Carg23140 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg23140
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionTPR_REGION domain-containing protein
LocationCarg_Chr08: 3311990 .. 3313540 (-)
RNA-Seq ExpressionCarg23140
SyntenyCarg23140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGCTGTTGAGAAATTCTTCAACCCCAATTCTTAATTCTTGGCTTCACCAATCCAAATCCTCCCCTTCAGAATCGGACCAAATCCTCCCGTTTCGAAGAACCAAATCGCTTTCGTTTACAGCCTCTTTTCACCCTCCACCGCCTTTATCGAATGATTCAGCGAAGAGGGTAACCCAAAATCTGCTAGAATTAGATACTACAGATCCCAGAAAGAAGATTTCATTACCCAAGAGCTGTAAATTTCAATCGGAAGTGAAATCAGTTCGAGATCAAGATCTCAGACCCACTTCAGATTCGCCGTCGTCTTCGATTTCCTGGAGTGTTTTTGAATTCTGGGTTGGGTCTGAAAGTGCCAAATGATGAGGTTCGCGATGAATGCGTTCTGCAGATGCTGGTGGTCGACGGCGGAACGGGAAGCGACGGCGGCCGGGTGTGTGGCGGAGGAGGAGGTGGAAGCGGCGGAAGAGGTTCCAACGGCGGTGGTGGAGGGGATTCTGATAAGTCAGGGTTTAACAATAGCACAGATGCTTATTATCAGAAGATGATTGAAGCCAACCCTAACAATGCTCTTCTACTTGGAAATTATGCTAAGTTCTTGAAAAAGGTACTTCAATTAGCTTGACATCTCTTGGAAATTTCTTCAATGGCAGCCCCTTCTGATTCTGCTCTGCCGTTTAGGTTCATGGAGATTTTGCCAAAGCCGAAGAGTTTTGTGAAAGGGCAATTCTGGCTGATCCAAATGATTCAAGTGTTCTATCGCTTTATGCTGATCTTATTTGGCATACACAGAAGGATGCTCAACGAGCTGTGACCTATTTTGATCAAGCTGTTCAAAGTTCCCCTGATGATTGGTAAGAATCTGAAAGCATTTAAGTTGATTTCTTAGCTCAGTTAGAACAGATTGGAAATCTTATCTTGTGGGCTGATTGATTCTGGTTCATTTGTTTACTTTTGATTGATTTTGATGATGGATCAAGTTGATTATGGCCATGAATACAAGAACATGAACAGATTCTGAGTTCAGTTTTGATATCGATTCCATTCTTGTTTGTGTCATTTCTTCAAGAGTTTAGACAGATATCTCTGTTCATATATGGATCAAGTTGATTATGGTTATGAATACAAGAACATGAACAGATTCGGAGTTCAATTTCGATATCGATTCCATTCTTGATTGAGTCATTTCTTCAAGAGTTGACATAGCTATCTCTGTTCATATATGGATCATGTTACATTTCATAATTGGAATCTCTCAATGAGGCTTGTTAAGTTATGTCATACAAGTTCTTGTTCAAGCATTGAAATGGAGAGAATCTTTCTTAGCTGTTTGCTTCTCTGTTTGTGATATTGCTTCAAAATTGATTTAGTTGCAAATCTTTCTCTATTTACAGCTATCTTCTAGCTTCATACGCACGGTTTCTCTGGGATACCGATGTCGACGAAGAAGACGATATGCCCCAGCAGTATGAAACAGAGGAAAGGCATCCGTCTCGGCCCGGTTTCTCACATGGAGCTCCTCACCATTCTCCTCTGGCTGCATCTTCCTAA

mRNA sequence

ATGATGCTGTTGAGAAATTCTTCAACCCCAATTCTTAATTCTTGGCTTCACCAATCCAAATCCTCCCCTTCAGAATCGGACCAAATCCTCCCGTTTCGAAGAACCAAATCGCTTTCGTTTACAGCCTCTTTTCACCCTCCACCGCCTTTATCGAATGATTCAGCGAAGAGGGTAACCCAAAATCTGCTAGAATTAGATACTACAGATCCCAGAAAGAAGATTTCATTACCCAAGAGCTGTAAATTTCAATCGGAATTCGAGATCAAGATCTCAGACCCACTTCAGATTCGCCGTCGTCTTCGATTTCCTGGAGTGTTTTTGAATTCTGGGTTGGGTCTGAAAGTGCCAAATGATGAGGTTCGCGATGAATGCGTTCTGCAGATGCTGGTGGTCGACGGCGGAACGGGAAGCGACGGCGGCCGGGTGTGTGGCGGAGGAGGAGGTGGAAGCGGCGGAAGAGGTTCCAACGGCGGTGGTGGAGGGGATTCTGATAAGTCAGGGTTTAACAATAGCACAGATGCTTATTATCAGAAGATGATTGAAGCCAACCCTAACAATGCTCTTCTACTTGGAAATTATGCTAAGTTCTTGAAAAAGGTTCATGGAGATTTTGCCAAAGCCGAAGAGTTTTGTGAAAGGGCAATTCTGGCTGATCCAAATGATTCAAGTGTTCTATCGCTTTATGCTGATCTTATTTGGCATACACAGAAGGATGCTCAACGAGCTGTGACCTATTTTGATCAAGCTGTTCAAAGTTCCCCTGATGATTGCTATCTTCTAGCTTCATACGCACGGTTTCTCTGGGATACCGATGTCGACGAAGAAGACGATATGCCCCAGCAGTATGAAACAGAGGAAAGGCATCCGTCTCGGCCCGGTTTCTCACATGGAGCTCCTCACCATTCTCCTCTGGCTGCATCTTCCTAA

Coding sequence (CDS)

ATGATGCTGTTGAGAAATTCTTCAACCCCAATTCTTAATTCTTGGCTTCACCAATCCAAATCCTCCCCTTCAGAATCGGACCAAATCCTCCCGTTTCGAAGAACCAAATCGCTTTCGTTTACAGCCTCTTTTCACCCTCCACCGCCTTTATCGAATGATTCAGCGAAGAGGGTAACCCAAAATCTGCTAGAATTAGATACTACAGATCCCAGAAAGAAGATTTCATTACCCAAGAGCTGTAAATTTCAATCGGAATTCGAGATCAAGATCTCAGACCCACTTCAGATTCGCCGTCGTCTTCGATTTCCTGGAGTGTTTTTGAATTCTGGGTTGGGTCTGAAAGTGCCAAATGATGAGGTTCGCGATGAATGCGTTCTGCAGATGCTGGTGGTCGACGGCGGAACGGGAAGCGACGGCGGCCGGGTGTGTGGCGGAGGAGGAGGTGGAAGCGGCGGAAGAGGTTCCAACGGCGGTGGTGGAGGGGATTCTGATAAGTCAGGGTTTAACAATAGCACAGATGCTTATTATCAGAAGATGATTGAAGCCAACCCTAACAATGCTCTTCTACTTGGAAATTATGCTAAGTTCTTGAAAAAGGTTCATGGAGATTTTGCCAAAGCCGAAGAGTTTTGTGAAAGGGCAATTCTGGCTGATCCAAATGATTCAAGTGTTCTATCGCTTTATGCTGATCTTATTTGGCATACACAGAAGGATGCTCAACGAGCTGTGACCTATTTTGATCAAGCTGTTCAAAGTTCCCCTGATGATTGCTATCTTCTAGCTTCATACGCACGGTTTCTCTGGGATACCGATGTCGACGAAGAAGACGATATGCCCCAGCAGTATGAAACAGAGGAAAGGCATCCGTCTCGGCCCGGTTTCTCACATGGAGCTCCTCACCATTCTCCTCTGGCTGCATCTTCCTAA

Protein sequence

MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQNLLELDTTDPRKKISLPKSCKFQSEFEIKISDPLQIRRRLRFPGVFLNSGLGLKVPNDEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHGAPHHSPLAASS
Homology
BLAST of Carg23140 vs. NCBI nr
Match: KAG7025738.1 (hypothetical protein SDJN02_12236, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 604.7 bits (1558), Expect = 4.3e-169
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0

Query: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60
           MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ
Sbjct: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60

Query: 61  NLLELDTTDPRKKISLPKSCKFQSEFEIKISDPLQIRRRLRFPGVFLNSGLGLKVPNDEV 120
           NLLELDTTDPRKKISLPKSCKFQSEFEIKISDPLQIRRRLRFPGVFLNSGLGLKVPNDEV
Sbjct: 61  NLLELDTTDPRKKISLPKSCKFQSEFEIKISDPLQIRRRLRFPGVFLNSGLGLKVPNDEV 120

Query: 121 RDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQKMI 180
           RDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQKMI
Sbjct: 121 RDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQKMI 180

Query: 181 EANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQKDAQ 240
           EANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQKDAQ
Sbjct: 181 EANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQKDAQ 240

Query: 241 RAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHGAPH 300
           RAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHGAPH
Sbjct: 241 RAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHGAPH 300

Query: 301 HSPLAASS 309
           HSPLAASS
Sbjct: 301 HSPLAASS 308

BLAST of Carg23140 vs. NCBI nr
Match: KAG6593391.1 (hypothetical protein SDJN03_12867, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 564.3 bits (1453), Expect = 6.4e-157
Identity = 293/311 (94.21%), Postives = 296/311 (95.18%), Query Frame = 0

Query: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60
           MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ
Sbjct: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60

Query: 61  NLLELDTTDPRKKISLPKSCKFQSEFE-IKISD--PLQIRRRLRFPGVFLNSGLGLKVPN 120
           NLLELDTTDPRKKISLPKSCKFQSE + ++  D  P         PGVFLNSGLGLKVPN
Sbjct: 61  NLLELDTTDPRKKISLPKSCKFQSEVKSVRDQDLRPTSDSPSSSIPGVFLNSGLGLKVPN 120

Query: 121 DEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ 180
           DEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ
Sbjct: 121 DEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ 180

Query: 181 KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240
           KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK
Sbjct: 181 KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240

Query: 241 DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300
           DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG
Sbjct: 241 DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300

Query: 301 APHHSPLAASS 309
           APHHSPLAASS
Sbjct: 301 APHHSPLAASS 311

BLAST of Carg23140 vs. NCBI nr
Match: XP_022960357.1 (uncharacterized protein LOC111461108 [Cucurbita moschata])

HSP 1 Score: 551.2 bits (1419), Expect = 5.6e-153
Identity = 288/311 (92.60%), Postives = 292/311 (93.89%), Query Frame = 0

Query: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60
           MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ
Sbjct: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60

Query: 61  NLLELDTTDPRKKISLPKSCKFQSEFE-IKISD--PLQIRRRLRFPGVFLNSGLGLKVPN 120
           NLLELD TDPRKKISLPKS KFQS  + ++  D  P         PGVFLNSGLGLKVPN
Sbjct: 61  NLLELDITDPRKKISLPKSSKFQSGVKSVRDQDLRPTSDSPSSSIPGVFLNSGLGLKVPN 120

Query: 121 DEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ 180
           DEVRDECVLQMLVVD GTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFN+STDAYYQ
Sbjct: 121 DEVRDECVLQMLVVDAGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNHSTDAYYQ 180

Query: 181 KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240
           KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK
Sbjct: 181 KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240

Query: 241 DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300
           DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG
Sbjct: 241 DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300

Query: 301 APHHSPLAASS 309
           APHHSPLAASS
Sbjct: 301 APHHSPLAASS 311

BLAST of Carg23140 vs. NCBI nr
Match: XP_023004356.1 (uncharacterized protein LOC111497699 [Cucurbita maxima])

HSP 1 Score: 530.8 bits (1366), Expect = 7.9e-147
Identity = 279/311 (89.71%), Postives = 284/311 (91.32%), Query Frame = 0

Query: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60
           MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLS T SFH PPPLSNDSAKRVTQ
Sbjct: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSLTPSFHLPPPLSNDSAKRVTQ 60

Query: 61  NLLELDTTDPRKKISLPKSCKFQSEF-EIKISD--PLQIRRRLRFPGVFLNSGLGLKVPN 120
           NLLELD TDPRKKISLPKS  FQS    ++  D  P          GVFLNSGLGLKVPN
Sbjct: 61  NLLELDITDPRKKISLPKSYNFQSGVRSVRDQDLRPTSDSPSSSISGVFLNSGLGLKVPN 120

Query: 121 DEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ 180
           DEVRDECVLQMLV+ GGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ
Sbjct: 121 DEVRDECVLQMLVIGGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ 180

Query: 181 KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240
           KMIEANPNNALLLGNYAKFLKKV+GDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK
Sbjct: 181 KMIEANPNNALLLGNYAKFLKKVNGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240

Query: 241 DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300
           DAQRA TYFDQAV+SSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG
Sbjct: 241 DAQRAATYFDQAVKSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300

Query: 301 APHHSPLAASS 309
           APHH PLAASS
Sbjct: 301 APHHPPLAASS 311

BLAST of Carg23140 vs. NCBI nr
Match: XP_023515176.1 (class E basic helix-loop-helix protein 22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 507.7 bits (1306), Expect = 7.1e-140
Identity = 272/317 (85.80%), Postives = 277/317 (87.38%), Query Frame = 0

Query: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60
           MMLLRNSSTPILNSWLHQSKSSPSESDQ LPFRRTKSLS T SFHPPP LSNDS KRVTQ
Sbjct: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQFLPFRRTKSLSLTPSFHPPPSLSNDSVKRVTQ 60

Query: 61  NLLELDTTDPRKKISLPKSCKFQSEFEIKISDPLQIRRRLR---------FPGVFLNSGL 120
           NLLELD TDPRKKI +PKS KFQ E + K +      + LR          PG FLNSGL
Sbjct: 61  NLLELDITDPRKKIPVPKSWKFQPEVKSKENGVSVRDQDLRPTSDSPSSSIPGEFLNSGL 120

Query: 121 GLKVPNDEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNS 180
           GLKVPNDEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNS
Sbjct: 121 GLKVPNDEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNS 180

Query: 181 TDAYYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADL 240
           TDAYYQKMIEANP+NALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADL
Sbjct: 181 TDAYYQKMIEANPDNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADL 240

Query: 241 IWHTQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSR 300
           IWHTQKDAQRA TYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDM QQYETEERH SR
Sbjct: 241 IWHTQKDAQRAATYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMAQQYETEERHTSR 300

Query: 301 PGFSHGAPHHSPLAASS 309
           PGFSH       LAASS
Sbjct: 301 PGFSH-------LAASS 310

BLAST of Carg23140 vs. ExPASy TrEMBL
Match: A0A6J1H767 (uncharacterized protein LOC111461108 OS=Cucurbita moschata OX=3662 GN=LOC111461108 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 2.7e-153
Identity = 288/311 (92.60%), Postives = 292/311 (93.89%), Query Frame = 0

Query: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60
           MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ
Sbjct: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60

Query: 61  NLLELDTTDPRKKISLPKSCKFQSEFE-IKISD--PLQIRRRLRFPGVFLNSGLGLKVPN 120
           NLLELD TDPRKKISLPKS KFQS  + ++  D  P         PGVFLNSGLGLKVPN
Sbjct: 61  NLLELDITDPRKKISLPKSSKFQSGVKSVRDQDLRPTSDSPSSSIPGVFLNSGLGLKVPN 120

Query: 121 DEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ 180
           DEVRDECVLQMLVVD GTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFN+STDAYYQ
Sbjct: 121 DEVRDECVLQMLVVDAGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNHSTDAYYQ 180

Query: 181 KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240
           KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK
Sbjct: 181 KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240

Query: 241 DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300
           DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG
Sbjct: 241 DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300

Query: 301 APHHSPLAASS 309
           APHHSPLAASS
Sbjct: 301 APHHSPLAASS 311

BLAST of Carg23140 vs. ExPASy TrEMBL
Match: A0A6J1KRW4 (uncharacterized protein LOC111497699 OS=Cucurbita maxima OX=3661 GN=LOC111497699 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 3.8e-147
Identity = 279/311 (89.71%), Postives = 284/311 (91.32%), Query Frame = 0

Query: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQ 60
           MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLS T SFH PPPLSNDSAKRVTQ
Sbjct: 1   MMLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSLTPSFHLPPPLSNDSAKRVTQ 60

Query: 61  NLLELDTTDPRKKISLPKSCKFQSEF-EIKISD--PLQIRRRLRFPGVFLNSGLGLKVPN 120
           NLLELD TDPRKKISLPKS  FQS    ++  D  P          GVFLNSGLGLKVPN
Sbjct: 61  NLLELDITDPRKKISLPKSYNFQSGVRSVRDQDLRPTSDSPSSSISGVFLNSGLGLKVPN 120

Query: 121 DEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ 180
           DEVRDECVLQMLV+ GGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ
Sbjct: 121 DEVRDECVLQMLVIGGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQ 180

Query: 181 KMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240
           KMIEANPNNALLLGNYAKFLKKV+GDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK
Sbjct: 181 KMIEANPNNALLLGNYAKFLKKVNGDFAKAEEFCERAILADPNDSSVLSLYADLIWHTQK 240

Query: 241 DAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300
           DAQRA TYFDQAV+SSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG
Sbjct: 241 DAQRAATYFDQAVKSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGFSHG 300

Query: 301 APHHSPLAASS 309
           APHH PLAASS
Sbjct: 301 APHHPPLAASS 311

BLAST of Carg23140 vs. ExPASy TrEMBL
Match: A0A5A7UU96 (Aspartate, glycine, lysine and serine-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002010 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.4e-117
Identity = 237/327 (72.48%), Postives = 263/327 (80.43%), Query Frame = 0

Query: 2   MLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFH-PPPPLSNDSAKRVTQ 61
           MLLR SSTPILNSWLHQSKSSPSESDQI   +RTKS+S T+SFH PPP  SN+S  RVTQ
Sbjct: 1   MLLRTSSTPILNSWLHQSKSSPSESDQIHHLQRTKSISLTSSFHLPPPSFSNESPNRVTQ 60

Query: 62  NLLELDTTDPRKKISLPKSCKFQSEFEIKISDPLQIRRRLRFP----------GVFLNSG 121
           NLLE D+ DPRKKI +PKS + QS+ + K  + + +R +   P          GVFLNSG
Sbjct: 61  NLLESDSRDPRKKIPIPKSSEVQSKVKSK-ENGVSVRDQHLKPTSDSSSSSIHGVFLNSG 120

Query: 122 LGLKVPNDEV----RDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKS 181
           LGLK PNDEV    RD C+LQ LVV GG G+DGGRVCGG      GRGS+GGGGGD+ +S
Sbjct: 121 LGLKFPNDEVCDEKRDGCILQTLVVGGGMGNDGGRVCGG-----SGRGSDGGGGGDNGRS 180

Query: 182 GFN-----NSTDAYYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPND 241
           GFN     NSTDAYYQKMIEANPNNALLLGNYAKFLK+VHGDF+KAEEFC RAILADPND
Sbjct: 181 GFNNHHGSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPND 240

Query: 242 SSVLSLYADLIWHTQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQ 301
           +SVLSLYADLIWHTQ+DAQRA TYFDQAV+S+PDDCYLLASYARFLWDT+VDEEDD   Q
Sbjct: 241 ASVLSLYADLIWHTQRDAQRAETYFDQAVKSAPDDCYLLASYARFLWDTEVDEEDDTEDQ 300

Query: 302 YETEERHPSRPGFSHGAPHHSPLAASS 309
           YETEE H S PGFSHGAPHHSPLAA+S
Sbjct: 301 YETEESHRSHPGFSHGAPHHSPLAATS 321

BLAST of Carg23140 vs. ExPASy TrEMBL
Match: A0A1S3CF71 (uncharacterized protein LOC103499799 OS=Cucumis melo OX=3656 GN=LOC103499799 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 1.8e-117
Identity = 236/326 (72.39%), Postives = 260/326 (79.75%), Query Frame = 0

Query: 2   MLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFH-PPPPLSNDSAKRVTQ 61
           MLLR SSTPILNSWLHQSKSSPSESDQI   +RTKS+S T+SFH PPP  SN+S  RVTQ
Sbjct: 1   MLLRTSSTPILNSWLHQSKSSPSESDQIHHLQRTKSISLTSSFHLPPPSFSNESPNRVTQ 60

Query: 62  NLLELDTTDPRKKISLPKSCKFQSEFE-----IKISD----PLQIRRRLRFPGVFLNSGL 121
           NLLE D+ DPRKKI +PKS + QS+ +     + + D    P          GVFLNSGL
Sbjct: 61  NLLESDSRDPRKKIPIPKSSEVQSKVKPKENGVSVRDQHLKPTSDSSSSSIHGVFLNSGL 120

Query: 122 GLKVPNDEV----RDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSG 181
           GLK PNDEV    RD C+LQ LVV GG G+DGGRVCGG      GRGS+GGGGGD+ +SG
Sbjct: 121 GLKFPNDEVCDEKRDGCILQTLVVGGGMGNDGGRVCGG-----SGRGSDGGGGGDNGRSG 180

Query: 182 FN-----NSTDAYYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDS 241
           FN     NSTDAYYQKMIEANPNNALLLGNYAKFLK+VHGDF+KAEEFC RAILADPND+
Sbjct: 181 FNNHHGSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDA 240

Query: 242 SVLSLYADLIWHTQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQY 301
           SVLSLYADLIWHTQ+DAQRA TYFDQAV+S+PDDCYLLASYARFLWDT+VDEEDD   QY
Sbjct: 241 SVLSLYADLIWHTQRDAQRAETYFDQAVKSAPDDCYLLASYARFLWDTEVDEEDDTEDQY 300

Query: 302 ETEERHPSRPGFSHGAPHHSPLAASS 309
           ETEE H S PGFSHGAPHHSPLAA+S
Sbjct: 301 ETEESHRSHPGFSHGAPHHSPLAATS 321

BLAST of Carg23140 vs. ExPASy TrEMBL
Match: A0A0A0K6Z4 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432550 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.6e-114
Identity = 230/324 (70.99%), Postives = 256/324 (79.01%), Query Frame = 0

Query: 2   MLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFH-PPPPLSNDSAKRVTQ 61
           MLLR +STPILNSWLHQ KSSPSES+QI   +RTKS+S  +SFH PPP +S +S+ RVTQ
Sbjct: 1   MLLRTNSTPILNSWLHQFKSSPSESNQIHHLQRTKSISLISSFHLPPPSVSTESSNRVTQ 60

Query: 62  NLLELDTTDPRKKISLPKSCKFQ---SEFEIKISD----PLQIRRRLRFPGVFLNSGLGL 121
           NLLE D+TDPRKKI + KS K +    E  + + D    P          GVFLNSGLGL
Sbjct: 61  NLLESDSTDPRKKIPITKSSKVKVKSRENGVSVRDQHLKPTSDSSSSSIHGVFLNSGLGL 120

Query: 122 KVPNDEV----RDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFN 181
           K PNDEV    RD C+LQ LVV GG G+DGGRVCGG      GRGS+GGGGGD+ +SGFN
Sbjct: 121 KFPNDEVCDEKRDACILQTLVVGGGMGNDGGRVCGG-----SGRGSDGGGGGDNGRSGFN 180

Query: 182 -----NSTDAYYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSV 241
                NSTDAYYQKMIEANPNNALLLGNYAKFLK+VHGDF+KAEEFC RAILADPND+SV
Sbjct: 181 NHHGSNSTDAYYQKMIEANPNNALLLGNYAKFLKEVHGDFSKAEEFCGRAILADPNDASV 240

Query: 242 LSLYADLIWHTQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYET 301
           LSLYADLIWHTQ+DA+RA TYFDQAV+S+PDDCYLLASYARFLWDTDVD EDD   QYET
Sbjct: 241 LSLYADLIWHTQRDARRAETYFDQAVKSAPDDCYLLASYARFLWDTDVDNEDDTEDQYET 300

Query: 302 EERHPSRPGFSHGAPHHSPLAASS 309
           EE HP  PGFSHGAPHHSPLAA+S
Sbjct: 301 EESHPLHPGFSHGAPHHSPLAATS 319

BLAST of Carg23140 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 2.7e-44
Identity = 132/327 (40.37%), Postives = 179/327 (54.74%), Query Frame = 0

Query: 2   MLLRNSSTPILNSWLHQ---SKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRV 61
           MLLR++S PILNSWL Q    +SSP    Q+  +RR+ SLS  +S            + +
Sbjct: 1   MLLRSTSAPILNSWLPQHCSRESSPEPESQL--WRRSTSLSLFSSKSIDGHTGEQLHQAL 60

Query: 62  TQN--LLELDTTDPRKKISLPKSCKFQ---------SEFEIKISDPLQIRRRLRFPGVFL 121
           + N  ++ L +         P S + +         ++  +  S P  + R      +F 
Sbjct: 61  SDNKEIIILKSKSNEHSYKTPTSSRQRRSSLDETRYTKKTLDRSSPFLVER------LFS 120

Query: 122 NSGLGLKVPNDEVRDECVLQMLVV--DGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDK 181
           +SG G K  +++      L+ LV    GG G  GG +C  GGGG GG G +GG   D   
Sbjct: 121 SSGQGDKASSND-----RLETLVSGGGGGMGGSGGNIC-NGGGGVGGSGVDGGRSED--- 180

Query: 182 SGFNNSTDAYYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVL 241
                +TD YY++MI++NP N+LL GNYAKFLK+V GD  KAEE+CERAIL + ND +VL
Sbjct: 181 -----ATDTYYREMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVL 240

Query: 242 SLYADLIWHTQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDM----PQQ 301
           SLYADLI H  +D QRA +Y+ QAV+ SP+DCY+ ASYARFLWD D DEED+      + 
Sbjct: 241 SLYADLILHNHQDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEEEN 300

Query: 302 YETEERHPSRPGFSHGAPHHSPLAASS 309
              E  H          P H+ + ASS
Sbjct: 301 LSDETGHVPPTTMFRDFPQHTSITASS 305

BLAST of Carg23140 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-41
Identity = 128/317 (40.38%), Postives = 185/317 (58.36%), Query Frame = 0

Query: 2   MLLRNSSTPILNSWLHQS--KSSPSES-DQILPFRRTKSLSFTAS----FHPPPPL--SN 61
           MLLR++STP+LNS +H S  + SP E+ + +   +R +S++ +AS     + P  +  S+
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 62  DSAKRVTQNLLELDTTDPRKKISLPKSCKFQSEFEIKISDPLQIRRRLRFPGVFLNSGLG 121
           DS++R+ +   + D        + P   KF S   +       +   + F  +  +S  G
Sbjct: 61  DSSRRMKRTASDSDLR--HLTSTKPPVSKFLSGGALM----EDVDEGIGFGLIRTSSYDG 120

Query: 122 LKVPNDEVRDECVLQMLVVDGGTGSDGGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNST 181
           +    DE  +        V GG G  GG   GGG G SGGR S+GG GGD       ++T
Sbjct: 121 ISWALDEDTE--------VAGGGG--GGMFHGGGKGRSGGR-SDGGDGGD-------DNT 180

Query: 182 DAYYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLI 241
           D +Y+KMIEANP N + L NYAKFLK+V  D+ KAEE+C RAIL  PND +VL++YA+L+
Sbjct: 181 DVHYRKMIEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELV 240

Query: 242 WHTQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETE-ERHPSR 301
           W   KD+ RA  YF+QAV ++P+DCY+ ASYARFLWD + +EE++  +++E E E   SR
Sbjct: 241 WKIHKDSSRAENYFNQAVAAAPEDCYVQASYARFLWDAEEEEEEEKEERHEEELEHQTSR 290

Query: 302 PGFSHGAPHHSPLAASS 309
             F  G    SP+ A S
Sbjct: 301 MNFFTGP---SPITAMS 290

BLAST of Carg23140 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 136.3 bits (342), Expect = 4.0e-32
Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = 0

Query: 144 GGGGGGSGGRGSNGGGGGDSDKSGFNNSTDAYYQKMIEANPNNALLLGNYAKFLKKVHGD 203
           GG  GG GGRG +G GGG     G   S D YY++MI+  P + LLL NYA+FLK+V GD
Sbjct: 85  GGSNGGFGGRGGDGAGGGG---GGGGGSVDGYYEEMIQRYPGDTLLLSNYARFLKEVKGD 144

Query: 204 FAKAEEFCERAILADP-NDSSVLSLYADLIWHTQKDAQRAVTYFDQAVQSSPDDCYLLAS 263
             KAEE+CERA+L++   D  +LS+Y DLIW    D  RA +Y+DQAVQSSPDDC +LAS
Sbjct: 145 GRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDDCNVLAS 204

Query: 264 YARFLWDTDVDEEDDMPQQYE 284
           YARFLWD + + E++  + +E
Sbjct: 205 YARFLWDAEEEVEEEESKHHE 222

BLAST of Carg23140 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 4.9e-30
Identity = 104/292 (35.62%), Postives = 151/292 (51.71%), Query Frame = 0

Query: 2   MLLRNSSTPILNSWLHQSKSSPSESDQILPFRRTKSLSFTASFHPPPPLSNDSAKRVTQN 61
           +L+R  S P+L + L     S   S ++ P  RT S+   +S+           +R    
Sbjct: 4   LLMRTGSMPVLQNRL----ISGGSSRKMTPISRTNSVESLSSY----------GERFAGG 63

Query: 62  LLELDTTDPRKKISLPKSCKFQSEFEIKISDPLQIRRRLRFPGVFLNSGLGLKVPNDEVR 121
                      KIS+           +  SD ++  R L+  G   +     ++P D+  
Sbjct: 64  -----------KISIEVKANVGMRRVLSESDVIRSERMLKRVG---SKPSPARIPEDDEA 123

Query: 122 DECVLQML-----VVDGGTGSD-----GGRVCGGGGGGSGGRGSNGGGGGDSDKSGFNNS 181
            E  ++       ++ GG   +     GG V GGG G SGG G NGGGGG  DKS   + 
Sbjct: 124 GEEEIRFADGWGSMISGGLPVEEKCFTGGGV-GGGSGYSGGYG-NGGGGGYEDKSKIGD- 183

Query: 182 TDAYYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADL 241
              YY++M+ +NPNN+LLL NY KFL +V  D   AEE+  RAIL +P D   LS+Y  L
Sbjct: 184 ---YYREMLRSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRL 243

Query: 242 IWHTQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYE 284
           IW T++D +RA  YFDQAV +SP+DC +L SYARF+W+ + D++DD  ++ E
Sbjct: 244 IWETKRDEKRAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEE 261

BLAST of Carg23140 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 94.0 bits (232), Expect = 2.3e-19
Identity = 47/124 (37.90%), Postives = 76/124 (61.29%), Query Frame = 0

Query: 175 YYQKMIEANPNNALLLGNYAKFLKKVHGDFAKAEEFCERAILADPNDSSVLSLYADLIWH 234
           YY+ M+E  P + LLL NYAKFL +  GD + AEE+  +  + +P+D   L+ Y  L+  
Sbjct: 124 YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVALANYGRLVMK 183

Query: 235 TQKDAQRAVTYFDQAVQSSPDDCYLLASYARFLWDTDVDEEDDMPQQYETEERHPSRPGF 294
             +D  +A++YF++AVQ+SPDD  +LA+YA FLW+ + D++D+   + + E     +  F
Sbjct: 184 LHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDDDESSGQGKDEF 243

Query: 295 SHGA 299
              A
Sbjct: 244 EADA 246

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7025738.14.3e-169100.00hypothetical protein SDJN02_12236, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6593391.16.4e-15794.21hypothetical protein SDJN03_12867, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022960357.15.6e-15392.60uncharacterized protein LOC111461108 [Cucurbita moschata][more]
XP_023004356.17.9e-14789.71uncharacterized protein LOC111497699 [Cucurbita maxima][more]
XP_023515176.17.1e-14085.80class E basic helix-loop-helix protein 22-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1H7672.7e-15392.60uncharacterized protein LOC111461108 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
A0A6J1KRW43.8e-14789.71uncharacterized protein LOC111497699 OS=Cucurbita maxima OX=3661 GN=LOC111497699... [more]
A0A5A7UU961.4e-11772.48Aspartate, glycine, lysine and serine-rich protein-like OS=Cucumis melo var. mak... [more]
A0A1S3CF711.8e-11772.39uncharacterized protein LOC103499799 OS=Cucumis melo OX=3656 GN=LOC103499799 PE=... [more]
A0A0A0K6Z45.6e-11470.99TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432550 ... [more]
Match NameE-valueIdentityDescription
AT1G80130.12.7e-4440.37Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G20190.12.1e-4140.38Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G32340.14.0e-3253.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G17940.14.9e-3035.62Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04530.12.3e-1937.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14559TPR_19coord: 174..231
e-value: 2.8E-7
score: 30.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..308
NoneNo IPR availablePANTHERPTHR26312:SF73TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 2..299
NoneNo IPR availablePANTHERPTHR26312TETRATRICOPEPTIDE REPEAT PROTEIN 5coord: 2..299
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 165..284
e-value: 2.4E-15
score: 58.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 174..270

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23140-RACarg23140-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding