Carg22628 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22628
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	polcalcin Phl p 7-like
Location	Carg_Chr17: 4934661 .. 4934915 (-)
RNA-Seq Expression	Carg22628
Synteny	Carg22628

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGTCGGAGGCAATGAGGGCAGAATGCGAGCGAATCTTCAACCGCTTCGACTGCAACGGGGACGGCAAGATCTCGCTGTCGGAGTTGGAGAACGCTCTCCACGCACTTGGCTCCTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAACGGCTTCATTTCCCTAGATGAACTGTGCGAGTTTCAGAGGGCTAATCCCGATTTGATGAAGGAGGTCTGCAAAAGGCTTTAG

mRNA sequence

ATGGCGGAGTCGGAGGCAATGAGGGCAGAATGCGAGCGAATCTTCAACCGCTTCGACTGCAACGGGGACGGCAAGATCTCGCTGTCGGAGTTGGAGAACGCTCTCCACGCACTTGGCTCCTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAACGGCTTCATTTCCCTAGATGAACTGTGCGAGTTTCAGAGGGCTAATCCCGATTTGATGAAGGAGGTCTGCAAAAGGCTTTAG

Coding sequence (CDS)

ATGGCGGAGTCGGAGGCAATGAGGGCAGAATGCGAGCGAATCTTCAACCGCTTCGACTGCAACGGGGACGGCAAGATCTCGCTGTCGGAGTTGGAGAACGCTCTCCACGCACTTGGCTCCTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAACGGCTTCATTTCCCTAGATGAACTGTGCGAGTTTCAGAGGGCTAATCCCGATTTGATGAAGGAGGTCTGCAAAAGGCTTTAG

Protein sequence

MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCKRL

Homology

[Close]

BLAST of Carg22628 vs. NCBI nr
Match: XP_022929895.1 (polcalcin Phl p 7-like [Cucurbita moschata] >KAG6575329.1 hypothetical protein SDJN03_25968, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013869.1 hypothetical protein SDJN02_24038, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-39
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF
Sbjct: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISLDELCEFQRANPDLMKEVCKRL
Sbjct: 61 ISLDELCEFQRANPDLMKEVCKRL 84

[Close]

BLAST of Carg22628 vs. NCBI nr
Match: XP_023549323.1 (polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.9 bits (429), Expect = 9.6e-39
Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MAESEA+RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF
Sbjct: 1  MAESEAIRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISLDELCEFQRANPDLMKEVC+RL
Sbjct: 61 ISLDELCEFQRANPDLMKEVCRRL 84

[Close]

BLAST of Carg22628 vs. NCBI nr
Match: XP_022992461.1 (polcalcin Phl p 7-like [Cucurbita maxima])

HSP 1 Score: 166.8 bits (421), Expect = 8.1e-38
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MAESEA+RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF
Sbjct: 1  MAESEAIRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISLDEL EFQRANPDLMKEVCKRL
Sbjct: 61 ISLDELFEFQRANPDLMKEVCKRL 84

[Close]

BLAST of Carg22628 vs. NCBI nr
Match: XP_038886760.1 (polcalcin Phl p 7-like [Benincasa hispida])

HSP 1 Score: 151.8 bits (382), Expect = 2.7e-33
Identity = 74/84 (88.10%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MA+SE  R ECERIF RFD +GDGKISLSELE+AL ALGSSSPEEVRRRMSEIDKDGNGF
Sbjct: 1  MADSEGTRGECERIFKRFDSDGDGKISLSELESALRALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISLDELC+FQRANPDLMKEVCKRL
Sbjct: 61 ISLDELCDFQRANPDLMKEVCKRL 84

[Close]

BLAST of Carg22628 vs. NCBI nr
Match: XP_022150429.1 (polcalcin Syr v 3-like [Momordica charantia])

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MA+    RAECERIFNRFD NGDG+ISLSELE+AL ALGSSSPEEVRRRMSEIDKDG+G+
Sbjct: 1  MADDGRNRAECERIFNRFDSNGDGQISLSELESALSALGSSSPEEVRRRMSEIDKDGDGY 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISL+ELC+FQRANPDLMKEVCKRL
Sbjct: 61 ISLEELCDFQRANPDLMKEVCKRL 84

