Carg23073 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23073
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH144-like
Location	Carg_Chr07: 683846 .. 685196 (-)
RNA-Seq Expression	Carg23073
Synteny	Carg23073

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACATTGGTGTAACGGGAAAGAGATTCAGAGCTGTCAAGGAAGTTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGGTAATAATACACCATCCTCTAGATCATTCTCCCATGCTTTGTATCTGGTACTTGTTGAATCATTGCAGCATATCCTTTTATCCAAAGATGAATTCCTAAAGCGCATTTGTTGAATGGCTTAATACTTACTGAGTTCACTTGCCTGTCTTTACTGCTATCATTATTGAGCTGCTGAAACACATCTTAAAGTGCTTTGTTGTTGATACCTTTCAATCTGTTCCCTACAGGCTGAGTATTTTCGACAATTGCTAAAACCCGTCACGTAGGATAACATTGCAAAAAGCATTTGGACATTGGGGAGTTAGGTGGACTGGCCTCCATTTGTGCTACAAGTGAAGAAATGAAATATTTCTTTCCTGTTTCAGTCTTTAATTTGATATAAAAATCTCATTTATTTTACGATGGCAACGTATAGGGTTGCTGAGTAGTCTTCTCGTTAGTTAACATCCCGTCTTTATTTTCGTAATATAATAGCAAGCTTTCCTGAGAGAAGATACACGAGCTTGAAGTTTAGAGGGTGGGTTGCCTGTTTGTTTGTTTCTTTTACATGGACTTCATGCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAATCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTCCCCAAAATTTCATCATCTTTGACCACACGAATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAGCTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATCGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGCCTCGGGAGCTTGGAGAACTAA

mRNA sequence

ATGTACATTGGTGTAACGGGAAAGAGATTCAGAGCTGTCAAGGAAGTTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAATCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTCCCCAAAATTTCATCATCTTTGACCACACGAATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAGCTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATCGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGCCTCGGGAGCTTGGAGAACTAA

Coding sequence (CDS)

ATGTACATTGGTGTAACGGGAAAGAGATTCAGAGCTGTCAAGGAAGTTGGGAAAGTTAACATGAGTGTTGGAATCATTGCCTACTACCAAGTGATGCAAGTTTGTCAGAGTGACCTCAACTGCTACCTCAAAGAGGCAATGCTTCCAACAGCAAATCAAGGGGATGGTGATCATATGCAGATTCCTCTGTCATCTGCCTTTCCTTCTGTTTTACCTCCTGGGAGAAAGAACTTGGGACCTTTCAATGCTGTTGAGTTTCAACCTTCTGAAATTTGTCCCCAAAATTTCATCATCTTTGACCACACGAATCGAAGCCAGATCATGTTCCATCCTGCAATTTGTAACAAACTTGGTGGTCCTACTGCGAATTATGAGGATAGAGAAATACCATCTCCTTTGATGGAGGATGAGGATGACATTGATGCATTATTGAGCTTAGAAGACGAAGATCACGAAGACGTTGATGGATCTGAAGATGATGAGATTAGCTCTGCAAGGTCTCAATTGAATTATGGAAATAGATCCCCTGATTCTTCATCCTCCTCTTATAGTTCCAAACCCAGGAAGAATCAGTCAGTTAATCCTGTCCACACGGCATCGAGCAGTGGAAGCAGCTGTGATGGTGACATGAAACAGTTGAAATTGAAGAAAATGGTGAAAAAACTGAGAGAGATTCTCCCTGGTGGTTACCAAATGACAACTGCCATGGTTCTGGACGAAGCTGTTAAATACCTGAAATCTCTCAAAGACGAAGTGCAGGAGCTCGGCCTCGGGAGCTTGGAGAACTAA

Protein sequence

MYIGVTGKRFRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHTNRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDEDHEDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN

Homology

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BLAST of Carg23073 vs. NCBI nr
Match: KAG7026477.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 514.6 bits (1324), Expect = 5.0e-142
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0


Query: 1   MYIGVTGKRFRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKEAMLPTANQGDGDHMQ 60
           MYIGVTGKRFRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKEAMLPTANQGDGDHMQ
Sbjct: 1   MYIGVTGKRFRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKEAMLPTANQGDGDHMQ 60

Query: 61  IPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHTNRSQIMFHPAICNKLGGP 120
           IPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHTNRSQIMFHPAICNKLGGP
Sbjct: 61  IPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHTNRSQIMFHPAICNKLGGP 120

Query: 121 TANYEDREIPSPLMEDEDDIDALLSLEDEDHEDVDGSEDDEISSARSQLNYGNRSPDSSS 180
           TANYEDREIPSPLMEDEDDIDALLSLEDEDHEDVDGSEDDEISSARSQLNYGNRSPDSSS
Sbjct: 121 TANYEDREIPSPLMEDEDDIDALLSLEDEDHEDVDGSEDDEISSARSQLNYGNRSPDSSS 180

Query: 181 SSYSSKPRKNQSVNPVHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDE 240
           SSYSSKPRKNQSVNPVHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDE
Sbjct: 181 SSYSSKPRKNQSVNPVHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDE 240

Query: 241 AVKYLKSLKDEVQELGLGSLEN 263
           AVKYLKSLKDEVQELGLGSLEN
Sbjct: 241 AVKYLKSLKDEVQELGLGSLEN 262

[Close]

BLAST of Carg23073 vs. NCBI nr
Match: KAG6594488.1 (Transcription factor basic helix-loop-helix 144, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 448.0 bits (1151), Expect = 5.7e-122
Identity = 228/231 (98.70%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 91
           M   QSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 92  CPQNFIIFDHTNRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDEDH 151
           CPQNFIIFDHTNRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDEDH
Sbjct: 61  CPQNFIIFDHTNRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDEDH 120

Query: 152 EDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDMK 211
           EDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDMK
Sbjct: 121 EDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDMK 180

Query: 212 QLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
           QLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 QLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 231

[Close]

BLAST of Carg23073 vs. NCBI nr
Match: XP_022926347.1 (transcription factor bHLH144-like [Cucurbita moschata] >XP_022926348.1 transcription factor bHLH144-like [Cucurbita moschata])

HSP 1 Score: 434.9 bits (1117), Expect = 5.0e-118
Identity = 224/232 (96.55%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 91
           M   QSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 92  CPQNFIIFDHT-NRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 151
           C QNFIIFDHT +RSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED
Sbjct: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120

Query: 152 HEDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 211
           HEDVDGSEDDEI+SARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTA SSGSSCDGDM
Sbjct: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180

Query: 212 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 232

[Close]

BLAST of Carg23073 vs. NCBI nr
Match: XP_023003284.1 (transcription factor bHLH144-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 429.9 bits (1104), Expect = 1.6e-116
Identity = 222/232 (95.69%), Postives = 224/232 (96.55%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 91
           M   QSDLNCYLKEAMLPTANQGDGDHMQIPLSSAF SVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFSSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 92  CPQNFIIFDHT-NRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 151
           CPQNFIIFDHT +RSQIMFHPAICNKLGGPTANYEDREIPSP MED DDIDALLSLEDED
Sbjct: 61  CPQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPSMEDVDDIDALLSLEDED 120

Query: 152 HEDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 211
           H+DVDGSEDDEISSARS LNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM
Sbjct: 121 HKDVDGSEDDEISSARSHLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 180

Query: 212 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 232

[Close]

BLAST of Carg23073 vs. NCBI nr
Match: KAG7034698.1 (Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 2.3e-115
Identity = 227/280 (81.07%), Postives = 241/280 (86.07%), Query Frame = 0


Query: 1   MYIGVTGKRFRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKEAMLPTANQGDGDHMQ 60
           MYIG+TGKR RAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLK AMLPTANQG  +HMQ
Sbjct: 1   MYIGITGKRNRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKNAMLPTANQGGDNHMQ 60

Query: 61  IPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHT-NRSQIMFHPAICNKLGG 120
           IPLSSA+ SVLPPGR NLGPFN VEFQPSE+CPQNFIIFDHT NRSQIMFHPAI NKL G
Sbjct: 61  IPLSSAYASVLPPGRNNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120

Query: 121 PTANY----------------EDREIPSPLMEDEDDIDALLSLEDEDHEDVDGSEDDEIS 180
           PTAN                 +DREI SPLMED DDIDALLSLEDEDHED+DGSED+EIS
Sbjct: 121 PTANMCSKYIQKNFYVNDEHNDDREISSPLMEDLDDIDALLSLEDEDHEDIDGSEDEEIS 180

Query: 181 SARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSG-SSCDGDMKQLKLKKMVKKL 240
           +ARS LNYGN+SPDSSSSSYSSKPRKN+S NPVH  SSSG SS D DMKQLK+KKMV+KL
Sbjct: 181 TARSHLNYGNQSPDSSSSSYSSKPRKNRSFNPVHKLSSSGRSSRDSDMKQLKVKKMVRKL 240

Query: 241 REILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
           REILPGGYQMTT  VLDEAVKYLKSLKDEVQ+LG+G LEN
Sbjct: 241 REILPGGYQMTTVTVLDEAVKYLKSLKDEVQKLGVGGLEN 280

[Close]

BLAST of Carg23073 vs. ExPASy Swiss-Prot
Match: Q9ASX9 (Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 95/234 (40.60%), Postives = 134/234 (57.26%), Query Frame = 0


Query: 58  HMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHT-NRSQIMFHPAICNK 117
           H      S++ ++ PP  K   P++ VE QPS +CP+NF+IFD T +RSQ+M+HP + +K
Sbjct: 19  HNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHK 78

Query: 118 L------------------GGPTANY--EDREIPSPLMEDEDDIDALLSLEDEDHE---- 177
           L                  GG   NY   ++E+ S   ED ++IDALLS  DED+E    
Sbjct: 79  LMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLS-ADEDYEENDD 138

Query: 178 ---DVDGSEDDEISSAR-SQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDG 237
              + DG + +E+S+AR S  +YGN + +S  SSY      N +      + S+ SS + 
Sbjct: 139 NEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNND 198

Query: 238 DMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
              + K+KKM+  LR I+PGG QM TA VLDEAV+YLKSLK E Q+LG+G   N
Sbjct: 199 GKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of Carg23073 vs. ExPASy TrEMBL
Match: A0A6J1EHT0 (transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433525 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 2.4e-118
Identity = 224/232 (96.55%), Postives = 226/232 (97.41%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 91
           M   QSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 92  CPQNFIIFDHT-NRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 151
           C QNFIIFDHT +RSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED
Sbjct: 61  CSQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 120

Query: 152 HEDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 211
           HEDVDGSEDDEI+SARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTA SSGSSCDGDM
Sbjct: 121 HEDVDGSEDDEINSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTALSSGSSCDGDM 180

Query: 212 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 232

[Close]

BLAST of Carg23073 vs. ExPASy TrEMBL
Match: A0A6J1KSW3 (transcription factor bHLH144-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496938 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 7.8e-117
Identity = 222/232 (95.69%), Postives = 224/232 (96.55%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 91
           M   QSDLNCYLKEAMLPTANQGDGDHMQIPLSSAF SVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFSSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 92  CPQNFIIFDHT-NRSQIMFHPAICNKLGGPTANYEDREIPSPLMEDEDDIDALLSLEDED 151
           CPQNFIIFDHT +RSQIMFHPAICNKLGGPTANYEDREIPSP MED DDIDALLSLEDED
Sbjct: 61  CPQNFIIFDHTDDRSQIMFHPAICNKLGGPTANYEDREIPSPSMEDVDDIDALLSLEDED 120

Query: 152 HEDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 211
           H+DVDGSEDDEISSARS LNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM
Sbjct: 121 HKDVDGSEDDEISSARSHLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDGDM 180

Query: 212 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
           KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN
Sbjct: 181 KQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 232

[Close]

BLAST of Carg23073 vs. ExPASy TrEMBL
Match: A0A5A7UBJ4 (Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008860 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.3e-115
Identity = 225/280 (80.36%), Postives = 241/280 (86.07%), Query Frame = 0


Query: 1   MYIGVTGKRFRAVKEVGKVNMSVGIIAYYQVMQVCQSDLNCYLKEAMLPTANQGDGDHMQ 60
           MYIG+TGKR RAV+E+GKVNMSVGIIAYYQVMQVCQSDLN YLK+A  PTA QGD +HMQ
Sbjct: 1   MYIGITGKRSRAVEEIGKVNMSVGIIAYYQVMQVCQSDLNFYLKKATHPTATQGDDNHMQ 60

Query: 61  IPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHT-NRSQIMFHPAICNKLGG 120
           IPLSSAFPSVLPPGRKNLGPFN VEFQPSE+CPQNFIIFDHT NRSQIMFHPAI NKL G
Sbjct: 61  IPLSSAFPSVLPPGRKNLGPFNTVEFQPSEVCPQNFIIFDHTDNRSQIMFHPAIANKLSG 120

Query: 121 PTAN----------------YEDREIPSPLMEDEDDIDALLSLEDEDHEDVDGSEDDEIS 180
           PTAN                YEDREI SPLMED DDIDALLSLE+E+HE +DGSEDDE+S
Sbjct: 121 PTANMCSKYIQKNFCVNDNHYEDREISSPLMEDLDDIDALLSLENENHEGLDGSEDDEVS 180

Query: 181 SARSQLNYGNRSPDSSSSS-YSSKPRKNQSVNPVHTASSSGSSCDGDMKQLKLKKMVKKL 240
           +ARS LNYGN+SPDSSSSS YSSKPRKN S NPVH +SSSGSSC  DMKQLKLKKMV+KL
Sbjct: 181 TARSHLNYGNQSPDSSSSSTYSSKPRKNHSFNPVHKSSSSGSSCSSDMKQLKLKKMVRKL 240

Query: 241 REILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
           REILPGGYQMTT  VLDEAVKYLKSLKDEVQ+LG+G LEN
Sbjct: 241 REILPGGYQMTTVAVLDEAVKYLKSLKDEVQKLGVGGLEN 280

[Close]

BLAST of Carg23073 vs. ExPASy TrEMBL
Match: A0A6J1KM08 (transcription factor bHLH144-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496938 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 8.1e-114
Identity = 222/247 (89.88%), Postives = 224/247 (90.69%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 91
           M   QSDLNCYLKEAMLPTANQGDGDHMQIPLSSAF SVLPPGRKNLGPFNAVEFQPSEI
Sbjct: 1   MDFMQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFSSVLPPGRKNLGPFNAVEFQPSEI 60

Query: 92  CPQNFIIFDHT-NRSQIMFHPAICNKLGGPTA---------------NYEDREIPSPLME 151
           CPQNFIIFDHT +RSQIMFHPAICNKLGGPTA               NYEDREIPSP ME
Sbjct: 61  CPQNFIIFDHTDDRSQIMFHPAICNKLGGPTANMSSKYIQKNSCIDENYEDREIPSPSME 120

Query: 152 DEDDIDALLSLEDEDHEDVDGSEDDEISSARSQLNYGNRSPDSSSSSYSSKPRKNQSVNP 211
           D DDIDALLSLEDEDH+DVDGSEDDEISSARS LNYGNRSPDSSSSSYSSKPRKNQSVNP
Sbjct: 121 DVDDIDALLSLEDEDHKDVDGSEDDEISSARSHLNYGNRSPDSSSSSYSSKPRKNQSVNP 180

Query: 212 VHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL 263
           VHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL
Sbjct: 181 VHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQEL 240

[Close]

BLAST of Carg23073 vs. ExPASy TrEMBL
Match: A0A1S3AYV1 (transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.2e-96
Identity = 195/249 (78.31%), Postives = 208/249 (83.53%), Query Frame = 0


Query: 32  MQVCQSDLNCYLKEAMLPTANQGDGDHMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEI 91
           M   QSDLN YLK+A  PTA QGD +HMQIPLSSAFPSVLPPGRKNLGPFN VEFQPSE+
Sbjct: 1   MDFMQSDLNFYLKKATHPTATQGDDNHMQIPLSSAFPSVLPPGRKNLGPFNTVEFQPSEV 60

Query: 92  CPQNFIIFDHT-NRSQIMFHPAICNKLGGPTAN----------------YEDREIPSPLM 151
           CPQNFIIFDHT NRSQIMFHPAI NKL GPTAN                YEDREI SPLM
Sbjct: 61  CPQNFIIFDHTDNRSQIMFHPAIANKLSGPTANMCSKYIQKNFCVNDNHYEDREISSPLM 120

Query: 152 EDEDDIDALLSLEDEDHEDVDGSEDDEISSARSQLNYGNRSPDSSSSS-YSSKPRKNQSV 211
           ED DDIDALLSLE+E+HE +DGSEDDE+S+ARS LNYGN+SPDSSSSS YSSKPRKN S 
Sbjct: 121 EDLDDIDALLSLENENHEGLDGSEDDEVSTARSHLNYGNQSPDSSSSSTYSSKPRKNHSF 180

Query: 212 NPVHTASSSGSSCDGDMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQ 263
           NPVH +SSSGSSC  DMKQLKLKKMV+KLREILPGGYQMTT  VLDEAVKYLKSLKDEVQ
Sbjct: 181 NPVHKSSSSGSSCSSDMKQLKLKKMVRKLREILPGGYQMTTVTVLDEAVKYLKSLKDEVQ 240

[Close]

BLAST of Carg23073 vs. TAIR 10
Match: AT1G29950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 9.0e-33
Identity = 95/234 (40.60%), Postives = 134/234 (57.26%), Query Frame = 0


Query: 58  HMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHT-NRSQIMFHPAICNK 117
           H      S++ ++ PP  K   P++ VE QPS +CP+NF+IFD T +RSQ+M+HP + +K
Sbjct: 19  HNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHK 78

Query: 118 L------------------GGPTANY--EDREIPSPLMEDEDDIDALLSLEDEDHE---- 177
           L                  GG   NY   ++E+ S   ED ++IDALLS  DED+E    
Sbjct: 79  LMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLS-ADEDYEENDD 138

Query: 178 ---DVDGSEDDEISSAR-SQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDG 237
              + DG + +E+S+AR S  +YGN + +S  SSY      N +      + S+ SS + 
Sbjct: 139 NEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNND 198

Query: 238 DMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
              + K+KKM+  LR I+PGG QM TA VLDEAV+YLKSLK E Q+LG+G   N
Sbjct: 199 GKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

[Close]

BLAST of Carg23073 vs. TAIR 10
Match: AT1G29950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 9.0e-33
Identity = 95/234 (40.60%), Postives = 134/234 (57.26%), Query Frame = 0


Query: 58  HMQIPLSSAFPSVLPPGRKNLGPFNAVEFQPSEICPQNFIIFDHT-NRSQIMFHPAICNK 117
           H      S++ ++ PP  K   P++ VE QPS +CP+NF+IFD T +RSQ+M+HP + +K
Sbjct: 19  HNPYASGSSYDALFPPCAKL--PYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHK 78

Query: 118 L------------------GGPTANY--EDREIPSPLMEDEDDIDALLSLEDEDHE---- 177
           L                  GG   NY   ++E+ S   ED ++IDALLS  DED+E    
Sbjct: 79  LMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLS-ADEDYEENDD 138

Query: 178 ---DVDGSEDDEISSAR-SQLNYGNRSPDSSSSSYSSKPRKNQSVNPVHTASSSGSSCDG 237
              + DG + +E+S+AR S  +YGN + +S  SSY      N +      + S+ SS + 
Sbjct: 139 NEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNND 198

Query: 238 DMKQLKLKKMVKKLREILPGGYQMTTAMVLDEAVKYLKSLKDEVQELGLGSLEN 263
              + K+KKM+  LR I+PGG QM TA VLDEAV+YLKSLK E Q+LG+G   N
Sbjct: 199 GKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSN 249

The following BLAST results are available for this feature:

BLAST of Carg23073 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7026477.1	5.0e-142	100.00	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6594488.1	5.7e-122	98.70	Transcription factor basic helix-loop-helix 144, partial [Cucurbita argyrosperma...	[more]
XP_022926347.1	5.0e-118	96.55	transcription factor bHLH144-like [Cucurbita moschata] >XP_022926348.1 transcrip...	[more]
XP_023003284.1	1.6e-116	95.69	transcription factor bHLH144-like isoform X2 [Cucurbita maxima]	[more]
KAG7034698.1	2.3e-115	81.07	Transcription factor bHLH [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Carg23073 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASX9	1.3e-31	40.60	Transcription factor bHLH144 OS=Arabidopsis thaliana OX=3702 GN=BHLH144 PE=1 SV=...	[more]

BLAST of Carg23073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHT0	2.4e-118	96.55	transcription factor bHLH144-like OS=Cucurbita moschata OX=3662 GN=LOC111433525 ...	[more]
A0A6J1KSW3	7.8e-117	95.69	transcription factor bHLH144-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5A7UBJ4	4.3e-115	80.36	Transcription factor bHLH144 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A6J1KM08	8.1e-114	89.88	transcription factor bHLH144-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A1S3AYV1	1.2e-96	78.31	transcription factor bHLH144 OS=Cucumis melo OX=3656 GN=LOC103484384 PE=4 SV=1	[more]

BLAST of Carg23073 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29950.1	9.0e-33	40.60	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G29950.2	9.0e-33	40.60	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..208
None	No IPR available	PANTHER	PTHR36066:SF11	TRANSCRIPTION FACTOR BHLH144	coord: 37..260
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 223..255 e-value: 1.30557E-8 score: 48.3316
IPR037546	Transcription factor SAC51-like	PANTHER	PTHR36066	TRANSCRIPTION FACTOR BHLH145	coord: 37..260
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 199..248 score: 8.587612
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 214..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23073-RA	Carg23073-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity