Carg22730 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22730
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CRIB domain-containing protein RIC4
Location	Carg_Chr11: 5054215 .. 5055550 (-)
RNA-Seq Expression	Carg22730
Synteny	Carg22730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACAACAATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTCTTTTCTCCAACTCTCTCTCTCTCTCTCTTTCGTTCTTCGCTGGTTATTACGAGCTTGTTTGATATCTTATCCCGTTCGAGCTCGAATGGCTAATTTTTGTATGGGTTTTGTATTGAAGGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGGTGAGTTCTTTTATTAATTGAAAAAAGAAATTAAAATATTTACTTCTCCGTGTTATTGGGAAGGTTCGTGGGTCAGTTGGGTCTAGTCGAGTTAAGACGGGTTGATTCTTCGAAAACAAAAATGTATATTTTAAAATTAACAATAAATTCGGGTCAGTTCAATTCAACCCAAGTTAGTTTAGAAGAACCCATGAACCAACCCAATCTATAAAATTTTCATTTATGTGAACGTGATCAAGCCTACCACTAGCAGATATCATCCACTTTAGCTCGTTACATAAAGTCGTGAGTCTCATGATTTTAAAACATGTCTGTTAGAGAGAAGTTTCTACAGCCTTACAAAGGATGCTTCGTTCCCCTATCCAACCGACATGAAATCTCACAAATAAGTTCAAGACCCAACCCAAATCATACGAAATGAATTGGGTTGCTCGAGTTTTATGAATCATCGAGTTTTTTCTTGTTAACACCTGTTATTACACGCACGTTCAAATTATCTTGTCATTATTTCTAAATTCTAATTTTTTCTTTTTCTTTTTTGGGTAATGATATTATTTTGGGAAGTGTACAAAGAGGAGATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGAAAATCAAAAACATATGTTAAAAAAGCTCGTGTTGATTCGATGTAAAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTTATTCGTTCATAATTGCTATAAGGAATGTTGGGGCCTTAAGGTAATGGATTAGA

mRNA sequence

GAACAACAATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGAAAATCAAAAACATATGTTAAAAAAGCTCGTGTTGATTCGATGTAAAATTTCTTATCTATAAAATAACTCGACATGTTACGTGGCTTATTCGTTCATAATTGCTATAAGGAATGTTGGGGCCTTAAGGTAATGGATTAGA

Coding sequence (CDS)

ATGAGACGTAAAATGGAGAGATTTGTTCTTCTTCCTTTCTCGATCGGATGCATCTCCGAATCAAGTGTGGCCGTGGGGATTCAACGTAATGCAACATCCAAACCCACCGACCCTAATTCGTCTCCTCGATCAAGTGAGAAAGATGAAATGGTATTAGAAGAAAGTTTGAAGAACTCACAGAGATTCACAGCACTTGCAAAGCCTAATATAGGAGTTGGGTTTCATAGGCTTTACAAAGGTTTCAAGAATTTCTCTCAATTATTTGTGTACAAAGAGGAGATGGAAGAAATGGAAGTAGGATGTCCCACAGATGTGAAGCATTTGACCCACATCGGCTGTGATGCCACCACAATATCAGATGACCCCAACAATCCCTTCATAGATTGGGAAACTCTTCTAGCTTCCGGCCTCTTCTCTCTTCCCTCTTCTCGTTCTTGGACCGAACTCGAACTCGAACTCGATCATCATCTTTCAAACCCTAATGTTCTACCTCATTCTATTTGA

Protein sequence

MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI

Homology

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BLAST of Carg22730 vs. NCBI nr
Match: KAG7022201.1 (CRIB domain-containing protein RIC4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 340.9 bits (873), Expect = 6.3e-90
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTISD 120
           RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTISD
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTISD 120

Query: 121 DPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           DPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
Sbjct: 121 DPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 167

[Close]

BLAST of Carg22730 vs. NCBI nr
Match: KAG6588282.1 (CRIB domain-containing protein RIC4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.5 bits (859), Expect = 2.6e-88
Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 170

[Close]

BLAST of Carg22730 vs. NCBI nr
Match: XP_022933781.1 (CRIB domain-containing protein RIC4 [Cucurbita moschata])

HSP 1 Score: 327.0 bits (837), Expect = 9.4e-86
Identity = 165/170 (97.06%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELDHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWT--ELELDHHLSNPNVLPHSI 168

[Close]

BLAST of Carg22730 vs. NCBI nr
Match: XP_023520680.1 (CRIB domain-containing protein RIC4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 325.1 bits (832), Expect = 3.6e-85
Identity = 164/170 (96.47%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFT LAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTPLAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELDHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWT--ELELDHHLSNPNVLPHSI 168

[Close]

BLAST of Carg22730 vs. NCBI nr
Match: XP_023006430.1 (CRIB domain-containing protein RIC4 [Cucurbita maxima])

HSP 1 Score: 318.2 bits (814), Expect = 4.3e-83
Identity = 162/170 (95.29%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKN Q
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNLQ 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELD HLSN NVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWT--ELELDDHLSNSNVLPHSI 168

[Close]

BLAST of Carg22730 vs. ExPASy Swiss-Prot
Match: Q9FFD5 (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-21
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MR +MER V+LPFSIGCIS SSVAV    +  SKP   +S     E++E   E+++KN  
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV---LSPLSKPHHHHSRQVIREQEE---EDNMKNVF 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE------MEVGCPTDVKHLTHIGCD 120
           +F A++KP I +G +R++K FK  SQLF  K+E +E      ME+G PT+VKH++HIG +
Sbjct: 61  KFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTNVKHVSHIGWE 120

Query: 121 ATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHL 158
           +   +     P   WE L+   L +  +S+       E++ HL
Sbjct: 121 SGLTA--ATGPGKGWEDLIPPELLAAAASKK------EINPHL 149

[Close]

BLAST of Carg22730 vs. ExPASy Swiss-Prot
Match: Q8GYU0 (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 69  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDP 127
           NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of Carg22730 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-06
Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 77  LYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATT 118
           +YKGFK  SQ+F  ++E +E+E+G PTDVKH+ HIG + ++
Sbjct: 8   IYKGFKCISQIFAVEKERDEIEIGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of Carg22730 vs. ExPASy Swiss-Prot
Match: Q1G3Y0 (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana OX=3702 GN=RIC9 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.8e-05
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 74  FHRLY-KGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTIS 120
           F  LY K FK FS +F  +EE EEME+G PTDV+H++HIG D+++ S
Sbjct: 5   FKGLYNKSFKCFSDIFDVEEE-EEMEIGYPTDVRHVSHIGWDSSSSS 50

[Close]

BLAST of Carg22730 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 9.3e-04
Identity = 24/50 (48.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 77  LYKGFKNFSQLFVYK-EEMEEMEVGCPTDVKHLTHIGCDATTISDDPNNP 126
           L KG +  SQ+F  + E+ EEM++G PTDVKH+ HIG D    SD+   P
Sbjct: 13  LLKGLRYISQVFAIEGEKEEEMQIGNPTDVKHVAHIGWDGP--SDNATAP 60

[Close]

BLAST of Carg22730 vs. ExPASy TrEMBL
Match: A0A6J1F000 (CRIB domain-containing protein RIC4 OS=Cucurbita moschata OX=3662 GN=LOC111441091 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 4.5e-86
Identity = 165/170 (97.06%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELDHHLSNPNVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWT--ELELDHHLSNPNVLPHSI 168

[Close]

BLAST of Carg22730 vs. ExPASy TrEMBL
Match: A0A6J1L039 (CRIB domain-containing protein RIC4 OS=Cucurbita maxima OX=3661 GN=LOC111499156 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.1e-83
Identity = 162/170 (95.29%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKN Q
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNLQ 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK---EEMEEMEVGCPTDVKHLTHIGCDATT 120
           RFTALAKPNIGVGFHRLYKGFKNFSQLFVYK   EEMEEMEVGCPTDVKHLTHIGCDATT
Sbjct: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEMEEMEVGCPTDVKHLTHIGCDATT 120

Query: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           ISDDPNNPFIDWETLLASGLFSLPSSRSWT  ELELD HLSN NVLPHSI
Sbjct: 121 ISDDPNNPFIDWETLLASGLFSLPSSRSWT--ELELDDHLSNSNVLPHSI 168

[Close]

BLAST of Carg22730 vs. ExPASy TrEMBL
Match: A0A1S3B9E6 (CRIB domain-containing protein RIC4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487233 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 3.9e-53
Identity = 119/180 (66.11%), Postives = 131/180 (72.78%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKD---------EMV 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP SSEKD         E  
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCERS 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEME----EMEVGCPTDVKH 120
           LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQLFVYKEEME    EME+G PTDVKH
Sbjct: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120

Query: 121 LTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           +THIGCDAT  S+D  N FI WETLLAS         SW + + +L +    PN+L HSI
Sbjct: 121 VTHIGCDATARSEDAANSFIAWETLLASS--------SWRQFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of Carg22730 vs. ExPASy TrEMBL
Match: A0A0A0LY31 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G658520 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.5e-52
Identity = 119/180 (66.11%), Postives = 132/180 (73.33%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKD---------EMV 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP SSEKD         E +
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSSEKDEDGKEEIGCESL 60

Query: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEME----EMEVGCPTDVKH 120
           LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQLFVYKEEME    EME+G PTDVKH
Sbjct: 61  LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVKH 120

Query: 121 LTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHSI 168
           +THIGCDATT  +D  N FI WETLLAS         SW + + +L +    PN+L HSI
Sbjct: 121 VTHIGCDATT-REDAANSFIAWETLLASS--------SWRQFDDQLSNPKHLPNILGHSI 171

[Close]

BLAST of Carg22730 vs. ExPASy TrEMBL
Match: A0A1S3B8Q2 (CRIB domain-containing protein RIC4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487233 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.8e-51
Identity = 118/181 (65.19%), Postives = 130/181 (71.82%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRS-SEKD---------EM 60
           MRRKMER VLLPFS+GCISE+SVAVGIQ N+T+    P SSP S  EKD         E 
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCER 60

Query: 61  VLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEME----EMEVGCPTDVK 120
            LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQLFVYKEEME    EME+G PTDVK
Sbjct: 61  SLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHLSNPNVLPHS 168
           H+THIGCDAT  S+D  N FI WETLLAS         SW + + +L +    PN+L HS
Sbjct: 121 HVTHIGCDATARSEDAANSFIAWETLLASS--------SWRQFDDQLSNPKHLPNILGHS 173

[Close]

BLAST of Carg22730 vs. TAIR 10
Match: AT5G16490.1 (ROP-interactive CRIB motif-containing protein 4 )

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-22
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 0


Query: 1   MRRKMERFVLLPFSIGCISESSVAVGIQRNATSKPTDPNSSPRSSEKDEMVLEESLKNSQ 60
           MR +MER V+LPFSIGCIS SSVAV    +  SKP   +S     E++E   E+++KN  
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV---LSPLSKPHHHHSRQVIREQEE---EDNMKNVF 60

Query: 61  RFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEE------MEVGCPTDVKHLTHIGCD 120
           +F A++KP I +G +R++K FK  SQLF  K+E +E      ME+G PT+VKH++HIG +
Sbjct: 61  KFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTNVKHVSHIGWE 120

Query: 121 ATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELELDHHL 158
           +   +     P   WE L+   L +  +S+       E++ HL
Sbjct: 121 SGLTA--ATGPGKGWEDLIPPELLAAAASKK------EINPHL 149

[Close]

BLAST of Carg22730 vs. TAIR 10
Match: AT1G27380.2 (ROP-interactive CRIB motif-containing protein 2 )

HSP 1 Score: 58.2 bits (139), Expect = 7.6e-09
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 69  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDP 127
           NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of Carg22730 vs. TAIR 10
Match: AT1G27380.1 (ROP-interactive CRIB motif-containing protein 2 )

HSP 1 Score: 58.2 bits (139), Expect = 7.6e-09
Identity = 31/64 (48.44%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 69  NIGVGFHRLYKGFKNFSQLFV-YKEEME----EMEVGCPTDVKHLTHIGCDAT-TISDDP 127
           NI  G +R+ + FK+FS  F+ Y+EE +    EME+G PTDVKHL+HIG D T T  D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of Carg22730 vs. TAIR 10
Match: AT4G04900.1 (ROP-interactive CRIB motif-containing protein 10 )

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 21/41 (51.22%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 77  LYKGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATT 118
           +YKGFK  SQ+F  ++E +E+E+G PTDVKH+ HIG + ++
Sbjct: 8   IYKGFKCISQIFAVEKERDEIEIGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of Carg22730 vs. TAIR 10
Match: AT1G61795.1 (PAK-box/P21-Rho-binding family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.7e-06
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0


Query: 74  FHRLY-KGFKNFSQLFVYKEEMEEMEVGCPTDVKHLTHIGCDATTIS 120
           F  LY K FK FS +F  +EE EEME+G PTDV+H++HIG D+++ S
Sbjct: 5   FKGLYNKSFKCFSDIFDVEEE-EEMEIGYPTDVRHVSHIGWDSSSSS 50

The following BLAST results are available for this feature:

BLAST of Carg22730 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022201.1	6.3e-90	100.00	CRIB domain-containing protein RIC4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588282.1	2.6e-88	98.24	CRIB domain-containing protein RIC4, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022933781.1	9.4e-86	97.06	CRIB domain-containing protein RIC4 [Cucurbita moschata]	[more]
XP_023520680.1	3.6e-85	96.47	CRIB domain-containing protein RIC4 [Cucurbita pepo subsp. pepo]	[more]
XP_023006430.1	4.3e-83	95.29	CRIB domain-containing protein RIC4 [Cucurbita maxima]	[more]

BLAST of Carg22730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFD5	2.2e-21	40.49	CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1...	[more]
Q8GYU0	1.1e-07	48.44	CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1...	[more]
Q9M0Y9	2.6e-06	51.22	CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE...	[more]
Q1G3Y0	3.8e-05	55.32	CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana OX=3702 GN=RIC9 PE=1...	[more]
Q1G3K8	9.3e-04	48.00	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1...	[more]

BLAST of Carg22730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F000	4.5e-86	97.06	CRIB domain-containing protein RIC4 OS=Cucurbita moschata OX=3662 GN=LOC11144109...	[more]
A0A6J1L039	2.1e-83	95.29	CRIB domain-containing protein RIC4 OS=Cucurbita maxima OX=3661 GN=LOC111499156 ...	[more]
A0A1S3B9E6	3.9e-53	66.11	CRIB domain-containing protein RIC4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LY31	2.5e-52	66.11	CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G658520 PE=4 S...	[more]
A0A1S3B8Q2	2.8e-51	65.19	CRIB domain-containing protein RIC4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Carg22730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16490.1	1.6e-22	40.49	ROP-interactive CRIB motif-containing protein 4	[more]
AT1G27380.2	7.6e-09	48.44	ROP-interactive CRIB motif-containing protein 2	[more]
AT1G27380.1	7.6e-09	48.44	ROP-interactive CRIB motif-containing protein 2	[more]
AT4G04900.1	1.9e-07	51.22	ROP-interactive CRIB motif-containing protein 10	[more]
AT1G61795.1	2.7e-06	55.32	PAK-box/P21-Rho-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 98..133 e-value: 1.7E-4 score: 21.9
IPR000095	CRIB domain	PROSITE	PS50108	CRIB	coord: 99..112 score: 8.307275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..51
None	No IPR available	PANTHER	PTHR46931:SF6	CRIB DOMAIN-CONTAINING PROTEIN RIC4	coord: 1..158
IPR044509	CRIB domain-containing protein RIC2/4	PANTHER	PTHR46931	CRIB DOMAIN-CONTAINING PROTEIN RIC2	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22730-RA	Carg22730-RA	mRNA