCCAGATGCATCTCTTGAAGATCTTGAAAAACCTGGTGTGGATGATGAACCACAGCCCGTAGCATTAAAATATGAAGATGCTTATCAGTATCAAAATGTATTTGCACCTCTTATCAAGCTTGAAGCCGACTACGATAAAATGATGAAAGAATCTCAAAGCAAGGATAATGTGACTGTACGTTGGGACATTGGTCTTAACAAGAAGAGAATAGCTTATTTTGTCTTCCCAAAGGAGGACAATGAGTTGCGTCTTGTACCCGGAGATGAGTTGAGGTTACGCTATTCTGGTGATGCAGCTCATCCAGCTTGGCATTCTGTTGGACATGTGATCAAGTTAACTGCACAGGAAGAGGTTGCACTCGAGCTACGTGCTAGCCAGGGGGTTCCAGTTGATGTGGTCCATGGTTTTAGTGTTGATTTTGTGTGGAAGAGTACTAGTTTCGACCGAATGCAGGGAGCTATGAAGACATTTGCTGTTGATGAGACCAGTGTTAGTGGTTATATCTACCATCACTTATTAGGACACGAAGTGGAGGTTCAGATGGTTCGCAATACACTTCCACGTCGTTTTGGTGCTCCTGGTCTCCCAGAACTCAATGCATCTCAAGTTTTTGCTGTAAAAAGTGTTCTTCAGAAGCCAATAAGCTTGATTCAGGGCCCCCCGGGTACTGGGAAAACTGTAACTTCTGCTGCCATAGTGTATCATATGGCCAAACAAGGCCAAGGGCAGGTGCTGGTCTGTGCCCCTAGTAATGTGGCTGTGGACCAACTGGCAGAGAAGATAAGTGCAACTGGGTTAAAGGTTGTTAGGCTATGTGCAAAATCAAGAGAAGCTGTAAGTTCTCCTGTGGAACACTTGACCCTTCACTATCAGGTTCGACATCTTGACACATCGGAAAGAAGTGAACTTCATAAGTTGCAACAATTGAAAGATGAACAAGGGGAGCTGTCTAGCAGTGATGAGAAAAAATATAAAGCCCTTAAGAGAGCAACAGAGAGGGAAATTTCCCAGAGTGCAGATGTTATTTGTTGCACATGTGTCGGTGCTGGAGATCCTCGCCTGTCAAATTTTAGATTTCGCCAGGTTCTTATCGATGAGTCTACTCAGGCAACAGAACCTGAATGTCTTATTCCTCTTGTTCTTGGAGCAAAGCAGGCATGTCGAGCTGTTCTTGTTGGTGACCATTGCCAACTGGGACCTGTCATTATGTGCAAAAAAGCAGCACGTGCAGGGCTGGCTCAATCCCTTTTTGAACGTCTTGTTCTTCTTGGTGTGAAGCCAATTAGATTGCAGGTCCAATATCGTATGCACCCATCCCTTTCTGAATTTCCTTCCAACAGCTTCTATGAGGGCACACTACAAAATGGAGTTACAATCAATGAAAGGCAATCGACAGGCATCGACTTTCCATGGCCAGTTCCCAACCGTCCAATGTTCTTCTATGTTCAGATGGGACAAGAGGAGATAAGTGCCAGTGGAACTTCCTACCTAAATAGGACCGAGGCAGCAAATGTAGAAAAAATTGTGACCACTTTCTTAAGAAGTGGTGTAGTCCCTAGTCAGATTGGAGTTATTACACCATATGAGGGTCAACGAGCTTACATTGTGAACTATATGTCAAGAAATGGTGCTCTCAGACAGCAACTTTACAAGGAAATTGAGGTTGCAAGTGTGGATTCATTTCAAGGAAGGGAAAAAGATTACATCATATTGTCATGCGTAAGGAGTAACGAACATCAGGGCATTGGATTCCTTAACGATCCTCGCAGGCTCAATGTGGCTTTAACACGAGCTCGATATGGTATTGTCATTCTTGGAAACCCAAAGGTTTTGAGTAAACAACCTCTGTGGAATAGCTTGTTGACACATTACAAGGAACATGAATGCTTGGTTGAGGGTCCTTTGAATAACTTGAAACAAAGCATGATTCAGTTTCAGAAGCCTAAAAAGATATACAATGATCGGCGTCTTTTCTTTGCTGGTGGGCCTGGAGTTGTCCCCAATGATAATTTTGGGCCTGTTGCCCCATCTGGTCCCAATGCTGATAGAAGAAGTAGTCGTGGTAGAGGTTCGTACTTTCCTCCTCACCTGCCGAATGGTGCGCAAAAGCCTGGAGTGCATGCATCTGGTTATCCCATGCCACGAGTTCCTCTTCCCTCGTTTCATGGTGGTCCCCCGCATCCATATGGAATTCCAACTCGTGGAGCTGTACATGGACCAGTTGGTGCTGTTCCTCATGTTCCTCAACCAGGAAGTAGAGGTTTTGGGGCAGGGCGGGGAAATGTTGGTGCTCCTATTGGTAGTCAGCTTCCAAATCAACAAGGCTCTCAACAAAATATTGGAAATCTTGGCTCCACTTTTAACTTTCCTGGTTTGGAGAGTCCCAATAGCCAACCATCAGTGGGTGGTCCGTTGTCGCAGCTTGGGTTTGTTAACAATATGCCTGTTCAGCCGCCTACTCAAACATTTCGTGATGGATACTCCATGGGAGGAATTTCTCAGGACTTCTTGGGCGATGACTTTAAAAGCCAGGGATCACATGTTCCATACAATGTTACTGATTTCTCCACTCAGGCCTCTCAAACTGGATATCCCATTGATTATGTTAGTCAAGGAGCACAGGGTGGCTTTCCAGGGAGCTTCCTGAACCAGAATTCTCAATCGGGATATAACCGTTTTGGAACAGGAAATGATTTCATGTCGCAGGACTACATGAACCATGGTTCACAAGGTTTATTTACTCAAGTTGGTTTCAGCGATCCCTCACTAGATGAAGCCTCCCAAAGTCACTATAACGTGACAAATACAAACTCACTACAGTCTCAGGGCATGATGAATTCTCTCTACTCCCAGCCCTTTGCACATTACAATACACAGCCTTCGACCCAGCAGGCCCCACCACAGCAGCAGCAGCCTCAGCAGGGCCAAAGCTCTCAAAATCAGAAAATTCACTTTAGTGGTTGA

Protein sequence

MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPNDNFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPYGIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNFPGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVPYNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGSQGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQQQPQQGQSSQNQKIHFSG
Homology
[Close]
BLAST of Carg23233 vs. NCBI nr
Match: KAG7015680.1 (Regulator of nonsense transcripts 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2081.2 bits (5391), Expect = 0.0e+00
Identity = 1038/1038 (100.00%), Postives = 1038/1038 (100.00%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP
Sbjct: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY
Sbjct: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
            GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS
Sbjct: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ
Sbjct: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1021 QQPQQGQSSQNQKIHFSG 1038

[Close]
BLAST of Carg23233 vs. NCBI nr
Match: KAG6577641.1 (Regulator of nonsense transcripts 1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2069.3 bits (5360), Expect = 0.0e+00
Identity = 1035/1038 (99.71%), Postives = 1035/1038 (99.71%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY
Sbjct: 955  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
            GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 1015 GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ
Sbjct: 1195 QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1254

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQPQQGQSSQNQKIHFSG 1269

[Close]
BLAST of Carg23233 vs. NCBI nr
Match: XP_023553136.1 (regulator of nonsense transcripts 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2067.4 bits (5355), Expect = 0.0e+00
Identity = 1034/1038 (99.61%), Postives = 1034/1038 (99.61%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQS GIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSAGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY
Sbjct: 955  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
            GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 1015 GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ
Sbjct: 1195 QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1254

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQPQQGQSSQNQKIHFSG 1269

[Close]
BLAST of Carg23233 vs. NCBI nr
Match: XP_022923405.1 (regulator of nonsense transcripts 1 homolog [Cucurbita moschata] >XP_022923406.1 regulator of nonsense transcripts 1 homolog [Cucurbita moschata])

HSP 1 Score: 2063.9 bits (5346), Expect = 0.0e+00
Identity = 1032/1038 (99.42%), Postives = 1035/1038 (99.71%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAW+SVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWYSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            NFGPVAPSGP+ADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY
Sbjct: 955  NFGPVAPSGPSADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
            GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 1015 GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLDE+SQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ
Sbjct: 1195 QGLFTQVGFSDPSLDESSQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1254

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQPQQGQSSQNQKIHFSG 1269

[Close]
BLAST of Carg23233 vs. NCBI nr
Match: XP_023007671.1 (regulator of nonsense transcripts 1 homolog [Cucurbita maxima])

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1031/1038 (99.33%), Postives = 1032/1038 (99.42%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            N GPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY
Sbjct: 955  NLGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
            GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 1015 GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLDEA QSHYNVTNTNSLQSQGMMNSLYSQPFAHYN+QPSTQQAPP Q
Sbjct: 1195 QGLFTQVGFSDPSLDEAFQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNSQPSTQQAPP-Q 1254

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQPQQGQSSQNQKIHFSG 1268

[Close]
BLAST of Carg23233 vs. ExPASy Swiss-Prot
Match: Q9FJR0 (Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana OX=3702 GN=UPF1 PE=1 SV=2)

HSP 1 Score: 1694.5 bits (4387), Expect = 0.0e+00
Identity = 867/1041 (83.29%), Postives = 921/1041 (88.47%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINKIEELWKTNPDA+LEDLE
Sbjct: 241  MNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEELWKTNPDATLEDLE 300

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPV  KYEDAYQYQNVFAPLIKLEADYDKMMKESQSK+N+TVRWDIGLNKKR
Sbjct: 301  KPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKENLTVRWDIGLNKKR 360

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            +AYFVFPKE+NELRLVPGDELRLRYSGDA HP+W SVGHVIKLTAQEEVALELRA+QGVP
Sbjct: 361  VAYFVFPKEENELRLVPGDELRLRYSGDAVHPSWQSVGHVIKLTAQEEVALELRANQGVP 420

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            +DV HGFSVDFVWKSTSFDRMQGAMK FAVDETSVSGYIYH LLGHEVE QMVRNTLPRR
Sbjct: 421  IDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRR 480

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FG PGLPELNASQV AVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 481  FGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 540

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE+LTLHYQVRHLDTSE+SELHKLQQL
Sbjct: 541  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELHKLQQL 600

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYK LKRATEREI+QSADVICCTCVGA D RLSNFRFRQVLIDESTQ
Sbjct: 601  KDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQVLIDESTQ 660

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLG KQ    VLVGDHCQLGPVIMCKKAARAGLAQSLFERLV LG+KPIR
Sbjct: 661  ATEPECLIPLVLGVKQ---VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIKPIR 720

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHP+LSEFPSNSFYEGTLQNGVTI ERQ+TGIDFPWPVPNRPMFFYVQ+GQEEI
Sbjct: 721  LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEI 780

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEK+VT FL+SGVVPSQIGVITPYEGQRAYIVNYM+RNG+LRQQL
Sbjct: 781  SASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQL 840

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 841  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 900

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWN LLTHYKEHECLVEGPLNNLKQSM+QFQKP+KIYNDRRLF+ GG G++ ND
Sbjct: 901  VLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRKIYNDRRLFYGGGAGMIGND 960

Query: 721  NFGPVAPSGPNADRRSSRGR--GSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPP- 780
            NFG      PNADRR SRGR  GSY P   PNGA +PG+H +GYP+PRVPL  F GGPP 
Sbjct: 961  NFG---SGNPNADRRGSRGRAGGSYLPSGPPNGA-RPGLHPAGYPIPRVPLSPFPGGPPS 1020

Query: 781  HPYGIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGST 840
             PY IPTR    GPVGAVPH PQPG+ GFGAGR   G  +G  LP+QQ +Q N+G +G +
Sbjct: 1021 QPYAIPTR----GPVGAVPHAPQPGNHGFGAGR---GTSVGGHLPHQQATQHNVGTIGPS 1080

Query: 841  FNFPGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGS 900
             NFP L+SPNSQPS GGPLSQ G+         +Q FRDG+SMGGISQDFL DD KSQGS
Sbjct: 1081 LNFP-LDSPNSQPSPGGPLSQPGY--------GSQAFRDGFSMGGISQDFLADDIKSQGS 1140

Query: 901  HVPYNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMN 960
            H PYN+ DF+TQAS  G+ +DY +QGA G FPG+F+NQNSQ GY+RF   NDFMSQ+YM 
Sbjct: 1141 HDPYNMADFATQASPGGFAVDYATQGAHGAFPGNFMNQNSQGGYSRFSGINDFMSQEYMA 1200

Query: 961  HGSQGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAP 1020
            HG QGLFTQ GF D S D+  Q+ Y V N N LQSQG+ NSLYSQPFAHYNTQP     P
Sbjct: 1201 HGGQGLFTQAGFIDSSQDDGQQNPYGVNNPN-LQSQGLPNSLYSQPFAHYNTQPLNLSGP 1254

Query: 1021 PQQQQPQQGQSSQNQKIHFSG 1039
               QQ Q  QSSQN K  ++G
Sbjct: 1261 ---QQSQPNQSSQNPKHPYNG 1254

[Close]
BLAST of Carg23233 vs. ExPASy Swiss-Prot
Match: Q92900 (Regulator of nonsense transcripts 1 OS=Homo sapiens OX=9606 GN=UPF1 PE=1 SV=2)

HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 574/930 (61.72%), Postives = 685/930 (73.66%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            +NWD SQW PLI DRCFL WLVKIPSEQEQLRARQI+AQQINK+EELWK NP A+LEDLE
Sbjct: 222  INWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLE 281

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVD+EPQ V L+YEDAYQYQN+F PL+KLEADYDK +KESQ++DN+TVRWD+GLNKKR
Sbjct: 282  KPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKR 341

Query: 121  IAYFVFPKEDN-----------ELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQ--E 180
            IAYF  PK D+           ++RL+ GDE+ LRY GD A P W  +GHVIK+     +
Sbjct: 342  IAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLA-PLWKGIGHVIKVPDNYGD 401

Query: 181  EVALELRASQGVPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHE 240
            E+A+ELR+S G PV+V H F VDFVWKSTSFDRMQ A+KTFAVDETSVSGYIYH LLGHE
Sbjct: 402  EIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHE 461

Query: 241  VEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHM 300
            VE  +++  LP+RF A GLP+LN SQV+AVK+VLQ+P+SLIQGPPGTGKTVTSA IVYH+
Sbjct: 462  VEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHL 521

Query: 301  AKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLD 360
            A+QG G VLVCAPSN+AVDQL EKI  TGLKVVRLCAKSREA+ SPV  L LH Q+R++D
Sbjct: 522  ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 581

Query: 361  TSERSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSN 420
            +    EL KLQQLKDE GELSS+DEK+Y+ALKR  ERE+  +ADVICCTCVGAGDPRL+ 
Sbjct: 582  S--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAK 641

Query: 421  FRFRQVLIDESTQATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSL 480
             +FR +LIDESTQATEPEC++P+VLGAKQ    +LVGDHCQLGPV+MCKKAA+AGL+QSL
Sbjct: 642  MQFRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSL 701

Query: 481  FERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNR 540
            FERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT  +R   G DF WP P++
Sbjct: 702  FERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDK 761

Query: 541  PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 600
            PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  L++G  P QIG+ITPYEGQR+Y+V
Sbjct: 762  PMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLV 821

Query: 601  NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 660
             YM  +G+L  +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRLNVALT
Sbjct: 822  QYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALT 881

Query: 661  RARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYND-- 720
            RARYG++I+GNPK LSKQPLWN LL +YKE + LVEGPLNNL++S++QF KP+K+ N   
Sbjct: 882  RARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTIN 941

Query: 721  ------RRLFFAGGPGVVPNDNFGPVAPSGPNADRRSSRGRGS--YFPPHLPNGAQKPG- 780
                      +     ++P   +            RSS+GR S  YF  H   G    G 
Sbjct: 942  PGARFMTTAMYDAREAIIPGSVYD-----------RSSQGRPSSMYFQTHDQIGMISAGP 1001

Query: 781  --VHASGYP------MPRVPLPSFHGGPPHPYGIPTRGAVHGPVGAVPHVPQPGSRGFGA 840
              V A   P      MP +P P + G    P     RG   G  G          RG G 
Sbjct: 1002 SHVAAMNIPIPFNLVMPPMPPPGYFGQANGP--AAGRGTPKGKTG----------RG-GR 1061

Query: 841  GRGNVGAPIGSQ--LPNQQGSQQNIGNLGSTFNFPGLESPNSQPSVGGPLSQLGFVNNMP 896
             +   G P  SQ  LPN Q SQ                   SQP   G L+Q G+++   
Sbjct: 1062 QKNRFGLPGPSQTNLPNSQASQ----------------DVASQPFSQGALTQ-GYIS--- 1101

[Close]
BLAST of Carg23233 vs. ExPASy Swiss-Prot
Match: Q9EPU0 (Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 569/924 (61.58%), Postives = 685/924 (74.13%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            +NWD SQW PLI DRCFL WLVKIPSEQEQLRARQI+AQQINK+EELWK NP A+LEDLE
Sbjct: 217  INWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKENPSATLEDLE 276

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVD+EPQ V L+YEDAYQYQN+F PL+KLEADYDK +KESQ++DN+TVRWD+GLNKKR
Sbjct: 277  KPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKR 336

Query: 121  IAYFVFPKEDN-----------ELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQ--E 180
            IA+F  PK D+           ++RL+ GDE+ LRY GD A P W  +GHVIK+     +
Sbjct: 337  IAFFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGDLA-PLWKGIGHVIKVPDNYGD 396

Query: 181  EVALELRASQGVPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHE 240
            E+A+ELR+S G PV+V H F VDFVWKSTSFDRMQ A+KTFAVDETSVSGYIYH LLGHE
Sbjct: 397  EIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHE 456

Query: 241  VEVQMVRNTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHM 300
            VE  +++  LP+RF A GLP+LN SQV+AVK+VLQ+P+SLIQGPPGTGKTVTSA IVYH+
Sbjct: 457  VEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHL 516

Query: 301  AKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLD 360
            A+QG G VLVCAPSN+AVDQL EKI  TGLKVVRLCAKSREA+ SPV  L LH Q+R++D
Sbjct: 517  ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 576

Query: 361  TSERSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSN 420
            +    EL KLQQLKDE GELSS+DEK+Y+ALKR  ERE+  +ADVICCTCVGAGDPRL+ 
Sbjct: 577  S--MPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAK 636

Query: 421  FRFRQVLIDESTQATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSL 480
             +FR +LIDESTQATEPEC++P+VLGAKQ    +LVGDHCQLGPV+MCKKAA+AGL+QSL
Sbjct: 637  MQFRSILIDESTQATEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAAKAGLSQSL 696

Query: 481  FERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNR 540
            FERLV+LG++PIRLQVQYRMHP+LS FPSN FYEG+LQNGVT  +R   G DF WP P++
Sbjct: 697  FERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDK 756

Query: 541  PMFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIV 600
            PMFFYV  GQEEI++SGTSYLNRTEAANVEKI T  L++G  P QIG+ITPYEGQR+Y+V
Sbjct: 757  PMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLV 816

Query: 601  NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 660
             YM  +G+L  +LY+E+E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRLNVALT
Sbjct: 817  QYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALT 876

Query: 661  RARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYND-- 720
            RARYG++I+GNPK LSKQPLWN LL++YKE + LVEGPLNNL++S++QF KP+K+ N   
Sbjct: 877  RARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALVEGPLNNLRESLMQFSKPRKLVNTVN 936

Query: 721  ------RRLFFAGGPGVVPNDNFGPVAPSGPNADRRSSRGRGS--YFPPHLPNGAQKPG- 780
                      +     ++P   +            RSS+GR S  YF  H        G 
Sbjct: 937  PGARFMTTAMYDAREAIIPGSVYD-----------RSSQGRPSNMYFQTHDQISMISAGP 996

Query: 781  --VHASGYPMP-RVPLPSFHGGPPHPYGIPTRGAVHGP-VGAVPHVPQPGSRGFGAGRGN 840
              V A   P+P  + +P     PP  Y     G  +GP  G      + G  G    R  
Sbjct: 997  SHVAAMNIPIPFNLVMPPM---PPPGY----FGQANGPAAGRGTPKTKTGRGGRQKNRFG 1056

Query: 841  VGAPIGSQLPNQQGSQQNIGNLGSTFNFPGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQ 896
            +  P  + LPN Q SQ                   SQP   G L+Q G+V+   +  P+Q
Sbjct: 1057 LPGPSQTTLPNSQASQ----------------DVASQPFSQGALTQ-GYVS---MSQPSQ 1096

[Close]
BLAST of Carg23233 vs. ExPASy Swiss-Prot
Match: Q98TR3 (Putative regulator of nonsense transcripts 1 OS=Takifugu rubripes OX=31033 GN=rent1 PE=3 SV=1)

HSP 1 Score: 1018.1 bits (2631), Expect = 7.2e-296
Identity = 522/806 (64.76%), Postives = 628/806 (77.92%), Query Frame = 0 

Query: 1   MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
           +NWD SQW PLI DRCFL WLVKIPSEQEQLRARQI+AQQINK+EELWK NP A+LEDLE
Sbjct: 204 INWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELWKDNPCATLEDLE 263

Query: 61  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
           KPGVD+EPQ V L+YEDAYQYQN+F PL+KLEADYDK +KESQ++DN+TVRWD+GLNKKR
Sbjct: 264 KPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWDLGLNKKR 323

Query: 121 IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKL--TAQEEVALELRASQG 180
           IAYF  PK D+++RL+ GDE+ LRY GD A P W  +GHVIK+  +  +E+A+ELR S G
Sbjct: 324 IAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIGHVIKVPDSYGDEIAIELRTSVG 383

Query: 181 VPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLP 240
            PV++ H + VDFVWKSTSFDRMQ A+KTFAVDETSVSGYIYH LLGHEVE   ++  LP
Sbjct: 384 APVEIPHNYQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVTIKCQLP 443

Query: 241 RRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVC 300
           +RF A GLP+LN SQV+AVK+VLQ+P+SLIQGPPGTGKTVTSA IVYH+++QG G VLVC
Sbjct: 444 KRFTANGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVC 503

Query: 301 APSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQ 360
           APSN+AVDQL EKI  TGLKVVRLCAKSREA+ SPV  L LH Q+ ++D+    EL KLQ
Sbjct: 504 APSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSFLALHNQISNMDS--MPELQKLQ 563

Query: 361 QLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDES 420
           QLKDE GELSS+DEK+Y+ALKR  ERE+  +ADVI CTCV AGDPRL+  +FR +LIDES
Sbjct: 564 QLKDETGELSSADEKRYRALKRTAERELLMNADVIWCTCVRAGDPRLAKMQFRSILIDES 623

Query: 421 TQATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKP 480
           TQATEP+C+ P+ LGAKQ    +++G+       +MCKKAA+AGL+QSLFERLV+LG++P
Sbjct: 624 TQATEPKCIGPVELGAKQ----LILGEITASWSCVMCKKAAKAGLSQSLFERLVVLGIRP 683

Query: 481 IRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQE 540
           IRLQVQYRMHP+LS FPSN FYEG+LQNGVT  +R   G DF WP P +PMFFYV  GQE
Sbjct: 684 IRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAGDRIKKGFDFQWPQPEKPMFFYVTQGQE 743

Query: 541 EISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQ 600
           EI++SGTSYLNRTEAANVEKI T  L++G  P QIG+ITPYEGQR+Y+V YM  +G+L  
Sbjct: 744 EIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHT 803

Query: 601 QLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGN 660
           +LY ++E+ASVD+FQGREKD+IILSCVR+NEHQGIGFLNDPRRLNVALTRA+YG++I+GN
Sbjct: 804 KLY-QVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRAKYGVIIVGN 863

Query: 661 PKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVP 720
           PK LSKQPLWN+LL +YKE + LVEGPLNNL++S++QF KP+K+ N     F        
Sbjct: 864 PKALSKQPLWNNLLNNYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPRFMSTAMYDA 923

Query: 721 NDNFGPVAPSGPNADRRSSRGRGS--YFPPHLP---NGAQKPGVHASGYP------MPRV 780
            +   P    G   DR ++ GR S  YF  H      GA    + A   P      MP +
Sbjct: 924 REALIP----GSAYDRSNTGGRPSNMYFQTHDQIGMIGAAASHLAALNIPIPFNLVMPPM 983

Query: 781 PLPSFHGGPPHPYGIPTRGAVHGPVG 794
           P PS+ G    P     RGA+ G  G
Sbjct: 984 PPPSYQGQTNGP--AAGRGAMKGKSG 995

[Close]
BLAST of Carg23233 vs. ExPASy Swiss-Prot
Match: Q9VYS3 (Regulator of nonsense transcripts 1 homolog OS=Drosophila melanogaster OX=7227 GN=Upf1 PE=1 SV=2)

HSP 1 Score: 943.3 bits (2437), Expect = 2.2e-273
Identity = 492/844 (58.29%), Postives = 602/844 (71.33%), Query Frame = 0 

Query: 1   MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
           MNWD  QW PLI DRCFL WLVK PSEQ QLRARQISA QINK+EELWK N +A+ +DLE
Sbjct: 199 MNWDQEQWKPLIADRCFLAWLVKQPSEQGQLRARQISAAQINKLEELWKENIEATFQDLE 258

Query: 61  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
           KPG+D EP  V L+YED YQY+  F PL++LEA+YD+ +KES +++N+ VRWD+GLNKK 
Sbjct: 259 KPGIDSEPAHVLLRYEDGYQYEKTFGPLVRLEAEYDQKLKESATQENIEVRWDVGLNKKT 318

Query: 121 IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQ--EEVALELRASQG 180
           IAYF   K D++++L+ GDELRL Y G+  +P W  +GHVIK+     ++V LEL++S  
Sbjct: 319 IAYFTLAKTDSDMKLMHGDELRLHYVGELYNP-WSEIGHVIKVPDNFGDDVGLELKSSTN 378

Query: 181 VPVDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH----EVEVQMVR 240
            PV     F+VDF+WK TSFDRM  A+  FA+D  SVS +IY  LLGH      +  + R
Sbjct: 379 APVKCTSNFTVDFIWKCTSFDRMTRALCKFAIDRNSVSNFIYSRLLGHGRADSNDEVLFR 438

Query: 241 NTLPRRFGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQ 300
              P+ F AP LP+LN SQV+AVK  LQ+P+SLIQGPPGTGKTVTSA IVY + K   G 
Sbjct: 439 GPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGT 498

Query: 301 VLVCAPSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSEL 360
           VLVCAPSN AVDQL EKI  T LKVVR+CAKSREA+ SPV  L LH Q+R+++T+  SEL
Sbjct: 499 VLVCAPSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETN--SEL 558

Query: 361 HKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVL 420
            KLQQLKDE GELSS+DEK+Y+ LKRA E ++ ++ADVICCTCVGAGD RLS  +F  +L
Sbjct: 559 KKLQQLKDETGELSSADEKRYRNLKRAAENQLLEAADVICCTCVGAGDGRLSRVKFTSIL 618

Query: 421 IDESTQATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 480
           IDES Q+TEPEC++P+VLGAKQ    +LVGDHCQLGPV+MCKKAARAGL+QSLFERLV+L
Sbjct: 619 IDESMQSTEPECMVPVVLGAKQ---LILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVL 678

Query: 481 GVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQ 540
           G++P RL+VQYRMHP LS+FPSN FYEG+LQNGV   +R+   +DFPWP P RPMFF V 
Sbjct: 679 GIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRR-LKLDFPWPQPERPMFFLVT 738

Query: 541 MGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNG 600
            GQEEI+ SGTS+LNRTEAANVEKI T FL++G+ P QIG+ITPYEGQRAY+V YM   G
Sbjct: 739 QGQEEIAGSGTSFLNRTEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQG 798

Query: 601 ALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIV 660
           +L  +LY+EIE+ASVD+FQGREKD II+SCVRSNE QGIGFLNDPRRLNVALTRA++GI+
Sbjct: 799 SLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTRAKFGII 858

Query: 661 ILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGP 720
           I+GNPKVL+KQ LWN LL  YK+ + LVEG LNNLK+S+I FQKPKK+ N   +      
Sbjct: 859 IVGNPKVLAKQQLWNHLLNFYKDRKVLVEGSLNNLKESLIHFQKPKKLVNSMNIGAHFMS 918

Query: 721 GVVPNDNFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHG 780
            ++ +     V   G   DR    G+G        NG Q  G  + G P         +G
Sbjct: 919 TIIADAK--EVMVPGSIYDRSGGYGQGRQMVGQSMNGGQYGG--SGGGP---------YG 978

Query: 781 GPPHPYGIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNL 839
             P  YG P+  ++                GFG G G  GA          G   N G  
Sbjct: 979 NSPLGYGTPSSNSM---------------VGFGLGNGGNGA---------AGGNNNFGGA 998

[Close]
BLAST of Carg23233 vs. ExPASy TrEMBL
Match: A0A6J1E6Q5 (regulator of nonsense transcripts 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111431113 PE=3 SV=1)

HSP 1 Score: 2063.9 bits (5346), Expect = 0.0e+00
Identity = 1032/1038 (99.42%), Postives = 1035/1038 (99.71%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAW+SVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWYSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            NFGPVAPSGP+ADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY
Sbjct: 955  NFGPVAPSGPSADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
            GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 1015 GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLDE+SQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ
Sbjct: 1195 QGLFTQVGFSDPSLDESSQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1254

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQPQQGQSSQNQKIHFSG 1269

[Close]
BLAST of Carg23233 vs. ExPASy TrEMBL
Match: A0A6J1L187 (regulator of nonsense transcripts 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111500224 PE=3 SV=1)

HSP 1 Score: 2057.0 bits (5328), Expect = 0.0e+00
Identity = 1031/1038 (99.33%), Postives = 1032/1038 (99.42%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            N GPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY
Sbjct: 955  NLGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
            GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 1015 GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLDEA QSHYNVTNTNSLQSQGMMNSLYSQPFAHYN+QPSTQQAPP Q
Sbjct: 1195 QGLFTQVGFSDPSLDEAFQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNSQPSTQQAPP-Q 1254

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQPQQGQSSQNQKIHFSG 1268

[Close]
BLAST of Carg23233 vs. ExPASy TrEMBL
Match: A0A0A0L1C7 (Helicase ATP-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G016940 PE=3 SV=1)

HSP 1 Score: 2040.0 bits (5284), Expect = 0.0e+00
Identity = 1025/1039 (98.65%), Postives = 1026/1039 (98.75%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPP PY
Sbjct: 955  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPQPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
             IPTRGAVHGPVGAVPHVPQPGSRGFGAGRGN GAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 1015 AIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNAGAPIGSQLPNQQGSQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYV QG QGGFPGSFLNQNSQSGY+RFGTGNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYPIDYVGQGGQGGFPGSFLNQNSQSGYSRFGTGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQS-QGMMNSLYSQPFAHYNTQPSTQQAPPQ 1020
            QGLFTQVGFSDPSLDEASQSHYNVTN N LQS QGMMNSLYSQPFAHYNTQPST QAPP 
Sbjct: 1195 QGLFTQVGFSDPSLDEASQSHYNVTNANPLQSQQGMMNSLYSQPFAHYNTQPSTLQAPP- 1254

Query: 1021 QQQPQQGQSSQNQKIHFSG 1039
            QQQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQQPQQGQSSQNQKIHFSG 1269

[Close]
BLAST of Carg23233 vs. ExPASy TrEMBL
Match: A0A1S3BKE9 (LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 homolog OS=Cucumis melo OX=3656 GN=LOC103490818 PE=3 SV=1)

HSP 1 Score: 2038.1 bits (5279), Expect = 0.0e+00
Identity = 1022/1038 (98.46%), Postives = 1023/1038 (98.55%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTF RSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFXRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPP PY
Sbjct: 955  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPQPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
             IPTRGAVHGPVGAVPHVPQPGSRGFGAGRGN GAPIGSQLPNQQGSQQNIGNLGSTFNF
Sbjct: 1015 AIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNAGAPIGSQLPNQQGSQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGYPIDYV QG QGGFPGSFLNQNSQSGY+RFG GNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYPIDYVGQGGQGGFPGSFLNQNSQSGYSRFGAGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLDEASQSHYNVTN N LQSQGMMNSLYSQPFAHYNTQPST QA P Q
Sbjct: 1195 QGLFTQVGFSDPSLDEASQSHYNVTNANPLQSQGMMNSLYSQPFAHYNTQPSTLQA-PSQ 1254

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQPQQGQSSQNQKIHFSG 1268

[Close]
BLAST of Carg23233 vs. ExPASy TrEMBL
Match: A0A6J1DQJ2 (regulator of nonsense transcripts 1 homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022653 PE=3 SV=1)

HSP 1 Score: 2031.5 bits (5262), Expect = 0.0e+00
Identity = 1019/1038 (98.17%), Postives = 1025/1038 (98.75%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQW PLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE
Sbjct: 235  MNWDLSQWFPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 294

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR
Sbjct: 295  KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 354

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP
Sbjct: 355  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 414

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR
Sbjct: 415  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 474

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 475  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 534

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL
Sbjct: 535  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 594

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ
Sbjct: 595  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 654

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLGAKQ   AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR
Sbjct: 655  ATEPECLIPLVLGAKQ---AVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 714

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI
Sbjct: 715  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 774

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL
Sbjct: 775  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 834

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 835  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 894

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND
Sbjct: 895  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 954

Query: 721  NFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPHPY 780
            +FGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPP PY
Sbjct: 955  SFGPVAPSGPNADRRSSRGRGSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPPQPY 1014

Query: 781  GIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGSTFNF 840
             IPTRGAVHGPVGAVPHVPQPGSRGFGAGRGN GAPIGSQLPNQQG+QQNIGNLGSTFNF
Sbjct: 1015 AIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNAGAPIGSQLPNQQGTQQNIGNLGSTFNF 1074

Query: 841  PGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGSHVP 900
            PGLESPNSQPSVGGPLSQLGFVNNMPVQPP+QTFRDGYSMGGISQDFLGDDFKSQGSHVP
Sbjct: 1075 PGLESPNSQPSVGGPLSQLGFVNNMPVQPPSQTFRDGYSMGGISQDFLGDDFKSQGSHVP 1134

Query: 901  YNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMNHGS 960
            YNVTDFSTQASQTGY IDYVSQGAQGGFPGSFLNQNSQSGY+RFGTGNDFMSQDYMNHGS
Sbjct: 1135 YNVTDFSTQASQTGYAIDYVSQGAQGGFPGSFLNQNSQSGYSRFGTGNDFMSQDYMNHGS 1194

Query: 961  QGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAPPQQ 1020
            QGLFTQVGFSDPSLD+ASQSHYNV+N N LQSQGMMNSLYSQPFAHYNTQPST QAPP  
Sbjct: 1195 QGLFTQVGFSDPSLDDASQSHYNVSNANPLQSQGMMNSLYSQPFAHYNTQPSTLQAPP-- 1254

Query: 1021 QQPQQGQSSQNQKIHFSG 1039
            QQPQQGQSSQNQKIHFSG
Sbjct: 1255 QQPQQGQSSQNQKIHFSG 1267

[Close]
BLAST of Carg23233 vs. TAIR 10
Match: AT5G47010.1 (RNA helicase, putative )

HSP 1 Score: 1694.5 bits (4387), Expect = 0.0e+00
Identity = 867/1041 (83.29%), Postives = 921/1041 (88.47%), Query Frame = 0 

Query: 1    MNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKIEELWKTNPDASLEDLE 60
            MNWDLSQWCPLIDDRCFL WLVK+PSEQEQLRARQISAQQINKIEELWKTNPDA+LEDLE
Sbjct: 241  MNWDLSQWCPLIDDRCFLPWLVKVPSEQEQLRARQISAQQINKIEELWKTNPDATLEDLE 300

Query: 61   KPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVTVRWDIGLNKKR 120
            KPGVDDEPQPV  KYEDAYQYQNVFAPLIKLEADYDKMMKESQSK+N+TVRWDIGLNKKR
Sbjct: 301  KPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKENLTVRWDIGLNKKR 360

Query: 121  IAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWHSVGHVIKLTAQEEVALELRASQGVP 180
            +AYFVFPKE+NELRLVPGDELRLRYSGDA HP+W SVGHVIKLTAQEEVALELRA+QGVP
Sbjct: 361  VAYFVFPKEENELRLVPGDELRLRYSGDAVHPSWQSVGHVIKLTAQEEVALELRANQGVP 420

Query: 181  VDVVHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRR 240
            +DV HGFSVDFVWKSTSFDRMQGAMK FAVDETSVSGYIYH LLGHEVE QMVRNTLPRR
Sbjct: 421  IDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRR 480

Query: 241  FGAPGLPELNASQVFAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 300
            FG PGLPELNASQV AVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP
Sbjct: 481  FGVPGLPELNASQVNAVKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAP 540

Query: 301  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQL 360
            SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVE+LTLHYQVRHLDTSE+SELHKLQQL
Sbjct: 541  SNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEYLTLHYQVRHLDTSEKSELHKLQQL 600

Query: 361  KDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQ 420
            KDEQGELSSSDEKKYK LKRATEREI+QSADVICCTCVGA D RLSNFRFRQVLIDESTQ
Sbjct: 601  KDEQGELSSSDEKKYKNLKRATEREITQSADVICCTCVGAADLRLSNFRFRQVLIDESTQ 660

Query: 421  ATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIR 480
            ATEPECLIPLVLG KQ    VLVGDHCQLGPVIMCKKAARAGLAQSLFERLV LG+KPIR
Sbjct: 661  ATEPECLIPLVLGVKQ---VVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIKPIR 720

Query: 481  LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFYVQMGQEEI 540
            LQVQYRMHP+LSEFPSNSFYEGTLQNGVTI ERQ+TGIDFPWPVPNRPMFFYVQ+GQEEI
Sbjct: 721  LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVPNRPMFFYVQLGQEEI 780

Query: 541  SASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQL 600
            SASGTSYLNRTEAANVEK+VT FL+SGVVPSQIGVITPYEGQRAYIVNYM+RNG+LRQQL
Sbjct: 781  SASGTSYLNRTEAANVEKLVTAFLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQL 840

Query: 601  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 660
            YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK
Sbjct: 841  YKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPK 900

Query: 661  VLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMIQFQKPKKIYNDRRLFFAGGPGVVPND 720
            VLSKQPLWN LLTHYKEHECLVEGPLNNLKQSM+QFQKP+KIYNDRRLF+ GG G++ ND
Sbjct: 901  VLSKQPLWNGLLTHYKEHECLVEGPLNNLKQSMVQFQKPRKIYNDRRLFYGGGAGMIGND 960

Query: 721  NFGPVAPSGPNADRRSSRGR--GSYFPPHLPNGAQKPGVHASGYPMPRVPLPSFHGGPP- 780
            NFG      PNADRR SRGR  GSY P   PNGA +PG+H +GYP+PRVPL  F GGPP 
Sbjct: 961  NFG---SGNPNADRRGSRGRAGGSYLPSGPPNGA-RPGLHPAGYPIPRVPLSPFPGGPPS 1020

Query: 781  HPYGIPTRGAVHGPVGAVPHVPQPGSRGFGAGRGNVGAPIGSQLPNQQGSQQNIGNLGST 840
             PY IPTR    GPVGAVPH PQPG+ GFGAGR   G  +G  LP+QQ +Q N+G +G +
Sbjct: 1021 QPYAIPTR----GPVGAVPHAPQPGNHGFGAGR---GTSVGGHLPHQQATQHNVGTIGPS 1080

Query: 841  FNFPGLESPNSQPSVGGPLSQLGFVNNMPVQPPTQTFRDGYSMGGISQDFLGDDFKSQGS 900
             NFP L+SPNSQPS GGPLSQ G+         +Q FRDG+SMGGISQDFL DD KSQGS
Sbjct: 1081 LNFP-LDSPNSQPSPGGPLSQPGY--------GSQAFRDGFSMGGISQDFLADDIKSQGS 1140

Query: 901  HVPYNVTDFSTQASQTGYPIDYVSQGAQGGFPGSFLNQNSQSGYNRFGTGNDFMSQDYMN 960
            H PYN+ DF+TQAS  G+ +DY +QGA G FPG+F+NQNSQ GY+RF   NDFMSQ+YM 
Sbjct: 1141 HDPYNMADFATQASPGGFAVDYATQGAHGAFPGNFMNQNSQGGYSRFSGINDFMSQEYMA 1200

Query: 961  HGSQGLFTQVGFSDPSLDEASQSHYNVTNTNSLQSQGMMNSLYSQPFAHYNTQPSTQQAP 1020
            HG QGLFTQ GF D S D+  Q+ Y V N N LQSQG+ NSLYSQPFAHYNTQP     P
Sbjct: 1201 HGGQGLFTQAGFIDSSQDDGQQNPYGVNNPN-LQSQGLPNSLYSQPFAHYNTQPLNLSGP 1254

Query: 1021 PQQQQPQQGQSSQNQKIHFSG 1039
               QQ Q  QSSQN K  ++G
Sbjct: 1261 ---QQSQPNQSSQNPKHPYNG 1254

[Close]
BLAST of Carg23233 vs. TAIR 10
Match: AT2G03270.1 (DNA-binding protein, putative )

HSP 1 Score: 197.6 bits (501), Expect = 5.0e-50
Identity = 152/454 (33.48%), Postives = 231/454 (50.88%), Query Frame = 0 

Query: 249 LNASQVFAV-KSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 308
           L+ SQ  A+ K++  K + L+ GPPGTGKT T   IV    K+G  ++L CA SN+AVD 
Sbjct: 190 LDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRG-SKILACAASNIAVDN 249

Query: 309 LAEKISATGLKVVRLCAKSR---EAVSSPVEHLTLHYQVRHLDTSERSELH----KLQQL 368
           + E++    +K+VR+   +R   + + S ++   L      L    R E+     KL + 
Sbjct: 250 IVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNGKLLKA 309

Query: 369 KDE------QGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVL 428
           KD+      Q EL +  +++ K  + A   ++ ++ADVI  T  GA   +L N  F  V+
Sbjct: 310 KDKNTRRLIQKELRTLGKEERKRQQLAVS-DVIKNADVILTTLTGALTRKLDNRTFDLVI 369

Query: 429 IDESTQATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL 488
           IDE  QA E  C I L+ G+    R +L GDH QL P I   +A R GL ++LFERL  L
Sbjct: 370 IDEGAQALEVACWIALLKGS----RCILAGDHLQLPPTIQSAEAERKGLGRTLFERLADL 429

Query: 489 GVKPIR--LQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFFY 548
               I+  L VQYRMH  +  + S   Y+    N +T +   ++ + F      +     
Sbjct: 430 YGDEIKSMLTVQYRMHELIMNWSSKELYD----NKITAHSSVASHMLFDLENVTKSSSTE 489

Query: 549 VQM--------GQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRA 608
             +          EE      S  N  EA          + SGV PS IG+ITPY  Q  
Sbjct: 490 ATLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQVM 549

Query: 609 YIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNV 668
            +     R    +++  K++E+++VD FQGREK+ II+S VRSN  + +GFL D RR+NV
Sbjct: 550 LL-----RILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLKDQRRMNV 609

Query: 669 ALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEH 679
           A+TR+R    I+ + + +S       ++ +++EH
Sbjct: 610 AVTRSRRQCCIVCDTETVSSDAFLKRMIEYFEEH 628

[Close]
BLAST of Carg23233 vs. TAIR 10
Match: AT5G35970.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-49
Identity = 150/448 (33.48%), Postives = 228/448 (50.89%), Query Frame = 0 

Query: 262 QKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKISATGLKVVR 321
           ++P+ ++QGPPGTGKT     ++    +QG+ +VLV AP+N AVD + EK+   GL +VR
Sbjct: 502 KRPVMIVQGPPGTGKTGMLKEVITLAVQQGE-RVLVTAPTNAAVDNMVEKLLHLGLNIVR 561

Query: 322 LCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHK---------LQQLKDEQ-----GEL 381
           +   +R  +SS V   +L   V     S R+EL +          Q L+D+       +L
Sbjct: 562 VGNPAR--ISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLRQCLRDDVLAAGIRQL 621

Query: 382 SSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFR-FRQVLIDESTQATEPEC 441
                K  K  ++ T +EI  +A V+  T +GA DP +     F  V+IDE+ Q+ EP C
Sbjct: 622 LKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRLETFDLVVIDEAGQSIEPSC 681

Query: 442 LIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLL--GVKPIRLQVQ 501
            IP++ G     R +L GD CQL PV++ +KA   GL  SL ER   L  GV   +L  Q
Sbjct: 682 WIPILQGK----RCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQ 741

Query: 502 YRMHPSLSEFPSNSFYEGTLQNGVTINER---QSTGIDFPW-------PVPNRPMFFYVQ 561
           YRM+  ++ + S   Y G L++  ++       S  +   W        +  R  +  + 
Sbjct: 742 YRMNDVIAGWASKEMYGGWLKSAPSVASHLLIDSPFVKATWITQCPLVLLDTRMPYGSLS 801

Query: 562 MG-QEEISASGT-SYLNRTEAANVEKIVTTFLRSGVVPSQIGVITPYEGQ----RAYIVN 621
           +G +E +  +GT S  N  EA  V   V + + +GV P  I V +PY  Q    R  + +
Sbjct: 802 VGCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLDD 861

Query: 622 YMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTR 677
           +   +G         +EVA++DSFQGRE D +I+S VRSN    +GFL D RR+NVA+TR
Sbjct: 862 FPVADG---------VEVATIDSFQGREADAVIISMVRSNNLGAVGFLGDSRRMNVAITR 921

[Close]
BLAST of Carg23233 vs. TAIR 10
Match: AT1G05460.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 3.7e-45
Identity = 152/452 (33.63%), Postives = 215/452 (47.57%), Query Frame = 0 

Query: 244 PGLPELNASQVFAVKSVL---QKPISLIQGPPGTGKTVTSA-AIVYHMAKQGQGQVLVCA 303
           P  P LNA Q+ +++ VL     P  +I GPPGTGKT+T   AIV     Q   +VLVCA
Sbjct: 392 PISPALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCA 451

Query: 304 PSNVAVDQLAEKISATGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSERSELHKLQQ 363
           PSN A D + EK+         LC +      +         ++  L+ + RS     ++
Sbjct: 452 PSNSAADHILEKL---------LCLEGVRIKDN---------EIFRLNAATRS----YEE 511

Query: 364 LKDEQGELSSSDEKKYKA--LKRATEREISQSADVICCTCVGAGDPRLSNFRFRQVLIDE 423
           +K E       DE  +K   LK  T  ++  S  +        G   ++   F  +L+DE
Sbjct: 512 IKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSASLLNAEG---VNRGHFTHILLDE 571

Query: 424 STQATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGV- 483
           + QA+EPE +I +          VL GD  QLGPVI  + A   GL +S  ERL      
Sbjct: 572 AGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYY 631

Query: 484 ------KPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNR--P 543
                    +L   YR HP + + PS  FY+G L       +     ++F   +PN+  P
Sbjct: 632 CEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNF---LPNKEFP 691

Query: 544 MFFYVQMGQEEISASGTSYLNRTEAANVEKIVTTFLRSGVVPSQ-IGVITPYEGQRAYIV 603
           M FY   G +E   +  S+ NR E + V + +     +  V  + IGVITPY  Q   I 
Sbjct: 692 MVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIK 751

Query: 604 NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRS----NEHQG---IGFLNDPR 663
             + R          E++V SV+ FQG+EK  II+S VRS    NE      +GFL++PR
Sbjct: 752 EVLDRLD------MTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPR 809

Query: 664 RLNVALTRARYGIVILGNPKVLSKQPLWNSLL 673
           R NVA+TRA   +VI+GNP ++ K   WN LL
Sbjct: 812 RFNVAITRAISLLVIIGNPHIICKDMNWNKLL 809

[Close]
BLAST of Carg23233 vs. TAIR 10
Match: AT2G19120.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-44
Identity = 120/336 (35.71%), Postives = 180/336 (53.57%), Query Frame = 0 

Query: 354  LHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLSNFR--FR 413
            L ++ +L   +G+  + +    +  + + E   +  A+++  T   +G    S     F 
Sbjct: 717  LVEISRLLIVEGKFRAGNNFNLEEARASLEASFANEAEIVFTTVSSSGRKLFSRLTHGFD 776

Query: 414  QVLIDESTQATEPECLIPLVLGAKQACRAVLVGDHCQLGPVIMCKKAARAGLAQSLFERL 473
             V+IDE+ QA+E   L PL LG   A R VLVGD  QL   ++ K A     ++SLFER 
Sbjct: 777  MVVIDEAAQASEVGVLPPLALG---AARCVLVGDPQQLPATVISKAAGTLLYSRSLFERF 836

Query: 474  VLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTINERQSTGIDFPWPVPNRPMFF 533
             L G   + L VQYRMHP + +FPS  FY+G L++  +I+      I +  PV    +FF
Sbjct: 837  QLAGCPTLLLTVQYRMHPQIRDFPSRYFYQGRLKDSESISSAPDE-IYYKDPVLRPYLFF 896

Query: 534  YVQMGQEEISASGTSYLNRTEA---ANVEKIVTTFLRS-GVVPSQIGVITPYEGQRAYIV 593
             +  G+E       SY N  EA     V   +   L+S G     +GVITPY+ Q   + 
Sbjct: 897  NISHGRESHRGGSVSYENVDEARFCVGVYMHLQKTLKSLGAGKVSVGVITPYKLQLKCLK 956

Query: 594  NYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALT 653
            +      AL Q   KEI + +VD+FQG+E+D II+SCVR++ H G+GF++D RR+NVALT
Sbjct: 957  HEF--GNALGQDELKEIYINTVDAFQGQERDVIIMSCVRASGH-GVGFVSDIRRMNVALT 1016

Query: 654  RARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVE 684
            RAR  + ++GN   L K   W +L++  +   C +E
Sbjct: 1017 RARRALWVMGNASALMKSEDWAALISDARGRNCFME 1045

The following BLAST results are available for this feature:
BLAST of Carg23233 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015680.10.0e+00100.00Regulator of nonsense transcripts 1-like protein [Cucurbita argyrosperma subsp. ... [more]
KAG6577641.10.0e+0099.71Regulator of nonsense transcripts 1-like protein, partial [Cucurbita argyrosperm... [more]
XP_023553136.10.0e+0099.61regulator of nonsense transcripts 1 homolog [Cucurbita pepo subsp. pepo][more]
XP_022923405.10.0e+0099.42regulator of nonsense transcripts 1 homolog [Cucurbita moschata] >XP_022923406.1... [more]
XP_023007671.10.0e+0099.33regulator of nonsense transcripts 1 homolog [Cucurbita maxima][more]
BLAST of Carg23233 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJR00.0e+0083.29Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana OX=3702 GN=U... [more]
Q929000.0e+0061.72Regulator of nonsense transcripts 1 OS=Homo sapiens OX=9606 GN=UPF1 PE=1 SV=2[more]
Q9EPU00.0e+0061.58Regulator of nonsense transcripts 1 OS=Mus musculus OX=10090 GN=Upf1 PE=1 SV=2[more]
Q98TR37.2e-29664.76Putative regulator of nonsense transcripts 1 OS=Takifugu rubripes OX=31033 GN=re... [more]
Q9VYS32.2e-27358.29Regulator of nonsense transcripts 1 homolog OS=Drosophila melanogaster OX=7227 G... [more]
BLAST of Carg23233 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1E6Q50.0e+0099.42regulator of nonsense transcripts 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1L1870.0e+0099.33regulator of nonsense transcripts 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A0A0L1C70.0e+0098.65Helicase ATP-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa... [more]
A0A1S3BKE90.0e+0098.46LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 homolog OS=Cucumis melo... [more]
A0A6J1DQJ20.0e+0098.17regulator of nonsense transcripts 1 homolog isoform X2 OS=Momordica charantia OX... [more]
BLAST of Carg23233 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47010.10.0e+0083.29RNA helicase, putative [more]
AT2G03270.15.0e-5033.48DNA-binding protein, putative [more]
AT5G35970.11.1e-4933.48P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT1G05460.13.7e-4533.63P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
AT2G19120.11.8e-4435.71P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018999RNA helicase UPF1, Cys/His rich zinc-binding domainPFAMPF09416UPF1_Zn_bindcoord: 1..51
e-value: 1.8E-16
score: 60.4
IPR040812RNA helicase UPF1, 1B domainPFAMPF18141DUF5599coord: 103..192
e-value: 2.7E-30
score: 104.3
IPR040812RNA helicase UPF1, 1B domainCDDcd214071B_UPF1-likecoord: 104..191
e-value: 1.39135E-43
score: 150.756
IPR041677DNA2/NAM7 helicase, helicase domainPFAMPF13086AAA_11coord: 350..454
e-value: 1.4E-26
score: 93.8
NoneNo IPR availableGENE3D2.40.30.230coord: 104..192
e-value: 3.8E-35
score: 121.6
NoneNo IPR availableGENE3D6.10.140.1240coord: 334..386
e-value: 1.2E-24
score: 87.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 720..761
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 824..852
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1003..1038
NoneNo IPR availablePANTHERPTHR10887:SF486REGULATOR OF NONSENSE TRANSCRIPTS 1-LIKE PROTEINcoord: 1..814
NoneNo IPR availableCDDcd18039DEXXQc_UPF1coord: 248..486
e-value: 4.8998E-166
score: 484.828
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 252..316
e-value: 2.1E-5
score: 24.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 212..485
e-value: 4.3E-75
score: 253.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 486..697
e-value: 2.9E-76
score: 257.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 245..681
IPR041679DNA2/NAM7 helicase-like, C-terminalPFAMPF13087AAA_12coord: 464..659
e-value: 3.0E-59
score: 200.0
IPR041679DNA2/NAM7 helicase-like, C-terminalCDDcd18808SF1_C_Upf1coord: 487..676
e-value: 1.08628E-78
score: 252.925
IPR045055DNA2/NAM7-like helicasePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 1..814
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 257..389
score: 10.553095

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23233-RACarg23233-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042742 defense response to bacterium
biological_process GO:0048571 long-day photoperiodism
biological_process GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
biological_process GO:0009611 response to wounding
biological_process GO:0008380 RNA splicing
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0006412 translation
biological_process GO:0009867 jasmonic acid mediated signaling pathway
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005829 cytosol
cellular_component GO:0000932 P-body
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004386 helicase activity