[Close]

BLAST of Carg22628 vs. ExPASy Swiss-Prot
Match: Q84V36 (Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.0e-19
Identity = 48/74 (64.86%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 9  AECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCE 68
          A+ ERIF RFD NGDGKIS SEL +AL  LGS +P+EVRR M+EID DG+GFIS DE  +
Sbjct: 11 ADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTD 70

Query: 69 FQRANPDLMKEVCK 83
          F RAN  L+K+V K
Sbjct: 71 FARANRGLVKDVSK 84

[Close]

BLAST of Carg22628 vs. ExPASy Swiss-Prot
Match: O82040 (Polcalcin Phl p 7 OS=Phleum pratense OX=15957 GN=P7 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.2e-19
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 7  MRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDEL 66
          M  + ERIF RFD NGDGKISLSEL +AL  LGS+S +EV+R M+EID DG+GFI  +E 
Sbjct: 1  MADDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEF 60

Query: 67 CEFQRANPDLMKEVCK 83
            F  ANP LMK+V K
Sbjct: 61 ISFCNANPGLMKDVAK 76

[Close]

BLAST of Carg22628 vs. ExPASy Swiss-Prot
Match: P58171 (Polcalcin Syr v 3 OS=Syringa vulgaris OX=34270 GN=SYRV3 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-18
Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 9  AECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCE 68
          AE ERIF RFD NGDGKIS SEL   L  LGS +PEE++R M+EID DG+GFIS +E  +
Sbjct: 6  AELERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGFISFEEFKD 65

Query: 69 FQRANPDLMKEVCK 83
          F RAN  L+K+V K
Sbjct: 66 FARANSGLIKDVAK 79

[Close]

BLAST of Carg22628 vs. ExPASy Swiss-Prot
Match: O81092 (Polcalcin Ole e 3 OS=Olea europaea OX=4146 GN=OLE3 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-18
Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MA+     AE ERIF RFD NGDGKIS SEL   L  LGS +PEE++R M+EID DG+GF
Sbjct: 1  MADDPQEVAEHERIFKRFDANGDGKISSSELGETLKTLGSVTPEEIQRMMAEIDTDGDGF 60

Query: 61 ISLDELCEFQRANPDLMKEVCK 83
          IS +E   F RAN  L+K+V K
Sbjct: 61 ISFEEFTVFARANRGLVKDVAK 82

[Close]

BLAST of Carg22628 vs. ExPASy Swiss-Prot
Match: P94092 (Polcalcin Cyn d 7 OS=Cynodon dactylon OX=28909 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-18
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 10 ECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEF 69
          + E IF RFD NGDGKISL+EL +AL  LGS+S +EV+R M+EID DG+GFI  DE   F
Sbjct: 6  DMEHIFKRFDTNGDGKISLAELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFDEFISF 65

Query: 70 QRANPDLMKEVCK 83
            ANP LMK+V K
Sbjct: 66 CNANPGLMKDVAK 78

[Close]

BLAST of Carg22628 vs. ExPASy TrEMBL
Match: A0A6J1EVJ6 (polcalcin Phl p 7-like OS=Cucurbita moschata OX=3662 GN=LOC111436362 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 7.2e-40
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF
Sbjct: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISLDELCEFQRANPDLMKEVCKRL
Sbjct: 61 ISLDELCEFQRANPDLMKEVCKRL 84

[Close]

BLAST of Carg22628 vs. ExPASy TrEMBL
Match: A0A6J1JTM0 (polcalcin Phl p 7-like OS=Cucurbita maxima OX=3661 GN=LOC111488757 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.9e-38
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MAESEA+RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF
Sbjct: 1  MAESEAIRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISLDEL EFQRANPDLMKEVCKRL
Sbjct: 61 ISLDELFEFQRANPDLMKEVCKRL 84

[Close]

BLAST of Carg22628 vs. ExPASy TrEMBL
Match: A0A0A0KAW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041150 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.2e-32
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MA+S+  R ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNG+
Sbjct: 1  MADSDGNRMECERIFKRFDVNGDGKISLSELEAALHALGSSAPEEVGRRMSEIDKDGNGY 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISL+ELC+FQRANPDLMKEVCKRL
Sbjct: 61 ISLEELCDFQRANPDLMKEVCKRL 84

[Close]

BLAST of Carg22628 vs. ExPASy TrEMBL
Match: A0A6J1DA15 (polcalcin Syr v 3-like OS=Momordica charantia OX=3673 GN=LOC111018587 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.2e-32
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MA+    RAECERIFNRFD NGDG+ISLSELE+AL ALGSSSPEEVRRRMSEIDKDG+G+
Sbjct: 1  MADDGRNRAECERIFNRFDSNGDGQISLSELESALSALGSSSPEEVRRRMSEIDKDGDGY 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISL+ELC+FQRANPDLMKEVCKRL
Sbjct: 61 ISLEELCDFQRANPDLMKEVCKRL 84

[Close]

BLAST of Carg22628 vs. ExPASy TrEMBL
Match: A0A5A7V7E6 (Polcalcin Syr v 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1213G00200 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.6e-31
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 1  MAESEAMRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGF 60
          MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKDGNGF
Sbjct: 1  MADSDG-KMECERIFKRFDINGDGKISLSELETALHALGSSAPEEVGRRMSEIDKDGNGF 60

Query: 61 ISLDELCEFQRANPDLMKEVCKRL 85
          ISL+ELC+FQRANPDLMKEVCKRL
Sbjct: 61 ISLEELCDFQRANPDLMKEVCKRL 83

[Close]

BLAST of Carg22628 vs. TAIR 10
Match: AT3G03430.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 84.3 bits (207), Expect = 5.0e-17
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 0


Query: 8  RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELC 67
          +AE +RIF +FD NGDGKIS +EL +AL  LGS + E+++R M+EID DG+G+IS  E  
Sbjct: 7  KAEHDRIFKKFDANGDGKISAAELGDALKNLGSVTHEDIKRMMAEIDTDGDGYISYQEFI 66

Query: 68 EFQRANPDLMKEVCK 83
          +F  AN  LMK+V K
Sbjct: 67 DFASANRGLMKDVAK 81

[Close]

BLAST of Carg22628 vs. TAIR 10
Match: AT5G17480.1 (pollen calcium-binding protein 1 )

HSP 1 Score: 84.3 bits (207), Expect = 5.0e-17
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 8  RAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELC 67
          +AE +RIF +FD NGDGKIS +ELE AL  LGS + ++V+R M+EID DG+G IS  E  
Sbjct: 7  KAEHDRIFKKFDANGDGKISAAELEEALKTLGSVTADDVKRMMAEIDTDGDGNISYQEFT 66

Query: 68 EFQRANPDLMKEVCK 83
          +F  AN  LMK+V K
Sbjct: 67 DFAGANRGLMKDVAK 81

[Close]

BLAST of Carg22628 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 62.4 bits (150), Expect = 2.0e-10
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 10 ECERIFNRFDCNGDGKISLSELENALHALG-SSSPEEVRRRMSEIDKDGNGFISLDE 66
          + +++F RFD NGDGKIS+ EL+  + AL  ++SPEE    M + D DGNGFI LDE
Sbjct: 17 DIKKVFQRFDKNGDGKISVDELKEVIRALSPTASPEETVTMMKQFDLDGNGFIDLDE 73

[Close]

BLAST of Carg22628 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 )

HSP 1 Score: 60.1 bits (144), Expect = 1.0e-09
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 10 ECERIFNRFDCNGDGKISLSELENALHALG-SSSPEEVRRRMSEIDKDGNGFISLDE 66
          + +++F RFD N DGKIS+ EL++ + AL  ++S EE +  M E D DGNGFI LDE
Sbjct: 15 DIKKVFQRFDKNNDGKISIDELKDVIGALSPNASQEETKAMMKEFDLDGNGFIDLDE 71

[Close]

BLAST of Carg22628 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family )

HSP 1 Score: 59.7 bits (143), Expect = 1.3e-09
Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 0


Query: 10 ECERIFNRFDCNGDGKISLSELENALHALGSS-SPEEVRRRMSEIDKDGNGFISLDELCE 69
          E +++F++FD NGDGKIS+SEL N   ++G+S + EE+ R + EID D +GFI+ +E   
Sbjct: 20 ELKKVFDKFDANGDGKISVSELGNVFKSMGTSYTEEELNRVLDEIDIDCDGFINQEEFAT 79

Query: 70 FQRAN 74
            R++
Sbjct: 80 ICRSS 84

The following BLAST results are available for this feature:

BLAST of Carg22628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929895.1	1.5e-39	100.00	polcalcin Phl p 7-like [Cucurbita moschata] >KAG6575329.1 hypothetical protein S...	[more]
XP_023549323.1	9.6e-39	97.62	polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992461.1	8.1e-38	97.62	polcalcin Phl p 7-like [Cucurbita maxima]	[more]
XP_038886760.1	2.7e-33	88.10	polcalcin Phl p 7-like [Benincasa hispida]	[more]
XP_022150429.1	1.5e-31	84.52	polcalcin Syr v 3-like [Momordica charantia]	[more]

BLAST of Carg22628 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84V36	3.0e-19	64.86	Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1	[more]
O82040	5.2e-19	61.84	Polcalcin Phl p 7 OS=Phleum pratense OX=15957 GN=P7 PE=1 SV=1	[more]
P58171	1.1e-18	62.16	Polcalcin Syr v 3 OS=Syringa vulgaris OX=34270 GN=SYRV3 PE=1 SV=1	[more]
O81092	1.5e-18	58.54	Polcalcin Ole e 3 OS=Olea europaea OX=4146 GN=OLE3 PE=1 SV=1	[more]
P94092	2.6e-18	61.64	Polcalcin Cyn d 7 OS=Cynodon dactylon OX=28909 PE=1 SV=2	[more]

BLAST of Carg22628 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EVJ6	7.2e-40	100.00	polcalcin Phl p 7-like OS=Cucurbita moschata OX=3662 GN=LOC111436362 PE=4 SV=1	[more]
A0A6J1JTM0	3.9e-38	97.62	polcalcin Phl p 7-like OS=Cucurbita maxima OX=3661 GN=LOC111488757 PE=4 SV=1	[more]
A0A0A0KAW9	3.2e-32	84.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041150 PE=4 SV=1	[more]
A0A6J1DA15	7.2e-32	84.52	polcalcin Syr v 3-like OS=Momordica charantia OX=3673 GN=LOC111018587 PE=4 SV=1	[more]
A0A5A7V7E6	3.6e-31	84.52	Polcalcin Syr v 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]

BLAST of Carg22628 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03430.1	5.0e-17	54.67	Calcium-binding EF-hand family protein	[more]
AT5G17480.1	5.0e-17	56.00	pollen calcium-binding protein 1	[more]
AT5G37770.1	2.0e-10	52.63	EF hand calcium-binding protein family	[more]
AT1G66400.1	1.0e-09	50.88	calmodulin like 23	[more]
AT1G73630.1	1.3e-09	44.62	EF hand calcium-binding protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 10..38 e-value: 5.6E-5 score: 32.5 coord: 45..73 e-value: 0.004 score: 26.4
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 10..70 e-value: 4.4E-14 score: 52.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 44..76 score: 10.887003
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 6..41 score: 14.290241
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 10..69 e-value: 7.80866E-15 score: 60.6393
None	No IPR available	GENE3D	1.10.238.10		coord: 2..84 e-value: 4.7E-22 score: 79.7
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 7..82
None	No IPR available	PANTHER	PTHR10891:SF775	CALCIUM-BINDING POLLEN ALLERGEN	coord: 7..82
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 19..31
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 54..66
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 6..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22628-RA	Carg22628-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding