Carg22470 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22470
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein cornichon homolog 1-like isoform X1
Location	Carg_Chr03: 1016548 .. 1021181 (-)
RNA-Seq Expression	Carg22470
Synteny	Carg22470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATTTCCTGAAGCTGAGCAGTTGCAGAGATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGGTGCGTTCTTTCTAATCTCATGAACCCTAGTTTCGGAATTAACTATCTTTATAATAGGTTAAGTTGCTGTTTGGTTTCCAAGGAAGTCTTAAATGCGTCTGCTGAAACGTAGCCCGAATGTTCTTCTTCTTGTTGTTGTGTAATCCTGTGGTAGCTTATTCAGTAAGGAGTGGAGGTTTGATGCGTATCTGAGATTCGTTTTGCTGCGACAGAGCATTTGGACCTCAATTTGATTTACGTCTAGACTTCGCCTATATTCTGATTGATGGAACCTTTACACTTTCTCTCGACCTGAAATGGATTTATGACTTCGTTCCATTTCACCGTTTTCTCTTGCTTTCTTAACCAATCAGTAGAGTAGTCTATTTTACGGTGATGAATCTTGGTCATTTCCTTTTGCATCCGAGTTTACAATGTAATTTTACCTTGTTAAGTGTTCTTGTAGTCTTTAGAGACGTGGCTGTATGTATATCTTGTGGGGATGAACGATAATAAATGTATTTCAACTAGAAAACTGACTTCTATTAGTATAGTTGATACCTTGTTTCTTGTTTCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGGAAAAAAATTGGTCCCAATGTTCCTGTATATCTTGTGGGGATGAACGATAGTAAATGAATTTCAACTAGAAAACTGACTTCTATTCGTATAGTTGATACCCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGAAATAAAATTGGTCCGAAAGTTCCTGCGGGTTATTTCTGGGTCACCAGTTAATTGTTGGCTATGCTCCCATTTCATTTAATACGTTCATGTACAATGGCAGGAGGAGAGAAGTGACTGCTCTTATTTTCTATGAACTATGATAATTTCTTCTTGTTATTGCTTTATATGTTCTTTATGGACTTGATGACTATTTAGAGTTTCCATTTATAGATCAATATCACTAGCCATTGTAAAGAGTACTATTAATTGTCTAGGAACATTTGTACTTCATATTGGAAGCATCTAATGGTTGTGGTTGGTCTTTTTGTAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCTTAATACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTAAGTATTTCTTGACATTAATATGAAGCATGATTTATTTTTCCTTATGCTTTGTGTAATGTATGAGGTATAATGCTGGTGTTTCTTTGTTACGTATGATACCCCTTTATTGTCTAAAGTGTTATGGATGCCAATATGAATATAACTCAATGAGTTAAAGACATTATACTCTCGATCAAGAGGTCAAAGGTTTGAATTCTCCCACCCTCACGTTTTTGTACTCTCTAAGGTGTTATAGAGGAGGCTTATGATGTTCTTTACTTGTAAAGCGGATCTAGCTTGCACTCATATTTATGTACTTTTTTCTTTTGTCATGGAAAAAAGATTATATATACTTCTTAATTTGTCAATATGTTTTGTTTTATTATTAAGCACAGTATTCTTAGAGATGCAAACATGTGAAAACTAGTTGGAAGGCTTAAGAACATCAAATAGTTTCTCTCTGAAGTTGAGATGGTCATTTCTAGAATGATTGAACTGTAGATAGCTATAATTGTCAAATTAACTTTTGGTAATAGTTCTCCCTCTGTATGAGGGATTAGTGCATTTCGGCATTTTCTGATGCTTTTGGGGAGTATTAGAGCCAGGAGGAGCTTATAATTTTAGATAATCAATGATTAGTGTTTCTGGTGGCACAATGAGCTCATAAGCTGAGATTTACAGTTCATAATTTCAATTTTATCTGGTCTATGGCTCCTGCTGGTATGGTTTTTAAATTGATTTTCATCGTCTCCCTTTATTGGGCTGCTTCCATGTTTTTCAATATGAAAAATGAGGAAAAGCAGTTGTTAGATCCCTCAAGCAAATGTTAATGACTTATGTGGAGTACTCTCTATTGTAGTGTTCTCTCTGTACTTATTTTGTTTTGAACTAACTTCTAAAGTTGAGTATCTAGCGACTTGGGTGGTATAGCCACCTCTTTAGCAGTAAGCGTGAAGAAAAGATTTACGAGATAAACGTCCTGACTCAAGCAACTAAAATCTAGAATCGATTAGGCTAAACGATATCCAACTTGGTTGGAATGGATAACCATTCGTCCACATCTTTGTCATGGTAATACCTTTTGAAATTGAGCATTCACTCACCTAGATCATAATGAGTTGATGATTGCATATTGAACGGATCTTATTGACTAAAGCACTGAAAGTAAACATTTTTTTTTTTTCATATATTACTTTTTCATCAATATAAAAGATAAAGGTATAGAAAAAAATGTTGAGGCTGGCCAAGACTAAGTACCAATGTATAACTAAACTTGGCTTGGATAGAATAGTGGTTTACAACTATGATGTTTGACGACGAATAAAAGAGATACGAGTAGATATATAGAAAATAGAAGATCAACTAAGTATCGCACTCTTGGAGATTGTGAACAATACAACGGAAAATTTTGTTGCACCACACTGATGTCCAAAGAAATATAAATAAATACAGATGCTTTAACAGTTAAATGATAACTTATGTAATTTCATTCTGATAAGGGAGTAGCGCATGCTTGTTTTTGGTTACTTTTGTTGTAATTACTATCAACTTCCAAAAGGACTCTGTATTCTAGATTCTTGATGAACCAATTATCCTGGTGCCTATTGTTGCTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTAACATTCTTATTCCATGTAGCTATTCCAGTAATATACTGAAATTTAATTCCATTAGATATGTTCTCTGTCGACTGAACTACACCAACTTATTGTTTGAATCTTAGATGCTTTAAAAAGTATAATTGATTTTCAGTGATGGCTTGAAACTAATGCTGATCTTCTTAAAGAATAAAACTAGAGTTTTCAAATGTATGATATCCTATTGTTTGAGGATCCTGCAAATATGTTTTTAATAGATTCTCAGTGATGGATAGACGTCTACTGCTGATATTTTTTAGAAATAAAACCAAAATTTTCTAGATGAAAGTTTCTATTCCACTAGTTGGACCGAGAATTTTCAAGCATTTCCCCATTTTTGTGTGTATATGATGTATATTATCCGGTTACAATGTCCCAGGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGGTAAGTCTGCAATTTCATTGTTTCTCTCCTCTAAACTATTTAGAAAGTGGTATCCTTTCTGATTGAAGTTTCCTTGTTTTCTGTATAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAGAGTATTTATTTCACCATTTAGCTCGAAGTTGAATCCATCATCTGTTTTAAAATTCGTATATGATTACATGAGAAATTATCTACTCTTTTATTCATTGCAAAGTTCTTAAATATAATGCTGTTGCACTGATTTTGATACTGTTATGTTGGTTTTGGAAGCTGTATACCATGAGTATCTGTTGCCTTGGCGCCAGTATGTTGTTAATAACGCATGGCTCCAGGATCTTGAACTTTGTTCTGCTAGCAAATCTTGCTTCTTTCTAGCTTTTGCTGGTCCTGTATGTGCGCTATAAATTAAGTTAGAATGTTCAATAGCTCTTCATATATTAAAGATGTAGCTTTCTGTAGCTTTATGGATGACTCCCATGCTTTTGACATCTGGTACATGCGCACTTGCATACACACGATTATCCGTTATGTATCGTGGATTCATTTCGTCTTAACGATAAAGATAAAGCACGAACATGGACATTATTCATTCTGAATTTCACCTGTCATACTAGCATTCTTACATGTATTAAATTACCATGAACTGCAGGCTTACTTTGTCTGCTTTCAACTCTTTATCTGATGAAGATGACGTCCTACATTTATTTTGATCGCCACTCTTATTAGTTCGTATTACGGGTCTAAAGCATGTCTAGTCGATATTTGTATGGGAGATACGTTATTTGTATGGGAGATACATGGAGGAAACGAATTTGGACTTGGCAACTTCAAACACATTCAAACAGGTTTTTCCTCCCATTCCCATCCATTGGCTTGGTAGGCTCCATTGCAATGTCAGTTCATATGTTCTCCAATTAAAAATGTTGTTATTGTCGAATGAATTTTAGCCTTATAGGCAGTTATGATTGTCAATTTTAGCATTTTTCTTCTTTTTGCGATTACATGGATTATACCGAATTGCACTTTAGGGTCTCATATTTGCACAGTTTTGGAATATCAACTAGTTTCAATTTGAAGTATTCTCGTAAGGATTCAAAGAA

mRNA sequence

TGAATTTCCTGAAGCTGAGCAGTTGCAGAGATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCTTAATACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAGAGTATTTATTTCACCATTTAGCTCGAAGTTGAATCCATCATCTGTTTTAAAATTCGTATATGATTACATGAGAAATTATCTACTCTTTTATTCATTGCAAAGTTCTTAAATATAATGCTGTTGCACTGATTTTGATACTGTTATGTTGGTTTTGGAAGCTGTATACCATGAGTATCTGTTGCCTTGGCGCCAGTATGTTGTTAATAACGCATGGCTCCAGGATCTTGAACTTTGTTCTGCTAGCAAATCTTGCTTCTTTCTAGCTTTTGCTGGTCCTGTATGTGCGCTATAAATTAAGTTAGAATGTTCAATAGCTCTTCATATATTAAAGATGTAGCTTTCTGTAGCTTTATGGATGACTCCCATGCTTTTGACATCTGGTACATGCGCACTTGCATACACACGATTATCCGTTATGTATCGTGGATTCATTTCGTCTTAACGATAAAGATAAAGCACGAACATGGACATTATTCATTCTGAATTTCACCTGTCATACTAGCATTCTTACATGTATTAAATTACCATGAACTGCAGGCTTACTTTGTCTGCTTTCAACTCTTTATCTGATGAAGATGACGTCCTACATTTATTTTGATCGCCACTCTTATTAGTTCGTATTACGGGTCTAAAGCATGTCTAGTCGATATTTGTATGGGAGATACGTTATTTGTATGGGAGATACATGGAGGAAACGAATTTGGACTTGGCAACTTCAAACACATTCAAACAGGTTTTTCCTCCCATTCCCATCCATTGGCTTGGTAGGCTCCATTGCAATGTCAGTTCATATGTTCTCCAATTAAAAATGTTGTTATTGTCGAATGAATTTTAGCCTTATAGGCAGTTATGATTGTCAATTTTAGCATTTTTCTTCTTTTTGCGATTACATGGATTATACCGAATTGCACTTTAGGGTCTCATATTTGCACAGTTTTGGAATATCAACTAGTTTCAATTTGAAGTATTCTCGTAAGGATTCAAAGAA

Coding sequence (CDS)

ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCTTAATACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAG

Protein sequence

MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF

Homology

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BLAST of Carg22470 vs. NCBI nr
Match: KAG7033543.1 (Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294.7 bits (753), Expect = 4.7e-76
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

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BLAST of Carg22470 vs. NCBI nr
Match: XP_022967916.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFL+QGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

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BLAST of Carg22470 vs. NCBI nr
Match: XP_022928680.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 Protein cornichon-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF++QGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

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BLAST of Carg22470 vs. NCBI nr
Match: XP_023543605.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.2 bits (744), Expect = 5.3e-75
Identity = 151/154 (98.05%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAW+LIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF++QGVF
Sbjct: 1   MAWDLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

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BLAST of Carg22470 vs. NCBI nr
Match: XP_022925064.1 (protein cornichon homolog 1-like isoform X2 [Cucurbita moschata] >XP_022966480.1 protein cornichon homolog 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 284.6 bits (727), Expect = 4.9e-73
Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAW+LIFWF+SFCIN+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFL+QG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+TLKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

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BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-32
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAW+L  W +SF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEF++QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           C LFL T HW  FL+ VPV+ YH  L+ ++ +LIDVTEVFR +  EK  R  KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDD 145
           F++V+FR+ + A    V+    DD
Sbjct: 121 FIMVVFRLTLSA----VYSFTEDD 140

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BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.2e-25
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSLFLFT 67
           W ISF   +AL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF++QGV C  +L T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFR 127
           GHWFM L+ +P   Y+ +L+ K++HL+DVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 IIMVA 133
           +I  A
Sbjct: 127 MIYSA 131

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BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSLFLFT 67
           W ISF I + LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFR 127
           GHWFM L+ VP   Y+ +L+ +K+HLIDVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 II 130
           +I
Sbjct: 127 LI 128

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BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21
Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSLFLFTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF++QGV C  +L TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 133
              Y+ +L+ K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20
Identity = 54/126 (42.86%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 4   NLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSL 63
           +L+ W ISF     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QG+ C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLV 123
           ++ TGHWFM ++++P   Y+I L++K+EHL DVTE++ T K E+  R+ K+    L   +
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRII 130
             + +I
Sbjct: 123 TTYWLI 128

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BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A6J1HTE7 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467288 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.0e-76
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFL+QGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A6J1ESA6 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435524 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.7e-76
Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEF++QGVF
Sbjct: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFVVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 154

[Close]

BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A6J1HRR4 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466123 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73
Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAW+LIFWF+SFCIN+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFL+QG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+TLKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A6J1EB17 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432423 PE=3 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73
Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAW+LIFWF+SFCIN+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFL+QG+F
Sbjct: 1   MAWSLIFWFVSFCINIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVVPEFLVQGLF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPVSCYHINLFLK+EHLIDVTEVF+TLKREKYFR AKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKREHLIDVTEVFKTLKREKYFRFAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FLVVIFRIIMVAGMKSVFDSAP+DIDIRSTVLEF
Sbjct: 121 FLVVIFRIIMVAGMKSVFDSAPEDIDIRSTVLEF 154

[Close]

BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A1S3B5Z0 (protein cornichon homolog 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486176 PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.7e-72
Identity = 142/154 (92.21%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAWNLIFWFISFC N+ALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLV+PEFL+QGVF
Sbjct: 1   MAWNLIFWFISFCFNIALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVLPEFLVQGVF 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           CSLFLFTGHWFMFLITVPV+CYHINLFLK+EHLIDVTEVFR LKREKYFRLAKLIFYLLL
Sbjct: 61  CSLFLFTGHWFMFLITVPVTCYHINLFLKREHLIDVTEVFRALKREKYFRLAKLIFYLLL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF 155
           FL+VIFRIIMVA MKSVFDSAP+DIDIRS+VLE+
Sbjct: 121 FLIVIFRIIMVAEMKSVFDSAPEDIDIRSSVLEY 154

[Close]

BLAST of Carg22470 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein )

HSP 1 Score: 141.0 bits (354), Expect = 8.2e-34
Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 1   MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVF 60
           MAW+L  W +SF +++AL+   FYQ++ LTDLEADYLN +++S+RIN+LVIPEF++QG  
Sbjct: 1   MAWDLFLWIVSFFVSLALVASVFYQVICLTDLEADYLNPFETSTRINRLVIPEFILQGSL 60

Query: 61  CSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLL 120
           C LFL T HW  FL+ VPV+ YH  L+ ++ +LIDVTEVFR +  EK  R  KL FY+ L
Sbjct: 61  CLLFLLTWHWVFFLVAVPVTVYHAMLYKERRYLIDVTEVFRGISFEKKLRYTKLGFYVFL 120

Query: 121 FLVVIFRIIMVAGMKSVFDSAPDD 145
           F++V+FR+ + A    V+    DD
Sbjct: 121 FIMVVFRLTLSA----VYSFTEDD 140

[Close]

BLAST of Carg22470 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein )

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 0


Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSLFLFT 67
           W ISF   +AL+ +  YQL+ L DLE DY+N YDS+SRIN +V+PEF++QGV C  +L T
Sbjct: 7   WLISFFFLIALVGIIVYQLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFR 127
           GHWFM L+ +P   Y+ +L+ K++HL+DVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMTLLCLPYLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFW 126

Query: 128 IIMVA 133
           +I  A
Sbjct: 127 MIYSA 131

[Close]

BLAST of Carg22470 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 8   WFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSLFLFT 67
           W ISF I + LL L  YQL+ L DLE DY+N YDS+SRIN +V+PE ++QG  C  +L T
Sbjct: 7   WIISFLILITLLGLIVYQLISLADLEFDYINPYDSASRINFVVLPESILQGFLCVFYLVT 66

Query: 68  GHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFR 127
           GHWFM L+ VP   Y+ +L+ +K+HLIDVTE+F  L  EK  RL KL + +L   + IF 
Sbjct: 67  GHWFMALLCVPYLYYNFHLYSRKQHLIDVTEIFNLLDWEKKKRLFKLAYIILTLFLTIFW 126

Query: 128 II 130
           +I
Sbjct: 127 LI 128

[Close]

BLAST of Carg22470 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein )

HSP 1 Score: 104.4 bits (259), Expect = 8.5e-23
Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 19  LVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSLFLFTGHWFMFLITVP 78
           L    + L+ L DLE DY+N YDS+SRIN +V+PEF++QGV C  +L TGHWFM L+ +P
Sbjct: 10  LANGIFHLVCLADLEFDYINPYDSASRINSVVLPEFIVQGVLCVFYLLTGHWFMTLLCLP 69

Query: 79  VSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVA 133
              Y+ +L+ K++HL+DVTE+F  L  EK  RL KL + +L   + IF +I  A
Sbjct: 70  YLYYNFHLYSKRQHLVDVTEIFNLLNWEKKKRLFKLAYIVLNLFLTIFWMIYSA 123

[Close]

BLAST of Carg22470 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 54/126 (42.86%), Postives = 83/126 (65.87%), Query Frame = 0


Query: 4   NLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSL 63
           +L+ W ISF     L+++  YQL  L DLE D +N YD SSRIN++V+PEF +QG+ C  
Sbjct: 3   DLLDWIISFLFLATLIIIVIYQLTCLADLEFDRINPYDVSSRINRMVLPEFGLQGLLCLY 62

Query: 64  FLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLV 123
           ++ TGHWFM ++++P   Y+I L++K+EHL DVTE++ T K E+  R+ K+    L   +
Sbjct: 63  YILTGHWFMAVLSLPHLFYNIRLYMKREHLADVTELYNTNKWEQKKRVYKIGHIALSIFI 122

Query: 124 VIFRII 130
             + +I
Sbjct: 123 TTYWLI 128

The following BLAST results are available for this feature:

BLAST of Carg22470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033543.1	4.7e-76	100.00	Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022967916.1	6.2e-76	99.35	protein cornichon homolog 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022928680.1	1.4e-75	98.70	protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 P...	[more]
XP_023543605.1	5.3e-75	98.05	protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022925064.1	4.9e-73	93.51	protein cornichon homolog 1-like isoform X2 [Cucurbita moschata] >XP_022966480.1...	[more]

BLAST of Carg22470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7D7	1.2e-32	51.39	Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV...	[more]
Q84W04	5.2e-25	49.60	Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV...	[more]
Q8GWT5	2.0e-24	51.64	Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV...	[more]
Q3EDD7	1.2e-21	48.25	Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g1234...	[more]
Q9SZ74	2.3e-20	42.86	Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV...	[more]

BLAST of Carg22470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTE7	3.0e-76	99.35	protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1ESA6	6.7e-76	98.70	protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HRR4	2.4e-73	93.51	protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EB17	2.4e-73	93.51	protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A1S3B5Z0	7.7e-72	92.21	protein cornichon homolog 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486176 P...	[more]

BLAST of Carg22470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12180.1	8.2e-34	51.39	Cornichon family protein	[more]
AT1G12390.1	3.7e-26	49.60	Cornichon family protein	[more]
AT1G62880.1	1.4e-25	51.64	Cornichon family protein	[more]
AT1G12340.1	8.5e-23	48.25	Cornichon family protein	[more]
AT4G12090.1	1.6e-21	42.86	Cornichon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003377	Cornichon	SMART	SM01398	Cornichon_2	coord: 5..126 e-value: 3.7E-52 score: 189.3
IPR003377	Cornichon	PFAM	PF03311	Cornichon	coord: 6..126 e-value: 1.1E-38 score: 132.3
None	No IPR available	PANTHER	PTHR12290	CORNICHON-RELATED	coord: 1..131
None	No IPR available	PANTHER	PTHR12290:SF11	PROTEIN CORNICHON	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22470-RA	Carg22470-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane