Carg22603 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22603
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	classical arabinogalactan protein 1-like
Location	Carg_Chr17: 5200543 .. 5201049 (+)
RNA-Seq Expression	Carg22603
Synteny	Carg22603

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAATCCGTTGCTTTCTGTTGCCTTCTTTTGATGTTCGTTGCGGTGTTCATGGACGCCGCTTTCTCTTTGGAACAACCGGTGGAAGTTCCGCCTTCTCCATCTCCTGAATCTGCTGCAGATTCTCCTCCAGTGCCCTCCCCTACTCCATTCCCTCACGCTCCTGCTAGTTCTCCGGCGGAATCACCTTTAAAATCTCCTCCTGCGCCACCGCCCTCAGATCTCACTCCCAGTCCATCTCCAGCGCGTGTTCCATCTCCGTCTCCGGCTCCAGCCCCTTCACTCACTGCCGACAGTGATTTTCGTAACAGTATTGCCAATGGCGGTGGAGGAGAGACGGAAACTTCCAAGGGCGGGATGAATGGCGGTAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCTGCGTGTTTTGTGGGAGTAGGAGGAATCGTTTACAAGAAGCGCCAAGACAACATTCGCCGATCTCAGTTCGGGAATGCCGCTAGGTCATCGTTCCTATGA

mRNA sequence

ATGGCGAAATCCGTTGCTTTCTGTTGCCTTCTTTTGATGTTCGTTGCGGTGTTCATGGACGCCGCTTTCTCTTTGGAACAACCGGTGGAAGTTCCGCCTTCTCCATCTCCTGAATCTGCTGCAGATTCTCCTCCAGTGCCCTCCCCTACTCCATTCCCTCACGCTCCTGCTAGTTCTCCGGCGGAATCACCTTTAAAATCTCCTCCTGCGCCACCGCCCTCAGATCTCACTCCCAGTCCATCTCCAGCGCGTGTTCCATCTCCGTCTCCGGCTCCAGCCCCTTCACTCACTGCCGACAGTGATTTTCGTAACAGTATTGCCAATGGCGGTGGAGGAGAGACGGAAACTTCCAAGGGCGGGATGAATGGCGGTAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCTGCGTGTTTTGTGGGAGTAGGAGGAATCGTTTACAAGAAGCGCCAAGACAACATTCGCCGATCTCAGTTCGGGAATGCCGCTAGGTCATCGTTCCTATGA

Coding sequence (CDS)

ATGGCGAAATCCGTTGCTTTCTGTTGCCTTCTTTTGATGTTCGTTGCGGTGTTCATGGACGCCGCTTTCTCTTTGGAACAACCGGTGGAAGTTCCGCCTTCTCCATCTCCTGAATCTGCTGCAGATTCTCCTCCAGTGCCCTCCCCTACTCCATTCCCTCACGCTCCTGCTAGTTCTCCGGCGGAATCACCTTTAAAATCTCCTCCTGCGCCACCGCCCTCAGATCTCACTCCCAGTCCATCTCCAGCGCGTGTTCCATCTCCGTCTCCGGCTCCAGCCCCTTCACTCACTGCCGACAGTGATTTTCGTAACAGTATTGCCAATGGCGGTGGAGGAGAGACGGAAACTTCCAAGGGCGGGATGAATGGCGGTAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCTGCGTGTTTTGTGGGAGTAGGAGGAATCGTTTACAAGAAGCGCCAAGACAACATTCGCCGATCTCAGTTCGGGAATGCCGCTAGGTCATCGTTCCTATGA

Protein sequence

MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSPAESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGGMNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL

Homology

[Close]

BLAST of Carg22603 vs. NCBI nr
Match: KAG6605547.1 (hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013894.1 hypothetical protein SDJN02_24063, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.8 bits (769), Expect = 7.2e-78
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
           AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Carg22603 vs. NCBI nr
Match: XP_022995398.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 3.6e-77
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
           AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETE SKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETEASKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVG+GGIVYKKRQDNIRRSQFGNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Carg22603 vs. NCBI nr
Match: XP_023534499.1 (alpha carbonic anhydrase 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAKSVAF CLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP
Sbjct: 1   MAKSVAFYCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
           AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Carg22603 vs. NCBI nr
Match: XP_022958106.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita moschata])

HSP 1 Score: 295.4 bits (755), Expect = 3.0e-76
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
           AESPLKSPPAPP SDLTP PSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG
Sbjct: 61  AESPLKSPPAPPRSDLTPCPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Carg22603 vs. NCBI nr
Match: XP_023513399.1 (classical arabinogalactan protein 2-like [Cucurbita pepo subsp. pepo] >XP_023513400.1 classical arabinogalactan protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.4 bits (581), Expect = 4.6e-56
Identity = 133/168 (79.17%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAK +A+CC LL+     M+ AFSLEQ  +VPPSPSPESAA+ PP+ SPTPFPHAP SSP
Sbjct: 1   MAKFIAYCCCLLL-----MNVAFSLEQTEKVPPSPSPESAANFPPLSSPTPFPHAPVSSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
            ESPL SPPAPPPSDL PSPSPAR PSPS  PAPS  ADSDFRNSI+N GG E+E+SKGG
Sbjct: 61  VESPLHSPPAPPPSDLVPSPSPARGPSPSLNPAPSPAADSDFRNSISNNGGEESESSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVG+GGIVYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 163

[Close]

BLAST of Carg22603 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04
Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 28  PVEVPPSPSPESAADSPPVPSPTPFPHAPASSPAESPLKSP-PAPPPSDLTPSPSPARVP 87
           P  VPPSP+P S A SPP   P+P P  P+ SP+ SP  SP P+P PS   PSPSP+ +P
Sbjct: 318 PAPVPPSPAPPSPAPSPP---PSPAPPTPSPSPSPSPSPSPSPSPSPS---PSPSPSPIP 377

Query: 88  SPSPAPAPSLTA 99
           SPSP P+PS  A
Sbjct: 378 SPSPKPSPSPVA 383

[Close]

BLAST of Carg22603 vs. ExPASy TrEMBL
Match: A0A6J1K7T9 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111490958 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
           AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETE SKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETEASKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVG+GGIVYKKRQDNIRRSQFGNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Carg22603 vs. ExPASy TrEMBL
Match: A0A6J1H149 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111459430 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 166/168 (98.81%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
           AESPLKSPPAPP SDLTP PSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG
Sbjct: 61  AESPLKSPPAPPRSDLTPCPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Carg22603 vs. ExPASy TrEMBL
Match: A0A6J1FYT3 (alpha carbonic anhydrase 8-like OS=Cucurbita moschata OX=3662 GN=LOC111449065 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.9e-56
Identity = 134/168 (79.76%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAK +AFCC LL+     M+ AFSLEQ  EVPPSP PESAA  PP+ SPTPFPHAPASSP
Sbjct: 1   MAKFIAFCCCLLL-----MNVAFSLEQTEEVPPSPPPESAASFPPLLSPTPFPHAPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
            ESPL SPPAPPPSDL PSPSPAR PSPS  PAPS  AD DFRNSI+N GG E+E+SKGG
Sbjct: 61  VESPLHSPPAPPPSDLVPSPSPARGPSPSLNPAPSPAADGDFRNSISNNGGEESESSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVG+GGIVYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 163

[Close]

BLAST of Carg22603 vs. ExPASy TrEMBL
Match: A0A6J1JA87 (proline-rich receptor-like protein kinase PERK12 OS=Cucurbita maxima OX=3661 GN=LOC111483972 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 9.3e-55
Identity = 131/168 (77.98%), Postives = 141/168 (83.93%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAK +AFCC LL+     M+ AFSLEQ  EVPPS  PESA   PP+ SP PFPH PASSP
Sbjct: 1   MAKFIAFCCCLLL-----MNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
            ESPL SPPAPPPSDL PSPSPARVPSPSP  AP+  ADSDFRNSI+N GG E+E+SKGG
Sbjct: 61  VESPLHSPPAPPPSDLVPSPSPARVPSPSPNLAPTPAADSDFRNSISNNGGVESESSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAAACFVG+GGIVYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 163

[Close]

BLAST of Carg22603 vs. ExPASy TrEMBL
Match: A0A5D3CV84 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00190 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.6e-46
Identity = 115/168 (68.45%), Postives = 138/168 (82.14%), Query Frame = 0


Query: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60
           MAK++   CLL +F+++F++ +FSLE   ++PPS SP    +SPP+PSPTPFP+ PASSP
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSP---VNSPPLPSPTPFPNVPASSP 60

Query: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120
           AESPL SPPAPPPSDL P+PSPA V SP+P P+ SL ADSD  N  + GGG ++E SKGG
Sbjct: 61  AESPLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGG 120

Query: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 169
           MNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+G+AARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of Carg22603 vs. TAIR 10
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-15
Identity = 72/148 (48.65%), Postives = 90/148 (60.81%), Query Frame = 0


Query: 33  PSPSPESAADSPPVPSPTPFPHAPASSPAESPLK-SPPAPPPSDLTPSPSPARVPSPSP- 92
           P+PSP+  ADSP + +  P      +SPAESP++ S P  P ++ +PSPSPA  PS SP 
Sbjct: 27  PAPSPD-LADSPLIHASPPSKLGSHNSPAESPIEYSSPPEPETEHSPSPSPANSPSVSPP 86

Query: 93  ------------APAPSLTADSDFRNSIANGGGGE--TETSKGGMNGGKKAGIAVGVIAA 152
                       +P+PS  A SD  +S   G  GE     S GGM+GGKK G+A G IAA
Sbjct: 87  LPNDSQSPSSSASPSPSPEA-SDVNHSDITGIEGEKLPSGSGGGMSGGKKVGVAFGAIAA 146

Query: 153 ACFVGVGGIVYKKRQDNIRRSQFGNAAR 165
            C VGV G VYKKRQ+NIRRS++G AAR
Sbjct: 147 VCVVGVAGFVYKKRQENIRRSRYGYAAR 172

[Close]

BLAST of Carg22603 vs. TAIR 10
Match: AT2G28440.1 (proline-rich family protein )

HSP 1 Score: 58.5 bits (140), Expect = 5.8e-09
Identity = 57/144 (39.58%), Postives = 74/144 (51.39%), Query Frame = 0


Query: 28  PVEVPPSPSPESAADSPPVPSPTPFPHAPASSPAESPLKSPPAPPPSDLTPSPSPARVPS 87
           P     SP PES ADSP  P P P P +P SSP+       PAP   D    P P     
Sbjct: 128 PQSPASSPKPESLADSPSPPPPPPQPESP-SSPSYPEPAPVPAPSDDDSDDDPEPETEYF 187

Query: 88  PSPAPAPSLTADSDFRNSIANGGGGETETSKG---GMNGGKKAGIAVGVIAAACFVGVGG 147
           PSPAP+P L    D + S  +  G E    +G   GM+G +KAGIA+G I     + +G 
Sbjct: 188 PSPAPSPELGMAQDIKAS--DAAGEELNDERGEDYGMSGLEKAGIAIGTILGVGAIVIGA 247

Query: 148 IVYKKRQDNIRRSQFGNAARSSFL 169
           +VYKKR+DN+ R+++       FL
Sbjct: 248 LVYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of Carg22603 vs. TAIR 10
Match: AT5G60630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 9.3e-07
Identity = 46/100 (46.00%), Postives = 56/100 (56.00%), Query Frame = 0


Query: 72  PPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGGMN---GGKKAG 131
           P S+   SPSP          +  LT  +D   + +   GGE E S GG N   GGKK G
Sbjct: 41  PQSETEMSPSPTMSNDYDYPSSSQLTESNDLNYTDSTRPGGE-EASVGGENGGGGGKKTG 100

Query: 132 IA-VGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSF 168
           IA VG IAAA  VG GG V KKR++NIRRS++G A+   F
Sbjct: 101 IAVVGSIAAASMVGFGGYVLKKRRENIRRSRYGYASTEFF 139

The following BLAST results are available for this feature:

BLAST of Carg22603 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605547.1	7.2e-78	100.00	hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022995398.1	3.6e-77	98.81	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]
XP_023534499.1	1.4e-76	99.40	alpha carbonic anhydrase 8-like [Cucurbita pepo subsp. pepo]	[more]
XP_022958106.1	3.0e-76	98.81	lysine-rich arabinogalactan protein 18-like [Cucurbita moschata]	[more]
XP_023513399.1	4.6e-56	79.17	classical arabinogalactan protein 2-like [Cucurbita pepo subsp. pepo] >XP_023513...	[more]

BLAST of Carg22603 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPQ6	3.2e-04	55.56	Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=...	[more]

BLAST of Carg22603 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7T9	1.7e-77	98.81	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H149	1.5e-76	98.81	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1FYT3	2.9e-56	79.76	alpha carbonic anhydrase 8-like OS=Cucurbita moschata OX=3662 GN=LOC111449065 PE...	[more]
A0A6J1JA87	9.3e-55	77.98	proline-rich receptor-like protein kinase PERK12 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A5D3CV84	1.6e-46	68.45	Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo var....	[more]

BLAST of Carg22603 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45230.1	2.4e-15	48.65	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	5.8e-09	39.58	proline-rich family protein	[more]
AT5G60630.1	9.3e-07	46.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..121
None	No IPR available	PANTHER	PTHR36721:SF5	PROTEIN, PUTATIVE-RELATED	coord: 4..168
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 4..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22603-RA	Carg22603-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity