Carg23172 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23172
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	30S ribosomal protein S9
Location	Carg_Chr15: 7787091 .. 7794992 (-)
RNA-Seq Expression	Carg23172
Synteny	Carg23172

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTACTAACCTTGATTTCCACTAAGCCCCCAGCTCAATCTCCTAGATTTCATCTTCTTCCCCGATTCTTCTCCTCCAGTAACAATGGAAGTAATAACAATAAGAACGGTGGAAGCAGAGACCAACCGACGAGTAATGTCTGGAAACTTTCACGAGAAAGCGACGAAAATTTCGACCAATTGTTCACTCAGGAAGCTGACAACCTTGATGGTATTGCGGAGGATGACTCTGCTCCGGCCAATGACGATTCATGGGTGAGGTCGGAAGACGGGGATCAGGGTGCTGCGGGAGACATTTTTGCGAGAGTGGAGAAGGAAATTCGAGGAAATAAAGATGACGATGGTGCTAATGAATGGGTTGCGGCGACAAAGTTCGAGCCGTGGGGCCTGGTAGAGGAAGAAAAGAGTGATGTCTTCAACATTCAGGAGGATGCAGTTGAAATTGGGAAACCCAGAGATGAGATTAAGGAAGTGGATAGTGAGAGCAGTGAGGATGCTAGGAAGCTCGAAAAGGAGGAGCAGGAACTCACTGCCATCCTTAAAGGCAAGTTTTTCTCCCCCTTGATTGGGAAGATTGTATTTCAAGTTCAACAACTTAATGGATTTTCTTGGGTTTCTAATTCTGTGGCATGTATGTATTGCTTGAGGATTCAATTTCGTAATATGTTGGTGTATTCCAGATCATTTGATTCTATGGTTGTCCTGATCGAGGCAATTCATAACAGTGTTCTTACTCGTAGCTTTTGCGTTTATATTGAGAACGGCATAAGTATATGGTTGAGGCCATTGAACTTTTGCATTTTTCCTGTGTAGTGGTTTAAACGATGTCATTTGTAGGTAAGTTAAAAAAGTTGAATTTTATTGGTTACTGTCGTTACTCTTCTGTGATGTATTTTAGCTGCTATGCGCCCGCCCCTCTTTATTTTTGCAAGCACAAGGTTATCAGATTTCTAGATTTGTAGATGTATTGGAAACCTAAAGAAGAAGAATGAAGCCCATTTAACCAAATGACTTTGGAGGGTTACTGTAAAATCATGTGGACGATTGGCTTTTAGATAATCACAGCTTGGAGTTTTAAAGTCATCGCTAAGATTTTATGGAACTATGCTGTTAGCGCTTTTGTTAGGGTCTTTGACAGGGGAGATCTGTTCCAACTTTTGAAGATAAGGAGGTTCCTTCTGATTCTGTCTATAATAGTACAACTCACCTCTGCTTGATGGTATTATAGTCACAGGAACTCTTTTGTAACTACTCATTTGTGATCCTTTGGGATTGGGAAGCCATTATTTCATAGTTTTTGGGAGGAGGGGTTTTCTCAACCCCTTGTCTTCGGTTGTGTTCAATGCTTCCCTCCTTTATATATCTCTGTTATTTATACAAAAGAAAGGGGGGAAAACAGTGGGATAATGTGGCATAAGGTGGTGGCAAATGTGCTTCTAGAAAGAGGATTTTAGATGGTATGTAGAAGTCCTTGATGTATCATTTTGAAGCTAAAAGATACAGTTGTTAAGTTTTCTTCATGAAAACAGGTAATGGTGCGTGTTTGAGACAAACAGCCGAAGTGAGAAAGGTTAAGGGAGGGTGACTTCTCACCTCTTTGTTTCACAAACTCTTTCTTTCATTGACTTGCAAGCTTGTGTAGTAATAAGAACACCATTACCTCCCTTGAGGTTGAAAATGGTCAGGTGTCAGCTGCAAAAAAACTAATCCAAGCACAAAAATCTTCAAATGAGGAATAACACAAGCTCACATGGATCACCTTCAGCAATGAAAACCATGAGCTTGGAAAATTCTCGGGCTAAATAGATGGGGTCACTCTAAAGTTCCTCCAGGTGAGGTAAAGAGCATTAAGCCAAATACAATAAGAGGTATTAGACCCTCCTCAATCAACCTTGTTCAGTTTCTAAATACTCTGGTGGTGGGTAATGATCTGGATAGATTGGTGTGAAAGACAGATCATTTGGGCAGTTTTTCAACGAAGTCCACATTCTTGACGATGACTAATGGGATGAGGAAATTGTATTATCATAATATGGAAACTCAAAATCCCTAAGAAGGTGAAAGTTCTTTTTATGGTCCCTAGCCTACAAAACTTTATATACCCACAATAAGCTTAAAAAAAAAAAAAAAAAAAAAAAACTTCTAAATAGGATGATGTCTCCCTCAGTTTGTTGTCTCTACATATAGGAGGAGTCCTTAGATCACATTTTTCTTCTCTGTTGGTTTGTCTCCAAGAAGATAGATGTTTGACTTTTAGAAGGGCTTGATGGGAAGAGTTTTTGCGGAAGGAGGGAAGATCCTTTGGAGATGTGCAACTCGCTCCCTTCTTTGGTGTCTTTGGAAGGAAAGAAATAGCAGGGTTTTTGAAGATAAGTGCTCTTCCTTTGATTCCTTTTGGCTTTTGGTCAGCACATTGCTTCTTGGTGGTGCACAAAGCACGTCAAATTCTTTTGTAATTATAGCCTTTTGATGATTATTAACAACTGAGAGACTCTCCTTAATTAGTTTTGGGAGGGATAATATCAATCCCTTGCCCTTAGATTGTTCTTTGGTTCTTTTGTTAAATATATTTTTATGTTTCTTATCCAAAAAAAAAAAAAAAAAAAAAAAAAGAACCTACCCTTTTTGTTTAATTAGTTAGATGAATTTGTTGAAGTTTGGAATTTTGGGTCATGAATGCGTTTCTGTAATAGTTTCACATATTTGTATCAAATATCTTATTCATTTAATATGTCAACTGCAGGTCCTAATCGAGCATTTGGAGACCTTATTGCTGCATCAGGAATCACGGATGACATGCTAGACAGTTTGATTGCGTTGAAAGATTTGGAAGGGGTTGAGGGGTTGCCCCCTCTAAGTGTATTAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAGCGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGATAGATGACAAAGGAAGAGCATACGGCACAGGAAGAAGGAAATGTAGCATTGCTCGTGTATGGGTTCAGCCAGGAGATGGCAAGTTTGTAGTGAATGATAAGGAATTTGATGTTTATTTTCCAATGCTCGATAGTCGGGCTGCTCTTCTTCGACCTTTCTCCGAGACCAAAACATTAGGCCTTTGGGATGTCAAATGTACGGTTAAAGGAGGTGGCACAACAGGTAAGCTTAAGCTTAAGTCACATTTAACACTTCTTGTTACATCTTTATATCTAGTTATGTCTGTTCTTAAAAATTGTGTTTTGCATTTAGGTTTATGATGTCAACTAGGTTCCAAACAATAGTAAAATGAGATGCTAGCATTTGTAAAGAATAAATCACTTTTATAATTTTTCTTCTGCAAACTTGGCATTGATAAATTTTATATTTTCCTCACATTTTCTATGAAACTTGGATCAGATCATCTGTCCGTTCTTCATTTCATTTCATCTAGATGAATACAAACAACAGTGAATCCCTTCATTCAAAAGCTTTTTAGCATCCTTAAAGATGATATTCGTATGGTGTTCCTTTACTTTGGTGTGAGTAGTTGTACCAGTATATATGTATATTTACACACGTACTCACACACACCAGAATGCATACAAGTGTTTGTGTTCATTCTTGTTGGATACAAATTTTCATTGAAGCAAATGACATATACAGCAATTTTAAAGGATAACAGAAAAGAAACAATTGATGGCTACAGTAGGAGGGAGAATAATTATAAAACATTTTAGTAATAGACCATCGAGGAGATGTGAAAAATAAAATGGAGTAGTCCCTTCAAAGTTTTGTAGTAGACTTGTTTCTTTGCTATTTTGTGGGACATTTAAATTAAGAGAAATAATAGAATTTTTAGAGAGATTGAGAGGTTGGGTGAGGAGGTTTGGGAGGTGGCTAGGTTTAGTGCCTCCTTGTGGGCGACAACCACTGGGTCTTTCTATAATTATCAACTTTTCTTCTTGTGAACCGGTGGCATTTTTAGTAGTTAGGGTTGGATTCCTATTGTAGAAGGGAAGATAGTTATAATCCATATTTGTGATAGATCATCCAAGATATATGAAAAGAAAATGGAGTCCTACCTTTTGGGAGAAGCACTATAGTTTCTTTTCTATTTTTTGGGACATTTGCATTGAAAGAAATTATAGAACTTTAGATAGATTGAGAGCTCGAGTGAGGAGATTTATGATGTGGCTAGGTTTATTGTCTGGTGTCACTAGGTCTTTTCGTAATTGTGAGCTTAGTCTTGTTCTTTTGAACTGAAGTCCTTTTCTGTAGTTAGGGTTGGGTTGAATTTCTTTTGTTGGAGCTTGTTCTTTTGACCCAAATACTCATCTCGCTTTTTCTGCACTAATAGTATTTATACAAAATTTCCATCCCACCTACTCCCTTATGCCCAAAAAGGAAGAGAAAATCTTATTTATTTATTATTATTATTATTAAAAACTCAAGATGAACAAATACATTGGCTATACAGTAGTAAATATCAAGTCCCTGTGAAGTATACATGAACTGGAAGAAAATAGTTTGAGCAGTCTGAGTTCTCGTATTTAGTCACATATCTTGCAAAGTTGGTAGGGGAGACTGCTCTTTTTTGGAAAGATCAATGTATAGGTAGAACAGTCCTCAAAGATGAATTCCCCTTTCTATATTCTCTCACACTCAATAAGGAAGCTTCCGTTTCTGACCTGTGGATTTACTGATCTTGTTCTTGGAACCTCTTTCTGAGAAGAGGCCTTAACTAAGAGGAAATTGATGAATGGGGTTGCCTTTTCAACTTGCTTTCATCAACCAAGAGGATTCATGGGTATGGAATATCGATAAAGATAGTGTCCACCTCAAATCTCTGCCAAGGTCTCTTGCAAAAGCTGGAGTTCACAGCAAAAAAACAGATTTATCATTCTATTTGGAAGGAGAACATCCAAAATTTAACCTTTTTATGTGGGAGCTTTGTCACTCATGTTTATGACAAGCTTCAACGAAGATTCCCGACTTTATATCTCCCATAGTTTCTGCATTATTTGCAAAAGGGGTTGAGAGACATATTCATCTTTTCAGCACTTGCTCCTTTGCAAAAACCCTTTTGGAATTTTATCATCGCCGCTTTTGGTTGGTCTACACTGCTGCCAGGGGACATTTTTTATTTCCTTTCCCTCACGTTCACTGGCCATCCTTTCAAGGAGAAAAAGATCCTATGCCCCAAATTTACCCCGACTTTTTTTGGGGTCTATTTGGTTCCCTCTCGAATTTTCTCTGACAAAGAACAGAGCTCTGTTACTTCTATAGATCCTACTATTTATTAAGCTCTATCTTAGTGTGAATTGTCTCAATCTTTCTGTAACTATAGCCTTTTTTCTCCATATTTTGAAATTTCATTTTATGAATGAAGGAATTGTTTCCTTTTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAGAAGAAGAAAAACCTGAAAAATCTAAAGAAAACTGAGCAAGAGGAAACTCAGCAATCTGTAGGAAGGACAGTAGCATATAGACTTTATTATACTCATCCTGGAAAACTACTTTGATAAAAGACTCCAGGCGTTTCAGCTTTCTGAACAGCGTGTATCAACTCCTGAGAGGTTAAAGCCACGTCAGGAGCAAGAGGAAACTCAGCAATCTGTAGATGCAGGCGTTTCAGCTTTCTCCCAGTTGTGTGCTATGCAAAGACCGGATGGGGAAAATTTCTTATTTTTTCTTTCTCATTCCTAGTTGGGCTTTTCTAAGATTTCTTTGGGTTGTGTGAAGATTTCTTTGTGGCTATCAAGAACATTTAGCCCAAGCAAACGCTAGCTACAAAGCTTAAGCTGACCAATGTAGTTGACTTATTTGGGGCCATTATTTTCGGTATAACGCCAAACTGTTTTGATTTGTGCTGTTAATGTGGTGGATATGCTCCTTTGGGCTATACACAGTGAGAAATCATTAGAATCATGAAGAATAAAGCTTGAGAGTTAGATGAGCTCGGGGGGGGGGAGGGGGTTATGGTTTTTGTGTTCTGCTTGCTGTACTCCCATTTTCTTGAAATATTTCGTATTTTTTTTTATTAATGTCAATTAAAAGAACTATGTTTAAATTCTCCTTTGGCATGCAGTGTGTTAATATCTTATACCTCGTCTAATTCTTGTAGTTTTCTCTCTTTAATGAAAAGCTCTCTTATAGAAAAAAAAAAAAAAATTCCTTCTGCTACTACTTGGCAACTTATCAGTTTCATTGTATAGTGTTTCAACGCATGATATTAAACCCTGCTATTCAGGCATGGAATATGCGTTTGAAACAAATGTCCAAGTTAGTATATATTATGATTGATACAAAATAAATGTTTATTAGACTTCAGTCTGTGCTTTCCTTTGTCGCCGTGGAATGATGTACAATGCATAAACTTCTTTAATTCATGTTCTACAACCATGAAAGTTCAAATAAATGTGAACTTCATGATTGAACTGGTAACTTCGAACTTGGGACTGCCCTGGTCTTAGGATACCCCTCCCATCTTTCCCAGACCTGAGTACCCCTGTTCACAAAAGCAAAATCTCCTTTTTACTCGCATTCTCTATGTTCCCTGCTGTGCCACAACTCTCTATCAACACATATGACAGTTACAAAAGTAGGCCACTTCTTTCAACCTGTTTTCGTTGATACACATTTATTATTGGTGGCTGATCATCTAATCGATTTACCCTCTGATTTACCCTACTTTACATGATATGAAAAATCAGAGCTGGGTTTGTTTTTTGTGTCGTCATTAGCATATAAGATCTTTTACTGCCAGCTCCTCAGTCTAATGATCGGATGGAAACATTTATGTTGACTGTATTATGAAGGATGCATTAAAGTTTCGACTTTGCTGCTTCTGGAGTTTTATCCAGCCTCCAAAGTCATTGACTGTTAAACCTTTTTTTTGCTTCAATCTGTTCCAAATTCAAATTTCCTTCTCTCTATCCTCTTTGAATGTGTTTTCGAGTGAGTGAAAGTTCTGAACTTTCTTTTACAGGCCAAGTTGGAGCTATTCAATTGGGTATCAGCAGAGCCTTGCAGAATTGGGAGCCAGATTTCCGTCCTCCATTGCGAGCATGTAAGATAAAACGAATCACAGTTTTTTCAGTCCGCTATGATGAGAATGATATATATCAATCAGTTGCATTCATTTACATTTTTACTGATCAAAATTCCCTGTTCTATTTGCTCCGCAGCTGGTTTCTTGACGCGAGATTCACGTGTCGTAGAAAGAAAGAAGCCAGGAAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAGCGTTAGGTTACACATGTACTCGTATGGAACTTCGACATTTTTCTACTGCAATAAATAGACACAAGGTTTATAAACAGGTTGGTTCCTGCATCGTTTTTGTAGTGTAGCCATGATTTGTTTATTCCAAATACCCTGTTTGTTTGTTGCAAATATAACTATTGAATTTAACACTGAGCCATGGAAGTTTACTACTCCCTCTTCCCTCTCATGGATATTTATTCACTTTCTTGATGGTTACTCTTTTCTATTCTTTTTCTCTCATTGGAATGTAGTGGACACTTACATTTATACTCTCATCCTCTAGAGGACATTGTATTATATTATTGTTTATGAACTGTTTATTTGTTTCTTGGAATTTAATGGACATTGTTTTCTTGTTTGTTCATGGATGTATGAGGCTGGAGGTTAATAGGTCTGGGAATAAAAGATTGTTGAGAATCAAAGATGACCTATTTGGTTGTGCATGAGAATATTGTCTGAAAATGATATTTTCGTCTCGTTCACTCACGGTTTTCCTTTTTGTTCTCACTCACGCGTTTTTCCTCTCAAGAACTATATGCC

mRNA sequence

ATGCTTCCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTACTAACCTTGATTTCCACTAAGCCCCCAGCTCAATCTCCTAGATTTCATCTTCTTCCCCGATTCTTCTCCTCCAGTAACAATGGAAGTAATAACAATAAGAACGGTGGAAGCAGAGACCAACCGACGAGTAATGTCTGGAAACTTTCACGAGAAAGCGACGAAAATTTCGACCAATTGTTCACTCAGGAAGCTGACAACCTTGATGGTATTGCGGAGGATGACTCTGCTCCGGCCAATGACGATTCATGGGTGAGGTCGGAAGACGGGGATCAGGGTGCTGCGGGAGACATTTTTGCGAGAGTGGAGAAGGAAATTCGAGGAAATAAAGATGACGATGGTGCTAATGAATGGGTTGCGGCGACAAAGTTCGAGCCGTGGGGCCTGGTAGAGGAAGAAAAGAGTCCTAATCGAGCATTTGGAGACCTTATTGCTGCATCAGGAATCACGGATGACATGCTAGACAGTTTGATTGCGTTGAAAGATTTGGAAGGGGTTGAGGGGTTGCCCCCTCTAAGTGTATTAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAGCGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGATAGATGACAAAGGAAGAGCATACGGCACAGGAAGAAGGAAATGTAGCATTGCTCGTGTATGGGTTCAGCCAGGAGATGGCAAGTTTGTAGTGAATGATAAGGAATTTGATGTTTATTTTCCAATGCTCGATAGTCGGGCTGCTCTTCTTCGACCTTTCTCCGAGACCAAAACATTAGGCCTTTGGGATGTCAAATGTACGGTTAAAGGAGGTGGCACAACAGGCCAAGTTGGAGCTATTCAATTGGGTATCAGCAGAGCCTTGCAGAATTGGGAGCCAGATTTCCGTCCTCCATTGCGAGCATCTGGTTTCTTGACGCGAGATTCACGTGTCGTAGAAAGAAAGAAGCCAGGAAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAGCGTTAGGTTACACATGTACTCGTATGGAACTTCGACATTTTTCTACTGCAATAAATAGACACAAGGTTTATAAACAGGTTGGTTCCTGCATCGTTTTTGTAGTGTAGCCATGATTTGTTTATTCCAAATACCCTGTTTGTTTGTTGCAAATATAACTATTGAATTTAACACTGAGCCATGGAAGTTTACTACTCCCTCTTCCCTCTCATGGATATTTATTCACTTTCTTGATGGTTACTCTTTTCTATTCTTTTTCTCTCATTGGAATGTAGTGGACACTTACATTTATACTCTCATCCTCTAGAGGACATTGTATTATATTATTGTTTATGAACTGTTTATTTGTTTCTTGGAATTTAATGGACATTGTTTTCTTGTTTGTTCATGGATGTATGAGGCTGGAGGTTAATAGGTCTGGGAATAAAAGATTGTTGAGAATCAAAGATGACCTATTTGGTTGTGCATGAGAATATTGTCTGAAAATGATATTTTCGTCTCGTTCACTCACGGTTTTCCTTTTTGTTCTCACTCACGCGTTTTTCCTCTCAAGAACTATATGCC

Coding sequence (CDS)

ATGCTTCCTCGTTTACTTCCTAAACCCTCCCATTTCAGATTACTAACCTTGATTTCCACTAAGCCCCCAGCTCAATCTCCTAGATTTCATCTTCTTCCCCGATTCTTCTCCTCCAGTAACAATGGAAGTAATAACAATAAGAACGGTGGAAGCAGAGACCAACCGACGAGTAATGTCTGGAAACTTTCACGAGAAAGCGACGAAAATTTCGACCAATTGTTCACTCAGGAAGCTGACAACCTTGATGGTATTGCGGAGGATGACTCTGCTCCGGCCAATGACGATTCATGGGTGAGGTCGGAAGACGGGGATCAGGGTGCTGCGGGAGACATTTTTGCGAGAGTGGAGAAGGAAATTCGAGGAAATAAAGATGACGATGGTGCTAATGAATGGGTTGCGGCGACAAAGTTCGAGCCGTGGGGCCTGGTAGAGGAAGAAAAGAGTCCTAATCGAGCATTTGGAGACCTTATTGCTGCATCAGGAATCACGGATGACATGCTAGACAGTTTGATTGCGTTGAAAGATTTGGAAGGGGTTGAGGGGTTGCCCCCTCTAAGTGTATTAGAGGATATGCGTTATGAGAAAAACACAAGAAAATCCTCAAGAGCTGAAATTGAGCGCCAGAAACAAGAAGAGGTTGCAAAAGCAAGAGTGAGACAGATAGATGACAAAGGAAGAGCATACGGCACAGGAAGAAGGAAATGTAGCATTGCTCGTGTATGGGTTCAGCCAGGAGATGGCAAGTTTGTAGTGAATGATAAGGAATTTGATGTTTATTTTCCAATGCTCGATAGTCGGGCTGCTCTTCTTCGACCTTTCTCCGAGACCAAAACATTAGGCCTTTGGGATGTCAAATGTACGGTTAAAGGAGGTGGCACAACAGGCCAAGTTGGAGCTATTCAATTGGGTATCAGCAGAGCCTTGCAGAATTGGGAGCCAGATTTCCGTCCTCCATTGCGAGCATCTGGTTTCTTGACGCGAGATTCACGTGTCGTAGAAAGAAAGAAGCCAGGAAAGGCGAAAGCAAGAAAGAGCTTCCAATGGGTGAAGCGTTAG

Protein sequence

MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVWKLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIRGNKDDDGANEWVAATKFEPWGLVEEEKSPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR

Homology

[Close]

BLAST of Carg23172 vs. NCBI nr
Match: KAG7016858.1 (rpsI, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 694.9 bits (1792), Expect = 3.6e-196
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW
Sbjct: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKSPNRAFGDLIAASGITDDMLDSLIALKDLEGVE 180
           GNKDDDGANEWVAATKFEPWGLVEEEKSPNRAFGDLIAASGITDDMLDSLIALKDLEGVE
Sbjct: 121 GNKDDDGANEWVAATKFEPWGLVEEEKSPNRAFGDLIAASGITDDMLDSLIALKDLEGVE 180

Query: 181 GLPPLSVLEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARV 240
           GLPPLSVLEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARV
Sbjct: 181 GLPPLSVLEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARV 240

Query: 241 WVQPGDGKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAI 300
           WVQPGDGKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAI
Sbjct: 241 WVQPGDGKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAI 300

Query: 301 QLGISRALQNWEPDFRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR 352
           QLGISRALQNWEPDFRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR
Sbjct: 301 QLGISRALQNWEPDFRPPLRASGFLTRDSRVVERKKPGKAKARKSFQWVKR 351

[Close]

BLAST of Carg23172 vs. NCBI nr
Match: KAG6579377.1 (30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 669.8 bits (1727), Expect = 1.2e-188
Identity = 350/397 (88.16%), Postives = 350/397 (88.16%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           GNKDDDGANEWVAATKFEPWGLVEEEKS                                
Sbjct: 121 GNKDDDGANEWVAATKFEPWGLVEEEKSDVFNIQEDAVEIGKPRDEIKEVDSESSEDARK 180

Query: 181 --------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240
                         PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 352
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

[Close]

BLAST of Carg23172 vs. NCBI nr
Match: XP_023550446.1 (28S ribosomal protein S9, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 666.4 bits (1718), Expect = 1.4e-187
Identity = 348/397 (87.66%), Postives = 349/397 (87.91%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSHFRLLTLISTKPPAQ+PRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           GNKDDDGANEWVAATKFEPW LVEEEKS                                
Sbjct: 121 GNKDDDGANEWVAATKFEPWSLVEEEKSDLFNIQEDAVEIGKPRDEIKEVDSESNEDARK 180

Query: 181 --------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240
                         PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 352
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

[Close]

BLAST of Carg23172 vs. NCBI nr
Match: XP_022922373.1 (28S ribosomal protein S9, mitochondrial [Cucurbita moschata])

HSP 1 Score: 664.5 bits (1713), Expect = 5.2e-187
Identity = 348/397 (87.66%), Postives = 348/397 (87.66%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           KLSRESDENFDQLFTQEADNLDGIAEDDSAPAN DSWVRSEDGDQGAAGDIFARVEKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANADSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           GNKDDDGANEWVAATKFEPW LVEEEKS                                
Sbjct: 121 GNKDDDGANEWVAATKFEPWSLVEEEKSDVFNIQEDAVEIGKPRDEIKEVDSESSEDARK 180

Query: 181 --------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240
                         PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 352
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

[Close]

BLAST of Carg23172 vs. NCBI nr
Match: XP_022972996.1 (28S ribosomal protein S9, mitochondrial [Cucurbita maxima])

HSP 1 Score: 655.6 bits (1690), Expect = 2.4e-184
Identity = 342/397 (86.15%), Postives = 346/397 (87.15%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSHFRLLTLISTKPPAQ+PRFH+LPRFFSSSNNGSNNNKNGGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHVLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDD+WVRSEDGDQGAAGDIFARVEKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDTWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           G+KD DGANEWV ATK EPW LVEEEKS                                
Sbjct: 121 GDKDGDGANEWVTATKLEPWSLVEEEKSDVFNIQEDAVEIGKSRDEIKEVDSESSEDARK 180

Query: 181 --------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240
                         PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 352
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

[Close]

BLAST of Carg23172 vs. ExPASy Swiss-Prot
Match: Q8L6Z4 (30S ribosomal protein S9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS9M PE=1 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 9.8e-96
Identity = 172/210 (81.90%), Postives = 193/210 (91.90%), Query Frame = 0


Query: 142 LVEEEKSPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYEKNTRKSS 201
           L+E  K P+RAFGDLIA SGITD+MLDSLIALKD +GVEGLPPL+ +E++R EK+++KSS
Sbjct: 221 LLEVIKGPDRAFGDLIAKSGITDEMLDSLIALKDFQGVEGLPPLTEIENLRREKSSKKSS 280

Query: 202 RAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFP 261
           RAEIE Q QE++AKARVRQ+D+ GRAYGTGRRKCSIARVW+QPG+GKF VN+KEFDVYFP
Sbjct: 281 RAEIELQMQEDIAKARVRQVDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFP 340

Query: 262 MLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRA 321
           MLD RAALLRP +ETKTLG WD+KCTVKGGGTTGQVGAIQLGISRALQNWEPD R  LRA
Sbjct: 341 MLDHRAALLRPLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRA 400

Query: 322 SGFLTRDSRVVERKKPGKAKARKSFQWVKR 352
           +GFLTRDSRVVERKKPGKAKARKSFQWVKR
Sbjct: 401 AGFLTRDSRVVERKKPGKAKARKSFQWVKR 430

[Close]

BLAST of Carg23172 vs. ExPASy Swiss-Prot
Match: A8I7Z9 (30S ribosomal protein S9 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) OX=438753 GN=rpsI PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.0e-37
Identity = 77/138 (55.80%), Postives = 100/138 (72.46%), Query Frame = 0


Query: 214 AKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRAALLRPF 273
           A   V+++D  GRAY TG+RK ++ARVWV+PG GK +VND+  +VYF     R  + +PF
Sbjct: 17  APVHVQKLDKFGRAYATGKRKDAVARVWVRPGTGKIIVNDRPVEVYFARPVLRLIINQPF 76

Query: 274 SETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTRDSRVVE 333
           +     G +DV CTV GGG +GQ GA++ GISRAL  +EP+ R PL+  GFLTRDSRVVE
Sbjct: 77  AAAAREGAYDVVCTVSGGGLSGQAGALRHGISRALTFYEPELRGPLKKGGFLTRDSRVVE 136

Query: 334 RKKPGKAKARKSFQWVKR 352
           RKK G+AKAR+SFQ+ KR
Sbjct: 137 RKKYGRAKARRSFQFSKR 154

[Close]

BLAST of Carg23172 vs. ExPASy Swiss-Prot
Match: A7INH2 (30S ribosomal protein S9 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) OX=78245 GN=rpsI PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.8e-36
Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 0


Query: 214 AKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRAALLRPF 273
           A   V+++D  GRAY TG+RK ++ARVWV+PG GK  +ND++ +VYF     R  + +PF
Sbjct: 23  APVHVQKLDKYGRAYATGKRKNAVARVWVRPGTGKVTINDRDIEVYFARPVLRLMINQPF 82

Query: 274 SETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTRDSRVVE 333
                 G +DV CTV GGG +GQ GA++ GIS+AL  +EP+ R PL+  GF+TRDSRVVE
Sbjct: 83  QAAAREGQYDVVCTVSGGGLSGQAGAVRHGISKALTYYEPELRSPLKKGGFITRDSRVVE 142

Query: 334 RKKPGKAKARKSFQWVKR 352
           RKK G+AKAR+SFQ+ KR
Sbjct: 143 RKKYGRAKARRSFQFSKR 160

[Close]

BLAST of Carg23172 vs. ExPASy Swiss-Prot
Match: A9IVX6 (30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) OX=382640 GN=rpsI PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.3e-36
Identity = 77/144 (53.47%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 208 QKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRA 267
           +  E V    V+++D +GRAY TG+RK ++ARVW++PG GK ++N+KEFD YF     R 
Sbjct: 18  EPHENVVPVHVQKLDSQGRAYATGKRKDAVARVWIKPGSGKIIINNKEFDKYFARPVLRM 77

Query: 268 ALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTR 327
            L +P   T     +D+  TV GGG +GQ GAI+ GIS+AL  +EP+ RP L+  GFLTR
Sbjct: 78  ILRQPIVATNRDTQFDIVATVAGGGLSGQAGAIRHGISKALTYYEPELRPILKKGGFLTR 137

Query: 328 DSRVVERKKPGKAKARKSFQWVKR 352
           DSRVVERKK GKAKAR+SFQ+ KR
Sbjct: 138 DSRVVERKKYGKAKARRSFQFSKR 161

[Close]

BLAST of Carg23172 vs. ExPASy Swiss-Prot
Match: B2S535 (30S ribosomal protein S9 OS=Brucella abortus (strain S19) OX=430066 GN=rpsI PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.7e-36
Identity = 77/143 (53.85%), Postives = 100/143 (69.93%), Query Frame = 0


Query: 209 KQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRAA 268
           K E  A   V+++D +GRAY TG+RK ++ARVWV+PG GK  VNDKEF+ YF     +  
Sbjct: 16  KTEAAAPVHVQKLDAQGRAYATGKRKDAVARVWVKPGTGKITVNDKEFEKYFARPVLQMI 75

Query: 269 LLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTRD 328
           L +P   +   G +D+  TV GGG +GQ GA++ GIS+AL ++EP  R  L+  GFLTRD
Sbjct: 76  LQQPIVASNRAGQFDIVATVAGGGLSGQAGAVRHGISKALTDYEPGLRTVLKKGGFLTRD 135

Query: 329 SRVVERKKPGKAKARKSFQWVKR 352
           SRVVERKK GKAKAR+SFQ+ KR
Sbjct: 136 SRVVERKKYGKAKARRSFQFSKR 158

[Close]

BLAST of Carg23172 vs. ExPASy TrEMBL
Match: A0A6J1E6E6 (28S ribosomal protein S9, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430383 PE=3 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 2.5e-187
Identity = 348/397 (87.66%), Postives = 348/397 (87.66%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           KLSRESDENFDQLFTQEADNLDGIAEDDSAPAN DSWVRSEDGDQGAAGDIFARVEKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANADSWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           GNKDDDGANEWVAATKFEPW LVEEEKS                                
Sbjct: 121 GNKDDDGANEWVAATKFEPWSLVEEEKSDVFNIQEDAVEIGKPRDEIKEVDSESSEDARK 180

Query: 181 --------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240
                         PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 352
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

[Close]

BLAST of Carg23172 vs. ExPASy TrEMBL
Match: A0A6J1I7H1 (28S ribosomal protein S9, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471519 PE=3 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.2e-184
Identity = 342/397 (86.15%), Postives = 346/397 (87.15%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSHFRLLTLISTKPPAQ+PRFH+LPRFFSSSNNGSNNNKNGGSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFRLLTLISTKPPAQAPRFHVLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDD+WVRSEDGDQGAAGDIFARVEKEIR
Sbjct: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDTWVRSEDGDQGAAGDIFARVEKEIR 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           G+KD DGANEWV ATK EPW LVEEEKS                                
Sbjct: 121 GDKDGDGANEWVTATKLEPWSLVEEEKSDVFNIQEDAVEIGKSRDEIKEVDSESSEDARK 180

Query: 181 --------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240
                         PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE
Sbjct: 181 LEKEEQELTAILKGPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 352
           EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 360

[Close]

BLAST of Carg23172 vs. ExPASy TrEMBL
Match: A0A6J1DZS9 (28S ribosomal protein S9, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111026113 PE=3 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.7e-165
Identity = 304/397 (76.57%), Postives = 328/397 (82.62%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSHF+LL LISTKPP QSP F LLPRFFS+++NGSNNNK+ GSRDQPTSNVW
Sbjct: 1   MLSRLLPKPSHFKLLALISTKPPPQSPSFRLLPRFFSTNDNGSNNNKSSGSRDQPTSNVW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           KLS+E+D NFDQLFTQ+ +NLDGIAEDDSA  +DDSWVRS+DGD+GA GD+FA +EKEI+
Sbjct: 61  KLSQENDGNFDQLFTQDVENLDGIAEDDSAAVDDDSWVRSKDGDRGAEGDVFASMEKEIQ 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           GNKD  G NEWV A K+EPW LVEEEKS                                
Sbjct: 121 GNKDGAGDNEWVTAKKYEPWSLVEEEKSDVFNIEEYTVEIGESRDESREVDGGSSEDAKK 180

Query: 181 --------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYE 240
                         PN  FGDLIAASGITDDMLDSLIALKDLEGVEGLPPL+ +EDMRYE
Sbjct: 181 LEKEEQELTAVLKGPNCTFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLTEIEDMRYE 240

Query: 241 KNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDK 300
           KNTRKSSRAEIERQKQEEVAKARVRQ+DDKGRAYGTGRRKCSIARVW+QPGDGKF+VNDK
Sbjct: 241 KNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGDGKFIVNDK 300

Query: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPD 352
           EFDVYFPMLDSRAALLRPFSETKTLGLWDV CTVKGGGT+GQVGA+QLGISRALQNWEPD
Sbjct: 301 EFDVYFPMLDSRAALLRPFSETKTLGLWDVTCTVKGGGTSGQVGAVQLGISRALQNWEPD 360

[Close]

BLAST of Carg23172 vs. ExPASy TrEMBL
Match: A0A1S3ATW2 (28S ribosomal protein S9, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482908 PE=3 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 2.8e-162
Identity = 298/405 (73.58%), Postives = 326/405 (80.49%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSH RLL LISTKPPAQ+P FHLLPRFFS++NNGSNNN N GSRDQPTSN+W
Sbjct: 1   MLSRLLPKPSHIRLLALISTKPPAQTPSFHLLPRFFSTNNNGSNNNNNSGSRDQPTSNIW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           K+S+E+DENFD+LFTQEADNLDGIAE+DSAP NDDSWV S+ GD+ A GDIFA +EKE++
Sbjct: 61  KISQENDENFDKLFTQEADNLDGIAEEDSAPRNDDSWVTSKSGDRDAEGDIFASLEKEVQ 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           GNKD DG + W    KF+ W LVE+EKS                                
Sbjct: 121 GNKDGDGYDGWPMEKKFDVWSLVEDEKSDVFNIEEGGGKIGEFRDELKEVDTESIEDARK 180

Query: 181 ----------------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLS 240
                                 P+RAFGDLIAASGITDDM+DSL+ALKDLEG+EGLPPLS
Sbjct: 181 LEKENAMKLEREEQELTAILKGPDRAFGDLIAASGITDDMIDSLMALKDLEGIEGLPPLS 240

Query: 241 VLEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGD 300
            +EDMRYEKNTRKSSRAEIERQKQEEVAKARVRQ+DDKGRAYGTGRRKCSIARVW+QPG+
Sbjct: 241 EIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDDKGRAYGTGRRKCSIARVWIQPGN 300

Query: 301 GKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISR 352
           GKF+VNDKEFDVYFPMLDSRA LL+PF+ETKTLGLWDV CTVKGGGTTGQVGAIQLGISR
Sbjct: 301 GKFIVNDKEFDVYFPMLDSRAVLLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISR 360

[Close]

BLAST of Carg23172 vs. ExPASy TrEMBL
Match: A0A0A0KNH1 (Ribosomal protein S9 OS=Cucumis sativus OX=3659 GN=Csa_5G141060 PE=3 SV=1)

HSP 1 Score: 571.2 bits (1471), Expect = 2.9e-159
Identity = 294/405 (72.59%), Postives = 323/405 (79.75%), Query Frame = 0


Query: 1   MLPRLLPKPSHFRLLTLISTKPPAQSPRFHLLPRFFSSSNNGSNNNKNGGSRDQPTSNVW 60
           ML RLLPKPSH RLL LISTKPPAQ+P F LLPRFFS++NNGSNNN N GS+DQPTSN+W
Sbjct: 1   MLSRLLPKPSHVRLLALISTKPPAQTPSFQLLPRFFSTNNNGSNNNNNSGSKDQPTSNIW 60

Query: 61  KLSRESDENFDQLFTQEADNLDGIAEDDSAPANDDSWVRSEDGDQGAAGDIFARVEKEIR 120
           K+S+E+DENFDQLFTQEADNLDGIAE+DSAP  DDSWV S+ GDQ A GD+FA +EKE++
Sbjct: 61  KISQENDENFDQLFTQEADNLDGIAEEDSAPRKDDSWVTSKSGDQDAEGDLFASLEKEVQ 120

Query: 121 GNKDDDGANEWVAATKFEPWGLVEEEKS-------------------------------- 180
           GNKD    +EW    KF+ W LVEEEKS                                
Sbjct: 121 GNKDGVSHDEWPMEKKFDVWSLVEEEKSDVFNIEEGEVKIGEFGDGLKEVDTESSEDARK 180

Query: 181 ----------------------PNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLS 240
                                 PNRAFGDLIAASG TDDM+DSL+ALKDLEG+EGLPPL+
Sbjct: 181 LEKENAMKLEKEEQELTAVLKGPNRAFGDLIAASGFTDDMIDSLMALKDLEGIEGLPPLT 240

Query: 241 VLEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGD 300
            +EDMRYEKNTRKSSRAEIERQKQEEVAKARVRQ+D+KGRAYGTGRRKCSIARVW+QPG+
Sbjct: 241 EIEDMRYEKNTRKSSRAEIERQKQEEVAKARVRQVDNKGRAYGTGRRKCSIARVWIQPGN 300

Query: 301 GKFVVNDKEFDVYFPMLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISR 352
           GKFVVNDKEFDVYFPMLDSRA LL+PF+ETKTLGLWDV CTVKGGGTTGQVGAIQLGISR
Sbjct: 301 GKFVVNDKEFDVYFPMLDSRAILLQPFAETKTLGLWDVSCTVKGGGTTGQVGAIQLGISR 360

[Close]

BLAST of Carg23172 vs. TAIR 10
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein )

HSP 1 Score: 351.7 bits (901), Expect = 7.0e-97
Identity = 172/210 (81.90%), Postives = 193/210 (91.90%), Query Frame = 0


Query: 142 LVEEEKSPNRAFGDLIAASGITDDMLDSLIALKDLEGVEGLPPLSVLEDMRYEKNTRKSS 201
           L+E  K P+RAFGDLIA SGITD+MLDSLIALKD +GVEGLPPL+ +E++R EK+++KSS
Sbjct: 221 LLEVIKGPDRAFGDLIAKSGITDEMLDSLIALKDFQGVEGLPPLTEIENLRREKSSKKSS 280

Query: 202 RAEIERQKQEEVAKARVRQIDDKGRAYGTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFP 261
           RAEIE Q QE++AKARVRQ+D+ GRAYGTGRRKCSIARVW+QPG+GKF VN+KEFDVYFP
Sbjct: 281 RAEIELQMQEDIAKARVRQVDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEFDVYFP 340

Query: 262 MLDSRAALLRPFSETKTLGLWDVKCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRA 321
           MLD RAALLRP +ETKTLG WD+KCTVKGGGTTGQVGAIQLGISRALQNWEPD R  LRA
Sbjct: 341 MLDHRAALLRPLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNWEPDMRTSLRA 400

Query: 322 SGFLTRDSRVVERKKPGKAKARKSFQWVKR 352
           +GFLTRDSRVVERKKPGKAKARKSFQWVKR
Sbjct: 401 AGFLTRDSRVVERKKPGKAKARKSFQWVKR 430

[Close]

BLAST of Carg23172 vs. TAIR 10
Match: AT1G74970.1 (ribosomal protein S9 )

HSP 1 Score: 96.3 bits (238), Expect = 5.3e-20
Identity = 59/127 (46.46%), Postives = 75/127 (59.06%), Query Frame = 0


Query: 229 GTGRRKCSIARVWVQPGDGKFVVNDKEFDVYFPMLDSRAALLRPFS-ETKTLGL---WDV 288
           GTGRRKC+IARV +Q G GK ++N ++   Y   L      L+       TLG    +D+
Sbjct: 85  GTGRRKCAIARVVLQEGTGKVIINYRDAKEY---LQGNPLWLQYVKVPLVTLGYENSYDI 144

Query: 289 KCTVKGGGTTGQVGAIQLGISRALQNWEPDFRPPLRASGFLTRDSRVVERKKPGKAKARK 348
                GGG +GQ  AI LG++RAL     D R PL+  G LTRD+RVVERKK G  KARK
Sbjct: 145 FVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLLTRDARVVERKKAGLKKARK 204

Query: 349 SFQWVKR 352
           + Q+ KR
Sbjct: 205 APQFSKR 208

The following BLAST results are available for this feature:

BLAST of Carg23172 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016858.1	3.6e-196	100.00	rpsI, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6579377.1	1.2e-188	88.16	30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023550446.1	1.4e-187	87.66	28S ribosomal protein S9, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022922373.1	5.2e-187	87.66	28S ribosomal protein S9, mitochondrial [Cucurbita moschata]	[more]
XP_022972996.1	2.4e-184	86.15	28S ribosomal protein S9, mitochondrial [Cucurbita maxima]	[more]

BLAST of Carg23172 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L6Z4	9.8e-96	81.90	30S ribosomal protein S9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS9M...	[more]
A8I7Z9	6.0e-37	55.80	30S ribosomal protein S9 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 59...	[more]
A7INH2	1.8e-36	53.62	30S ribosomal protein S9 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / P...	[more]
A9IVX6	2.3e-36	53.47	30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) ...	[more]
B2S535	8.7e-36	53.85	30S ribosomal protein S9 OS=Brucella abortus (strain S19) OX=430066 GN=rpsI PE=3...	[more]

BLAST of Carg23172 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6E6	2.5e-187	87.66	28S ribosomal protein S9, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1I7H1	1.2e-184	86.15	28S ribosomal protein S9, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471...	[more]
A0A6J1DZS9	2.7e-165	76.57	28S ribosomal protein S9, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A1S3ATW2	2.8e-162	73.58	28S ribosomal protein S9, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103482908 ...	[more]
A0A0A0KNH1	2.9e-159	72.59	Ribosomal protein S9 OS=Cucumis sativus OX=3659 GN=Csa_5G141060 PE=3 SV=1	[more]

BLAST of Carg23172 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49080.1	7.0e-97	81.90	Ribosomal protein S5 domain 2-like superfamily protein	[more]
AT1G74970.1	5.3e-20	46.46	ribosomal protein S9	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 231..351 e-value: 5.4E-48 score: 162.5
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 136..351
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 218..351 e-value: 5.3E-51 score: 174.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..58
None	No IPR available	PANTHER	PTHR21569:SF1	28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL	coord: 136..351
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 290..308
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 222..351 score: 28.667297
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 226..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23172-RA	Carg23172-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome