Carg22700 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22700
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ML domain-containing protein
Location	Carg_Chr11: 4812047 .. 4814865 (-)
RNA-Seq Expression	Carg22700
Synteny	Carg22700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTATCGCTCGTCGAGGAGTTTTCTTCTTTCTTCATCGTCACCCATTTCCCTTCAGATCGGCCCTTCAACGCCGATCATCCACGAGATCATGGACGGGCGAATGTTCAGTCGCATCCTCTTTCTTCTCTTCGCGGTTCATTTACTCTTGCCGGCCATCTCCGCTGCCAAATTCGACTATTGCGGTCAGTTTCTCTCTTTCAACCTTCAATTTCTTCACTTTTCTATTTTGTCGGAAATAACCTAAGGACGAGTTCGCCTTCCTTTTGTTGTTTGGTTTCCGATCGTCTTGATTCGAGATAAGAAAGAAATTATCCGAGGAAAAGGAACTTATGACTGTTTTGAATTCTGGATTTTTCTATTTTTTGATTAATTGATGTTCGATTGTGAATTGGAACCAGACAAGAGAGGTAATTATCCTGTGAAGGTCGATGGACTTAAAGTATCTCCTTATCCAGTGAAGGGTGGGAAGCCTGCCACGTTTGCCGTTTCAGCCTCTTCTGGTAAGCTTTGGTCCTCTGCATGCTCCAATTAGTTTTCTTCATTTTAATCTGCTTACTCTCTCTCACCTTACCTTTTGGCTTATGATTCATATTTGGTAAGGACTAAGGGTACCAGAAACCTAATTATGGCTGTTTGTTATGCGCTGTAAATTGTTACTGTAGCTATGGCCTAACACTGATTGGAGAGGTTTCCTCTGGCCCTTCAGCTATGGAATGAAATTGAAGTGTTTGATATGGATCTTAAACTTCTTTTCAAGCTATTTATTTTGTGTTCATCTTTTCATATTTGTGGAAAACCCCAATGACATGTAGTATTCAAGCAATCTTGTTAGATTTTTATAGCAATTTGAAGAAGTCAACTGTAATCCTGGTGCGCAAAAACACACCTTAAGCCTTGCAATGATCTAATCATCTCAACTCAGATTGAGATCCATGTTTGGTCATGCACGAATGCTCTATGCAAATCCGAAAAAGTTATTAACTGGATGAATGGATGTAGTGGAGGTGAAAGTAGGAGCTATTGCACTTTAGCGTGCCTCATGCTTTAGAAAACATTGGTTTATCCTTTGTTTTTCCACACTAATTCTCGGAGCACTTCATTTTGAATTTTTTTGCTCACTCCAATCCTTGTGTTTAGCTGAGGTCTAAATGGTCTCCTCTTAATTGTACTTTCGGTCTTCCTAGTGAAAGCCCATTTGTCAAAGGGTGATTGGTTGACATGTGATGAAGGACCAAGTGACACACTTCGTAGACAATGACAAACTACATGTGAATTGCTTGGAGGGATGCTTACTATGATTTTTGGAAAATTTTAATTGATGATGTACATTGTGTATGATTACAGACTTTGGTGAAGATCCAAATGATGAAACTGAAACTTAAGGGTCTTATGTTATGAGAAATGTTATCAAGTGGTGTGTGCACTTGTGATCACCAGTTTTCCTTCAGAATCTCTCATAAGTGTTTTACTTTTGTGGATAAATTTTTTCTGACATTGTTGTTTAGTTTGCTGGTTTAAAGTTGGATTTCTTAGTCAACCATAGGTATGTTTTTTTCTCCAATGAATGTTCTTGTTCCTCATCATTTTTGCTAAAGAATTAAGCATTGTTCTTGAGACAGACCTTCTGCGTCAAGCCCTCAACTAGAAAATTGGAATATATGTTTCTTACCTTTTGTAAATCCTTTGTGAATCTCCCTGACATCATGTGGAACTTACTGGGAAGTGTTAAGGCAATATGTACTTTCTGACAGCTAAGTTCATTTGCATCTATTCTTATCCTCGTTTAGAAACTCCTCGTGTATGTGCAGCATCCTGATAATTAAACATCTTTATCGAAGGTTTCCCGCAATATTATATATTTTGCACCAGTTTTTAGTTGTTCTAGTAACCATATTTCATTGCACTATAATTTATTCAGAAGACTTCAACGACGATCCAGTAAGACAATCCAGTAAAAGCTAGGTGATATTACATTTTTATTTTAATGAGCAGGTGCAATCCCTCTTATGAAACCAACTGGTCTGATATAGTATTATTTAGTTATTGTTCCTATAACCATCTGATTAGATGCTCTTCTACCATAAATAAAGATGGTGGTAGCCTTATGGGAAATTATAAACACCAACTAGGCTGCCTAACTGGGACGTAGAGGATGGCACTGCTATTGGCATTTCATCTAACAATTATAATTTGTTCCATGCAGAGAAAAATCTCTCCGGTGGAAAGTTCGAGGTCGAGGTTTCTTTATTTGGCGTGCATATACATTCCGAAAGTCATGATCTTTGTGAAGAAACTTCTTGTCCTATTAAACCTGGAAAATTCTCCTTATCGCACTCGCAAAGCTTACCTCCATTTACGCCACCAGTAAGTCTTGTTTCGTAGATTAATGCTCTCTCTTTACCAACATGCCATGTTGCTTTACAAGTTTCTTTGATCACCCATCTTTGTTCCCAATTTTATTCTGAATCTTGCTTTGCTAAAGTTGCCTGAATCTTGAAATTTATACTACAGGGTATGTATTCTGTGAAAATAATATTGAAAGATACGGATAAGGAGCAGTTGACTTGCATCAGCTTCAAGCTCAAAATTGTTTTTGGTGACGAGAAATCAGCAATACCTGAAGAATCCTTGGTTGCTGAGAGTTGAAAATTGCCAGTTGAAGTTAATGTTCCTGCGACTTTCTCTGTTTTTCAGCTTCAGTATGTGTAATATTTCGACTACTGCTACTACAAGGATTTGACCCGACTCGTGTTGTTGTTTGTGTGTTTATAAAATCTTCTGGACAAATGCAAGTTCTTCAATATGCTAGCTTTCTTC

mRNA sequence

TTCTATCGCTCGTCGAGGAGTTTTCTTCTTTCTTCATCGTCACCCATTTCCCTTCAGATCGGCCCTTCAACGCCGATCATCCACGAGATCATGGACGGGCGAATGTTCAGTCGCATCCTCTTTCTTCTCTTCGCGGTTCATTTACTCTTGCCGGCCATCTCCGCTGCCAAATTCGACTATTGCGACAAGAGAGGTAATTATCCTGTGAAGGTCGATGGACTTAAAGTATCTCCTTATCCAGTGAAGGGTGGGAAGCCTGCCACGTTTGCCGTTTCAGCCTCTTCTGAGAAAAATCTCTCCGGTGGAAAGTTCGAGGTCGAGGTTTCTTTATTTGGCGTGCATATACATTCCGAAAGTCATGATCTTTGTGAAGAAACTTCTTGTCCTATTAAACCTGGAAAATTCTCCTTATCGCACTCGCAAAGCTTACCTCCATTTACGCCACCAGGTATGTATTCTGTGAAAATAATATTGAAAGATACGGATAAGGAGCAGTTGACTTGCATCAGCTTCAAGCTCAAAATTGTTTTTGGTGACGAGAAATCAGCAATACCTGAAGAATCCTTGGTTGCTGAGAGTTGAAAATTGCCAGTTGAAGTTAATGTTCCTGCGACTTTCTCTGTTTTTCAGCTTCAGTATGTGTAATATTTCGACTACTGCTACTACAAGGATTTGACCCGACTCGTGTTGTTGTTTGTGTGTTTATAAAATCTTCTGGACAAATGCAAGTTCTTCAATATGCTAGCTTTCTTC

Coding sequence (CDS)

ATGGACGGGCGAATGTTCAGTCGCATCCTCTTTCTTCTCTTCGCGGTTCATTTACTCTTGCCGGCCATCTCCGCTGCCAAATTCGACTATTGCGACAAGAGAGGTAATTATCCTGTGAAGGTCGATGGACTTAAAGTATCTCCTTATCCAGTGAAGGGTGGGAAGCCTGCCACGTTTGCCGTTTCAGCCTCTTCTGAGAAAAATCTCTCCGGTGGAAAGTTCGAGGTCGAGGTTTCTTTATTTGGCGTGCATATACATTCCGAAAGTCATGATCTTTGTGAAGAAACTTCTTGTCCTATTAAACCTGGAAAATTCTCCTTATCGCACTCGCAAAGCTTACCTCCATTTACGCCACCAGGTATGTATTCTGTGAAAATAATATTGAAAGATACGGATAAGGAGCAGTTGACTTGCATCAGCTTCAAGCTCAAAATTGTTTTTGGTGACGAGAAATCAGCAATACCTGAAGAATCCTTGGTTGCTGAGAGTTGA

Protein sequence

MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES

Homology

[Close]

BLAST of Carg22700 vs. NCBI nr
Match: KAG7022171.1 (putative phosphatidylglycerol/phosphatidylinositol transfer protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.6 bits (841), Expect = 3.1e-86
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60
           MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA
Sbjct: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60

Query: 61  VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120
           VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG
Sbjct: 61  VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120

Query: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
           MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
Sbjct: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 163

[Close]

BLAST of Carg22700 vs. NCBI nr
Match: XP_023520653.1 (putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 7.0e-86
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60
           MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA
Sbjct: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60

Query: 61  VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120
           VSAS+EKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG
Sbjct: 61  VSASTEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120

Query: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
           MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
Sbjct: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 163

[Close]

BLAST of Carg22700 vs. NCBI nr
Match: KAG6588252.1 (Protein IQ-DOMAIN 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 321.2 bits (822), Expect = 5.0e-84
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60
           MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA
Sbjct: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60

Query: 61  VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120
           VSAS+EKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG
Sbjct: 61  VSASTEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120

Query: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLV 161
           MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESL+
Sbjct: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLL 160

[Close]

BLAST of Carg22700 vs. NCBI nr
Match: XP_023001324.1 (putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucurbita maxima])

HSP 1 Score: 320.5 bits (820), Expect = 8.6e-84
Identity = 158/163 (96.93%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60
           MDGR+FSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA
Sbjct: 1   MDGRIFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60

Query: 61  VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120
           VSAS+EKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG
Sbjct: 61  VSASTEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120

Query: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
           MYSVKIILKD +KEQLTCISFKLKIVFGDEKSAIP+ESLVAES
Sbjct: 121 MYSVKIILKDMEKEQLTCISFKLKIVFGDEKSAIPKESLVAES 163

[Close]

BLAST of Carg22700 vs. NCBI nr
Match: XP_022933704.1 (putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 [Cucurbita moschata])

HSP 1 Score: 319.3 bits (817), Expect = 1.9e-83
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60
           MDGRMFSRILFLLFAVHLLLPAI AAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA
Sbjct: 1   MDGRMFSRILFLLFAVHLLLPAIFAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60

Query: 61  VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120
           VSAS+EKNLSGGKFEVEVSLFGV IHSESHDLCE TSCP+KPGKFSLSHSQSLPPFTPPG
Sbjct: 61  VSASTEKNLSGGKFEVEVSLFGVRIHSESHDLCEATSCPVKPGKFSLSHSQSLPPFTPPG 120

Query: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
           MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
Sbjct: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 163

[Close]

BLAST of Carg22700 vs. ExPASy Swiss-Prot
Match: Q9AST8 (MD-2-related lipid-recognition protein ROSY1 OS=Arabidopsis thaliana OX=3702 GN=ROSY1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.0e-11
Identity = 44/145 (30.34%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 7   SRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSE 66
           +++L LL       PA+   KF  CD    YP+KV  +++SP PVK        ++  + 
Sbjct: 6   TQLLLLLLVSLFFSPALCGPKFQTCDTGKEYPLKVSSVEISPDPVKRSGNGEITITGVTN 65

Query: 67  KNLSGG---KFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMYS 126
           K +S G     ++ V +F V   ++S+ LC+ T+CP+ PG   L+      P        
Sbjct: 66  KEISDGVTVNLKLAVGMFPV--STKSYSLCDITACPVAPGPIVLTLPNIFTPREKRTAIG 125

Query: 127 VKIILKDTD---KEQLTCISFKLKI 146
             II+  TD   KE + CI F +K+
Sbjct: 126 YTIIISITDKPLKESMMCILFVVKL 148

[Close]

BLAST of Carg22700 vs. ExPASy Swiss-Prot
Match: O94183 (Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pltp PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-07
Identity = 37/119 (31.09%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 29  DYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASS---EKNLSGGKFEVEVSLFGVHI 88
           +YC+      + +  + +SP P   GK  T A++AS    EK   G    +EV    + +
Sbjct: 48  EYCNDPSGDILDIKQVDLSPNPPLPGK--TLAITASGTLREKIEDGAYVLLEVKYGLITL 107

Query: 89  HSESHDLCE-----ETSCPIKPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLTCI 140
             ++ DLCE     E  CP+ PG  +L+    LP   PPG Y+V+  + ++D E +TC+
Sbjct: 108 VRQTADLCEQLVNVELKCPLGPGDMTLTKQVDLPKQIPPGKYTVQADVFNSDGEHITCL 164

[Close]

BLAST of Carg22700 vs. ExPASy TrEMBL
Match: A0A6J1KME8 (putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 OS=Cucurbita maxima OX=3661 GN=LOC111495487 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.1e-84
Identity = 158/163 (96.93%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60
           MDGR+FSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA
Sbjct: 1   MDGRIFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60

Query: 61  VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120
           VSAS+EKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG
Sbjct: 61  VSASTEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120

Query: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
           MYSVKIILKD +KEQLTCISFKLKIVFGDEKSAIP+ESLVAES
Sbjct: 121 MYSVKIILKDMEKEQLTCISFKLKIVFGDEKSAIPKESLVAES 163

[Close]

BLAST of Carg22700 vs. ExPASy TrEMBL
Match: A0A6J1F0H6 (putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 OS=Cucurbita moschata OX=3662 GN=LOC111441041 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.2e-84
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 0


Query: 1   MDGRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60
           MDGRMFSRILFLLFAVHLLLPAI AAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA
Sbjct: 1   MDGRMFSRILFLLFAVHLLLPAIFAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFA 60

Query: 61  VSASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPG 120
           VSAS+EKNLSGGKFEVEVSLFGV IHSESHDLCE TSCP+KPGKFSLSHSQSLPPFTPPG
Sbjct: 61  VSASTEKNLSGGKFEVEVSLFGVRIHSESHDLCEATSCPVKPGKFSLSHSQSLPPFTPPG 120

Query: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
           MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES
Sbjct: 121 MYSVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 163

[Close]

BLAST of Carg22700 vs. ExPASy TrEMBL
Match: A0A1S3B808 (putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 OS=Cucumis melo OX=3656 GN=LOC103487184 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.8e-67
Identity = 130/161 (80.75%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 3   GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVS 62
           GR F+RI+FLLF V LL P I AAKF+YCD+RGNYPVKVD L+VSP PVK G+PATF VS
Sbjct: 4   GRSFNRIIFLLFTVLLLFPVIFAAKFEYCDRRGNYPVKVDELEVSPDPVKSGQPATFTVS 63

Query: 63  ASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMY 122
           AS+EKNLSGGKF VEVSLFG+HIHSESHDLCEETSCPI PGKFSLSHSQSLPPFTPPG Y
Sbjct: 64  ASTEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPGKFSLSHSQSLPPFTPPGSY 123

Query: 123 SVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
            VKIIL+D+  +QLTCISFKLKIVFGD +SAI E+SLVAES
Sbjct: 124 VVKIILRDSKNQQLTCISFKLKIVFGDAESAISEKSLVAES 164

[Close]

BLAST of Carg22700 vs. ExPASy TrEMBL
Match: A0A0A0LXM9 (ML domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G641040 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-65
Identity = 128/161 (79.50%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 3   GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVS 62
           GR F+RI+FLLFAV LLLP I AAKF+YCD+RG+YPVKV  L+VSP PVK G+PATF VS
Sbjct: 4   GRSFNRIIFLLFAVLLLLPVIFAAKFEYCDRRGDYPVKVGELEVSPDPVKSGQPATFTVS 63

Query: 63  ASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMY 122
           AS+EKNLSGGKF VEVSLFG+HIHSESHDLCEETSCPI PGKFSLSHSQSLPPFTPPG Y
Sbjct: 64  ASTEKNLSGGKFVVEVSLFGLHIHSESHDLCEETSCPIAPGKFSLSHSQSLPPFTPPGSY 123

Query: 123 SVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
           +VKIIL+D+  +QLTCI+FKLKIVFGD +SAI E+ LVAES
Sbjct: 124 TVKIILRDSKNQQLTCINFKLKIVFGDAESAISEKYLVAES 164

[Close]

BLAST of Carg22700 vs. ExPASy TrEMBL
Match: A0A6J1CKB6 (putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 OS=Momordica charantia OX=3673 GN=LOC111012235 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.8e-63
Identity = 126/161 (78.26%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 3   GRMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVS 62
           G  F RIL L FAVHLL PAI AAKF+YCDKRGNY VKV  L+VSP PVK GKPATF VS
Sbjct: 4   GLSFDRILVLFFAVHLLFPAIFAAKFNYCDKRGNYAVKVAALEVSPDPVKSGKPATFTVS 63

Query: 63  ASSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMY 122
           AS++K LSGGKF VEVSLFG+HIHSE+HDLCE TSCP+ PGKFSL+HSQSLPPFTPPG Y
Sbjct: 64  ASTDKVLSGGKFGVEVSLFGMHIHSEAHDLCEVTSCPVVPGKFSLAHSQSLPPFTPPGSY 123

Query: 123 SVKIILKDTDKEQLTCISFKLKIVFGDEKSAIPEESLVAES 164
           SVKI+LKD    QLTCI+FKLKIVFGD +SAI EESLVAES
Sbjct: 124 SVKILLKDNKNRQLTCINFKLKIVFGDGESAISEESLVAES 164

[Close]

BLAST of Carg22700 vs. TAIR 10
Match: AT3G44100.1 (MD-2-related lipid recognition domain-containing protein )

HSP 1 Score: 148.3 bits (373), Expect = 5.4e-36
Identity = 72/140 (51.43%), Postives = 98/140 (70.00%), Query Frame = 0


Query: 9   ILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKN 68
           +L LL +V   LPA+ A  F YCDKR + PVKV G+K+SP PV  G  ATF +  S+ ++
Sbjct: 9   LLLLLLSV-FFLPALHATSFTYCDKRLD-PVKVTGVKISPDPVVSGAAATFKIFGSTGED 68

Query: 69  LSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMYSVKIIL 128
           +SGGK  + V   G+ +H+E+HDLC+ET+CP+ PG F LSHSQ+LP  TPPG Y++K+ +
Sbjct: 69  ISGGKVVIRVLYVGIPVHTETHDLCDETACPVAPGSFVLSHSQTLPSITPPGTYTLKMTI 128

Query: 129 KDTDKEQLTCISFKLKIVFG 149
            D +  +LTCISFK KI  G
Sbjct: 129 NDKNGGRLTCISFKFKITVG 146

[Close]

BLAST of Carg22700 vs. TAIR 10
Match: AT3G11780.1 (MD-2-related lipid recognition domain-containing protein / ML domain-containing protein )

HSP 1 Score: 147.9 bits (372), Expect = 7.1e-36
Identity = 66/131 (50.38%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 18  LLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVE 77
           L+   ++A    YCD    Y VKV G+ ++PYP+  G+PATF +SA+++  +S GK  +E
Sbjct: 17  LVSTIVAATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTEISSGKLVIE 76

Query: 78  VSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMYSVKIILKDTDKEQLT 137
           VS FG HIHSE+HDLC+ETSCP+  G F ++HSQ LP +TPPG YS+K+ + D  K++LT
Sbjct: 77  VSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPGSYSLKMKMLDGRKKELT 136

Query: 138 CISFKLKIVFG 149
           CI F   I FG
Sbjct: 137 CIKFSFDIGFG 147

[Close]

BLAST of Carg22700 vs. TAIR 10
Match: AT3G11780.2 (MD-2-related lipid recognition domain-containing protein / ML domain-containing protein )

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-32
Identity = 66/149 (44.30%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 18  LLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSEKNLSGGKFEVE 77
           L+   ++A    YCD    Y VKV G+ ++PYP+  G+PATF +SA+++  +S GK  +E
Sbjct: 17  LVSTIVAATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTEISSGKLVIE 76

Query: 78  VSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPP------------------ 137
           VS FG HIHSE+HDLC+ETSCP+  G F ++HSQ LP +TPP                  
Sbjct: 77  VSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPTEKRFNLVSIAYYEFHVE 136

Query: 138 GMYSVKIILKDTDKEQLTCISFKLKIVFG 149
           G YS+K+ + D  K++LTCI F   I FG
Sbjct: 137 GSYSLKMKMLDGRKKELTCIKFSFDIGFG 165

[Close]

BLAST of Carg22700 vs. TAIR 10
Match: AT5G06480.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-32
Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 0


Query: 4   RMFSRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSA 63
           R+F+ +      + LL+  I A    YC++   Y VKV  + +SP P+  G+PATF +SA
Sbjct: 3   RIFAILPLAAVFLLLLVSPIVAIDVHYCEENAEYEVKVKEVDISPNPIAPGEPATFTISA 62

Query: 64  SSEKNLSGGKFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMYS 123
           ++ + +S GK  +EVS FG H+HSE+HDLC ETSCPI+ G F ++HSQ LP +TPPG Y 
Sbjct: 63  NTGREISFGKLVIEVSYFGWHVHSETHDLCTETSCPIQTGDFLVAHSQVLPGYTPPGSYL 122

Query: 124 VKIILKDTDKEQLTCISFKLKI 146
           +K+ + D  K++LTCI F   I
Sbjct: 123 LKMKMLDAKKKELTCIKFSFDI 144

[Close]

BLAST of Carg22700 vs. TAIR 10
Match: AT2G16005.1 (MD-2-related lipid recognition domain-containing protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 44/145 (30.34%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 7   SRILFLLFAVHLLLPAISAAKFDYCDKRGNYPVKVDGLKVSPYPVKGGKPATFAVSASSE 66
           +++L LL       PA+   KF  CD    YP+KV  +++SP PVK        ++  + 
Sbjct: 6   TQLLLLLLVSLFFSPALCGPKFQTCDTGKEYPLKVSSVEISPDPVKRSGNGEITITGVTN 65

Query: 67  KNLSGG---KFEVEVSLFGVHIHSESHDLCEETSCPIKPGKFSLSHSQSLPPFTPPGMYS 126
           K +S G     ++ V +F V   ++S+ LC+ T+CP+ PG   L+      P        
Sbjct: 66  KEISDGVTVNLKLAVGMFPV--STKSYSLCDITACPVAPGPIVLTLPNIFTPREKRTAIG 125

Query: 127 VKIILKDTD---KEQLTCISFKLKI 146
             II+  TD   KE + CI F +K+
Sbjct: 126 YTIIISITDKPLKESMMCILFVVKL 148

The following BLAST results are available for this feature:

BLAST of Carg22700 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022171.1	3.1e-86	100.00	putative phosphatidylglycerol/phosphatidylinositol transfer protein [Cucurbita a...	[more]
XP_023520653.1	7.0e-86	99.39	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179...	[more]
KAG6588252.1	5.0e-84	98.75	Protein IQ-DOMAIN 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023001324.1	8.6e-84	96.93	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179...	[more]
XP_022933704.1	1.9e-83	96.93	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179...	[more]

BLAST of Carg22700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AST8	2.0e-11	30.34	MD-2-related lipid-recognition protein ROSY1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O94183	2.3e-07	31.09	Phosphatidylglycerol/phosphatidylinositol transfer protein OS=Aspergillus oryzae...	[more]

BLAST of Carg22700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KME8	4.1e-84	96.93	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179...	[more]
A0A6J1F0H6	9.2e-84	96.93	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179...	[more]
A0A1S3B808	7.8e-67	80.75	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179...	[more]
A0A0A0LXM9	1.1e-65	79.50	ML domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G641040 PE=4 SV=...	[more]
A0A6J1CKB6	1.8e-63	78.26	putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179...	[more]

BLAST of Carg22700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44100.1	5.4e-36	51.43	MD-2-related lipid recognition domain-containing protein	[more]
AT3G11780.1	7.1e-36	50.38	MD-2-related lipid recognition domain-containing protein / ML domain-containing ...	[more]
AT3G11780.2	1.6e-32	44.30	MD-2-related lipid recognition domain-containing protein / ML domain-containing ...	[more]
AT5G06480.1	1.6e-32	45.77	Immunoglobulin E-set superfamily protein	[more]
AT2G16005.1	1.4e-12	30.34	MD-2-related lipid recognition domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003172	MD-2-related lipid-recognition domain	SMART	SM00737	pgtp_13	coord: 28..143 e-value: 7.3E-32 score: 121.8
IPR003172	MD-2-related lipid-recognition domain	PFAM	PF02221	E1_DerP2_DerF2	coord: 27..145 e-value: 4.2E-23 score: 82.2
None	No IPR available	GENE3D	2.60.40.770		coord: 26..147 e-value: 1.5E-17 score: 66.1
None	No IPR available	PANTHER	PTHR11306:SF34	PHOSPHATIDYLGLYCEROL/PHOSPHATIDYLINOSITOL TRANSFER PROTEIN DDB_G0282179 ISOFORM X1-RELATED	coord: 1..153
IPR039670	Sterol transport protein NPC2-like	PANTHER	PTHR11306	NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED	coord: 1..153
IPR033917	ML domain, phosphatidylinositol/phosphatidylglycerol transfer protein	CDD	cd00917	PG-PI_TP	coord: 28..142 e-value: 1.02664E-39 score: 128.597
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 25..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22700-RA	Carg22700-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032366	intracellular sterol transport
molecular_function	GO:0032934	sterol binding