Carg22965 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAGCCTTTCGCTAGCAAATATTGTCCTCTTTGGACTTTCCCTCATGGTTTTTAAAACGCGTCTACTAGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGCTCTCCTCCCCGACTGATGTGTGATCTTACACTAATTATTGAAGAAGAAAGAACAGTAGAATTCTACTTTGTGGCACTTGCTTTCACTTGAAGGAAAAGGGCTCCTCGGGGCTCACCGAGATAGACCGAAAACGTCGGTCACGAGTTGTATGAATTGGGTTATACTACTATGTAGCTGTCTGTGGTGTCTTTCTGTCATGATTTCATACTTCGATAAAGAAATGAACTCAATATTATAACTTAATGAAGTAAAGTGTGTGCTTATGTTTCCAGAATTTACAGGCTGAGACTAAGAGCCAATTGATTCGTGGTTTCACTATCAACCATGAAAGGAGGATCAGAGAATGGATGGCATTACTTTAAGTCTCTTCATTTTAGAGGTAAACCAGCCAACAATTTGTGCTTGCTTCAGACCTCTGCCAGTACTCCGGGCGAAACTCCGGTCTATCTCAACGTGTATGACTTAACACCTGCAAATGGCTACATCTACTGGGCTGGTCTTGGCATCTTTCACTCCGGCATAGAAGGTTGGTTAGTTTACTTCTGTTTCGTTCGTATATCTAAATCGTGAACGATGATTTTGTTCTCACTTTTTTGGACAAAGGATCTGTGTTGATCTTGTAGATGTTCTTAAGATTATGTTATGTAAGTTGTAGCCATAAGTTATTATCTGTGTTAACAGTTTATGGGGTTGAATATGCGTTTGGAGCCCACGACTATCCTACGAGTGGTATCTTTGAGGTCGAACCTCGGACATGCCCTGGATTCAAGTTTAGGAAGTCGATTTATATCGGTACGACCTGCTTGGACCCAATCCAAGTAAGAGACTTTATGGAGTGTGAAGCTGCAAACTATCATGGCGATTCGTATCACTTGATTGTGAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAGCTAACTGGGAAACGCATACCGAAATGGATAAATCGGCTTGCGAGATTAGGTACGTGCTTCGTCGTTTCCCTTGTCCAGAATACTTACGATGTCATGCTAGATCCTATGTGATTCTAAACCAGAAACACTCTTTGCAGGTTCCAAATGCAACTGCATACTCCCGAAAGCTCTCAAGGCCACAACCGTGCAACACGACCCGGGATTTGAGGGTGAAAAGAAAAGACTAAGAAGCGGTTTCGGTTGCTTATCCTCAATCTCTATGAATCAGAAGGAAGTTTCAATATCTTCACTGTTTCTACACTCTCACTATAAAGGCTGCCTACCTCCATGGGAACTGAAACGATCCAAAAGTTGGTCGTTCAAGTAAGGAGAAGACGACTTACCCCAACCCGAGCTTGCTTACAAGGTTTGTTCTTCGAGTTCTCGAGATAATAGCCATGGGAGCTGACTGGTTTGAGGTTTGAGGTTTGATAGCCAGAGGCTTTAATTTATCTCTTTCTTTTTCTCTCTTTTGTTTCTTAGTCTCTCAGAGGCTTTGTTCTAATCATTGACTGTTTCTTTTGGTAGAGCTTAGGAATCTTTCAATGTATATTAGCTGTTCTTCTTCCTCTCTTTGCTAATCATTGTTTTAGCAGAAGCTTCGTATTATGTTACGAGAGAGAACCTGTGAGATCCCACATTGATTAGAGAGTAGAACGAGTATCGGCAAAGACGCTAGACCCTGAACGAGAGTGGATTGTGAAATACCACATAGGTTAGGGAGGAGAACGAAACGTTTGTCAAACGAACACGACTTTCTACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATTGCTTTGCTTCGGGCTCCCCCAAAAGGCTTCATACCAATGGAGAGAGTATTCTTTGTTTATAAACTCATAATCATTCCCTAAATTAGCCGGGACTTTCATCATCCAACAATAATGTTCTTTACAAGGGTGTGGAAACTTCTCTATAGTAGACGCGTTTTAAAAACCTTGAGGGAAAATTCGAAAGGAAAACTCTAAAAAGGACAATATCTGCTAACGATGAACTAATGACTCGAGAAGGTATACCAATTAGATCGGCTCGAGATATCTAAAATCATAGCTAATTCAAACTTAGGAAAAGAATCTCTTCCAGCAGAGAAGAATATCAGATAGAAATTTATTAATCATTCATTACAGCTTTATGCTGAACATGATTTCATTCCTAATCCCACCAATATTTTATGCCAAATTCGTTCACACAGAATTTTTTTAGTAAATAAATTGAAATAATTAATTCACACATTTTTCTTTTTATAAAAAATATTTGATAAAGTCAACTGTACATTAAAAATAAAGCTC CCAAGCCTTTCGCTAGCAAATATTGTCCTCTTTGGACTTTCCCTCATGGTTTTTAAAACGCGTCTACTAGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGCTCTCCTCCCCGACTGATGTGTGATCTTACACTAATTATTGAAGAAGAAAGAACAGTAGAATTCTACTTTGTGGCACTTGCTTTCACTTGAAGGAAAAGGGCTCCTCGGGGCTCACCGAGATAGACCGAAAACGTCGGTCACGAGTTGTATGAATTGGGTTATACTACTATGTAGCTGTCTGTGGTGTCTTTCTGTCATGATTTCATACTTCGATAAAGAAATGAACTCAATATTATAACTTAATGAAGTAAAGTGTGTGCTTATGTTTCCAGAATTTACAGGCTGAGACTAAGAGCCAATTGATTCGTGGTTTCACTATCAACCATGAAAGGAGGATCAGAGAATGGATGGCATTACTTTAAGTCTCTTCATTTTAGAGGTAAACCAGCCAACAATTTGTGCTTGCTTCAGACCTCTGCCAGTACTCCGGGCGAAACTCCGGTCTATCTCAACGTGTATGACTTAACACCTGCAAATGGCTACATCTACTGGGCTGGTCTTGGCATCTTTCACTCCGGCATAGAAGTTTATGGGGTTGAATATGCGTTTGGAGCCCACGACTATCCTACGAGTGGTATCTTTGAGGTCGAACCTCGGACATGCCCTGGATTCAAGTTTAGGAAGTCGATTTATATCGGTACGACCTGCTTGGACCCAATCCAAGTAAGAGACTTTATGGAGTGTGAAGCTGCAAACTATCATGGCGATTCGTATCACTTGATTGTGAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAGCTAACTGGGAAACGCATACCGAAATGGATAAATCGGCTTGCGAGATTAGGTTCCAAATGCAACTGCATACTCCCGAAAGCTCTCAAGGCCACAACCGTGCAACACGACCCGGGATTTGAGGGTGAAAAGAAAAGACTAAGAAGCGGTTTCGGTTGCTTATCCTCAATCTCTATGAATCAGAAGGAAGTTTCAATATCTTCACTGTTTCTACACTCTCACTATAAAGGCTGCCTACCTCCATGGGAACTGAAACGATCCAAAAGTTGGTCGTTCAAGTAAGGAGAAGACGACTTACCCCAACCCGAGCTTGCTTACAAGGTTTGTTCTTCGAGTTCTCGAGATAATAGCCATGGGAGCTGACTGGTTTGAGGTTTGAGGTTTGATAGCCAGAGGCTTTAATTTATCTCTTTCTTTTTCTCTCTTTTGTTTCTTAGTCTCTCAGAGGCTTTGTTCTAATCATTGACTGTTTCTTTTGGTAGAGCTTAGGAATCTTTCAATGTATATTAGCTGTTCTTCTTCCTCTCTTTGCTAATCATTGTTTTAGCAGAAGCTTCGTATTATGTTACGAGAGAGAACCTGTGAGATCCCACATTGATTAGAGAGTAGAACGAGTATCGGCAAAGACGCTAGACCCTGAACGAGAGTGGATTGTGAAATACCACATAGGTTAGGGAGGAGAACGAAACGTTTGTCAAACGAACACGACTTTCTACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATTGCTTTGCTTCGGGCTCCCCCAAAAGGCTTCATACCAATGGAGAGAGTATTCTTTGTTTATAAACTCATAATCATTCCCTAAATTAGCCGGGACTTTCATCATCCAACAATAATGTTCTTTACAAGGGTGTGGAAACTTCTCTATAGTAGACGCGTTTTAAAAACCTTGAGGGAAAATTCGAAAGGAAAACTCTAAAAAGGACAATATCTGCTAACGATGAACTAATGACTCGAGAAGGTATACCAATTAGATCGGCTCGAGATATCTAAAATCATAGCTAATTCAAACTTAGGAAAAGAATCTCTTCCAGCAGAGAAGAATATCAGATAGAAATTTATTAATCATTCATTACAGCTTTATGCTGAACATGATTTCATTCCTAATCCCACCAATATTTTATGCCAAATTCGTTCACACAGAATTTTTTTAGTAAATAAATTGAAATAATTAATTCACACATTTTTCTTTTTATAAAAAATATTTGATAAAGTCAACTGTACATTAAAAATAAAGCTC ATGAAAGGAGGATCAGAGAATGGATGGCATTACTTTAAGTCTCTTCATTTTAGAGGTAAACCAGCCAACAATTTGTGCTTGCTTCAGACCTCTGCCAGTACTCCGGGCGAAACTCCGGTCTATCTCAACGTGTATGACTTAACACCTGCAAATGGCTACATCTACTGGGCTGGTCTTGGCATCTTTCACTCCGGCATAGAAGTTTATGGGGTTGAATATGCGTTTGGAGCCCACGACTATCCTACGAGTGGTATCTTTGAGGTCGAACCTCGGACATGCCCTGGATTCAAGTTTAGGAAGTCGATTTATATCGGTACGACCTGCTTGGACCCAATCCAAGTAAGAGACTTTATGGAGTGTGAAGCTGCAAACTATCATGGCGATTCGTATCACTTGATTGTGAAGAATTGCAACCATTTCTGTGAGGATATATGCAGAAAGCTAACTGGGAAACGCATACCGAAATGGATAAATCGGCTTGCGAGATTAGGTTCCAAATGCAACTGCATACTCCCGAAAGCTCTCAAGGCCACAACCGTGCAACACGACCCGGGATTTGAGGGTGAAAAGAAAAGACTAAGAAGCGGTTTCGGTTGCTTATCCTCAATCTCTATGAATCAGAAGGAAGTTTCAATATCTTCACTGTTTCTACACTCTCACTATAAAGGCTGCCTACCTCCATGGGAACTGAAACGATCCAAAAGTTGGTCGTTCAAGTAA MKGGSENGWHYFKSLHFRGKPANNLCLLQTSASTPGETPVYLNVYDLTPANGYIYWAGLGIFHSGIEVYGVEYAFGAHDYPTSGIFEVEPRTCPGFKFRKSIYIGTTCLDPIQVRDFMECEAANYHGDSYHLIVKNCNHFCEDICRKLTGKRIPKWINRLARLGSKCNCILPKALKATTVQHDPGFEGEKKRLRSGFGCLSSISMNQKEVSISSLFLHSHYKGCLPPWELKRSKSWSFK Homology
BLAST of Carg22965 vs. NCBI nr
Match: XP_022948187.1 (deSI-like protein At4g17486 [Cucurbita moschata] >KAG6605107.1 DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035107.1 DeSI-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 521.5 bits (1342), Expect = 3.7e-144 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg22965 vs. NCBI nr
Match: XP_023533333.1 (deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo] >XP_023533334.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 516.2 bits (1328), Expect = 1.6e-142 Identity = 239/242 (98.76%), Postives = 239/242 (98.76%), Query Frame = 0
BLAST of Carg22965 vs. NCBI nr
Match: XP_023007525.1 (deSI-like protein At4g17486 [Cucurbita maxima] >XP_023007526.1 deSI-like protein At4g17486 [Cucurbita maxima]) HSP 1 Score: 506.5 bits (1303), Expect = 1.2e-139 Identity = 235/242 (97.11%), Postives = 236/242 (97.52%), Query Frame = 0
BLAST of Carg22965 vs. NCBI nr
Match: XP_022943930.1 (deSI-like protein At4g17486 [Cucurbita moschata] >XP_023513408.1 deSI-like protein At4g17486 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 479.2 bits (1232), Expect = 2.1e-131 Identity = 222/245 (90.61%), Postives = 231/245 (94.29%), Query Frame = 0
BLAST of Carg22965 vs. NCBI nr
Match: XP_022148519.1 (deSI-like protein At4g17486 [Momordica charantia] >XP_022148520.1 deSI-like protein At4g17486 [Momordica charantia] >XP_022148521.1 deSI-like protein At4g17486 [Momordica charantia]) HSP 1 Score: 471.5 bits (1212), Expect = 4.4e-129 Identity = 217/245 (88.57%), Postives = 227/245 (92.65%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.4e-56 Identity = 92/147 (62.59%), Postives = 116/147 (78.91%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29 Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy Swiss-Prot
Match: Q6DC39 (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.0e-27 Identity = 59/131 (45.04%), Postives = 80/131 (61.07%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy Swiss-Prot
Match: Q9BSY9 (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27 Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy Swiss-Prot
Match: Q9D291 (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27 Identity = 60/130 (46.15%), Postives = 79/130 (60.77%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy TrEMBL
Match: A0A6J1G8I0 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111451838 PE=3 SV=1) HSP 1 Score: 521.5 bits (1342), Expect = 1.8e-144 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy TrEMBL
Match: A0A6J1L374 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111499990 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 6.0e-140 Identity = 235/242 (97.11%), Postives = 236/242 (97.52%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy TrEMBL
Match: A0A6J1FYD4 (deSI-like protein At4g17486 OS=Cucurbita moschata OX=3662 GN=LOC111448503 PE=3 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 1.0e-131 Identity = 222/245 (90.61%), Postives = 231/245 (94.29%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy TrEMBL
Match: A0A6J1D346 (deSI-like protein At4g17486 OS=Momordica charantia OX=3673 GN=LOC111017148 PE=3 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.1e-129 Identity = 217/245 (88.57%), Postives = 227/245 (92.65%), Query Frame = 0
BLAST of Carg22965 vs. ExPASy TrEMBL
Match: A0A6J1JGZ4 (deSI-like protein At4g17486 OS=Cucurbita maxima OX=3661 GN=LOC111484288 PE=3 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 2.8e-129 Identity = 218/245 (88.98%), Postives = 228/245 (93.06%), Query Frame = 0
BLAST of Carg22965 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 341.3 bits (874), Expect = 6.4e-94 Identity = 159/243 (65.43%), Postives = 188/243 (77.37%), Query Frame = 0
BLAST of Carg22965 vs. TAIR 10
Match: AT1G47740.2 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 341.3 bits (874), Expect = 6.4e-94 Identity = 159/243 (65.43%), Postives = 188/243 (77.37%), Query Frame = 0
BLAST of Carg22965 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 232.3 bits (591), Expect = 4.2e-61 Identity = 116/205 (56.59%), Postives = 134/205 (65.37%), Query Frame = 0
BLAST of Carg22965 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 224.9 bits (572), Expect = 6.7e-59 Identity = 104/178 (58.43%), Postives = 125/178 (70.22%), Query Frame = 0
BLAST of Carg22965 vs. TAIR 10
Match: AT5G47310.1 (PPPDE putative thiol peptidase family protein ) HSP 1 Score: 223.4 bits (568), Expect = 1.9e-58 Identity = 97/167 (58.08%), Postives = 123/167 (73.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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