Carg22656 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22656
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	TATA box-binding protein-associated factor RNA polymerase I subunit B
Location	Carg_Chr12: 8895967 .. 8901200 (-)
RNA-Seq Expression	Carg22656
Synteny	Carg22656

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTCTTTGATTTGGTTGCTAATCTTCTCTGATTACTTGCTTCCATTATTATACCTTCAAGATCTCCAATGGCAGACCCCCGCAACTTGTCTTGCTACAACTGCGGCAGCGTTGGGCTTACAGACGGTGGCGATGGCTTCTTCTACTGTCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGTGTCGCCGATGAGGATTTGATTTTAAGAGACCCTGGTGATGCCGGTGGCCCAATCTACTCGCAATCCCACACGCGCCGTCGTAATCCGGCGGTGTTGAAGGTAGAGCCTCTATCTCAGTCTCAACCACAGAGCCTTTTCGGTACTAGTCAATCTGAGTTCTGGGAGAGCCTTCAATTAGAGGGAGACAACGATATGCAAAGGGATGATACCATTGTGATGTCCAATGATGGTGTTGGGCCGATTGGTCCTGAGGATTTCGGATCGGGTGGTGCTTTATCCGGAGCTCCGAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGATATGTAATGGGATTGCAGTTGATGATGGAGCTTCAGTGCGAAGTTTTGGTGAAGGAATTCAATGCAAGCCCTGTAATCTGTGGATTGGCGGCGAGCATTTGGTTGAGGTTTGTGACTTCTACACAGGTTTTTGACGAGGATTGGGCCTTTGAGGCCGTTCAGGATTCTGAGAGCCAATGCCTAGGTTTGATCACTCATTACTTCCATGAATAGTTCTTATTCAAATTTAAGTGCCTATGAATCATGTTGATAGAACTGAAACCATTAGCTTTAGATTTCCAATTGGCATATATTCGTGGATTCTGATAAATGCCTTGAAAACTTAACTCATTATTGTTATTACATTGTCTTTTGTGGACTTCGATCTTGTTTGCATATTCAAATATCGTAGTTCTAAGTGCATATAGCCATAAGTTCATCCGATTATTACAAAGATGAACCTAATCTAGAATATGAACCTGATCTAGAATATGAACCATAAAAGAAAATACCGACTAAACCGATCACAGGAATACCTATTATCCAAAGAGGAATCCTTCCAGTAGTCTCGGTCATTTGTCCAACTTCCCTCCCCTCCTCAGTCTTTATAATGGGGCATGATTTTGTTTAAGATCTTACAATTTTGCTTGAATAATTGCCTTATTTGTTCCTTTACGTAGTGTTGGTTGAGTTTTCTTCATATATTTCAGTATGTTTGATTGTTTTAATTGGGTCTCTTAGTTTATTTGTACTTGTTGTCATCTTTCTTTTTCGATTTTAGTTGCAAACTGAATGTTCCTTCATTCAACAGATCCTGAAAACATTAGACCTGTTTCAAGTAGGCATAAAGATGAACCCCACAATTTGTATGGTCAGCGGGTAGTAGTTGTGTGGGTTCAATCTTTAAGAAAAAAGATACCATTATCTTGTACTCTAGCTGTTTCCTTTTTGGCTTGCCATGTTGCTCGAGAAGCGATTTTGCCAACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTGTTGACATTGGAGATCGCATTGGGCAAACGTCAAGGGCTTGTCCTATAAGTTTAAAGCATATGTATAGGCCCTCTCGAATTCCCTCGCTGCAGAAGTTGGAATCATTGGCAGCATCGGTAGCTCATACCATAGGGCTAAACCTACCTCCAGTCAACTTTCATTCAATAGCGTGTCGTTATCTCAACAAGCTGGCCCTTCCTATTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTGTGGTTATCAACCAATGAGCTGAGGCTTCCCTCACGTGTTTGTGTAATGTCGATTCTAATTATAGCCATGAGAATTCTCTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCCGGTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGAAACATTCAAGTCCTGCTAATAATTTCAGTAACGTGCAGGCTAATAGTGAAAATGGACCTGGATTTACTTCACATAATGTGGATAATCCGTCTGTCTCGGCTAAATTATCGCATCTTGACATGCCTGAACTGACTGCTTCAGAGTTCCTTCACAAGATTGAAGCTCGGTATCACGAGATTGCTGAGACTTATGGTATGATTTTAGTTTTATTGTATTTTTGAAGTTAGGCCAACCAGAAGCTTTTTCCTACCTGCTCACTGTATTTATTACTAAATTGTTATTTGCTAACACCAAAATTTTGTTGGCAGAATACTCTAAAAGCTTACCGACCTATCTTCAGCACTGTAAGGATGTCGTCTTTGCTGGTTTAGAGTCTTTGTTTGAGGATCACGAGGAAGAACGGTTGATTGAACAATTTTGGAAGTATTATCAGAATGAAAAGGTAGTGGCTATCATGCTGAAGTCTGGCATTTTTCTTTTCTCTTGAGAATCAAATTCAATTTCGCTGATGATTGTGATTTTTGTGAAATATATAATGAATTTCTTTTGCTTTTTCTTTCCTTTTTCACTAGGATGGGATTTTGATCTTTAGGGTATATAGTGAGAAAACGAACAAAGAAGGGAAAGAGGAGACTAGCCGGGATGTTTTATACTAATGAGGCTATCTCGAATCACTGGATGAGGCCTTTTTTTTTTTTTTTTTTTATCGCTCTTACTTATTATCGTGAACCAACCGGTTACTGATAGAGGCTTCTTAGCTAAATTCTTATAGCCTAGGAGTGATTCCGAAAACTAATGTTCGTCCTATTACTCATCTTAGGGTTAAATACTCTTAGCAAACTTTTAGGAGTCATGTGGTGTTGAGACTTTGGTATTTGCAAGTGAACCAACCCCCTTTTTCAACCCCATAAAGACTTGAAAAGCCTGAATGGCACATGTAATCTTTCTCTAGAGAAGAACTCCCTTTTATTACTCTTAGTTGCTATCGTGACACTTTGGGTAGGATTAGCCAAGTATATCATTTCGTCCCTAAAGAAACACCTTCAAGAATTGTGGTTCTTATGGGCGTTGGGGCATTGGTTTGTGGTAAGCCTAGAGATTTGAGTGGGAGGATGTAGAAAGCGTAGATTTGATTAACCTGAGTTGAGTTTGCGGTGCAAGTTTAGGAAGCTTGTTCTTGGGGTGAGAGGAATAATAGATTCTTTCTGGGGGATACATGAATTCATGCCACTCAAACCCAAACCCTCACCTGAAATATGCTCTTAATGTTTTAAAAGTTCTAGTTCTAATTAGCATTTAAACGGTAGTTAAAAATGAATTGATGTTTCTTTATGATGGAGGTAAGAAATTCAATTCTGAAATATGCTCTTAATGGCTTAAAGCCCACCTGCGAGTAGAAATTGTCTTCTTTGGACTTTCTCTTTCGGATTTTCCCTCAAGGTTTTTAAAATGTGTCTGTCATGGAAAGGTTTTCACACCCTTATAAAGAATGTTTCATTCTCCTCTCCAATCAATGTAGGATCTCACAATTCACCACCCCCTTTGTGTCCTCGCTGGCACTCGTTCCTTTCTCCAATCAATGTGGAACCCTACAATTCGTCCCTCTTCAGGGTCCAGCGTCCTCGCTGGCACTCGTTCCATTCTCCAATCGATGTGGGACCCCCCAATCCACCACCTCCCTTCAGGACACAGCATCCTTGCTGGCACATCGTCAGGTGTCTGGCTCTGATATCATTTGTAACAGCCCAAGCCCACCGCTAGTAGATATTGTCCTATTTGGGATCTCCTTTCGAGCTTCCCCTCAAGGTTTCTAAAACGCTCTGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCGTTCTCCTCTCTAACCGACGTGGGATCTCACATTATAACTTGGTCATTTTTCTTCACGATGTTCTTCTTTGGAATGAGTCAAAGGTTGCTGCTCAATGTAGAGTTCTTATGAGAAAATTGTGACTTAGCTCTAATCTAACTTTGCATTCGCACCTTCATTTTGATGTTTAAACTTGAGTTTGAGAAGTAAGATGTAGAAGTGTTGCTAGACTTGAGCTACAATAGGTTATCCAAGTAGATCATGAGTTCAAACTTTATAGCAACCTAAGATATTTATCCTACGAGTCTTCCGACGACTAAACATTATAGGGGTCGAGCAATTGTCTCCTGAAATTCATGAATGCGTGCATAAGTATCGGAAAAAGTCGAGTTAGAACTTATAGTTCTTTGCAACATCACTTGCTTTTGTTGCTATGCCACATGGGATTTCATGTCTGTTAACCAAATTTATGTATCAGTGTTTATTTGGAAAGCATAAATCCTAACCACTGAAAAGAAATTGTTACAGGATCAAGAACAAACAGAAGATATGGATCAAAATGCAGCTTCCAATCAAAAGAGATTGAGGGAAGCTCCGAATGATCGATCATCCAACAAAGACAAGAAACGCAGGAGCGAAGACCGTGTTAGTGGCGAATCATCCGATAACCGAACTGAGTCGAATAATTCTCAGCAAAGTCATTCATCAAAAAGTTCCGAAAATGTAGATGATGAACTATCCTCTGAAGACAAAGCTTCAACACTAACTTCCAAAGACGAAGCGATCAGACGACTGAAACTCGATATGGAAGAAAATAGATTCTGCTACATTCCTCCAAGGGTTTACCCAAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGACGAAGGTGCGCTAACTTACGCTGCTCATGCCGATTACTACTTATTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTAGTACTAGGATCATGCACATTGGTGTGCTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAATCTAGAATCAATCACTCCCTTCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATGTTATGCCTGATCATGCCACGCTCGACTCTATCGATCTCTCAGATTTGAATATTTAAGTGATCAGAGATATATTCGAACGAGTTAAACGATAGATTATATAACAATGTTGGTTCTTATGATCGTATGGAATAAGATTATCAATTGTCAGGTTCAAGATCGTGTAGAAATAAGACACGATCAGAATTTACAACAAAGCCATTGTAGGGTCGGAGCATGTTGAATCTAGAAGTGGTTACCAACGGAATTTATAAGGGTATTCTGTCGAGTGGGGAAGTAGGGTCTTGTGTCAAGTGGATAACTCTTCTAGATAATAATGAACGGTTATCATTGAAGGTTTTTTTCGTTCTTTTAAAAGA

mRNA sequence

TTGTCTTTGATTTGGTTGCTAATCTTCTCTGATTACTTGCTTCCATTATTATACCTTCAAGATCTCCAATGGCAGACCCCCGCAACTTGTCTTGCTACAACTGCGGCAGCGTTGGGCTTACAGACGGTGGCGATGGCTTCTTCTACTGTCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGTGTCGCCGATGAGGATTTGATTTTAAGAGACCCTGGTGATGCCGGTGGCCCAATCTACTCGCAATCCCACACGCGCCGTCGTAATCCGGCGGTGTTGAAGGTAGAGCCTCTATCTCAGTCTCAACCACAGAGCCTTTTCGGTACTAGTCAATCTGAGTTCTGGGAGAGCCTTCAATTAGAGGGAGACAACGATATGCAAAGGGATGATACCATTGTGATGTCCAATGATGGTGTTGGGCCGATTGGTCCTGAGGATTTCGGATCGGGTGGTGCTTTATCCGGAGCTCCGAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGATATGTAATGGGATTGCAGTTGATGATGGAGCTTCAGTGCGAAGTTTTGGTGAAGGAATTCAATGCAAGCCCTGTAATCTGTGGATTGGCGGCGAGCATTTGGTTGAGGTTTGTGACTTCTACACAGGTTTTTGACGAGGATTGGGCCTTTGAGGCCGTTCAGGATTCTGAGAGCCAATGCCTAGATCCTGAAAACATTAGACCTGTTTCAAGTAGGCATAAAGATGAACCCCACAATTTGTATGGTCAGCGGGTAGTAGTTGTGTGGGTTCAATCTTTAAGAAAAAAGATACCATTATCTTGTACTCTAGCTGTTTCCTTTTTGGCTTGCCATGTTGCTCGAGAAGCGATTTTGCCAACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTGTTGACATTGGAGATCGCATTGGGCAAACGTCAAGGGCTTGTCCTATAAGTTTAAAGCATATGTATAGGCCCTCTCGAATTCCCTCGCTGCAGAAGTTGGAATCATTGGCAGCATCGGTAGCTCATACCATAGGGCTAAACCTACCTCCAGTCAACTTTCATTCAATAGCGTGTCGTTATCTCAACAAGCTGGCCCTTCCTATTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTGTGGTTATCAACCAATGAGCTGAGGCTTCCCTCACGTGTTTGTGTAATGTCGATTCTAATTATAGCCATGAGAATTCTCTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCCGGTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGAAACATTCAAGTCCTGCTAATAATTTCAGTAACGTGCAGGCTAATAGTGAAAATGGACCTGGATTTACTTCACATAATGTGGATAATCCGTCTGTCTCGGCTAAATTATCGCATCTTGACATGCCTGAACTGACTGCTTCAGAGTTCCTTCACAAGATTGAAGCTCGGTATCACGAGATTGCTGAGACTTATGAATACTCTAAAAGCTTACCGACCTATCTTCAGCACTGTAAGGATGTCGTCTTTGCTGGTTTAGAGTCTTTGTTTGAGGATCACGAGGAAGAACGGTTGATTGAACAATTTTGGAAGTATTATCAGAATGAAAAGGATCAAGAACAAACAGAAGATATGGATCAAAATGCAGCTTCCAATCAAAAGAGATTGAGGGAAGCTCCGAATGATCGATCATCCAACAAAGACAAGAAACGCAGGAGCGAAGACCGTGTTAGTGGCGAATCATCCGATAACCGAACTGAGTCGAATAATTCTCAGCAAAGTCATTCATCAAAAAGTTCCGAAAATGTAGATGATGAACTATCCTCTGAAGACAAAGCTTCAACACTAACTTCCAAAGACGAAGCGATCAGACGACTGAAACTCGATATGGAAGAAAATAGATTCTGCTACATTCCTCCAAGGGTTTACCCAAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGACGAAGGTGCGCTAACTTACGCTGCTCATGCCGATTACTACTTATTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTAGTACTAGGATCATGCACATTGGTGTGCTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAATCTAGAATCAATCACTCCCTTCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATGTTATGCCTGATCATGCCACGCTCGACTCTATCGATCTCTCAGATTTGAATATTTAAGTGATCAGAGATATATTCGAACGAGTTAAACGATAGATTATATAACAATGTTGGTTCTTATGATCGTATGGAATAAGATTATCAATTGTCAGGTTCAAGATCGTGTAGAAATAAGACACGATCAGAATTTACAACAAAGCCATTGTAGGGTCGGAGCATGTTGAATCTAGAAGTGGTTACCAACGGAATTTATAAGGGTATTCTGTCGAGTGGGGAAGTAGGGTCTTGTGTCAAGTGGATAACTCTTCTAGATAATAATGAACGGTTATCATTGAAGGTTTTTTTCGTTCTTTTAAAAGA

Coding sequence (CDS)

ATGGCAGACCCCCGCAACTTGTCTTGCTACAACTGCGGCAGCGTTGGGCTTACAGACGGTGGCGATGGCTTCTTCTACTGTCTCCAGTGTGGTTCCCAGGCCGACGACATCATCGACACCGGTGTCGCCGATGAGGATTTGATTTTAAGAGACCCTGGTGATGCCGGTGGCCCAATCTACTCGCAATCCCACACGCGCCGTCGTAATCCGGCGGTGTTGAAGGTAGAGCCTCTATCTCAGTCTCAACCACAGAGCCTTTTCGGTACTAGTCAATCTGAGTTCTGGGAGAGCCTTCAATTAGAGGGAGACAACGATATGCAAAGGGATGATACCATTGTGATGTCCAATGATGGTGTTGGGCCGATTGGTCCTGAGGATTTCGGATCGGGTGGTGCTTTATCCGGAGCTCCGAGTTTTGAGGAGTATGCTGATGAAGTGAGGATGAGATATGTAATGGGATTGCAGTTGATGATGGAGCTTCAGTGCGAAGTTTTGGTGAAGGAATTCAATGCAAGCCCTGTAATCTGTGGATTGGCGGCGAGCATTTGGTTGAGGTTTGTGACTTCTACACAGGTTTTTGACGAGGATTGGGCCTTTGAGGCCGTTCAGGATTCTGAGAGCCAATGCCTAGATCCTGAAAACATTAGACCTGTTTCAAGTAGGCATAAAGATGAACCCCACAATTTGTATGGTCAGCGGGTAGTAGTTGTGTGGGTTCAATCTTTAAGAAAAAAGATACCATTATCTTGTACTCTAGCTGTTTCCTTTTTGGCTTGCCATGTTGCTCGAGAAGCGATTTTGCCAACAGACATAATGAAGTGGTCACTTGAGGGGAAACTTCCATATTTTGCTGCTTTTGTTGACATTGGAGATCGCATTGGGCAAACGTCAAGGGCTTGTCCTATAAGTTTAAAGCATATGTATAGGCCCTCTCGAATTCCCTCGCTGCAGAAGTTGGAATCATTGGCAGCATCGGTAGCTCATACCATAGGGCTAAACCTACCTCCAGTCAACTTTCATTCAATAGCGTGTCGTTATCTCAACAAGCTGGCCCTTCCTATTGATAAGATTTTGCCTCATGCTTGCCGCATTTATGAGTGGTCAATGCCTCCTGATTTGTGGTTATCAACCAATGAGCTGAGGCTTCCCTCACGTGTTTGTGTAATGTCGATTCTAATTATAGCCATGAGAATTCTCTATAATCTCCATGGTTTTGGAGAATGGGAAAAGAGTTTGTCCGGTAATTGTGCTTCATCTTTCCCACCTAACCAGAAGAAACATTCAAGTCCTGCTAATAATTTCAGTAACGTGCAGGCTAATAGTGAAAATGGACCTGGATTTACTTCACATAATGTGGATAATCCGTCTGTCTCGGCTAAATTATCGCATCTTGACATGCCTGAACTGACTGCTTCAGAGTTCCTTCACAAGATTGAAGCTCGGTATCACGAGATTGCTGAGACTTATGAATACTCTAAAAGCTTACCGACCTATCTTCAGCACTGTAAGGATGTCGTCTTTGCTGGTTTAGAGTCTTTGTTTGAGGATCACGAGGAAGAACGGTTGATTGAACAATTTTGGAAGTATTATCAGAATGAAAAGGATCAAGAACAAACAGAAGATATGGATCAAAATGCAGCTTCCAATCAAAAGAGATTGAGGGAAGCTCCGAATGATCGATCATCCAACAAAGACAAGAAACGCAGGAGCGAAGACCGTGTTAGTGGCGAATCATCCGATAACCGAACTGAGTCGAATAATTCTCAGCAAAGTCATTCATCAAAAAGTTCCGAAAATGTAGATGATGAACTATCCTCTGAAGACAAAGCTTCAACACTAACTTCCAAAGACGAAGCGATCAGACGACTGAAACTCGATATGGAAGAAAATAGATTCTGCTACATTCCTCCAAGGGTTTACCCAAAGAGATTCGGTTACCTTCACTACTCGAGGAAGATCGACGAAGGTGCGCTAACTTACGCTGCTCATGCCGATTACTACTTATTGCTTCGAGCTTGTGCTAGAGCTGCACAAGTTAGTACTAGGATCATGCACATTGGTGTGCTGAGTCTTGAGAAAAGATTGTCTTGGTTAGAATCTAGAATCAATCACTCCCTTCATCTAACACCCTCTAGTGTTTCTTGTGAGTTTTGCAGTGATGTTATGCCTGATCATGCCACGCTCGACTCTATCGATCTCTCAGATTTGAATATTTAA

Protein sequence

MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIYSQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVGPIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSFPPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEARYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENVDDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSDVMPDHATLDSIDLSDLNI

Homology

[Close]

BLAST of Carg22656 vs. NCBI nr
Match: KAG7020963.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1461.0 bits (3781), Expect = 0.0e+00
Identity = 738/738 (100.00%), Postives = 738/738 (100.00%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120
           SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120

Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480
           PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA
Sbjct: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480

Query: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540
           RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600
           DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600

Query: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660
           DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720

Query: 721 VMPDHATLDSIDLSDLNI 739
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]

BLAST of Carg22656 vs. NCBI nr
Match: XP_023536820.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1450.3 bits (3753), Expect = 0.0e+00
Identity = 732/738 (99.19%), Postives = 735/738 (99.59%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120
           SQSHTRRRNPAVLKVEP+SQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120

Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480
           PPNQK+HSSPANNFSNVQANSENGPGFTSHNVDN SVSAK SHLDMPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540
           RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600
           DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDR+SGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 600

Query: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660
           DDELSSEDKAST TSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720

Query: 721 VMPDHATLDSIDLSDLNI 739
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]

BLAST of Carg22656 vs. NCBI nr
Match: XP_022937641.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita moschata])

HSP 1 Score: 1442.9 bits (3734), Expect = 0.0e+00
Identity = 729/738 (98.78%), Postives = 735/738 (99.59%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120
           SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDND+QRDDTIVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDIQRDDTIVMSNDGVG 120

Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIG+TSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGKTSRAC 300

Query: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIA RYLNKLALP+DKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480
           PPNQK+HSSPAN+FSNVQANSENGPGFTSHNVDN SVSAK SHLDMPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANDFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540
           RYH+IAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHDIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600
           DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600

Query: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660
           DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720

Query: 721 VMPDHATLDSIDLSDLNI 739
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]

BLAST of Carg22656 vs. NCBI nr
Match: XP_022965475.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita maxima])

HSP 1 Score: 1433.7 bits (3710), Expect = 0.0e+00
Identity = 724/738 (98.10%), Postives = 730/738 (98.92%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120
           SQSHTRRRNPAVLKVEP+SQSQPQSLFGTSQSEFWESLQLEGDNDMQRDD IVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 120

Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           PIGPEDFGSGG LSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIA RYLNKLALP+DKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480
           PPNQK+HSSPANNFSNVQANSENGPGFTSHNVDN SVSAK SHL MPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 480

Query: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540
           RYHEIAETYEYSKSLP YLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600
           D+DQNAASNQKRLREAPNDRSSNKDKKRRSEDR+SGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 600

Query: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660
           DDELSSEDKAST TSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRI+HSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 720

Query: 721 VMPDHATLDSIDLSDLNI 739
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]

BLAST of Carg22656 vs. NCBI nr
Match: KAG6586140.1 (TATA box-binding protein-associated factor RNA polymerase I subunit B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1375.5 bits (3559), Expect = 0.0e+00
Identity = 696/696 (100.00%), Postives = 696/696 (100.00%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120
           SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120

Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480
           PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA
Sbjct: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480

Query: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540
           RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600
           DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600

Query: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660
           DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLS 697
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLS
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLS 696

[Close]

BLAST of Carg22656 vs. ExPASy Swiss-Prot
Match: Q5XVF0 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabidopsis thaliana OX=3702 GN=MEE12 PE=1 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 2.9e-126
Identity = 294/731 (40.22%), Postives = 414/731 (56.63%), Query Frame = 0


Query: 9   CYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIYSQSHTRRR 68
           C  C +    +  DG++YC +CG Q +++I TGV D DLI  + G   G +Y+  H RR 
Sbjct: 3   CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLI-GEGGGTQGALYNPKH-RRT 62

Query: 69  NPAVLKVEPLSQSQPQSLFGTSQ-SEFWESLQLE-GDNDMQRD-----DTIVMSNDGVGP 128
            P     +P++ SQP+    TS+ S+F    + E G+ ++ R+     D+ V       P
Sbjct: 63  EP-----QPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKE----P 122

Query: 129 IGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAAS 188
             P DF      +   S+E Y DE R RYV    +M+  QC+ LV +FN +P+I GL   
Sbjct: 123 TEPVDFA-----AETLSYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGP 182

Query: 189 IWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVS--SRHKDEPHNLYGQRVVVVWV 248
           I LR+V  + V+ +DWA  A++DSE Q  D E ++      RHK EP N+ G+R V +W 
Sbjct: 183 ISLRYVALSGVYHKDWANNAIRDSEHQSEDGE-VKDAKRLKRHKAEPRNIDGKRAVTIWF 242

Query: 249 QSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRA 308
             L+K +PLS +L +SFLACH A   +LPTDI++W+ EGKLPY + F+DI +++G+ S A
Sbjct: 243 GILKKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSAA 302

Query: 309 CPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILP 368
           CP+ +  M RP ++ S Q LE+ A+ +A TIGL LPPVNF+ IA  Y+ +L++P DKIL 
Sbjct: 303 CPVKVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKILD 362

Query: 369 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASS 428
            A  I  WS+PP+L+LSTNE +LPSRVCVMSILI+A+R+LYN++G G WE+SL       
Sbjct: 363 LARLIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLG------ 422

Query: 429 FPPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIE 488
                               N+ +G   T     N   + K +  D  EL     L  +E
Sbjct: 423 ------------------FVNASDGDSET-----NSGTAEKATEFDTQEL-----LKNLE 482

Query: 489 ARYHEI-AETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQE- 548
           A+YHE+ AET E  K L +YL   K+  FAGLE    D +  R+++  W  Y  ++D E 
Sbjct: 483 AKYHEVAAETLESEKDLVSYLSLGKNEFFAGLEEDSPD-DTYRIVDNLWNGYPKDEDIEC 542

Query: 549 ---QTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSS 608
              +  D D + + NQ  L                          D+R    N+  S SS
Sbjct: 543 LPKRGRDWDDDVSLNQLSL-------------------------YDSRFSDGNNPCSSSS 602

Query: 609 KSSENVD---DELSSEDKASTLTS--KDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHY 668
           + +E+V    D  SSE + S+     K+ AI+RL  DM ++ FCYIPPRV  KR  YL Y
Sbjct: 603 RRNESVSIGLDLSSSEHRESSSPEKLKEIAIKRLITDMGDDLFCYIPPRVKVKRLDYLQY 656

Query: 669 SRKIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLT 721
            RK ++GAL YAAHADYY+LLR CA+ A++  R MH GVLS E+RL+W+E RI+  LHLT
Sbjct: 663 VRKKEDGALIYAAHADYYILLRVCAKVAEIDVRNMHRGVLSFERRLAWIEKRIDQVLHLT 656

[Close]

BLAST of Carg22656 vs. ExPASy Swiss-Prot
Match: B8AX23 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19584 PE=3 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.2e-99
Identity = 227/594 (38.22%), Postives = 326/594 (54.88%), Query Frame = 0


Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           P  P DF +G    G P  E+ A  VR RYV GLQ++++ Q E LV+      +   LA 
Sbjct: 106 PSEPRDFATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAG 165

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYG------QRV 240
           +IWLR+V +++VFDE W  + +  + S       +    S  KD+   L G         
Sbjct: 166 TIWLRWVAASKVFDEMWVHKMLAIAAS-------VEEGHSASKDKQSELEGDAQKSQSSY 225

Query: 241 VVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIG 300
             ++++SLR  +P+  TLAV FLACHVARE ILPTDI +W++EGKLPY AAF  +   +G
Sbjct: 226 EFLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLG 285

Query: 301 QTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPI 360
            +   CP+S + ++RP+R+    +LE+ A S+A  IGL LP VNF+ IA R+L +L+LPI
Sbjct: 286 SSLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPI 345

Query: 361 DKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEK-SLS 420
           +KILPHACRIYEW+MP +LWLS+N  R+PSRVCVM+ILI+A+R+LY ++G G WE  + +
Sbjct: 346 EKILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQT 405

Query: 421 GNCASSFPPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASE 480
            N   S P     HS        ++ +S N                        E  A E
Sbjct: 406 ENAVGSDPEASAPHS--------IEPDSNNS----------------------EEFDARE 465

Query: 481 FLHKIEARYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 540
            L  + A Y +I   ++YSK + +YL++CKDVVF G+       EEE LI+ FW  Y+  
Sbjct: 466 LLCTLAASYDKIDVGHDYSKEVHSYLKYCKDVVFTGMTFSL---EEEHLIDIFWDMYKG- 525

Query: 541 KDQEQTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHS 600
              ++   +D+NA   Q++L      R++N   KR  + R                    
Sbjct: 526 ---KEVMLLDENAKLCQEKL------RTTNGVNKRCRDGRF------------------- 585

Query: 601 SKSSENVDDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 660
                       ++ K  +    + A++ +K  MEEN FCY+ PR      GYL Y+R+ 
Sbjct: 586 ------------ADTKCCSTPLGNCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRE 616

Query: 661 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLH 708
             G+L Y AHADYY+LLR  A+ A+V  R++H  VL LE+RL W+E R+  SL+
Sbjct: 646 SSGSLIYVAHADYYILLRPFAKLAEVDVRVLHSSVLKLERRLGWIEERVGRSLN 616

[Close]

BLAST of Carg22656 vs. ExPASy Swiss-Prot
Match: Q5W770 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0352700 PE=3 SV=2)

HSP 1 Score: 363.6 bits (932), Expect = 5.2e-99
Identity = 227/594 (38.22%), Postives = 326/594 (54.88%), Query Frame = 0


Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           P  P DF +G    G P  E+ A  VR RYV GLQ++++ Q E LV+      +   LA 
Sbjct: 106 PSEPRDFATGANAWGNP--EDVAARVRWRYVRGLQVILQRQLEALVERHRVGSLAASLAG 165

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYG------QRV 240
           +IWLR+V +++VFDE W  + +  + S       +    S  KD+   L G         
Sbjct: 166 TIWLRWVAASKVFDEMWVHKMLAIAAS-------VEEGHSASKDKQSELEGDAQKSQSSY 225

Query: 241 VVVWVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIG 300
             ++++SLR  +P+  TLAV FLACHVARE ILPTDI +W++EGKLPY AAF  +   +G
Sbjct: 226 EFLFLRSLRMMLPVYSTLAVCFLACHVARETILPTDICRWAMEGKLPYVAAFTQVDKLLG 285

Query: 301 QTSRACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPI 360
            +   CP+S + ++RP+R+    +LE+ A S+A  IGL LP VNF+ IA R+L +L+LPI
Sbjct: 286 SSLNDCPLSSRQLFRPTRVIGAWQLEAAAGSIAQKIGLLLPSVNFYLIAQRFLKELSLPI 345

Query: 361 DKILPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEK-SLS 420
           +KILPHACRIYEW+MP +LWLS+N  R+PSRVCVM+ILI+A+R+LY ++G G WE  + +
Sbjct: 346 EKILPHACRIYEWAMPAELWLSSNPGRVPSRVCVMAILIVALRVLYGINGQGIWESIAQT 405

Query: 421 GNCASSFPPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASE 480
            N   S P     HS        ++ +S N                        E  A E
Sbjct: 406 ENAVGSDPEASAPHS--------IEPDSNNS----------------------EEFDARE 465

Query: 481 FLHKIEARYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNE 540
            L  + A Y +I   ++YSK + +YL++CKDVVF G+       EEE LI+ FW  Y+  
Sbjct: 466 LLCTLAASYDKINVGHDYSKEVHSYLKYCKDVVFTGMTFSL---EEEHLIDIFWDMYKG- 525

Query: 541 KDQEQTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHS 600
              ++   +D+NA   Q++L      R++N   KR  + R                    
Sbjct: 526 ---KEVMLLDENAKLCQEKL------RTTNGVNKRCRDGRF------------------- 585

Query: 601 SKSSENVDDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKI 660
                       ++ K  +    + A++ +K  MEEN FCY+ PR      GYL Y+R+ 
Sbjct: 586 ------------ADTKCCSTPLGNCALQSIKSKMEENGFCYVSPRKRLVSDGYLLYTRRE 616

Query: 661 DEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLH 708
             G+L Y AHADYY+LLR  A+ A+V  R++H  VL LE+RL W+E R+  SL+
Sbjct: 646 SSGSLIYVAHADYYILLRPFAKLAEVDVRVLHSSVLKLERRLGWIEERVGRSLN 616

[Close]

BLAST of Carg22656 vs. ExPASy TrEMBL
Match: A0A6J1FAY0 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbita moschata OX=3662 GN=LOC111443985 PE=3 SV=1)

HSP 1 Score: 1442.9 bits (3734), Expect = 0.0e+00
Identity = 729/738 (98.78%), Postives = 735/738 (99.59%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120
           SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDND+QRDDTIVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDIQRDDTIVMSNDGVG 120

Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIG+TSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGKTSRAC 300

Query: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIA RYLNKLALP+DKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480
           PPNQK+HSSPAN+FSNVQANSENGPGFTSHNVDN SVSAK SHLDMPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANDFSNVQANSENGPGFTSHNVDNLSVSAKYSHLDMPELTASEFLHKIEA 480

Query: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540
           RYH+IAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHDIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600
           DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600

Query: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660
           DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720

Query: 721 VMPDHATLDSIDLSDLNI 739
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]

BLAST of Carg22656 vs. ExPASy TrEMBL
Match: A0A6J1HNT6 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbita maxima OX=3661 GN=LOC111465368 PE=3 SV=1)

HSP 1 Score: 1433.7 bits (3710), Expect = 0.0e+00
Identity = 724/738 (98.10%), Postives = 730/738 (98.92%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120
           SQSHTRRRNPAVLKVEP+SQSQPQSLFGTSQSEFWESLQLEGDNDMQRDD IVMSNDGVG
Sbjct: 61  SQSHTRRRNPAVLKVEPISQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDAIVMSNDGVG 120

Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           PIGPEDFGSGG LSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA
Sbjct: 121 PIGPEDFGSGGVLSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240
           SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ
Sbjct: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240

Query: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300
           SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300

Query: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360
           PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIA RYLNKLALP+DKILPH
Sbjct: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIARRYLNKLALPVDKILPH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420

Query: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480
           PPNQK+HSSPANNFSNVQANSENGPGFTSHNVDN SVSAK SHL MPELTASEFLHKIEA
Sbjct: 421 PPNQKRHSSPANNFSNVQANSENGPGFTSHNVDNLSVSAKFSHLHMPELTASEFLHKIEA 480

Query: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540
           RYHEIAETYEYSKSLP YLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE
Sbjct: 481 RYHEIAETYEYSKSLPIYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQEQTE 540

Query: 541 DMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSSKSSENV 600
           D+DQNAASNQKRLREAPNDRSSNKDKKRRSEDR+SGESSDNRTESNNSQQSHSSKSSENV
Sbjct: 541 DVDQNAASNQKRLREAPNDRSSNKDKKRRSEDRISGESSDNRTESNNSQQSHSSKSSENV 600

Query: 601 DDELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660
           DDELSSEDKAST TSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY
Sbjct: 601 DDELSSEDKASTPTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGALTY 660

Query: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEFCSD 720
           AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRI+HSLHLTPSSVSCEFCSD
Sbjct: 661 AAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRIHHSLHLTPSSVSCEFCSD 720

Query: 721 VMPDHATLDSIDLSDLNI 739
           VMPDHATLDSIDLSDLNI
Sbjct: 721 VMPDHATLDSIDLSDLNI 738

[Close]

BLAST of Carg22656 vs. ExPASy TrEMBL
Match: A0A6J1D8G5 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Momordica charantia OX=3673 GN=LOC111018221 PE=3 SV=1)

HSP 1 Score: 1205.3 bits (3117), Expect = 0.0e+00
Identity = 614/741 (82.86%), Postives = 668/741 (90.15%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADPRNLSCYNCGSVGLTDG DGFFYCLQCGSQADDIIDTGVADEDL+LRD G+ GGPIY
Sbjct: 1   MADPRNLSCYNCGSVGLTDGFDGFFYCLQCGSQADDIIDTGVADEDLLLRDAGERGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGDNDMQRDDTIVMSNDGVG 120
           SQSHTRRR PAVLKVEPLSQSQPQ+LFG + S+FW+SL L+     +  D + + +DGVG
Sbjct: 61  SQSHTRRRIPAVLKVEPLSQSQPQALFGAAHSQFWDSLNLK-----EEGDAVALLDDGVG 120

Query: 121 PIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAA 180
           P GPEDFGSGG LSGAPSFEEYA+EVRMRYVMGLQLM+ELQCE LVKEF ASPVICGLAA
Sbjct: 121 PTGPEDFGSGGVLSGAPSFEEYAEEVRMRYVMGLQLMVELQCEALVKEFKASPVICGLAA 180

Query: 181 SIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVVWVQ 240
           SIWLRFVT+T+VFDEDWAFEAVQDSESQC DP NIRPVSSRHK EPHNL+GQRVVVVWV+
Sbjct: 181 SIWLRFVTATRVFDEDWAFEAVQDSESQCQDPGNIRPVSSRHKAEPHNLFGQRVVVVWVK 240

Query: 241 SLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRAC 300
           SLRKKIPLSCTLA+SFLACHVAREAILPTDIMKWSLEGKLPYFAAF+DI +RIGQTSRAC
Sbjct: 241 SLRKKIPLSCTLAISFLACHVAREAILPTDIMKWSLEGKLPYFAAFIDIENRIGQTSRAC 300

Query: 301 PISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILPH 360
           PIS KHMYRPSRIP LQKLESLAAS+AHTIGLNLPPVNFH IACRYL+KL+LP++KIL H
Sbjct: 301 PISSKHMYRPSRIPPLQKLESLAASIAHTIGLNLPPVNFHLIACRYLDKLSLPVEKILHH 360

Query: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASSF 420
           ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILY+LHGFGEWEKSLS NCASSF
Sbjct: 361 ACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYDLHGFGEWEKSLSINCASSF 420

Query: 421 PPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIEA 480
           PPNQK HSSPA+NFSN QA+ ENG GFTSHNVDN S S +  +L  PELT +EFL KIEA
Sbjct: 421 PPNQKTHSSPAHNFSNTQADRENGSGFTSHNVDNLSASVENLNLHKPELTTTEFLSKIEA 480

Query: 481 RYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEK-DQEQT 540
           RY+EIAETYEYS+ LPTYLQHCKDVVFAGLESLFEDHEEE++IEQFW YYQN+K D EQT
Sbjct: 481 RYYEIAETYEYSRDLPTYLQHCKDVVFAGLESLFEDHEEEKMIEQFWNYYQNQKEDSEQT 540

Query: 541 EDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRT-ESNNSQQSHSSKSSE 600
           ED+DQNAASNQKRLRE   DR SN+ KK R E+ +S ESSDN+T  SNNSQQSHSSKSSE
Sbjct: 541 EDVDQNAASNQKRLREGSADRLSNESKKPRGEEGISRESSDNKTSNSNNSQQSHSSKSSE 600

Query: 601 NVD-DELSSEDKASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSRKIDEGA 660
             D +ELSS+DKA   TS D +++RLKLDMEE RFCYIPPRV PKRFGYLHYSRKID GA
Sbjct: 601 GGDEEELSSKDKAPAQTSIDASVKRLKLDMEEKRFCYIPPRVNPKRFGYLHYSRKIDGGA 660

Query: 661 LTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPSSVSCEF 720
           LTYAAHADYY+LLRACARAAQ+  RIMHIGVLSLEKRLSWLE+RI+HSLHLTPS VSCEF
Sbjct: 661 LTYAAHADYYILLRACARAAQIDIRIMHIGVLSLEKRLSWLEARIHHSLHLTPSGVSCEF 720

Query: 721 CSDVMPDHATLDSIDLSDLNI 739
           CSDV+P++AT+DSI LSDLNI
Sbjct: 721 CSDVVPENATVDSIGLSDLNI 736

[Close]

BLAST of Carg22656 vs. ExPASy TrEMBL
Match: A0A1S3B4G3 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis melo OX=3656 GN=LOC103485898 PE=3 SV=1)

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 605/747 (80.99%), Postives = 659/747 (88.22%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADP NLSCYNCGS+GLTDG DGFFYCLQCGSQADDIIDTGVA+EDL LRD G +GGPIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLALRDVGKSGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGD---NDMQRDDTIVMSND 120
           SQSHTRRRNP VLKVEPLSQSQP  LFGTSQSEFW+SL L+ D   N  Q DD IVM ND
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQP--LFGTSQSEFWDSLHLKEDPSGNVGQNDDGIVMLND 120

Query: 121 GVGPIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICG 180
           GVGP GPEDFGSG  LSG PSFEEYADEVRMRYVMGLQL+MELQCEVLVKEF A+P+ICG
Sbjct: 121 GVGPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICG 180

Query: 181 LAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVV 240
           LAASIWLRFVT+T+VFDEDWAF+ VQ+SESQCLD E IR V S HKDEPHN YGQRVVV+
Sbjct: 181 LAASIWLRFVTATRVFDEDWAFQTVQESESQCLDTERIRRVCSSHKDEPHNFYGQRVVVL 240

Query: 241 WVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTS 300
           WV+SLRKKIPL CTLAVSFLACHVAREAILPTDI+KWSLEGKLPY+AAFVDI  RIG+TS
Sbjct: 241 WVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTS 300

Query: 301 RACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKI 360
           RACPIS K M+RPSRI SLQKLESLAAS+AHTIGLNLPPVNFHSIACRYLNKLALP+DKI
Sbjct: 301 RACPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKI 360

Query: 361 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCA 420
           LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMR+LYNLHGFGEWEKSLS NCA
Sbjct: 361 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRVLYNLHGFGEWEKSLSVNCA 420

Query: 421 SSFPPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHK 480
           S FPPNQK HSSPANNFSN+QA+SEN PGFTSH++DNPSVS      + P LT +EFL K
Sbjct: 421 SYFPPNQKTHSSPANNFSNMQADSENRPGFTSHDLDNPSVSP-----ENPHLTTTEFLRK 480

Query: 481 IEARYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLF-EDHEEERLIEQFWKYYQNEKDQ 540
           IEARYHEIAETYEYSK LP+YLQ+CKDVVFAG ESLF +DHEE+++IE+ W YYQNEKD 
Sbjct: 481 IEARYHEIAETYEYSKDLPSYLQYCKDVVFAGSESLFIDDHEEQKMIEKLWNYYQNEKDH 540

Query: 541 EQTEDMDQNAASNQKRLREAPNDRSSNKDKK-RRSEDRVSGESSDNRTESNNSQQSHSSK 600
           +QTED+DQN ASN KRLRE  NDR S++ KK +  ED +SGESS+NRT S +S+QSHSSK
Sbjct: 541 DQTEDVDQNVASNLKRLREGSNDRLSSESKKVKGEEDCISGESSNNRTGSIDSRQSHSSK 600

Query: 601 SSENV---DDELSSEDK-ASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSR 660
           S EN    DDE SSEDK AS+LTS +EAIR+LKLDMEE RFCYIPPR  PKRFGYLHYSR
Sbjct: 601 SLENSDDDDDEQSSEDKAASSLTSINEAIRQLKLDMEEKRFCYIPPRANPKRFGYLHYSR 660

Query: 661 KIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPS 720
           KIDEGALTYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE RI+ +L LTPS
Sbjct: 661 KIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEDRIHKTLRLTPS 720

Query: 721 SVSCEFCSDVMPDHATLDSIDLSDLNI 739
           SV+CEFCSDV P+H  +DS+ LSDL+I
Sbjct: 721 SVTCEFCSDV-PNH--IDSVGLSDLDI 737

[Close]

BLAST of Carg22656 vs. ExPASy TrEMBL
Match: A0A5D3C954 (TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001970 PE=3 SV=1)

HSP 1 Score: 1157.1 bits (2992), Expect = 0.0e+00
Identity = 605/747 (80.99%), Postives = 659/747 (88.22%), Query Frame = 0


Query: 1   MADPRNLSCYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIY 60
           MADP NLSCYNCGS+GLTDG DGFFYCLQCGSQADDIIDTGVA+EDL LRD G +GGPIY
Sbjct: 1   MADPSNLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLALRDVGKSGGPIY 60

Query: 61  SQSHTRRRNPAVLKVEPLSQSQPQSLFGTSQSEFWESLQLEGD---NDMQRDDTIVMSND 120
           SQSHTRRRNP VLKVEPLSQSQP  LFGTSQSEFW+SL L+ D   N  Q DD IVM ND
Sbjct: 61  SQSHTRRRNPTVLKVEPLSQSQP--LFGTSQSEFWDSLHLKEDPSGNVGQNDDGIVMLND 120

Query: 121 GVGPIGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICG 180
           GVGP GPEDFGSG  LSG PSFEEYADEVRMRYVMGLQL+MELQCEVLVKEF A+P+ICG
Sbjct: 121 GVGPTGPEDFGSGDVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKEFKATPIICG 180

Query: 181 LAASIWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVSSRHKDEPHNLYGQRVVVV 240
           LAASIWLRFVT+T+VFDEDWAF+ VQ+SESQCLD E IR V S HKDEPHN YGQRVVV+
Sbjct: 181 LAASIWLRFVTATRVFDEDWAFQTVQESESQCLDTERIRRVCSSHKDEPHNFYGQRVVVL 240

Query: 241 WVQSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTS 300
           WV+SLRKKIPL CTLAVSFLACHVAREAILPTDI+KWSLEGKLPY+AAFVDI  RIG+TS
Sbjct: 241 WVKSLRKKIPLFCTLAVSFLACHVAREAILPTDIIKWSLEGKLPYYAAFVDIESRIGKTS 300

Query: 301 RACPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKI 360
           RACPIS K M+RPSRI SLQKLESLAAS+AHTIGLNLPPVNFHSIACRYLNKLALP+DKI
Sbjct: 301 RACPISSKLMHRPSRISSLQKLESLAASIAHTIGLNLPPVNFHSIACRYLNKLALPVDKI 360

Query: 361 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCA 420
           LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMR+LYNLHGFGEWEKSLS NCA
Sbjct: 361 LPHACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRVLYNLHGFGEWEKSLSVNCA 420

Query: 421 SSFPPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHK 480
           S FPPNQK HSSPANNFSN+QA+SEN PGFTSH++DNPSVS      + P LT +EFL K
Sbjct: 421 SYFPPNQKTHSSPANNFSNMQADSENRPGFTSHDLDNPSVSP-----ENPHLTTTEFLRK 480

Query: 481 IEARYHEIAETYEYSKSLPTYLQHCKDVVFAGLESLF-EDHEEERLIEQFWKYYQNEKDQ 540
           IEARYHEIAETYEYSK LP+YLQ+CKDVVFAG ESLF +DHEE+++IE+ W YYQNEKD 
Sbjct: 481 IEARYHEIAETYEYSKDLPSYLQYCKDVVFAGSESLFIDDHEEQKMIEKLWNYYQNEKDH 540

Query: 541 EQTEDMDQNAASNQKRLREAPNDRSSNKDKK-RRSEDRVSGESSDNRTESNNSQQSHSSK 600
           +QTED+DQN ASN KRLRE  NDR S++ KK +  ED +SGESS+NRT S +S+QSHSSK
Sbjct: 541 DQTEDVDQNVASNLKRLREGSNDRLSSESKKVKGEEDCISGESSNNRTGSIDSRQSHSSK 600

Query: 601 SSENV---DDELSSEDK-ASTLTSKDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHYSR 660
           S EN    DDE SSEDK AS+LTS +EAIR+LKLDMEE RFCYIPPR  PKRFGYLHYSR
Sbjct: 601 SLENSDDDDDEQSSEDKAASSLTSINEAIRQLKLDMEEKRFCYIPPRANPKRFGYLHYSR 660

Query: 661 KIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLTPS 720
           KIDEGALTYAAHADYY+LLRACARAAQV  RIMHIGVLSLEKRLSWLE RI+ +L LTPS
Sbjct: 661 KIDEGALTYAAHADYYILLRACARAAQVDIRIMHIGVLSLEKRLSWLEDRIHKTLRLTPS 720

Query: 721 SVSCEFCSDVMPDHATLDSIDLSDLNI 739
           SV+CEFCSDV P+H  +DS+ LSDL+I
Sbjct: 721 SVTCEFCSDV-PNH--IDSVGLSDLDI 737

[Close]

BLAST of Carg22656 vs. TAIR 10
Match: AT2G02955.1 (maternal effect embryo arrest 12 )

HSP 1 Score: 454.1 bits (1167), Expect = 2.1e-127
Identity = 294/731 (40.22%), Postives = 414/731 (56.63%), Query Frame = 0


Query: 9   CYNCGSVGLTDGGDGFFYCLQCGSQADDIIDTGVADEDLILRDPGDAGGPIYSQSHTRRR 68
           C  C +    +  DG++YC +CG Q +++I TGV D DLI  + G   G +Y+  H RR 
Sbjct: 3   CTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLI-GEGGGTQGALYNPKH-RRT 62

Query: 69  NPAVLKVEPLSQSQPQSLFGTSQ-SEFWESLQLE-GDNDMQRD-----DTIVMSNDGVGP 128
            P     +P++ SQP+    TS+ S+F    + E G+ ++ R+     D+ V       P
Sbjct: 63  EP-----QPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKE----P 122

Query: 129 IGPEDFGSGGALSGAPSFEEYADEVRMRYVMGLQLMMELQCEVLVKEFNASPVICGLAAS 188
             P DF      +   S+E Y DE R RYV    +M+  QC+ LV +FN +P+I GL   
Sbjct: 123 TEPVDFA-----AETLSYENYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGP 182

Query: 189 IWLRFVTSTQVFDEDWAFEAVQDSESQCLDPENIRPVS--SRHKDEPHNLYGQRVVVVWV 248
           I LR+V  + V+ +DWA  A++DSE Q  D E ++      RHK EP N+ G+R V +W 
Sbjct: 183 ISLRYVALSGVYHKDWANNAIRDSEHQSEDGE-VKDAKRLKRHKAEPRNIDGKRAVTIWF 242

Query: 249 QSLRKKIPLSCTLAVSFLACHVAREAILPTDIMKWSLEGKLPYFAAFVDIGDRIGQTSRA 308
             L+K +PLS +L +SFLACH A   +LPTDI++W+ EGKLPY + F+DI +++G+ S A
Sbjct: 243 GILKKTMPLSSSLVISFLACHQAGAPVLPTDIVRWAREGKLPYLSCFLDIREQMGERSAA 302

Query: 309 CPISLKHMYRPSRIPSLQKLESLAASVAHTIGLNLPPVNFHSIACRYLNKLALPIDKILP 368
           CP+ +  M RP ++ S Q LE+ A+ +A TIGL LPPVNF+ IA  Y+ +L++P DKIL 
Sbjct: 303 CPVKVSIMARPFQVISAQMLEARASVIADTIGLPLPPVNFYGIASNYIKQLSIPEDKILD 362

Query: 369 HACRIYEWSMPPDLWLSTNELRLPSRVCVMSILIIAMRILYNLHGFGEWEKSLSGNCASS 428
            A  I  WS+PP+L+LSTNE +LPSRVCVMSILI+A+R+LYN++G G WE+SL       
Sbjct: 363 LARLIQNWSLPPELYLSTNEQKLPSRVCVMSILIVAIRMLYNINGLGVWERSLG------ 422

Query: 429 FPPNQKKHSSPANNFSNVQANSENGPGFTSHNVDNPSVSAKLSHLDMPELTASEFLHKIE 488
                               N+ +G   T     N   + K +  D  EL     L  +E
Sbjct: 423 ------------------FVNASDGDSET-----NSGTAEKATEFDTQEL-----LKNLE 482

Query: 489 ARYHEI-AETYEYSKSLPTYLQHCKDVVFAGLESLFEDHEEERLIEQFWKYYQNEKDQE- 548
           A+YHE+ AET E  K L +YL   K+  FAGLE    D +  R+++  W  Y  ++D E 
Sbjct: 483 AKYHEVAAETLESEKDLVSYLSLGKNEFFAGLEEDSPD-DTYRIVDNLWNGYPKDEDIEC 542

Query: 549 ---QTEDMDQNAASNQKRLREAPNDRSSNKDKKRRSEDRVSGESSDNRTESNNSQQSHSS 608
              +  D D + + NQ  L                          D+R    N+  S SS
Sbjct: 543 LPKRGRDWDDDVSLNQLSL-------------------------YDSRFSDGNNPCSSSS 602

Query: 609 KSSENVD---DELSSEDKASTLTS--KDEAIRRLKLDMEENRFCYIPPRVYPKRFGYLHY 668
           + +E+V    D  SSE + S+     K+ AI+RL  DM ++ FCYIPPRV  KR  YL Y
Sbjct: 603 RRNESVSIGLDLSSSEHRESSSPEKLKEIAIKRLITDMGDDLFCYIPPRVKVKRLDYLQY 656

Query: 669 SRKIDEGALTYAAHADYYLLLRACARAAQVSTRIMHIGVLSLEKRLSWLESRINHSLHLT 721
            RK ++GAL YAAHADYY+LLR CA+ A++  R MH GVLS E+RL+W+E RI+  LHLT
Sbjct: 663 VRKKEDGALIYAAHADYYILLRVCAKVAEIDVRNMHRGVLSFERRLAWIEKRIDQVLHLT 656

The following BLAST results are available for this feature:

BLAST of Carg22656 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020963.1	0.0e+00	100.00	TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita...	[more]
XP_023536820.1	0.0e+00	99.19	TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita...	[more]
XP_022937641.1	0.0e+00	98.78	TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita...	[more]
XP_022965475.1	0.0e+00	98.10	TATA box-binding protein-associated factor RNA polymerase I subunit B [Cucurbita...	[more]
KAG6586140.1	0.0e+00	100.00	TATA box-binding protein-associated factor RNA polymerase I subunit B, partial [...	[more]

BLAST of Carg22656 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XVF0	2.9e-126	40.22	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Arabido...	[more]
B8AX23	5.2e-99	38.22	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s...	[more]
Q5W770	5.2e-99	38.22	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Oryza s...	[more]

BLAST of Carg22656 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FAY0	0.0e+00	98.78	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbi...	[more]
A0A6J1HNT6	0.0e+00	98.10	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucurbi...	[more]
A0A6J1D8G5	0.0e+00	82.86	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Momordi...	[more]
A0A1S3B4G3	0.0e+00	80.99	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis...	[more]
A0A5D3C954	0.0e+00	80.99	TATA box-binding protein-associated factor RNA polymerase I subunit B OS=Cucumis...	[more]

BLAST of Carg22656 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02955.1	2.1e-127	40.22	maternal effect embryo arrest 12	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 553..579
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 580..595
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..452
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 596..613
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 534..613
IPR033599	RNA polymerase I transcription initiation factor TAF1B/Rrn7	PANTHER	PTHR31576	TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B	coord: 5..720

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22656-RA	Carg22656-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042790	nucleolar large rRNA transcription by RNA polymerase I
biological_process	GO:0001188	RNA polymerase I preinitiation complex assembly
biological_process	GO:0006360	transcription by RNA polymerase I
cellular_component	GO:0070860	RNA polymerase I core factor complex
cellular_component	GO:0005668	RNA polymerase transcription factor SL1 complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0001164	RNA polymerase I core promoter sequence-specific DNA binding