Carg22870 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22870
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DUF2062 domain-containing protein
Location	Carg_Chr15: 280938 .. 283981 (+)
RNA-Seq Expression	Carg22870
Synteny	Carg22870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACAGTAGGGCATACACGTCCGACCAGTTGGTTTAACCAAAAGATCGTCGATCCTCTCCTCCAAATCCTCCAGAGGTTCTTTCTCTCATTGCGCATTTGAATTGTGAAATGTTTTATTTCTCTTGGAGCAGCGAAGTTTGTTTGATAGGAATTTGACGAACTCTGTTCTTCATTTTGTACAATTTTGCTTGGGAATTTTTAATCTGAGGATCAGATATCGCATGTCATTTTACAGATTGTCTATGTTTGGAAGCGTATTTTGATTTGATTTTGAGTTCTGACCTTCTAGTATGGAATGAAAGGCATATTCCTAAAGAGAAAAATGAGAAGTGCTGGTTTCAATGATTTCAGGAATTACTTTTTCCCTCTCTTTTCATGAATTCTAGGAGTTGTTTTTGTTACTTCTTTTCTCAAAGAGACAAATGATCCAAAGCTCCTCTTAATTTTCTGAAGATTGGCCTTGAAGAAATTACTAAATCCTTTATACTCTCTATTCTTGGTTTTGCTGTTGAAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTCGGCACAACCCTGGGACTGTTTCCTATATGCGGTATATATTTCCTTTACAGTACAGAGACTACTGGACTCTGTTGCTTTCACACTTAACTGCATTATGTTTCTCAAGATGTGAAGTTCTTTAATGTGGTCAAGTTCATATTAAAAAAGGGTGGAAGCTTTACTCTCTTGGGTATTTCTGTATGTATTCCCTGTTTATCATTGGTTTTCGATCTCAGTTTGTTATATGATTGATGTTAAAAGCATAGCAGTTTTTGAATCATGGGGTAAATATAAACATCCAAGCAGACCTCGTCTTAAAACCAATATAGAACATTTGAGACTGACGAAATGTCAAAAGCCAGAAAAGGTGAGTATAATATAGGTTCTAAGGGGCATTTCTATTCTTTTTAAATAGAGATAAAAAAAAAAATGTAGAAATTTAAGATAGATGGTATCAGGGATATTGCGGAAGCTCCTTTCTCTTGTTCTTTTTCTTGGTTATTGTTTCATTCGTTACTGAACCACATTTTTACGTTAAGGACTTGTTAGAGATGTTAGGTTAAATTTTTTGCTTCAGTTTATGTGATTAACTCTAGCTATATATGTGTTTAAATAATGTGCGAAGTTCATACCACCATCAATTTGATATTTTATCTTTCATTTACACAGGGGTCCCTGTTTTCCTATGCGGGTTTGCAATTGCATTTCTTGGACCTCTTTGTCATGCTCCAACAGTGATGCTTGCCAACTTTGTTGTTACTCCCATAGAATTGAGGTACTTGTATTCATTTCAGTAATACGAACACTGGAGAGTTGGATCTTTATTCTCACATTCTGATGTGAAGCAGTAGCTATTTTTTGTAGGGAAAAATACTTATAAATAAGCAACTTTATATATTATTTATATATGCGAGCATTTCTCGAGTCAGAGGCTTGGGGATGTTTCATCCCTCTCATTTGTCGATTATTTTTTATTTTTTGCTCTGAAGCTTGGTGGTGCCTTTCTTGCGCTTTGGTGAAGCAATTTCCGGGGGACCTCGTTTCCCATTTACACCTGATGCCTTGAAGAAAGTTTTTACAGGCCAAGCTTCGCATGAAGTACTACTTAGTATTGCTCATGTGGTAAGGCTTCTTCTACATACTAATTTCAGTGCTGTGCATGCGGGGTTATCATTGTTACTCTTTTTTGTCTTTGCTCAGGATTAGACTATAAGATCACCTATTAGTAGCAGATCTCAAGATCAAATACTTCAATTAATGAATCGAATTGGTTTGAGAAGCTAGAAGATTGTACTTCTAAAAGATCCATTTTTAAGAGTTGTTGTTGGTTGAGTGCACATAAGGAGGTCAGCTCTGGTTTTGTTGACACCAAATCCTCACTTTTTCTAGCTAAAACTCATAATTACGTTTTAGAGGTCTTCAAGGAGAATGTGAAAATAGATTGTGAAAGATTTTGATGAGTTAGAGAAGTTAGACTTTGGCTCTGTTGATGCAAAAATATTCATGAAAACTTAGTAGGAACAAATGGTTGGCAGATTGAATTGTATAAGCTTAGAGAGAGAGATAGGGGTGTGTGTATGGAGGAGAAGATATATGCATATAGAAGAGGATCAAGGTTCGCATAAAAGGATGTTCGGGCTTACCTTGAGGTAAGTATGAAAGCAAGTATTATATGGTCTCTTACGGTCCTAACTTCCTTGGAATACACACATTAGTGAATGTACAACTTATATACCCCTTCGCAACAAGAAAGACAAACTTGTGTATCAAAATGAAAACTTGCATACTAGGAAGACAATAGATTTGTCAAGATGCAACTCGAGTATTGTTCATTTTACTCCTTGGATGACGCTCGAGTATTGTTCATTTTACTCCTTGGATGACATTCGACAGTGGTGAAATGGAAAGATGCATGAACTTAGTTTCTTATCTTCTCCAATTGTCAATTTTTCTCTCTCTGTACGTCGAACTGCTTGCTGTACTTTTATCAGTCATTCCATTTTCCCAGTTATCTTGTTCTAGAGTTTTGAATGAACGTCAGTTATCTTTATTTGCTCATTCTTCCCTTCATATGATATATCTGCCAAGTAATCTGGAGAACCTAACCAACCATCCCGTGTTGTGTGATTGCGCCATACTGTGTGATCAAATACATCAATCGTCTGTTATTATCCCCAACACTAACACCATGTCACCAACCAAGATCGTTCTCCCCGTGGTTGAGCTGATTCTCCATATTTGCAGTTCTAACATGTGGATATTAGTTCGTACGTTGTCATTTTGTTCGGTTGCTTCATTCGAATTAAAAAACTGACTGAAAGCTTTCTATCGATATTGGCAGTTGTTGGGATGGCTTGTTGCGACGCCCTTTATTTTGGGCGTTGGATACATGTTGTTTTTACCATGTTTCAAGATTTTGGTCCGCAAGTTCAGCACTGGTGCATCAAGCCCAAAGAAGTCACCTCGTTCACACTCAGAAGTCAGACTGAAGGTGAGGGATATCTGA

mRNA sequence

ATGGCGACAGTAGGGCATACACGTCCGACCAGTTGGTTTAACCAAAAGATCGTCGATCCTCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTCGGCACAACCCTGGGACTGTTTCCTATATGCGGGGTCCCTGTTTTCCTATGCGGGTTTGCAATTGCATTTCTTGGACCTCTTTGTCATGCTCCAACAGTGATGCTTGCCAACTTTGTTGTTACTCCCATAGAATTGAGCTTGGTGGTGCCTTTCTTGCGCTTTGGTGAAGCAATTTCCGGGGGACCTCGTTTCCCATTTACACCTGATGCCTTGAAGAAAGTTTTTACAGGCCAAGCTTCGCATGAAGTACTACTTAGTATTGCTCATGTGTTGTTGGGATGGCTTGTTGCGACGCCCTTTATTTTGGGCGTTGGATACATGTTGTTTTTACCATGTTTCAAGATTTTGGTCCGCAAGTTCAGCACTGGTGCATCAAGCCCAAAGAAGTCACCTCGTTCACACTCAGAAGTCAGACTGAAGGTGAGGGATATCTGA

Coding sequence (CDS)

ATGGCGACAGTAGGGCATACACGTCCGACCAGTTGGTTTAACCAAAAGATCGTCGATCCTCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTCGGCACAACCCTGGGACTGTTTCCTATATGCGGGGTCCCTGTTTTCCTATGCGGGTTTGCAATTGCATTTCTTGGACCTCTTTGTCATGCTCCAACAGTGATGCTTGCCAACTTTGTTGTTACTCCCATAGAATTGAGCTTGGTGGTGCCTTTCTTGCGCTTTGGTGAAGCAATTTCCGGGGGACCTCGTTTCCCATTTACACCTGATGCCTTGAAGAAAGTTTTTACAGGCCAAGCTTCGCATGAAGTACTACTTAGTATTGCTCATGTGTTGTTGGGATGGCTTGTTGCGACGCCCTTTATTTTGGGCGTTGGATACATGTTGTTTTTACCATGTTTCAAGATTTTGGTCCGCAAGTTCAGCACTGGTGCATCAAGCCCAAAGAAGTCACCTCGTTCACACTCAGAAGTCAGACTGAAGGTGAGGGATATCTGA

Protein sequence

MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLKVRDI

Homology

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BLAST of Carg22870 vs. NCBI nr
Match: KAG7015900.1 (hypothetical protein SDJN02_21003, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.4 bits (947), Expect = 1.8e-98
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180

Query: 181 VRDI 185
           VRDI
Sbjct: 181 VRDI 184

[Close]

BLAST of Carg22870 vs. NCBI nr
Match: KAG6578321.1 (hypothetical protein SDJN03_22769, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.5 bits (942), Expect = 6.9e-98
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSP SHSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPHSHSEVRLK 180

Query: 181 VRDI 185
           VRDI
Sbjct: 181 VRDI 184

[Close]

BLAST of Carg22870 vs. NCBI nr
Match: XP_022939704.1 (uncharacterized protein LOC111445511 isoform X1 [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 8.4e-96
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSP SHSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPHSHSEVRLK 180

Query: 181 V 182
           +
Sbjct: 181 L 181

[Close]

BLAST of Carg22870 vs. NCBI nr
Match: XP_022993435.1 (uncharacterized protein LOC111489450 [Cucurbita maxima])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILG+GYMLFLPCFKILVRKFSTGASSPKKSP SHSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGIGYMLFLPCFKILVRKFSTGASSPKKSPHSHSEVRLK 180

Query: 181 V 182
           +
Sbjct: 181 L 181

[Close]

BLAST of Carg22870 vs. NCBI nr
Match: XP_023551372.1 (uncharacterized protein LOC111809211 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILG+GYMLFLPCFKILVRKFSTGASSPKKSP  HSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGIGYMLFLPCFKILVRKFSTGASSPKKSPHPHSEVRLK 180

Query: 181 V 182
           +
Sbjct: 181 L 181

[Close]

BLAST of Carg22870 vs. ExPASy TrEMBL
Match: A0A6J1FI05 (uncharacterized protein LOC111445511 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445511 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.1e-96
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSP SHSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPHSHSEVRLK 180

Query: 181 V 182
           +
Sbjct: 181 L 181

[Close]

BLAST of Carg22870 vs. ExPASy TrEMBL
Match: A0A6J1JYI3 (uncharacterized protein LOC111489450 OS=Cucurbita maxima OX=3661 GN=LOC111489450 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.3e-96
Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILG+GYMLFLPCFKILVRKFSTGASSPKKSP SHSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGIGYMLFLPCFKILVRKFSTGASSPKKSPHSHSEVRLK 180

Query: 181 V 182
           +
Sbjct: 181 L 181

[Close]

BLAST of Carg22870 vs. ExPASy TrEMBL
Match: A0A1S3B2V5 (uncharacterized protein LOC103485404 OS=Cucumis melo OX=3656 GN=LOC103485404 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.3e-90
Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGH RPTSWF+QKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFA
Sbjct: 1   MATVGHARPTSWFSQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTG+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAH+LLGWLVA PFILG+GY+LFLPCFKILVRKFST ASSPKKSP SH+++RLK
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKSPHSHTDIRLK 180

Query: 181 VRDI 185
           VRD+
Sbjct: 181 VRDV 184

[Close]

BLAST of Carg22870 vs. ExPASy TrEMBL
Match: A0A0A0LSU8 (DUF2062 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G401460 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.3e-89
Identity = 164/184 (89.13%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGH R TSWFNQKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFA
Sbjct: 1   MATVGHARSTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTG+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAH+LLGWLVA PFILG+GY+LFLPCFKILVRKFST ASSPKK P SH++++LK
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLK 180

Query: 181 VRDI 185
           VRD+
Sbjct: 181 VRDV 184

[Close]

BLAST of Carg22870 vs. ExPASy TrEMBL
Match: A0A6J1DE06 (uncharacterized protein LOC111020189 OS=Momordica charantia OX=3673 GN=LOC111020189 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.1e-80
Identity = 152/184 (82.61%), Postives = 165/184 (89.67%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MA+ G  R TSWF++KIVDPLL+ILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFA
Sbjct: 1   MASAGFARQTSWFSRKIVDPLLKILQRGAEPKQLAFSAALGLTLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IA LG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISGGPRFPFTPDALKK+FTGQAS
Sbjct: 61  IALLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKIFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           +EVLLSIAH+LLGWLVA PFIL  GY+LFLPCFKILV KFST +SSP+K   SHS+ +LK
Sbjct: 121 YEVLLSIAHLLLGWLVAAPFILCTGYLLFLPCFKILVSKFSTVSSSPRKPTNSHSDAKLK 180

Query: 181 VRDI 185
            RDI
Sbjct: 181 ARDI 184

[Close]

BLAST of Carg22870 vs. TAIR 10
Match: AT4G10140.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-62
Identity = 119/176 (67.61%), Postives = 134/176 (76.14%), Query Frame = 0


Query: 8   RPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFLGPL 67
           R  +WFN+KI DPLLQIL+RG EPKQLAFSAALG TLG+FPICGVPV LCG A A LG  
Sbjct: 7   RLKAWFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSS 66

Query: 68  CHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVLLSI 127
           CHAPTVMLAN + TP+EL+LVVPFLR GE ++GGP FP T DALKKVFTGQAS EV LSI
Sbjct: 67  CHAPTVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSI 126

Query: 128 AHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLKVRD 184
            + LLGWLVATPF     Y++ LPCF ILVRKF   AS+ K      +E+  K RD
Sbjct: 127 GNALLGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRD 182

[Close]

BLAST of Carg22870 vs. TAIR 10
Match: AT1G33490.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062 (InterPro:IPR018639); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10140.1); Has 88 Blast hits to 88 proteins in 29 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 235.3 bits (599), Expect = 3.8e-62
Identity = 115/157 (73.25%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFLGPLCHAP 71
           WF++KI +PL+QIL+RGAEPKQLAFSAALG T+G+FPICGV V LCG AIA LG LCHAP
Sbjct: 11  WFDKKISEPLIQILRRGAEPKQLAFSAALGITMGVFPICGVTVLLCGVAIASLGSLCHAP 70

Query: 72  TVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVLLSIAHVL 131
           TVMLANF+ TPIELSLVVPFLR GE I+GGP FP T DALKKVFTGQAS +V LSI + L
Sbjct: 71  TVMLANFIATPIELSLVVPFLRLGEKITGGPHFPLTSDALKKVFTGQASRDVFLSIGNAL 130

Query: 132 LGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPK 169
           LGWL+A PF++   Y++FLPCFKILVRKFS+  S+ K
Sbjct: 131 LGWLIAAPFVIVALYIMFLPCFKILVRKFSSVDSTAK 167

The following BLAST results are available for this feature:

BLAST of Carg22870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015900.1	1.8e-98	100.00	hypothetical protein SDJN02_21003, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6578321.1	6.9e-98	99.46	hypothetical protein SDJN03_22769, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022939704.1	8.4e-96	98.90	uncharacterized protein LOC111445511 isoform X1 [Cucurbita moschata]	[more]
XP_022993435.1	1.1e-95	98.34	uncharacterized protein LOC111489450 [Cucurbita maxima]	[more]
XP_023551372.1	4.2e-95	97.79	uncharacterized protein LOC111809211 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22870 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg22870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FI05	4.1e-96	98.90	uncharacterized protein LOC111445511 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JYI3	5.3e-96	98.34	uncharacterized protein LOC111489450 OS=Cucurbita maxima OX=3661 GN=LOC111489450...	[more]
A0A1S3B2V5	3.3e-90	90.22	uncharacterized protein LOC103485404 OS=Cucumis melo OX=3656 GN=LOC103485404 PE=...	[more]
A0A0A0LSU8	6.3e-89	89.13	DUF2062 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G401460 PE=...	[more]
A0A6J1DE06	3.1e-80	82.61	uncharacterized protein LOC111020189 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]

BLAST of Carg22870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10140.1	1.3e-62	67.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G33490.1	3.8e-62	73.25	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2062...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35102	E3 UBIQUITIN-PROTEIN LIGASE	coord: 10..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22870-RA	Carg22870-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane