Carg22840 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22840
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	lisH domain and HEAT repeat-containing protein KIAA1468-like
Location	Carg_Chr15: 405577 .. 406811 (-)
RNA-Seq Expression	Carg22840
Synteny	Carg22840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTACATCTTTTATCCAAGATCTTCCAACTCTCAGCGGCACCACCTACGTCAAGTTCATTGATGCGTCGCCGTGAGAGAGCTGATGCATTTTGTGAAGCAATTCGTGCTTTGGACGCTACAGGTTTGTTTCATTCTGTGAGACTTATAAATTGGACGCTCAAACTTGCTCTCTTCTGTTGATTTTTTTATTTACTCCCACTGACCAGTGAAACTCTTACATTTGAATCATATAAAATTATTCGCTTGTCTTAGACCTATCGGCAACCAGCATACGGGAGTTGTTCCTTCCATCCATACAAAACCTTTTAAAAGATTTAGACGCTCTGGATCCAGCACACAAGGAAGCTCTTGAAATCATAATGAAGGAGAGATCAGGAGGAACATTTGAAACCATCGGTAAGGTGATGGGTGCACATCTCGGAATAGCTTCATCCGTCAGCAGTTTCTTTGGTGGTGATGGTGGCCTGTTGGGAAAGAAAGAAACTTTGGAGCCATCTCCAAGCGAACCAGTTGAGCCACCAAATCCTGTGCTGCCGCCACCAGCTGAAGACACTAGGTTCAGACGAATCATGCGAGGAGGTTTCACCGACATGCTCCGAGGCAAAGTGAAAAGTCAAGACGATTCTCCGAGCTTATGACATGGGAGACTTCTCGTAGGCACCATTCAGGCATGTCTTCTCCTTTCCTTTCTCAGTATAGTCTCTAGCGAAGGACCTCTTCTGTCTTTGCATGAAATCAGAATACCATGTCAAATAAGGTTACATTCTTTCATTAAATTATTTTTTTCACCTTATCTCACTTTTGTACCCTACTTCCAATAGTGAAAAGAAAAAAAAATATATATTGTATCCTAAGAAGTAATGTTTCATTGCATTACATATGTGTAAAACGAAAATATCCGCATAATTTAGGATCTCTTTAATGCCTTATAGTCATCTCTTTCCCTTGCTATATCAGCATGTTACTGGTTTTGCTCTTCATTTCACCCATTTGATTTGGTATCCTTCTGTTTATATTTTATATCTTGATAGTTTTGAAAAGTTAATTAAAAAATATTATATTTAGGAAGCAATGCATGCGACTTCAAACCGCCCGCAAAGGTAGGACGTTTTCCATTTTATAAGAACTTTTGTACCAGAAACAATCGTATCTCCAGTTATAGCTCCGCGGTATGTAAATTATATCTTTTCTCACCATCTTCATAGTGTATGGACAAATGTATGCATTTTGAT

mRNA sequence

ATGCTACATCTTTTATCCAAGATCTTCCAACTCTCAGCGGCACCACCTACGTCAAGTTCATTGATGCGTCGCCGTGAGAGAGCTGATGCATTTTGTGAAGCAATTCGTGCTTTGGACGCTACAGACCTATCGGCAACCAGCATACGGGAGTTGTTCCTTCCATCCATACAAAACCTTTTAAAAGATTTAGACGCTCTGGATCCAGCACACAAGGAAGCTCTTGAAATCATAATGAAGGAGAGATCAGGAGGAACATTTGAAACCATCGGTAAGGTGATGGGTGCACATCTCGGAATAGCTTCATCCGTCAGCAGTTTCTTTGGTGGTGATGGTGGCCTGTTGGGAAAGAAAGAAACTTTGGAGCCATCTCCAAGCGAACCAGTTGAGCCACCAAATCCTGTGCTGCCGCCACCAGCTGAAGACACTAGGTTCAGACGAATCATGCGAGGAGGTTTCACCGACATGCTCCGAGGCAAAGTGAAAAGTCAAGACGATTCTCCGAGCTTATGACATGGGAGACTTCTCGTAGGCACCATTCAGGCATGTCTTCTCCTTTCCTTTCTCAGTATAGTCTCTAGCGAAGGACCTCTTCTGTCTTTGCATGAAATCAGAATACCATGTCAAATAAGGTTACATTCTTTCATTAAATTATTTTTTTCACCTTATCTCACTTTTGTACCCTACTTCCAATAGTGAAAAGAAAAAAAAATATATATTGTATCCTAAGAAGTAATGTTTCATTGCATTACATATGTGTAAAACGAAAATATCCGCATAATTTAGGATCTCTTTAATGCCTTATAGTCATCTCTTTCCCTTGCTATATCAGCATGTTACTGGTTTTGCTCTTCATTTCACCCATTTGATTTGGTATCCTTCTGTTTATATTTTATATCTTGATAGTTTTGAAAAGTTAATTAAAAAATATTATATTTAGGAAGCAATGCATGCGACTTCAAACCGCCCGCAAAGGTAGGACGTTTTCCATTTTATAAGAACTTTTGTACCAGAAACAATCGTATCTCCAGTTATAGCTCCGCGGTATGTAAATTATATCTTTTCTCACCATCTTCATAGTGTATGGACAAATGTATGCATTTTGAT

Coding sequence (CDS)

ATGCTACATCTTTTATCCAAGATCTTCCAACTCTCAGCGGCACCACCTACGTCAAGTTCATTGATGCGTCGCCGTGAGAGAGCTGATGCATTTTGTGAAGCAATTCGTGCTTTGGACGCTACAGACCTATCGGCAACCAGCATACGGGAGTTGTTCCTTCCATCCATACAAAACCTTTTAAAAGATTTAGACGCTCTGGATCCAGCACACAAGGAAGCTCTTGAAATCATAATGAAGGAGAGATCAGGAGGAACATTTGAAACCATCGGTAAGGTGATGGGTGCACATCTCGGAATAGCTTCATCCGTCAGCAGTTTCTTTGGTGGTGATGGTGGCCTGTTGGGAAAGAAAGAAACTTTGGAGCCATCTCCAAGCGAACCAGTTGAGCCACCAAATCCTGTGCTGCCGCCACCAGCTGAAGACACTAGGTTCAGACGAATCATGCGAGGAGGTTTCACCGACATGCTCCGAGGCAAAGTGAAAAGTCAAGACGATTCTCCGAGCTTATGA

Protein sequence

MLHLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKDLDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEPSPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL

Homology

[Close]

BLAST of Carg22840 vs. NCBI nr
Match: KAG7015929.1 (hypothetical protein SDJN02_21033, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.6 bits (841), Expect = 3.3e-86
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MLHLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLL 60
           MLHLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLL
Sbjct: 1   MLHLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLL 60

Query: 61  KDLDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETL 120
           KDLDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETL
Sbjct: 61  KDLDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETL 120

Query: 121 EPSPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
           EPSPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL
Sbjct: 121 EPSPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 169

[Close]

BLAST of Carg22840 vs. NCBI nr
Match: XP_023550500.1 (lisH domain and HEAT repeat-containing protein KIAA1468 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 3    HLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 62
            +LLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD
Sbjct: 1017 YLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 1076

Query: 63   LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 122
            LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP
Sbjct: 1077 LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 1136

Query: 123  SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
            SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL
Sbjct: 1137 SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 1183

[Close]

BLAST of Carg22840 vs. NCBI nr
Match: XP_022938627.1 (lisH domain and HEAT repeat-containing protein KIAA1468-like [Cucurbita moschata])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 3    HLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 62
            +LLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD
Sbjct: 1017 YLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 1076

Query: 63   LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 122
            LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP
Sbjct: 1077 LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 1136

Query: 123  SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
            SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL
Sbjct: 1137 SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 1183

[Close]

BLAST of Carg22840 vs. NCBI nr
Match: XP_022992815.1 (lisH domain and HEAT repeat-containing protein KIAA1468-like [Cucurbita maxima])

HSP 1 Score: 322.0 bits (824), Expect = 3.0e-84
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 3    HLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 62
            +LLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD
Sbjct: 1017 YLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 1076

Query: 63   LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 122
            LDALDPAHKEALEII+KERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP
Sbjct: 1077 LDALDPAHKEALEIILKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 1136

Query: 123  SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
            SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL
Sbjct: 1137 SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 1183

[Close]

BLAST of Carg22840 vs. NCBI nr
Match: KAG6578348.1 (RAB11-binding protein RELCH-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309.3 bits (791), Expect = 2.0e-80
Identity = 158/164 (96.34%), Postives = 161/164 (98.17%), Query Frame = 0


Query: 6    SKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKDLDA 65
            SK   +++APPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKDLDA
Sbjct: 1023 SKYRSMNSAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKDLDA 1082

Query: 66   LDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEPSPS 125
            LDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEPSPS
Sbjct: 1083 LDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEPSPS 1142

Query: 126  EPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
            EPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL
Sbjct: 1143 EPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 1186

[Close]

BLAST of Carg22840 vs. ExPASy TrEMBL
Match: A0A6J1FEL5 (lisH domain and HEAT repeat-containing protein KIAA1468-like OS=Cucurbita moschata OX=3662 GN=LOC111444806 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.6e-85
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 3    HLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 62
            +LLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD
Sbjct: 1017 YLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 1076

Query: 63   LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 122
            LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP
Sbjct: 1077 LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 1136

Query: 123  SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
            SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL
Sbjct: 1137 SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 1183

[Close]

BLAST of Carg22840 vs. ExPASy TrEMBL
Match: A0A6J1JWR7 (lisH domain and HEAT repeat-containing protein KIAA1468-like OS=Cucurbita maxima OX=3661 GN=LOC111489035 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 3    HLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 62
            +LLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD
Sbjct: 1017 YLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 1076

Query: 63   LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 122
            LDALDPAHKEALEII+KERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP
Sbjct: 1077 LDALDPAHKEALEIILKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 1136

Query: 123  SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
            SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL
Sbjct: 1137 SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 1183

[Close]

BLAST of Carg22840 vs. ExPASy TrEMBL
Match: A0A1S3B2K8 (lisH domain and HEAT repeat-containing protein KIAA1468 homolog OS=Cucumis melo OX=3656 GN=LOC103485447 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 149/167 (89.22%), Postives = 157/167 (94.01%), Query Frame = 0


Query: 3    HLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 62
            +LLSKIFQLSAAPP SS+LMRR ERADAFCEAIRALDATDLS TSIRELFLP+IQNLL+D
Sbjct: 1018 YLLSKIFQLSAAPPMSSALMRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRD 1077

Query: 63   LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEP 122
            LDALDPAHKEALEIIMKERSGGTFETI KVMGAHLGIASSV++FFG DGG+LGKKE+LEP
Sbjct: 1078 LDALDPAHKEALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGILGKKESLEP 1137

Query: 123  SPSEPVEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
             PSEPVEPPNP  PPPAEDTRFRRIMRG FTDMLRGKVKSQDDS SL
Sbjct: 1138 IPSEPVEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQDDSQSL 1184

[Close]

BLAST of Carg22840 vs. ExPASy TrEMBL
Match: A0A5D3C5Y5 (LisH domain and HEAT repeat-containing protein KIAA1468-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G001890 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.6e-73
Identity = 145/162 (89.51%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 8    IFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKDLDALD 67
            IFQLSAAPP SS+LMRR ERADAFCEAIRALDATDLS TSIRELFLP+IQNLL+DLDALD
Sbjct: 1021 IFQLSAAPPMSSALMRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDLDALD 1080

Query: 68   PAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEPSPSEP 127
            PAHKEALEIIMKERSGGTFETI KVMGAHLGIASSV++FFG DGG+LGKKE+LEP PSEP
Sbjct: 1081 PAHKEALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGILGKKESLEPIPSEP 1140

Query: 128  VEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
            VEPPNP  PPPAEDTRFRRIMRG FTDMLRGKVKSQDDS SL
Sbjct: 1141 VEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQDDSQSL 1182

[Close]

BLAST of Carg22840 vs. ExPASy TrEMBL
Match: A0A5A7SL60 (LisH domain and HEAT repeat-containing protein KIAA1468-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold7507G00070 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.6e-73
Identity = 145/162 (89.51%), Postives = 152/162 (93.83%), Query Frame = 0


Query: 8    IFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKDLDALD 67
            IFQLSAAPP SS+LMRR ERADAFCEAIRALDATDLS TSIRELFLP+IQNLL+DLDALD
Sbjct: 1000 IFQLSAAPPMSSALMRRHERADAFCEAIRALDATDLSPTSIRELFLPTIQNLLRDLDALD 1059

Query: 68   PAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLEPSPSEP 127
            PAHKEALEIIMKERSGGTFETI KVMGAHLGIASSV++FFG DGG+LGKKE+LEP PSEP
Sbjct: 1060 PAHKEALEIIMKERSGGTFETISKVMGAHLGIASSVTNFFGVDGGILGKKESLEPIPSEP 1119

Query: 128  VEPPNPVLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDSPSL 170
            VEPPNP  PPPAEDTRFRRIMRG FTDMLRGKVKSQDDS SL
Sbjct: 1120 VEPPNPTPPPPAEDTRFRRIMRGSFTDMLRGKVKSQDDSQSL 1161

[Close]

BLAST of Carg22840 vs. TAIR 10
Match: AT5G16210.1 (HEAT repeat-containing protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-55
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 3    HLLSKIFQLSAAPPTSSSLMRRRERADAFCEAIRALDATDLSATSIRELFLPSIQNLLKD 62
            +LLSKI QLSA+P +S+ + RRRERA+AFCEAIRALDATDLS TS++E  LP+IQNLLKD
Sbjct: 1009 YLLSKILQLSASPSSSTDVNRRRERANAFCEAIRALDATDLSQTSVKEYLLPAIQNLLKD 1068

Query: 63   LDALDPAHKEALEIIMKERSGGTFETIGKVMGAHLGIASSVSSFFGGDGGLLGKKETLE- 122
             DALDPAHKEALEIIMKERSGGTFE I K MGAHLGIASSV+S F G+GGLLGKKE  E 
Sbjct: 1069 PDALDPAHKEALEIIMKERSGGTFEAISKAMGAHLGIASSVTSLF-GEGGLLGKKEATES 1128

Query: 123  PSPSEPV--EPPNP-VLPPPAEDTRFRRIMRGGFTDMLRGKVKSQDDS 167
             +P  P    P +P V+   +EDTRFRRIMRG FT+MLR K K+QD++
Sbjct: 1129 TAPGSPTGQGPESPKVVAAASEDTRFRRIMRGNFTEMLRSKAKTQDET 1175

The following BLAST results are available for this feature:

BLAST of Carg22840 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015929.1	3.3e-86	100.00	hypothetical protein SDJN02_21033, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023550500.1	1.4e-84	99.40	lisH domain and HEAT repeat-containing protein KIAA1468 [Cucurbita pepo subsp. p...	[more]
XP_022938627.1	1.4e-84	99.40	lisH domain and HEAT repeat-containing protein KIAA1468-like [Cucurbita moschata...	[more]
XP_022992815.1	3.0e-84	98.80	lisH domain and HEAT repeat-containing protein KIAA1468-like [Cucurbita maxima]	[more]
KAG6578348.1	2.0e-80	96.34	RAB11-binding protein RELCH-like protein, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Carg22840 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg22840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEL5	6.6e-85	99.40	lisH domain and HEAT repeat-containing protein KIAA1468-like OS=Cucurbita moscha...	[more]
A0A6J1JWR7	1.5e-84	98.80	lisH domain and HEAT repeat-containing protein KIAA1468-like OS=Cucurbita maxima...	[more]
A0A1S3B2K8	2.8e-75	89.22	lisH domain and HEAT repeat-containing protein KIAA1468 homolog OS=Cucumis melo ...	[more]
A0A5D3C5Y5	2.6e-73	89.51	LisH domain and HEAT repeat-containing protein KIAA1468-like protein OS=Cucumis ...	[more]
A0A5A7SL60	2.6e-73	89.51	LisH domain and HEAT repeat-containing protein KIAA1468-like protein OS=Cucumis ...	[more]

BLAST of Carg22840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16210.1	1.4e-55	70.24	HEAT repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..142
None	No IPR available	PANTHER	PTHR32059:SF1	LISH DOMAIN AND HEAT REPEAT KIAA1468-LIKE PROTEIN	coord: 6..165
IPR040362	RAB11-binding protein RELCH	PANTHER	PTHR32059	RAB11-BINDING PROTEIN RELCH	coord: 6..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22840-RA	Carg22840-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032367	intracellular cholesterol transport
cellular_component	GO:0005802	trans-Golgi network