Carg22597 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACCGTCGGCGTCCTAGCATTGCAGGGATCTTATAACGAGCACATCGCAGGCATTTTCTCCTCCTCCTCCTCCTTCTTCTCTATCGCTAGCTCCATCTGTAATAGGCGTTTCTACGGATATTTCATTTCATTTCATTTCATTTCGTTATCTTTTTCTTATTACGAGTTTTCGGCCTTAATTGATTGTGGGGCGCAGCTTTGAGAAGGCTCGGAGTGAAGAGCGTAGAGATAAAGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCAGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGGTTTGTTCCTCTTATATTTAGACGTTGCTACAACTGTATTCGTCTTTAAAGATTTTCTTTAGTTTGGCCGAAATACATGAAGAGCGAACCTGTGAGTAAGGGGAAAAGTTGTAAGATCTTGCATTCAATCGTGAACCAAACAGAAATGTAATCTTTAATTTAAAATTTGTTGAACGCTATTTTTCCGGGTTAGACATACTAACATCCCAAATGTATGAAACGATCGTCTGTGTAAGTTTGGATTGGTTAATTTCTGATAATAGATAGAATTAAAATCGAGTATGGTACTTATATTGTGGTATTTTTGTGTAATGCAGTTTCCCTCTCTGCGAGAGTTTGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCGGGGCTTATCTTTTTGGCAAACAAAGCTACTGGTAGACTTCCTTCCATTTTCCCTCAATAAAATGCTTGAAATGTGTTTCAAACTTGATTGGATACAGTATATACATGTATTTTCAGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACAGTTCACAGAAACTTCTTTGGCAGTCAGGTAAATCTGGTTTCTCATGTTGGGTTGTGCTATCAAAATGGATGAGCAATATCTGGTAAACAAAAGAACCTTGGGAATTAGTACTGAACATGCATAGGATATTAGGAATCAAAATGACTTTGTATCAACTCAAATAATGACTTTGTCCCATAAAAAACTCACGTACTTGGTCTAGATCCTCCGTGTGATAAGCATCATGAGAACCGGTAAAATGAAGTTTGTGAGAACGAGCGCCAACGTAAACGCTGGGCCTCGAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAATCATTCTTTATAAGGGTGTGAAAACCTCTCTCTAGCAGCTCGTTTTAAAAACCTTGAGGGTAGTTGAAGTGTGGAATTAATCGTCGATGGTTTTTGTTGTACATAAGCTGATCCAAACACCGTTATCCAATGAATTTCTGCTTAGATTTTGTTTCCGAATGTTCAGTTTCTTTTCCTGAATACCAGTATTACTAAAAAGTATAGCAAGCCCCTTTAACAAGATGTTGAAGTTGGCTTTATTTTCACTGTCAATTTCTTGAGTTCAGATTTTCCTAATTTAAGATCATGATTATCTAGCTTCAAAGCTTCGAAACGGAGCTATCAATTCCAGAGCTCGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGATGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTACCTGGCATTCAAATTCTACCTGGCATTCAAATTCTTCTGGTGAAGACAAAGAGGTTTGTTGTTGTTTACTTTCCTCATTCCTAGATCTCGTATGATCTATACACTGATATTGCCACTAATTTGTACGTCTAAATGATTGTTATCTGTATACATGAGGCAAAAGTTTCAGACCATAAGCTCATCTGTCTTGTGAGATCTCACCGGTTGGGGAGGAGAACAAATCATTCTTTAGAAAGGTGTCGAAACCTCTCACTAACAGACGCATTTTAAAAACCTTGAGGAGAGCCCGAAAGGGAAAGCCCAAATAGTACATCTGTTAGTGGTGGAATTTGGCTGTTACAAATGGTATCTGTGCCAAGTTTCGATCCTAGGACCTATGGCCTATGGGTTTGGGCTGTTACATGTCTCCACTGGAGTTTGCTTTTGTGTTCGTTTTCCTCCTATCCCTTGACACTGCGGTTTGAGTATCTCAGGAAAAAGGTACAGAAGACAAAGTGATTGTAGCAGTCAGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGTATAGTGTAGTTTTACCTTGAAATACATCACTTAATATTATGATGATCCATCTCAATTGAGTTTATAACCATGAATTATGCAGGCACAGTTACTTTCTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGATTCGAACGATCGAACATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTCAACTCAGTTTTACATTTTTCAAGTGTCATTGCAGGTTCAATCTCTTATCTATTCTGTAATTTGCACCATGCTTTATCCTCCTTATAGGAGATGCTTCACCAAAGTATTCACTTTTACGACGCATTAATTTAAAGAATAATATCTGAATTATA ATGGCGACCGTCGGCAGCGTAGAGATAAAGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCAGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGTTTCCCTCTCTGCGAGAGTTTGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCGGGGCTTATCTTTTTGGCAAACAAAGCTACTGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACAGTTCACAGAAACTTCTTTGGCAGTCAGCTTCAAAGCTTCGAAACGGAGCTATCAATTCCAGAGCTCGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGATGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTACCTGGCATTCAAATTCTACCTGGCATTCAAATTCTTCTGGTGAAGACAAAGAGGAAAAAGGTACAGAAGACAAAGTGATTGTAGCAGTCAGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGCACAGTTACTTTCTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGATTCGAACGATCGAACATCGACCTTCCGATTTTTCTTTAGCTTAAACCAAATGAACCCCTCCTCAACTCAGTTTTACATTTTTCAAGTGTCATTGCAGGTTCAATCTCTTATCTATTCTGTAATTTGCACCATGCTTTATCCTCCTTATAGGAGATGCTTCACCAAAGTATTCACTTTTACGACGCATTAATTTAAAGAATAATATCTGAATTATA ATGGCGACCGTCGGCAGCGTAGAGATAAAGAAGCCCGAGCAGCTTCTTGATGTAGCTTCTCTGATTATTCCAGGAGGGGAAAGCACCACCATGGCCAAACTGGCGGAGCTCCATAATTTGTTTCCCTCTCTGCGAGAGTTTGTCAGAATGGGGAAGCCTGTCTGGGGCACCTGTGCGGGGCTTATCTTTTTGGCAAACAAAGCTACTGGACAGAAAACCGGTGGACAGGAGCTTGTTGGAGGGCTGGATTGTACAGTTCACAGAAACTTCTTTGGCAGTCAGCTTCAAAGCTTCGAAACGGAGCTATCAATTCCAGAGCTCGTGTCCACGGAAGGCGGTCCAGAAACATTCCGTGGAGTTTTCATCCGAGCTCCTGCAATTCTTGATGTGGGGCCAGAAGTACAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTACCTGGCATTCAAATTCTACCTGGCATTCAAATTCTTCTGGTGAAGACAAAGAGGAAAAAGGTACAGAAGACAAAGTGATTGTAGCAGTCAGGCAAGGGAACTTGCTCGCAACTGCCTTCCATCCCGAACTAACATCAGATAATAGATGGCACAGTTACTTTCTGAAGATGGCTGGTGATGTTGAAGGATCTTCAAGTAGCATAGCAAGCATAGGAGTTGACAATTCGAGATTCGAACGATCGAACATCGACCTTCCGATTTTTCTTTAG MATVGSVEIKKPEQLLDVASLIIPGGESTTMAKLAELHNLFPSLREFVRMGKPVWGTCAGLIFLANKATGQKTGGQELVGGLDCTVHRNFFGSQLQSFETELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTWHSNSTWHSNSSGEDKEEKGTEDKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGDVEGSSSSIASIGVDNSRFERSNIDLPIFL Homology
