Carg22616 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22616
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Histone H3
Location	Carg_Chr17: 5048025 .. 5048312 (+)
RNA-Seq Expression	Carg22616
Synteny	Carg22616

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGCACCAAGCAAACAGCCCGAAAGTCCACCGGCGGTAAGGCTCCTCGTAAGCAATTGGCGACGAAGGCTGCTCGGAAATCGGCTCCGGCGACCGGAGGAGTCAAGAAGCCGCACAGATTCCGTCCAGGGACTGTTGCGCTGAGGGAGATCAGGAAGTACCAGAAGAGCGATTGTTCGAAGATACTAACCTGTGTGCGATTCATGCTAAGAGAGTCACGATTATGCCTAAGGATATTCAATTGGCCAGGCGGATTAGAGGTGAGAGAGCTTAGAGAGCTGTGA

mRNA sequence

ATGGCTCGCACCAAGCAAACAGCCCGAAAGTCCACCGGCGGTAAGGCTCCTCGTAAGCAATTGGCGACGAAGGCTGCTCGGAAATCGGCTCCGGCGACCGGAGGAGTCAAGAAGCCGCACAGATTCCGTCCAGGGACTGTTGCGCTGAGGGAGATCAGGAAGTACCAGAAGAGCGATTGTTCGAAGATACTAACCTGTGTGCGATTCATGCTAAGAGAGTCACGATTATGCCTAAGGATATTCAATTGGCCAGGCGGATTAGAGGTGAGAGAGCTTAGAGAGCTGTGA

Coding sequence (CDS)

ATGGCTCGCACCAAGCAAACAGCCCGAAAGTCCACCGGCGGTAAGGCTCCTCGTAAGCAATTGGCGACGAAGGCTGCTCGGAAATCGGCTCCGGCGACCGGAGGAGTCAAGAAGCCGCACAGATTCCGTCCAGGGACTGTTGCGCTGAGGGAGATCAGGAAGTACCAGAAGAGCGATTGTTCGAAGATACTAACCTGTGTGCGATTCATGCTAAGAGAGTCACGATTATGCCTAAGGATATTCAATTGGCCAGGCGGATTAGAGGTGAGAGAGCTTAGAGAGCTGTGA

Protein sequence

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSDCSKILTCVRFMLRESRLCLRIFNWPGGLEVRELREL

Homology

[Close]

BLAST of Carg22616 vs. NCBI nr
Match: KAG7013881.1 (histone H3.2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSDC 60
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSDC
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSDC 60

Query: 61 SKILTCVRFMLRESRLCLRIFNWPGGLEVRELREL 96
          SKILTCVRFMLRESRLCLRIFNWPGGLEVRELREL
Sbjct: 61 SKILTCVRFMLRESRLCLRIFNWPGGLEVRELREL 95

[Close]

BLAST of Carg22616 vs. NCBI nr
Match: PNI32233.1 (H3F3B isoform 11 [Pan troglodytes])

HSP 1 Score: 123.6 bits (309), Expect = 8.9e-25
Identity = 72/113 (63.72%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  -------------------CSKILTCVRFMLRESRLCLRIFNWPGGLEVRELR 94
                              CSKI TCV   LRES  C +  +W  G   REL+
Sbjct: 61  LLIRKLPFQRRLAKRTWWVCSKIPTCVPSTLRESPSCPKTSSWLAGYGGRELK 113

[Close]

BLAST of Carg22616 vs. NCBI nr
Match: PNJ87933.1 (H3F3B isoform 4 [Pongo abelii])

HSP 1 Score: 121.3 bits (303), Expect = 4.4e-24
Identity = 71/113 (62.83%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  -------------------CSKILTCVRFMLRESRLCLRIFNWPGGLEVRELR 94
                              CSKI  CV   LRES  C +  +W  G   REL+
Sbjct: 61  LLIRKLPFQRRLAKRTWWVCSKIPICVPSTLRESPSCPKTSSWLAGYGGRELK 113

[Close]

BLAST of Carg22616 vs. NCBI nr
Match: KAF6094087.1 (hypothetical protein HJG60_006075 [Phyllostomus discolor])

HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23
Identity = 70/113 (61.95%), Postives = 76/113 (67.26%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  -------------------CSKILTCVRFMLRESRLCLRIFNWPGGLEVRELR 94
                              C K L CV   LRES  C +  +W  G   REL+
Sbjct: 61  LLIRKLPFQRRRAKRTWWVCLKTLICVPSTLRESPSCPKTSSWLAGYGGRELK 113

[Close]

BLAST of Carg22616 vs. NCBI nr
Match: PWA66317.1 (RNA-directed DNA polymerase, eukaryota, Reverse transcriptase zinc-binding domain protein [Artemisia annua])

HSP 1 Score: 118.6 bits (296), Expect = 2.9e-23
Identity = 74/118 (62.71%), Postives = 81/118 (68.64%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60

Query: 61  ---------------CSKILTCVRFM------LRESR--LCLRIFNWPGGLEVRELRE 95
                               T +RF       L+E+R  LC +I +W GGL V+ LR+
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEARLLLCPKICSWLGGLGVKGLRD 118

[Close]

BLAST of Carg22616 vs. ExPASy Swiss-Prot
Match: P59226 (Histone H3.2 OS=Arabidopsis thaliana OX=3702 GN=HTR2 PE=1 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. ExPASy Swiss-Prot
Match: Q6LBE3 (Histone H3.2 OS=Asparagus officinalis OX=4686 PE=2 SV=3)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. ExPASy Swiss-Prot
Match: Q6LCK1 (Histone H3.2 OS=Brassica napus OX=3708 PE=2 SV=3)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. ExPASy Swiss-Prot
Match: Q71T45 (Histone H3.2 OS=Euphorbia esula OX=3993 GN=H3 PE=2 SV=3)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. ExPASy Swiss-Prot
Match: Q402E1 (Histone H3.2 OS=Lilium longiflorum OX=4690 GN=YAH3 PE=1 SV=3)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. ExPASy TrEMBL
Match: K7EP01 (Histone H3.3 OS=Homo sapiens OX=9606 GN=H3-3B PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.3e-25
Identity = 72/113 (63.72%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  -------------------CSKILTCVRFMLRESRLCLRIFNWPGGLEVRELR 94
                              CSKI TCV   LRES  C +  +W  G   REL+
Sbjct: 61  LLIRKLPFQRRLAKRTWWVCSKIPTCVPSTLRESPSCPKTSSWLAGYGERELK 113

[Close]

BLAST of Carg22616 vs. ExPASy TrEMBL
Match: A0A2J8KB34 (H3F3B isoform 11 OS=Pan troglodytes OX=9598 GN=CK820_G0039874 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.3e-25
Identity = 72/113 (63.72%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  -------------------CSKILTCVRFMLRESRLCLRIFNWPGGLEVRELR 94
                              CSKI TCV   LRES  C +  +W  G   REL+
Sbjct: 61  LLIRKLPFQRRLAKRTWWVCSKIPTCVPSTLRESPSCPKTSSWLAGYGGRELK 113

[Close]

BLAST of Carg22616 vs. ExPASy TrEMBL
Match: A0A2J8Y104 (H3F3B isoform 4 OS=Pongo abelii OX=9601 GN=CR201_G0021391 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-24
Identity = 71/113 (62.83%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  -------------------CSKILTCVRFMLRESRLCLRIFNWPGGLEVRELR 94
                              CSKI  CV   LRES  C +  +W  G   REL+
Sbjct: 61  LLIRKLPFQRRLAKRTWWVCSKIPICVPSTLRESPSCPKTSSWLAGYGGRELK 113

[Close]

BLAST of Carg22616 vs. ExPASy TrEMBL
Match: A0A665T2W2 (Histone domain-containing protein OS=Echeneis naucrates OX=173247 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.8e-24
Identity = 70/112 (62.50%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  ------------------CSKILTCVRFMLRESRLCLRIFNWPGGLEVRELR 94
                             CS+  TC     RES  C +  +WP     RELR
Sbjct: 61  LLIRKLPFQRPARLIWSACSRTPTCAPSTPRESPSCPKTSSWPAASAERELR 112

[Close]

BLAST of Carg22616 vs. ExPASy TrEMBL
Match: A0A3B5K558 (Histone domain-containing protein OS=Takifugu rubripes OX=31033 PE=3 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 3.7e-24
Identity = 70/112 (62.50%), Postives = 76/112 (67.86%), Query Frame = 0


Query: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSD- 60
           MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKS  
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 61  ------------------CSKILTCVRFMLRESRLCLRIFNWPGGLEVRELR 94
                             CS+  TC     R S  CL+  +WPG    REL+
Sbjct: 61  LLIRKLPFQRPARLIWWVCSRTPTCAPSTPRGSPSCLKTSSWPGVSVERELK 112

[Close]

BLAST of Carg22616 vs. TAIR 10
Match: AT1G09200.1 (Histone superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. TAIR 10
Match: AT3G27360.1 (Histone superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. TAIR 10
Match: AT5G10390.1 (Histone superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. TAIR 10
Match: AT5G10400.1 (Histone superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

[Close]

BLAST of Carg22616 vs. TAIR 10
Match: AT5G65360.1 (Histone superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0


Query: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 59
          MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 1  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 58

The following BLAST results are available for this feature:

BLAST of Carg22616 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013881.1	1.1e-43	100.00	histone H3.2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
PNI32233.1	8.9e-25	63.72	H3F3B isoform 11 [Pan troglodytes]	[more]
PNJ87933.1	4.4e-24	62.83	H3F3B isoform 4 [Pongo abelii]	[more]
KAF6094087.1	1.3e-23	61.95	hypothetical protein HJG60_006075 [Phyllostomus discolor]	[more]
PWA66317.1	2.9e-23	62.71	RNA-directed DNA polymerase, eukaryota, Reverse transcriptase zinc-binding domai...	[more]

BLAST of Carg22616 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59226	2.3e-23	100.00	Histone H3.2 OS=Arabidopsis thaliana OX=3702 GN=HTR2 PE=1 SV=2	[more]
Q6LBE3	2.3e-23	100.00	Histone H3.2 OS=Asparagus officinalis OX=4686 PE=2 SV=3	[more]
Q6LCK1	2.3e-23	100.00	Histone H3.2 OS=Brassica napus OX=3708 PE=2 SV=3	[more]
Q71T45	2.3e-23	100.00	Histone H3.2 OS=Euphorbia esula OX=3993 GN=H3 PE=2 SV=3	[more]
Q402E1	2.3e-23	100.00	Histone H3.2 OS=Lilium longiflorum OX=4690 GN=YAH3 PE=1 SV=3	[more]

BLAST of Carg22616 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
K7EP01	3.3e-25	63.72	Histone H3.3 OS=Homo sapiens OX=9606 GN=H3-3B PE=1 SV=1	[more]
A0A2J8KB34	4.3e-25	63.72	H3F3B isoform 11 OS=Pan troglodytes OX=9598 GN=CK820_G0039874 PE=3 SV=1	[more]
A0A2J8Y104	2.1e-24	62.83	H3F3B isoform 4 OS=Pongo abelii OX=9601 GN=CR201_G0021391 PE=3 SV=1	[more]
A0A665T2W2	2.8e-24	62.50	Histone domain-containing protein OS=Echeneis naucrates OX=173247 PE=3 SV=1	[more]
A0A3B5K558	3.7e-24	62.50	Histone domain-containing protein OS=Takifugu rubripes OX=31033 PE=3 SV=2	[more]

BLAST of Carg22616 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09200.1	1.6e-24	100.00	Histone superfamily protein	[more]
AT3G27360.1	1.6e-24	100.00	Histone superfamily protein	[more]
AT5G10390.1	1.6e-24	100.00	Histone superfamily protein	[more]
AT5G10400.1	1.6e-24	100.00	Histone superfamily protein	[more]
AT5G65360.1	1.6e-24	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 17..31 score: 92.32 coord: 34..55 score: 89.33 coord: 3..17 score: 97.1
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 1..59
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 15..21
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 1..64 e-value: 4.0E-12 score: 46.6
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 2..80 e-value: 1.6E-22 score: 81.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 2..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43
None	No IPR available	PANTHER	PTHR11426:SF198	SUBFAMILY NOT NAMED	coord: 1..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22616-RA	Carg22616-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000786	nucleosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity