Carg23014 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg23014
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	serine-rich protein-related
Location	Carg_Chr05: 11083333 .. 11083881 (-)
RNA-Seq Expression	Carg23014
Synteny	Carg23014

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCAACGTCTCGAAGATCAAATGCAGCAGTTCTCCGCTCGCTCTCACCGTCGACCTCCAGTTTCTCCTCCAGATCGGCCGCTTCCTTCTTCTGCAGAACGACTTCCCCGTCGCGTGTGAAGCTTCACGGTTCGCCTTCGGTTTCCGTGTCGTCCATGCGCTTTTCTCTAGACCGTGCGATTTCTCCGAACAGATCCGTGTCTGTTTCTTCTTGCTGCGGTGGGGAGAATCGAGTGGTGCAGAGGCAGAGCAGTTTGAAGAGGACGTGTATGTGTTCTCCTACAACTCACCCTGGCTCGTTTCGGTGTAGTCTCCATAAAGGAACTGTTTCGCAACCTCACGCAGCGTACTCTCCAAGTAGGTTGAATGCTCGTAGATCGGCAATGACGAATTCTCTGGTTAGAATTGGAGGCGTTGAAGGCGACCTTGTGAAGCGAGCTTTAGCGGCATTGATTCGGCCTTCATCTCATCAGCAACGACGCCGAGTTGATTTCAAGGCAAAGAGTAGCCGGCTGTCGATTATGTCCAAGGCCGAAGAAACATAA

mRNA sequence

ATGGCGGCAACGTCTCGAAGATCAAATGCAGCAGTTCTCCGCTCGCTCTCACCGTCGACCTCCAGTTTCTCCTCCAGATCGGCCGCTTCCTTCTTCTGCAGAACGACTTCCCCGTCGCGTGTGAAGCTTCACGGTTCGCCTTCGGTTTCCGTGTCGTCCATGCGCTTTTCTCTAGACCGTGCGATTTCTCCGAACAGATCCGTGTCTGTTTCTTCTTGCTGCGGTGGGGAGAATCGAGTGGTGCAGAGGCAGAGCAGTTTGAAGAGGACGTGTATGTGTTCTCCTACAACTCACCCTGGCTCGTTTCGGTGTAGTCTCCATAAAGGAACTGTTTCGCAACCTCACGCAGCGTACTCTCCAAGTAGGTTGAATGCTCGTAGATCGGCAATGACGAATTCTCTGGTTAGAATTGGAGGCGTTGAAGGCGACCTTGTGAAGCGAGCTTTAGCGGCATTGATTCGGCCTTCATCTCATCAGCAACGACGCCGAGTTGATTTCAAGGCAAAGAGTAGCCGGCTGTCGATTATGTCCAAGGCCGAAGAAACATAA

Coding sequence (CDS)

ATGGCGGCAACGTCTCGAAGATCAAATGCAGCAGTTCTCCGCTCGCTCTCACCGTCGACCTCCAGTTTCTCCTCCAGATCGGCCGCTTCCTTCTTCTGCAGAACGACTTCCCCGTCGCGTGTGAAGCTTCACGGTTCGCCTTCGGTTTCCGTGTCGTCCATGCGCTTTTCTCTAGACCGTGCGATTTCTCCGAACAGATCCGTGTCTGTTTCTTCTTGCTGCGGTGGGGAGAATCGAGTGGTGCAGAGGCAGAGCAGTTTGAAGAGGACGTGTATGTGTTCTCCTACAACTCACCCTGGCTCGTTTCGGTGTAGTCTCCATAAAGGAACTGTTTCGCAACCTCACGCAGCGTACTCTCCAAGTAGGTTGAATGCTCGTAGATCGGCAATGACGAATTCTCTGGTTAGAATTGGAGGCGTTGAAGGCGACCTTGTGAAGCGAGCTTTAGCGGCATTGATTCGGCCTTCATCTCATCAGCAACGACGCCGAGTTGATTTCAAGGCAAAGAGTAGCCGGCTGTCGATTATGTCCAAGGCCGAAGAAACATAA

Protein sequence

MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDRAISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAEET

Homology

[Close]

BLAST of Carg23014 vs. NCBI nr
Match: KAG7030338.1 (hypothetical protein SDJN02_08685, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337.0 bits (863), Expect = 9.9e-89
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60
           MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR
Sbjct: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60

Query: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120
           AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP
Sbjct: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120

Query: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 180
           SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE
Sbjct: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 180

Query: 181 ET 183
           ET
Sbjct: 181 ET 182

[Close]

BLAST of Carg23014 vs. NCBI nr
Match: XP_022946685.1 (uncharacterized protein LOC111450677 [Cucurbita moschata])

HSP 1 Score: 325.9 bits (834), Expect = 2.3e-85
Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60
           MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR
Sbjct: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60

Query: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120
           AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP
Sbjct: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120

Query: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 180
           SRLNARRSAMTNSLVRIG   GDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE
Sbjct: 121 SRLNARRSAMTNSLVRIG---GDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 179

Query: 181 ET 183
           ET
Sbjct: 181 ET 179

[Close]

BLAST of Carg23014 vs. NCBI nr
Match: XP_022999420.1 (uncharacterized protein LOC111493798 [Cucurbita maxima])

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85
Identity = 176/182 (96.70%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60
           MAAT+RRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSR KLHGSPSVSVSSMRFSLDR
Sbjct: 1   MAATTRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRAKLHGSPSVSVSSMRFSLDR 60

Query: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120
           AISPNRSVSVSS CGG+NRVVQRQSSLK+TCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP
Sbjct: 61  AISPNRSVSVSSRCGGKNRVVQRQSSLKKTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120

Query: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 180
           SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFK KSSRLSIMSKAE
Sbjct: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKVKSSRLSIMSKAE 180

Query: 181 ET 183
           ET
Sbjct: 181 ET 182

[Close]

BLAST of Carg23014 vs. NCBI nr
Match: KAG6599350.1 (hypothetical protein SDJN03_09128, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.1 bits (832), Expect = 3.9e-85
Identity = 177/182 (97.25%), Postives = 180/182 (98.90%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60
           MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHG PSVSVSSMRFSLDR
Sbjct: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGLPSVSVSSMRFSLDR 60

Query: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120
           AISPNRSVSVSS CGG++RVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP
Sbjct: 61  AISPNRSVSVSSRCGGKDRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120

Query: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 180
           SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMS+AE
Sbjct: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSEAE 180

Query: 181 ET 183
           ET
Sbjct: 181 ET 182

[Close]

BLAST of Carg23014 vs. NCBI nr
Match: XP_023545399.1 (uncharacterized protein LOC111804834, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.4 bits (799), Expect = 2.6e-81
Identity = 168/173 (97.11%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 10  AAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDRAISPNRSVS 69
           +AVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDRAISPNRSVS
Sbjct: 29  SAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDRAISPNRSVS 88

Query: 70  VSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSPSRLNARRSA 129
           VSS CGG++RVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSPSRLNARRSA
Sbjct: 89  VSSRCGGKDRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSPSRLNARRSA 148

Query: 130 MTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAEET 183
           MTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFK KSSRLSIMSKAEET
Sbjct: 149 MTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKVKSSRLSIMSKAEET 201

[Close]

BLAST of Carg23014 vs. ExPASy TrEMBL
Match: A0A6J1G4L7 (uncharacterized protein LOC111450677 OS=Cucurbita moschata OX=3662 GN=LOC111450677 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.1e-85
Identity = 179/182 (98.35%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60
           MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR
Sbjct: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60

Query: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120
           AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP
Sbjct: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120

Query: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 180
           SRLNARRSAMTNSLVRIG   GDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE
Sbjct: 121 SRLNARRSAMTNSLVRIG---GDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 179

Query: 181 ET 183
           ET
Sbjct: 181 ET 179

[Close]

BLAST of Carg23014 vs. ExPASy TrEMBL
Match: A0A6J1KFC2 (uncharacterized protein LOC111493798 OS=Cucurbita maxima OX=3661 GN=LOC111493798 PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.4e-85
Identity = 176/182 (96.70%), Postives = 179/182 (98.35%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRVKLHGSPSVSVSSMRFSLDR 60
           MAAT+RRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSR KLHGSPSVSVSSMRFSLDR
Sbjct: 1   MAATTRRSNAAVLRSLSPSTSSFSSRSAASFFCRTTSPSRAKLHGSPSVSVSSMRFSLDR 60

Query: 61  AISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120
           AISPNRSVSVSS CGG+NRVVQRQSSLK+TCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP
Sbjct: 61  AISPNRSVSVSSRCGGKNRVVQRQSSLKKTCMCSPTTHPGSFRCSLHKGTVSQPHAAYSP 120

Query: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAE 180
           SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFK KSSRLSIMSKAE
Sbjct: 121 SRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKVKSSRLSIMSKAE 180

Query: 181 ET 183
           ET
Sbjct: 181 ET 182

[Close]

BLAST of Carg23014 vs. ExPASy TrEMBL
Match: A0A0A0LL69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 5.3e-72
Identity = 161/200 (80.50%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSP-----------------STSSFSSRSAASFFCRTTSPSRVKL 60
           MAATSRRS+A+VLRSLSP                 STS+FSSRSA SFFCR+TSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSPSVSVSSMRFSLDRAISPNRSVSVSSC-CGGENRVVQRQSSLKRTCMCSPTTHPGSF 120
           HGSPSVSV S+RFSLDRA SPNRSVSVSS   GG NRVVQRQSS KRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSTKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGTVSQPHAAYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKG +SQP A YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVDFKAKSSRLSIMSKAEET 183
           RVDF+ K SRLSIMSKA+ET
Sbjct: 181 RVDFRPKRSRLSIMSKADET 200

[Close]

BLAST of Carg23014 vs. ExPASy TrEMBL
Match: A0A5A7V7K3 (Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00990 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.9e-72
Identity = 161/200 (80.50%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSP-----------------STSSFSSRSAASFFCRTTSPSRVKL 60
           MAATSRRS+A+VLRSLSP                 STS+FSSRSA SFFCR+TSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSPSVSVSSMRFSLDRAISPNRSVSVSSC-CGGENRVVQRQSSLKRTCMCSPTTHPGSF 120
           HGSPSVSV S+RFSLDRA SPNRSVSVSS   GG NRVVQRQSS KRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSSRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGTVSQPHAAYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKG +SQP A YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVDFKAKSSRLSIMSKAEET 183
           RVDF+ K SRLSIMSKA+ET
Sbjct: 181 RVDFRPKRSRLSIMSKADET 200

[Close]

BLAST of Carg23014 vs. ExPASy TrEMBL
Match: A0A1S4E2K6 (uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71
Identity = 161/200 (80.50%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSP-----------------STSSFSSRSAASFFCRTTSPSRVKL 60
           MAATSRRS+A+VLRSLSP                 STS+FSSRSA SFFCR+TSPSRV L
Sbjct: 1   MAATSRRSSASVLRSLSPSGRFYGHRTSSSSAFASSTSTFSSRSATSFFCRSTSPSRVNL 60

Query: 61  HGSPSVSVSSMRFSLDRAISPNRSVSVSS-CCGGENRVVQRQSSLKRTCMCSPTTHPGSF 120
           HGSPSVSV S+RFSLDRA SPNRSVSVSS   GG NRVVQRQSS KRTCMCSPTTHPGSF
Sbjct: 61  HGSPSVSVPSVRFSLDRATSPNRSVSVSSPRSGGTNRVVQRQSSSKRTCMCSPTTHPGSF 120

Query: 121 RCSLHKGTVSQPHAAYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180
           RCSLHKG +SQP A YSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR
Sbjct: 121 RCSLHKGIISQPPALYSPSRLNARRSAMTNSLVRIGGVEGDLVKRALAALIRPSSHQQRR 180

Query: 181 RVDFKAKSSRLSIMSKAEET 183
           RVDF+ K SRLSIMSKA+ET
Sbjct: 181 RVDFRPKRSRLSIMSKADET 200

[Close]

BLAST of Carg23014 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-34
Identity = 93/171 (54.39%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 17  SPSTSSFSSRSAASFF-CRTTSPSRVKLHGSPSVSVSSMRFSLD-RAISPNRSVSVSSCC 76
           SPST+ FSS +  +    R+ SP+RV L  S  ++  S R+S+D R+ISPNRS++VSS  
Sbjct: 54  SPSTAFFSSHNQNNHHQHRSASPTRVNLFTSAPMT-QSFRYSIDNRSISPNRSIAVSSNK 113

Query: 77  GGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPH----AAYSPSRLNARRSAM 136
              +  +      +R CMCSPTTHPGSFRCSLHK  V+ PH    A+Y+ + LN RRSAM
Sbjct: 114 PSNHHKI---PDSRRRCMCSPTTHPGSFRCSLHK-NVANPHGQGTASYTTNGLNMRRSAM 173

Query: 137 TNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAEE 182
           TNSLVRIGGVEG+ V+RAL  LIRPSSHQ +RR  ++ + SRL+ MSKAE+
Sbjct: 174 TNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of Carg23014 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-34
Identity = 93/171 (54.39%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 17  SPSTSSFSSRSAASFF-CRTTSPSRVKLHGSPSVSVSSMRFSLD-RAISPNRSVSVSSCC 76
           SPST+ FSS +  +    R+ SP+RV L  S  ++  S R+S+D R+ISPNRS++VSS  
Sbjct: 54  SPSTAFFSSHNQNNHHQHRSASPTRVNLFTSAPMT-QSFRYSIDNRSISPNRSIAVSSNK 113

Query: 77  GGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPH----AAYSPSRLNARRSAM 136
              +  +      +R CMCSPTTHPGSFRCSLHK  V+ PH    A+Y+ + LN RRSAM
Sbjct: 114 PSNHHKI---PDSRRRCMCSPTTHPGSFRCSLHK-NVANPHGQGTASYTTNGLNMRRSAM 173

Query: 137 TNSLVRIGGVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAEE 182
           TNSLVRIGGVEG+ V+RAL  LIRPSSHQ +RR  ++ + SRL+ MSKAE+
Sbjct: 174 TNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAED 219

[Close]

BLAST of Carg23014 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 142.5 bits (358), Expect = 3.3e-34
Identity = 108/223 (48.43%), Postives = 134/223 (60.09%), Query Frame = 0


Query: 1   MAATSRR--SNAAVLRSLSPS-----------------------TSSFSSRSAASF---- 60
           M  TS R  SN  VLRS SPS                       +SSFSS S+A F    
Sbjct: 1   MVTTSSRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHR 60

Query: 61  -------FCRTTSPSRVKLHGSPSVSVSSMRFSLD-RAISP-NRSVSVSSCCGGENRVVQ 120
                    R+ SP+RV L+ +  +S  S R+SLD R+ISP N+S+SVS     +N+   
Sbjct: 61  HHESNHSHHRSASPTRVNLYTAQPMS-QSFRYSLDSRSISPTNKSISVS-----KNQPPS 120

Query: 121 RQSSLKRTCMCSPTTHPGSFRCSLHKGTVSQPH----AAYSPSRLNARRSAMTNSLVRIG 180
               + R CMCSPTTHPGSFRCSLHK  V+ PH    A+Y+ + LN RRSAMTNSLVRIG
Sbjct: 121 HNHKISRRCMCSPTTHPGSFRCSLHK-NVANPHGQGTASYTTNGLNMRRSAMTNSLVRIG 180

Query: 181 GVEGDLVKRALAALIRPSSHQQRRRVDFKAKSSRLSIMSKAEE 182
           GVEG+ V+RAL  LIRPSSH  +RR  ++ + SRLSIM+KA+E
Sbjct: 181 GVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of Carg23014 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 62.8 bits (151), Expect = 3.3e-10
Identity = 66/194 (34.02%), Postives = 91/194 (46.91%), Query Frame = 0


Query: 1   MAATSRRSNAAVLRSLSPSTSSFSS-----RSAASFFCRTTSPSRVKLHGSPSVSVSSMR 60
           MAAT  RS+ +VLR LS S    ++     R  +   C      R+K +   S+   S+ 
Sbjct: 1   MAATG-RSSRSVLRPLSSSQRLHNNHHHHHRQRSPSPCNKNLNLRLKFYSPGSIPKPSV- 60

Query: 61  FSLDRAISPNRSVSVSSCCGGENRVVQRQSSLKRTCMCSPTTHPGSFRCSLHK------- 120
                       V+VSS               KR C+CSPTTHPGSFRCS H+       
Sbjct: 61  ------------VTVSS-----------NHQTKRKCLCSPTTHPGSFRCSFHRRLEHEKS 120

Query: 121 -----GTVSQPHAAYSPSR----LNARRSAMTNSLVRIGGVEGDLVKRALAA-LIRPSSH 173
                 TV + +   +  R    LN R+ A+ NSL +IG VE +  +R+LAA L +PSS 
Sbjct: 121 KTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLAKPSSL 169

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BLAST of Carg23014 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-05
Identity = 19/32 (59.38%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 78  NRVVQRQSSLKRT-CMCSPTTHPGSFRCSLHK 109
           +R + RQ+S+ +T C+CSPTTHPGSFRC +H+
Sbjct: 30  SRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHR 61

The following BLAST results are available for this feature:

BLAST of Carg23014 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030338.1	9.9e-89	100.00	hypothetical protein SDJN02_08685, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022946685.1	2.3e-85	98.35	uncharacterized protein LOC111450677 [Cucurbita moschata]	[more]
XP_022999420.1	3.0e-85	96.70	uncharacterized protein LOC111493798 [Cucurbita maxima]	[more]
KAG6599350.1	3.9e-85	97.25	hypothetical protein SDJN03_09128, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023545399.1	2.6e-81	97.11	uncharacterized protein LOC111804834, partial [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg23014 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg23014 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4L7	1.1e-85	98.35	uncharacterized protein LOC111450677 OS=Cucurbita moschata OX=3662 GN=LOC1114506...	[more]
A0A6J1KFC2	1.4e-85	96.70	uncharacterized protein LOC111493798 OS=Cucurbita maxima OX=3661 GN=LOC111493798...	[more]
A0A0A0LL69	5.3e-72	80.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009440 PE=4 SV=1	[more]
A0A5A7V7K3	6.9e-72	80.50	Putative serine-rich protein C215.13-like protein OS=Cucumis melo var. makuwa OX...	[more]
A0A1S4E2K6	1.2e-71	80.50	uncharacterized protein LOC103496492 OS=Cucumis melo OX=3656 GN=LOC103496492 PE=...	[more]

BLAST of Carg23014 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25280.1	1.9e-34	54.39	serine-rich protein-related	[more]
AT5G25280.2	1.9e-34	54.39	serine-rich protein-related	[more]
AT5G11090.1	3.3e-34	48.43	serine-rich protein-related	[more]
AT5G20370.1	3.3e-10	34.02	serine-rich protein-related	[more]
AT1G67910.1	3.2e-05	59.38	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33132:SF80	BNACNNG20100D PROTEIN	coord: 15..180
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 15..180

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23014-RA	Carg23014-RA	mRNA