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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGGGCGGGCGGGCGGGCGGGCGGGCAGGGTCAAAATGAAAACCCGTTTGTTGTCTGTTTTTTTTTTTCTTTTTTTTCTATTTTCAGGCCACGGACTTCCCGCTTCTCTCCGGCTTTCTTTTTTTTCTTTTCGCTTTCTTTCTTGCGAACTCCTCCGGCGGTTTCTATTGAACTACGAAGGGCGAATAAAAATGTCTAAAGAAACTTTTGTCACGATTAATTCCTACCCCTAACCATCAATCCTCTACATTTCGATCCGTTTCTTCTTAATTGTACCATGTTTCTGCAGTTTCTTCTCAATTCGAGTGCCTTTAGATCCTCCAAGGTTGTTCGTCACTCCGTTCTCGTCAAGAACGATCCATTTCTGGATGCTGGATTCTGGATTCGTTTTTGCCATCCCAGACGGTGCTATAGTGTTCCGAATTCTCATCCTCATCAATCGTGTACGCAGTTTCTTCTTCTTTCTGTTTTATCTCTATTGATGCCTGTTTTGATGGTTTTGGAAATCGACGATTATATTTATTTATTGTCATGTTTGAATTCGGAGGTGGAAGATTTGTGGAGATGGAAGTGGGCGAGTTTGATATTTTGTTATGTGTGAGAGTGATGACGGTAGTGAGAGGAATTCACTTGACTAACCCGCATTTTTACGCCAAGGCGTTGATGGTTCTGTTGTTTATGACGTTCAGAAGTTTTGTTTCTGTACTCTGCACTGAGTTTAAATTTATAGGAATGCTCTTTGTTGGACTTGCACAGATTTCTTCACCCCAAAAATATGGTTGGGTAATTTCTATTTTTTATTTTATTTTGCATCGTGTCAACCGTTTTGCAGGCTCTTGAATGCTCAATTTGAAAGGGACGACTTAAAACTGTAA mRNA sequence ATGGCGGGCGGGCGGGCGGGCGGGCGGGCAGGGCCACGGACTTCCCGCTTCTCTCCGGCTTTCTTTTTTTTCTTTTCGCTTTCTTTCTTGCGAACTCCTCCGGCGTTTCTTCTCAATTCGAGTGCCTTTAGATCCTCCAAGGTTGTTCGTCACTCCGTTCTCGTCAAGAACGATCCATTTCTGGATGCTGGATTCTGGATTCGTTTTTGCCATCCCAGACGGCTCTTGAATGCTCAATTTGAAAGGGACGACTTAAAACTGTAA Coding sequence (CDS) ATGGCGGGCGGGCGGGCGGGCGGGCGGGCAGGGCCACGGACTTCCCGCTTCTCTCCGGCTTTCTTTTTTTTCTTTTCGCTTTCTTTCTTGCGAACTCCTCCGGCGTTTCTTCTCAATTCGAGTGCCTTTAGATCCTCCAAGGTTGTTCGTCACTCCGTTCTCGTCAAGAACGATCCATTTCTGGATGCTGGATTCTGGATTCGTTTTTGCCATCCCAGACGGCTCTTGAATGCTCAATTTGAAAGGGACGACTTAAAACTGTAA Protein sequence MAGGRAGGRAGPRTSRFSPAFFFFFSLSFLRTPPAFLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRRLLNAQFERDDLKL
Homology
BLAST of Carg22853 vs. NCBI nr
Match: KAG7015916.1 (hypothetical protein SDJN02_21020, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.9 bits (455), Expect = 9.6e-42 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
Query: 1 MAGGRAGGRAGPRTSRFSPAFFFFFSLSFLRTPPAFLLNSSAFRSSKVVRHSVLVKNDPF 60
MAGGRAGGRAGPRTSRFSPAFFFFFSLSFLRTPPAFLLNSSAFRSSKVVRHSVLVKNDPF
Sbjct: 1 MAGGRAGGRAGPRTSRFSPAFFFFFSLSFLRTPPAFLLNSSAFRSSKVVRHSVLVKNDPF 60
Query: 61 LDAGFWIRFCHPRRLLNAQFERDDLKL 88
LDAGFWIRFCHPRRLLNAQFERDDLKL
Sbjct: 61 LDAGFWIRFCHPRRLLNAQFERDDLKL 87
BLAST of Carg22853 vs. NCBI nr
Match: KAG6578339.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 86.3 bits (212), Expect = 1.4e-13 Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
Query: 36 FLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRR 75
FLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRR
Sbjct: 612 FLLNSSAFRSSKVVRHSVLVKNDPFLDAGFWIRFCHPRR 650
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG7015916.1 | 9.6e-42 | 100.00 | hypothetical protein SDJN02_21020, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6578339.1 | 1.4e-13 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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