Carg22685 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg22685
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionChlorophyll a-b binding protein, chloroplastic
LocationCarg_Chr11: 4703072 .. 4704880 (-)
RNA-Seq ExpressionCarg22685
SyntenyCarg22685
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTCAGGCTCTTGTTTCATCCTCGTCTCTAACCTCTTCAGTGGGCGCTGCCAGACAGCGATTAGGACCAAAGCCCTCCCTTGGTTCCTCCAGAAAGGCCGCTTCTTTCGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGGTAATTCCTTACCCCATTTGGTTCTTTCTTACCTAAACTCCCTCAATAAGATATCAATTACTTGTTCTTATTCGTCCCAGTTGGCTTAGTTGTGATCTAATGTTTGTTATCGTTGCAGCAAGGAGCTAACAGACAATTATGGTTCGCTTCTAAACAAAGTCTTACATATTTGGATGGAAGGTATATATCTTTATTAAAAAGTTGTTCCGAAAGAATCTTTAATTTATGTGTGAGTTAATAAGCTTGACTTAGTAAAACAAGTTCTTGACTTTGGAATAACTTTACGTTAATTGTTAGTCTTTCTAGAAAATTTAGGAAATTTGTTAACGTCTTCTCTGGCATAAATACTCATGAGATGTATGCTCCTTTTCACACCAACCGAGAGAATAAATGCTTAAGATTTCTTTGTTTTAGAAGATCTCTCCCCTCGTATTTTATTGTTTTATTTGTTTCGACATATTTGGATCGGGGTCATATCCAACATTATTGTCTCTTATTCTTAGAAACATGATAAACGAGTGTCTTAAATTGTAAAAGCTTCACCGGGTATGCAACTAAGTCATGTGATTTAAATTACTTGGTTTGATTGATAGTCTTTCGGGCGATTAAGGATTTGATCCATTGGGACTATCAGACCCTGTTCTTTTTGTTCTTTTATTTGTTTCGACATATTTCAATCATGGGTCATATCCAACATTCATGTCTCCTATTCTCAGAAACATGACAAACGAGTATCTTAAATTGTAAAAGCTTCACGAGTATCTTAAATTGTAAAAGCTTCACGGGATCTAAAACTAAGTCAGGTGATTTGAATGACTTGATTTGATTGATAGTCTTCCGGGCGATTAAGGATTTGATCCATTGGGACTATCAGACCTTGATTTTTTTGTTCTTTTATTTGTTTCGACATATTTGGATCATGGGTCATATCCAACATTCATGTCTCCTGTTCTCAGAAACATGACAAATGAGTGTCTTAAATGGTAAAAGCTTCCTAGGACATGAGACTAAGTCGTGTGATTTGAATTACTTGTTTTGATTGATAGTCTTCCGGGCGATTACGGGTTCGATCCATTGGGACTATCAGACCCCGAGGGCACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTTGCGATGTTAGGAGCCGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGTTTTGCTGAACACAGAAGATTTCAAGATTGGTACAACCCAGGATCCATGGGAAAGCAATACTTCTTAGGGTTAGAGAAGTTCTTGGGTGGGTCAGGTGACCCTGCTTACCCAGGTGGCCCCTTGTTCAACCCTTTAGGGTTTGGAAAAGATGAGAAATCAATGAAGGAATTGAAGCTGAAGGAGATCAAGAATGGGAGGCTTGCAATGTTGGCTATCTTGGGTTACTTCATACAAGGCCTTGTCACTGGTGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTGTCAACAACAACGTTTTGACAAGCCTTAAGTTCCACTAG

mRNA sequence

ATGGCCACTCAGGCTCTTGTTTCATCCTCGTCTCTAACCTCTTCAGTGGGCGCTGCCAGACAGCGATTAGGACCAAAGCCCTCCCTTGGTTCCTCCAGAAAGGCCGCTTCTTTCGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCTAACAGACAATTATGGTTCGCTTCTAAACAAAGTCTTACATATTTGGATGGAAGTCTTCCGGGCGATTACGGGTTCGATCCATTGGGACTATCAGACCCCGAGGGCACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTTGCGATGTTAGGAGCCGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGTTTTGCTGAACACAGAAGATTTCAAGATTGGTACAACCCAGGATCCATGGGAAAGCAATACTTCTTAGGGTTAGAGAAGTTCTTGGGTGGGTCAGGTGACCCTGCTTACCCAGGTGGCCCCTTGTTCAACCCTTTAGGGTTTGGAAAAGATGAGAAATCAATGAAGGAATTGAAGCTGAAGGAGATCAAGAATGGGAGGCTTGCAATGTTGGCTATCTTGGGTTACTTCATACAAGGCCTTGTCACTGGTGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTGTCAACAACAACGTTTTGACAAGCCTTAAGTTCCACTAG

Coding sequence (CDS)

ATGGCCACTCAGGCTCTTGTTTCATCCTCGTCTCTAACCTCTTCAGTGGGCGCTGCCAGACAGCGATTAGGACCAAAGCCCTCCCTTGGTTCCTCCAGAAAGGCCGCTTCTTTCGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCTAACAGACAATTATGGTTCGCTTCTAAACAAAGTCTTACATATTTGGATGGAAGTCTTCCGGGCGATTACGGGTTCGATCCATTGGGACTATCAGACCCCGAGGGCACAGGAGGGTTCATCGAGCCGAGATGGTTGGCATACGGCGAGGTGATCAACGGGAGGTTTGCGATGTTAGGAGCCGCAGGAGCCATTGCCCCAGAGATCTTTGGATCACTAGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCAGACCCCTACACACTGTTTGTGTTTGAGATGGCTCTAATGGGTTTTGCTGAACACAGAAGATTTCAAGATTGGTACAACCCAGGATCCATGGGAAAGCAATACTTCTTAGGGTTAGAGAAGTTCTTGGGTGGGTCAGGTGACCCTGCTTACCCAGGTGGCCCCTTGTTCAACCCTTTAGGGTTTGGAAAAGATGAGAAATCAATGAAGGAATTGAAGCTGAAGGAGATCAAGAATGGGAGGCTTGCAATGTTGGCTATCTTGGGTTACTTCATACAAGGCCTTGTCACTGGTGTTGGCCCTTACCAAAACCTTTTGGACCATTTGTCTGACCCTGTCAACAACAACGTTTTGACAAGCCTTAAGTTCCACTAG

Protein sequence

MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Homology
[Close]
BLAST of Carg22685 vs. NCBI nr
Match: XP_022933380.1 (chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata] >KAG6588241.1 Chlorophyll a-b binding protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022157.1 Chlorophyll a-b binding protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558.9 bits (1439), Expect = 2.4e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS
Sbjct: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]
BLAST of Carg22685 vs. NCBI nr
Match: XP_023006167.1 (chlorophyll a-b binding protein 8, chloroplastic [Cucurbita maxima] >XP_023531157.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 555.4 bits (1430), Expect = 2.7e-154
Identity = 272/274 (99.27%), Postives = 273/274 (99.64%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS
Sbjct: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWYNPGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]
BLAST of Carg22685 vs. NCBI nr
Match: XP_038879830.1 (photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida])

HSP 1 Score: 536.2 bits (1380), Expect = 1.7e-148
Identity = 263/274 (95.99%), Postives = 269/274 (98.18%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALV SSSLTSSVGAARQRLG KPS GSSRKAASFVVRAEATPPVKQGA+RQLWFAS
Sbjct: 1   MATQALV-SSSLTSSVGAARQRLGAKPSFGSSRKAASFVVRAEATPPVKQGADRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKS+K+LKLKE+KNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           F+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]
BLAST of Carg22685 vs. NCBI nr
Match: XP_004139075.1 (chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus] >KGN66578.1 hypothetical protein Csa_006962 [Cucumis sativus])

HSP 1 Score: 535.4 bits (1378), Expect = 2.8e-148
Identity = 264/274 (96.35%), Postives = 269/274 (98.18%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALV SSSLTSSVGAARQRLG +PS GSSRK+ASFVVRAEATPPVKQGA+RQLWFAS
Sbjct: 1   MATQALV-SSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]
BLAST of Carg22685 vs. NCBI nr
Match: XP_008450298.1 (PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo] >TYK28122.1 chlorophyll a-b binding protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 531.6 bits (1368), Expect = 4.1e-147
Identity = 262/274 (95.62%), Postives = 267/274 (97.45%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALV SSSLTSSVGAARQRLG KPS GSSRK+ASFVVRA ATPPVKQGA+RQLWFAS
Sbjct: 1   MATQALV-SSSLTSSVGAARQRLGAKPSFGSSRKSASFVVRAGATPPVKQGADRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLTYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW  PGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273

[Close]
BLAST of Carg22685 vs. ExPASy Swiss-Prot
Match: Q9SY97 (Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA3 PE=1 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 9.9e-136
Identity = 238/274 (86.86%), Postives = 249/274 (90.88%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MA QALV SSSLTSSV  ARQ  G KP   +S+K +SFVV+A ATPPVKQGANR LWFAS
Sbjct: 1   MAAQALV-SSSLTSSVQTARQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
            QSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLGAAGAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
            G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDWYNPGS
Sbjct: 121 LGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]
BLAST of Carg22685 vs. ExPASy Swiss-Prot
Match: P27522 (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB8 PE=3 SV=1)

HSP 1 Score: 483.0 bits (1242), Expect = 2.2e-135
Identity = 239/274 (87.23%), Postives = 252/274 (91.97%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQAL+SSSS+++S  AARQ +G + S   +RK ASFVVRA +TPPVKQGANRQLWFAS
Sbjct: 1   MATQALISSSSISTSAEAARQIIGSRISQSVTRK-ASFVVRAASTPPVKQGANRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSL+YLDG LPGD+GFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
            G  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDW  PGS
Sbjct: 121 LGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEK LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQ LVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 FIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]
BLAST of Carg22685 vs. ExPASy Swiss-Prot
Match: Q32904 (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum OX=3888 GN=lhca3 PE=1 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 4.4e-128
Identity = 231/278 (83.09%), Postives = 244/278 (87.77%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPK---PSLGSSRKAASFVVRAEATPPVKQ-GANRQL 60
           MATQALVSSSSLT +  A RQ    +    S+G SRK    +VRA ATPPVKQ G +R L
Sbjct: 1   MATQALVSSSSLTFAAEAVRQSFRARSLPSSVGCSRKG---LVRAAATPPVKQGGVDRPL 60

Query: 61  WFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAI 120
           WFASKQSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGA GAI
Sbjct: 61  WFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAI 120

Query: 121 APEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWY 180
           APE  G +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAEHRRFQDW 
Sbjct: 121 APEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWA 180

Query: 181 NPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLA 240
            PGSMGKQYFLGLEK  GGSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLA
Sbjct: 181 KPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLA 240

Query: 241 ILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           ILGYFIQGLVTGVGPYQNLLDH++DPVNNNVLTSLKFH
Sbjct: 241 ILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH 275

[Close]
BLAST of Carg22685 vs. ExPASy Swiss-Prot
Match: Q9C639 (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA5 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 5.2e-44
Identity = 98/222 (44.14%), Postives = 136/222 (61.26%), Query Frame = 0 

Query: 54  RQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA 113
           R  W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ RFAMLG 
Sbjct: 46  RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESL------KWYVQAELVHSRFAMLGV 105

Query: 114 AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRR 173
           AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R
Sbjct: 106 AGILFTDLLRTTGI----RNLPVWYEAGAV----KFDF-ASTKTLIVVQFLLMGFAETKR 165

Query: 174 FQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKN 233
           + D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKEIKN
Sbjct: 166 YMDFVSPGSQAKEGSFFFGLEAALEGL-EPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKN 225

Query: 234 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL 272
           GRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  ++ +L
Sbjct: 226 GRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]
BLAST of Carg22685 vs. ExPASy Swiss-Prot
Match: P13869 (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 7.0e-41
Identity = 107/257 (41.63%), Postives = 139/257 (54.09%), Query Frame = 0 

Query: 8   SSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFASKQSLTYL 67
           SS    S VGA +        L  S+  A    R+ A   V    +R LWF       +L
Sbjct: 19  SSQKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWL 78

Query: 68  DGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGL 127
           DGSLPGD+GFDPLGL SDPE        +W A  E+++ R+AMLGAAG   PE    +G+
Sbjct: 79  DGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV 138

Query: 128 IPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGSMGKQYF 187
           +   +   W+       AG   Y+ D  TLFV E+ L+G+AE RR+ D   PG +     
Sbjct: 139 LNTPS---WY------TAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPI 198

Query: 188 LGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKS-MKELKLKEIKNGRLAMLAILGYFIQGL 247
               K  G   D  YPGG  F+PLG+G    + +KEL+ KEIKNGRLAMLA++G + Q +
Sbjct: 199 FPNNKLTG--TDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHI 258

Query: 248 VTGVGPYQNLLDHLSDP 263
            TG GP  NL  HL+DP
Sbjct: 259 YTGTGPIDNLFAHLADP 258

[Close]
BLAST of Carg22685 vs. ExPASy TrEMBL
Match: A0A6J1F4Q9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111440812 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.2e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS
Sbjct: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]
BLAST of Carg22685 vs. ExPASy TrEMBL
Match: A0A6J1KV56 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498983 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.3e-154
Identity = 272/274 (99.27%), Postives = 273/274 (99.64%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS
Sbjct: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDWYNPGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]
BLAST of Carg22685 vs. ExPASy TrEMBL
Match: A0A0A0LXV0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G630330 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.4e-148
Identity = 264/274 (96.35%), Postives = 269/274 (98.18%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALV SSSLTSSVGAARQRLG +PS GSSRK+ASFVVRAEATPPVKQGA+RQLWFAS
Sbjct: 1   MATQALV-SSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSL+YLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDW  PGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]
BLAST of Carg22685 vs. ExPASy TrEMBL
Match: A0A5D3DX73 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00280 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 262/274 (95.62%), Postives = 267/274 (97.45%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALV SSSLTSSVGAARQRLG KPS GSSRK+ASFVVRA ATPPVKQGA+RQLWFAS
Sbjct: 1   MATQALV-SSSLTSSVGAARQRLGAKPSFGSSRKSASFVVRAGATPPVKQGADRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLTYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW  PGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273

[Close]
BLAST of Carg22685 vs. ExPASy TrEMBL
Match: A0A1S3BPK7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491949 PE=3 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.0e-147
Identity = 262/274 (95.62%), Postives = 267/274 (97.45%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MATQALV SSSLTSSVGAARQRLG KPS GSSRK+ASFVVRA ATPPVKQGA+RQLWFAS
Sbjct: 1   MATQALV-SSSLTSSVGAARQRLGAKPSFGSSRKSASFVVRAGATPPVKQGADRQLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
           KQSLTYLDGSLPGD+GFDPLGLSDPEGTGGFIEP+WLAYGEVINGRFAMLGAAGAIAPEI
Sbjct: 61  KQSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
           FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAEHRRFQDW  PGS
Sbjct: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAEHRRFQDWAKPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273

[Close]
BLAST of Carg22685 vs. TAIR 10
Match: AT1G61520.1 (photosystem I light harvesting complex gene 3 )

HSP 1 Score: 484.2 bits (1245), Expect = 7.0e-137
Identity = 238/274 (86.86%), Postives = 249/274 (90.88%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MA QALV SSSLTSSV  ARQ  G KP   +S+K +SFVV+A ATPPVKQGANR LWFAS
Sbjct: 1   MAAQALV-SSSLTSSVQTARQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
            QSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLGAAGAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
            G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDWYNPGS
Sbjct: 121 LGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]
BLAST of Carg22685 vs. TAIR 10
Match: AT1G61520.3 (photosystem I light harvesting complex gene 3 )

HSP 1 Score: 484.2 bits (1245), Expect = 7.0e-137
Identity = 238/274 (86.86%), Postives = 249/274 (90.88%), Query Frame = 0 

Query: 1   MATQALVSSSSLTSSVGAARQRLGPKPSLGSSRKAASFVVRAEATPPVKQGANRQLWFAS 60
           MA QALV SSSLTSSV  ARQ  G KP   +S+K +SFVV+A ATPPVKQGANR LWFAS
Sbjct: 1   MAAQALV-SSSLTSSVQTARQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFAS 60

Query: 61  KQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEI 120
            QSL+YLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLGAAGAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 FGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWYNPGS 180
            G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QDWYNPGS
Sbjct: 121 LGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGY 240
           MGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           FIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]
BLAST of Carg22685 vs. TAIR 10
Match: AT1G61520.2 (photosystem I light harvesting complex gene 3 )

HSP 1 Score: 401.7 bits (1031), Expect = 4.6e-112
Identity = 191/220 (86.82%), Postives = 199/220 (90.45%), Query Frame = 0 

Query: 55  QLWFASKQSLTYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAG 114
           ++W  S  S      SLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGE+INGRFAMLGAAG
Sbjct: 4   KIWRCSDSSC-----SLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAG 63

Query: 115 AIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQD 174
           AIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAEHRR QD
Sbjct: 64  AIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQD 123

Query: 175 WYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAM 234
           WYNPGSMGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+KNGRLAM
Sbjct: 124 WYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAM 183

Query: 235 LAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 275
           LAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 184 LAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 218

[Close]
BLAST of Carg22685 vs. TAIR 10
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-45
Identity = 98/222 (44.14%), Postives = 136/222 (61.26%), Query Frame = 0 

Query: 54  RQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA 113
           R  W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ RFAMLG 
Sbjct: 46  RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESL------KWYVQAELVHSRFAMLGV 105

Query: 114 AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRR 173
           AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R
Sbjct: 106 AGILFTDLLRTTGI----RNLPVWYEAGAV----KFDF-ASTKTLIVVQFLLMGFAETKR 165

Query: 174 FQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKN 233
           + D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKEIKN
Sbjct: 166 YMDFVSPGSQAKEGSFFFGLEAALEGL-EPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKN 225

Query: 234 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL 272
           GRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  ++ +L
Sbjct: 226 GRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]
BLAST of Carg22685 vs. TAIR 10
Match: AT1G45474.2 (photosystem I light harvesting complex gene 5 )

HSP 1 Score: 179.5 bits (454), Expect = 3.7e-45
Identity = 98/222 (44.14%), Postives = 136/222 (61.26%), Query Frame = 0 

Query: 54  RQLWFASKQSLTYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPRWLAYGEVINGRFAMLGA 113
           R  W        YLDG+L GDYGFDPLGL  DPE        +W    E+++ RFAMLG 
Sbjct: 46  RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESL------KWYVQAELVHSRFAMLGV 105

Query: 114 AGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRR 173
           AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFAE +R
Sbjct: 106 AGILFTDLLRTTGI----RNLPVWYEAGAV----KFDF-ASTKTLIVVQFLLMGFAETKR 165

Query: 174 FQDWYNPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKN 233
           + D+ +PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLKEIKN
Sbjct: 166 YMDFVSPGSQAKEGSFFFGLEAALEGL-EPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKN 225

Query: 234 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL 272
           GRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  ++ +L
Sbjct: 226 GRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

The following BLAST results are available for this feature:
BLAST of Carg22685 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933380.12.4e-155100.00chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata] >KAG658824... [more]
XP_023006167.12.7e-15499.27chlorophyll a-b binding protein 8, chloroplastic [Cucurbita maxima] >XP_02353115... [more]
XP_038879830.11.7e-14895.99photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hisp... [more]
XP_004139075.12.8e-14896.35chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus] >KGN66578.1 h... [more]
XP_008450298.14.1e-14795.62PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo] >TYK2... [more]
BLAST of Carg22685 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SY979.9e-13686.86Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic OS=Arabidopsis ... [more]
P275222.2e-13587.23Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum OX=4081... [more]
Q329044.4e-12883.09Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum OX=3888 GN=lhc... [more]
Q9C6395.2e-4444.14Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis th... [more]
P138697.0e-4141.63Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida OX=4102 PE=2 S... [more]
BLAST of Carg22685 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F4Q91.2e-155100.00Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1KV561.3e-15499.27Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A0A0LXV01.4e-14896.35Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa... [more]
A0A5D3DX732.0e-14795.62Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S3BPK72.0e-14795.62Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
BLAST of Carg22685 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G61520.17.0e-13786.86photosystem I light harvesting complex gene 3 [more]
AT1G61520.37.0e-13786.86photosystem I light harvesting complex gene 3 [more]
AT1G61520.24.6e-11286.82photosystem I light harvesting complex gene 3 [more]
AT1G45474.13.7e-4544.14photosystem I light harvesting complex gene 5 [more]
AT1G45474.23.7e-4544.14photosystem I light harvesting complex gene 5 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 55..273
e-value: 8.9E-66
score: 223.6
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 65..243
e-value: 2.2E-46
score: 158.4
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..273
NoneNo IPR availablePANTHERPTHR21649:SF120CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 1..273
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 53..270

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22685-RACarg22685-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009416 response to light stimulus
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0046872 metal ion binding