BLAST of Carg22597 vs. NCBI nr
Match: KAG7013900.1 (putative pyridoxal 5'-phosphate synthase subunit PDX2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 474.2 bits (1219), Expect = 6.7e-130 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Carg22597 vs. NCBI nr
Match: KAG6605542.1 (putative pyridoxal 5'-phosphate synthase subunit PDX2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 466.1 bits (1198), Expect = 1.8e-127 Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0
BLAST of Carg22597 vs. NCBI nr
Match: XP_023534477.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 433.7 bits (1114), Expect = 1.0e-117 Identity = 221/232 (95.26%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of Carg22597 vs. NCBI nr
Match: XP_023534476.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 433.7 bits (1114), Expect = 1.0e-117 Identity = 221/232 (95.26%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of Carg22597 vs. NCBI nr
Match: XP_022958104.1 (probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 432.2 bits (1110), Expect = 2.9e-117 Identity = 220/232 (94.83%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy Swiss-Prot
Match: Q8LAD0 (Probable pyridoxal 5'-phosphate synthase subunit PDX2 OS=Arabidopsis thaliana OX=3702 GN=PDX2 PE=1 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 2.6e-84 Identity = 158/236 (66.95%), Postives = 188/236 (79.66%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy Swiss-Prot
Match: Q54J48 (Probable pyridoxal 5'-phosphate synthase subunit pdx2 OS=Dictyostelium discoideum OX=44689 GN=pdx2 PE=1 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 6.2e-38 Identity = 85/206 (41.26%), Postives = 125/206 (60.68%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy Swiss-Prot
Match: Q6AFB8 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Leifsonia xyli subsp. xyli (strain CTCB07) OX=281090 GN=pdxT PE=3 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 7.6e-36 Identity = 88/196 (44.90%), Postives = 106/196 (54.08%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy Swiss-Prot
Match: Q81ZV5 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=pdxT PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.2e-35 Identity = 87/196 (44.39%), Postives = 113/196 (57.65%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy Swiss-Prot
Match: B1W3G0 (Pyridoxal 5'-phosphate synthase subunit PdxT OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) OX=455632 GN=pdxT PE=3 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 2.9e-35 Identity = 90/195 (46.15%), Postives = 113/195 (57.95%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy TrEMBL
Match: A0A6J1H447 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111459428 PE=3 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 1.4e-117 Identity = 220/232 (94.83%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy TrEMBL
Match: A0A6J1H276 (Glutaminase OS=Cucurbita moschata OX=3662 GN=LOC111459428 PE=3 SV=1) HSP 1 Score: 432.2 bits (1110), Expect = 1.4e-117 Identity = 220/232 (94.83%), Postives = 221/232 (95.26%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy TrEMBL
Match: A0A6J1CIP7 (Glutaminase OS=Momordica charantia OX=3673 GN=LOC111011333 PE=3 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109 Identity = 204/232 (87.93%), Postives = 215/232 (92.67%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy TrEMBL
Match: A0A5D3CR96 (Glutaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00240 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 1.0e-107 Identity = 202/232 (87.07%), Postives = 213/232 (91.81%), Query Frame = 0
BLAST of Carg22597 vs. ExPASy TrEMBL
Match: A0A1S3CLW1 (Glutaminase OS=Cucumis melo OX=3656 GN=LOC103501941 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 1.0e-107 Identity = 202/232 (87.07%), Postives = 213/232 (91.81%), Query Frame = 0
BLAST of Carg22597 vs. TAIR 10
Match: AT5G60540.1 (pyridoxine biosynthesis 2 ) HSP 1 Score: 313.2 bits (801), Expect = 1.8e-85 Identity = 158/236 (66.95%), Postives = 188/236 (79.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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