
Carg22470 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATTTCCTGAAGCTGAGCAGTTGCAGAGATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGGTGCGTTCTTTCTAATCTCATGAACCCTAGTTTCGGAATTAACTATCTTTATAATAGGTTAAGTTGCTGTTTGGTTTCCAAGGAAGTCTTAAATGCGTCTGCTGAAACGTAGCCCGAATGTTCTTCTTCTTGTTGTTGTGTAATCCTGTGGTAGCTTATTCAGTAAGGAGTGGAGGTTTGATGCGTATCTGAGATTCGTTTTGCTGCGACAGAGCATTTGGACCTCAATTTGATTTACGTCTAGACTTCGCCTATATTCTGATTGATGGAACCTTTACACTTTCTCTCGACCTGAAATGGATTTATGACTTCGTTCCATTTCACCGTTTTCTCTTGCTTTCTTAACCAATCAGTAGAGTAGTCTATTTTACGGTGATGAATCTTGGTCATTTCCTTTTGCATCCGAGTTTACAATGTAATTTTACCTTGTTAAGTGTTCTTGTAGTCTTTAGAGACGTGGCTGTATGTATATCTTGTGGGGATGAACGATAATAAATGTATTTCAACTAGAAAACTGACTTCTATTAGTATAGTTGATACCTTGTTTCTTGTTTCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGGAAAAAAATTGGTCCCAATGTTCCTGTATATCTTGTGGGGATGAACGATAGTAAATGAATTTCAACTAGAAAACTGACTTCTATTCGTATAGTTGATACCCTTGTTCTTCAATTACTGGTTCTTGATGTGGATAGAAATAAAATTGGTCCGAAAGTTCCTGCGGGTTATTTCTGGGTCACCAGTTAATTGTTGGCTATGCTCCCATTTCATTTAATACGTTCATGTACAATGGCAGGAGGAGAGAAGTGACTGCTCTTATTTTCTATGAACTATGATAATTTCTTCTTGTTATTGCTTTATATGTTCTTTATGGACTTGATGACTATTTAGAGTTTCCATTTATAGATCAATATCACTAGCCATTGTAAAGAGTACTATTAATTGTCTAGGAACATTTGTACTTCATATTGGAAGCATCTAATGGTTGTGGTTGGTCTTTTTGTAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCTTAATACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTAAGTATTTCTTGACATTAATATGAAGCATGATTTATTTTTCCTTATGCTTTGTGTAATGTATGAGGTATAATGCTGGTGTTTCTTTGTTACGTATGATACCCCTTTATTGTCTAAAGTGTTATGGATGCCAATATGAATATAACTCAATGAGTTAAAGACATTATACTCTCGATCAAGAGGTCAAAGGTTTGAATTCTCCCACCCTCACGTTTTTGTACTCTCTAAGGTGTTATAGAGGAGGCTTATGATGTTCTTTACTTGTAAAGCGGATCTAGCTTGCACTCATATTTATGTACTTTTTTCTTTTGTCATGGAAAAAAGATTATATATACTTCTTAATTTGTCAATATGTTTTGTTTTATTATTAAGCACAGTATTCTTAGAGATGCAAACATGTGAAAACTAGTTGGAAGGCTTAAGAACATCAAATAGTTTCTCTCTGAAGTTGAGATGGTCATTTCTAGAATGATTGAACTGTAGATAGCTATAATTGTCAAATTAACTTTTGGTAATAGTTCTCCCTCTGTATGAGGGATTAGTGCATTTCGGCATTTTCTGATGCTTTTGGGGAGTATTAGAGCCAGGAGGAGCTTATAATTTTAGATAATCAATGATTAGTGTTTCTGGTGGCACAATGAGCTCATAAGCTGAGATTTACAGTTCATAATTTCAATTTTATCTGGTCTATGGCTCCTGCTGGTATGGTTTTTAAATTGATTTTCATCGTCTCCCTTTATTGGGCTGCTTCCATGTTTTTCAATATGAAAAATGAGGAAAAGCAGTTGTTAGATCCCTCAAGCAAATGTTAATGACTTATGTGGAGTACTCTCTATTGTAGTGTTCTCTCTGTACTTATTTTGTTTTGAACTAACTTCTAAAGTTGAGTATCTAGCGACTTGGGTGGTATAGCCACCTCTTTAGCAGTAAGCGTGAAGAAAAGATTTACGAGATAAACGTCCTGACTCAAGCAACTAAAATCTAGAATCGATTAGGCTAAACGATATCCAACTTGGTTGGAATGGATAACCATTCGTCCACATCTTTGTCATGGTAATACCTTTTGAAATTGAGCATTCACTCACCTAGATCATAATGAGTTGATGATTGCATATTGAACGGATCTTATTGACTAAAGCACTGAAAGTAAACATTTTTTTTTTTTCATATATTACTTTTTCATCAATATAAAAGATAAAGGTATAGAAAAAAATGTTGAGGCTGGCCAAGACTAAGTACCAATGTATAACTAAACTTGGCTTGGATAGAATAGTGGTTTACAACTATGATGTTTGACGACGAATAAAAGAGATACGAGTAGATATATAGAAAATAGAAGATCAACTAAGTATCGCACTCTTGGAGATTGTGAACAATACAACGGAAAATTTTGTTGCACCACACTGATGTCCAAAGAAATATAAATAAATACAGATGCTTTAACAGTTAAATGATAACTTATGTAATTTCATTCTGATAAGGGAGTAGCGCATGCTTGTTTTTGGTTACTTTTGTTGTAATTACTATCAACTTCCAAAAGGACTCTGTATTCTAGATTCTTGATGAACCAATTATCCTGGTGCCTATTGTTGCTTTGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTAACATTCTTATTCCATGTAGCTATTCCAGTAATATACTGAAATTTAATTCCATTAGATATGTTCTCTGTCGACTGAACTACACCAACTTATTGTTTGAATCTTAGATGCTTTAAAAAGTATAATTGATTTTCAGTGATGGCTTGAAACTAATGCTGATCTTCTTAAAGAATAAAACTAGAGTTTTCAAATGTATGATATCCTATTGTTTGAGGATCCTGCAAATATGTTTTTAATAGATTCTCAGTGATGGATAGACGTCTACTGCTGATATTTTTTAGAAATAAAACCAAAATTTTCTAGATGAAAGTTTCTATTCCACTAGTTGGACCGAGAATTTTCAAGCATTTCCCCATTTTTGTGTGTATATGATGTATATTATCCGGTTACAATGTCCCAGGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGGTAAGTCTGCAATTTCATTGTTTCTCTCCTCTAAACTATTTAGAAAGTGGTATCCTTTCTGATTGAAGTTTCCTTGTTTTCTGTATAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAGAGTATTTATTTCACCATTTAGCTCGAAGTTGAATCCATCATCTGTTTTAAAATTCGTATATGATTACATGAGAAATTATCTACTCTTTTATTCATTGCAAAGTTCTTAAATATAATGCTGTTGCACTGATTTTGATACTGTTATGTTGGTTTTGGAAGCTGTATACCATGAGTATCTGTTGCCTTGGCGCCAGTATGTTGTTAATAACGCATGGCTCCAGGATCTTGAACTTTGTTCTGCTAGCAAATCTTGCTTCTTTCTAGCTTTTGCTGGTCCTGTATGTGCGCTATAAATTAAGTTAGAATGTTCAATAGCTCTTCATATATTAAAGATGTAGCTTTCTGTAGCTTTATGGATGACTCCCATGCTTTTGACATCTGGTACATGCGCACTTGCATACACACGATTATCCGTTATGTATCGTGGATTCATTTCGTCTTAACGATAAAGATAAAGCACGAACATGGACATTATTCATTCTGAATTTCACCTGTCATACTAGCATTCTTACATGTATTAAATTACCATGAACTGCAGGCTTACTTTGTCTGCTTTCAACTCTTTATCTGATGAAGATGACGTCCTACATTTATTTTGATCGCCACTCTTATTAGTTCGTATTACGGGTCTAAAGCATGTCTAGTCGATATTTGTATGGGAGATACGTTATTTGTATGGGAGATACATGGAGGAAACGAATTTGGACTTGGCAACTTCAAACACATTCAAACAGGTTTTTCCTCCCATTCCCATCCATTGGCTTGGTAGGCTCCATTGCAATGTCAGTTCATATGTTCTCCAATTAAAAATGTTGTTATTGTCGAATGAATTTTAGCCTTATAGGCAGTTATGATTGTCAATTTTAGCATTTTTCTTCTTTTTGCGATTACATGGATTATACCGAATTGCACTTTAGGGTCTCATATTTGCACAGTTTTGGAATATCAACTAGTTTCAATTTGAAGTATTCTCGTAAGGATTCAAAGAA TGAATTTCCTGAAGCTGAGCAGTTGCAGAGATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCTTAATACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAGAGTATTTATTTCACCATTTAGCTCGAAGTTGAATCCATCATCTGTTTTAAAATTCGTATATGATTACATGAGAAATTATCTACTCTTTTATTCATTGCAAAGTTCTTAAATATAATGCTGTTGCACTGATTTTGATACTGTTATGTTGGTTTTGGAAGCTGTATACCATGAGTATCTGTTGCCTTGGCGCCAGTATGTTGTTAATAACGCATGGCTCCAGGATCTTGAACTTTGTTCTGCTAGCAAATCTTGCTTCTTTCTAGCTTTTGCTGGTCCTGTATGTGCGCTATAAATTAAGTTAGAATGTTCAATAGCTCTTCATATATTAAAGATGTAGCTTTCTGTAGCTTTATGGATGACTCCCATGCTTTTGACATCTGGTACATGCGCACTTGCATACACACGATTATCCGTTATGTATCGTGGATTCATTTCGTCTTAACGATAAAGATAAAGCACGAACATGGACATTATTCATTCTGAATTTCACCTGTCATACTAGCATTCTTACATGTATTAAATTACCATGAACTGCAGGCTTACTTTGTCTGCTTTCAACTCTTTATCTGATGAAGATGACGTCCTACATTTATTTTGATCGCCACTCTTATTAGTTCGTATTACGGGTCTAAAGCATGTCTAGTCGATATTTGTATGGGAGATACGTTATTTGTATGGGAGATACATGGAGGAAACGAATTTGGACTTGGCAACTTCAAACACATTCAAACAGGTTTTTCCTCCCATTCCCATCCATTGGCTTGGTAGGCTCCATTGCAATGTCAGTTCATATGTTCTCCAATTAAAAATGTTGTTATTGTCGAATGAATTTTAGCCTTATAGGCAGTTATGATTGTCAATTTTAGCATTTTTCTTCTTTTTGCGATTACATGGATTATACCGAATTGCACTTTAGGGTCTCATATTTGCACAGTTTTGGAATATCAACTAGTTTCAATTTGAAGTATTCTCGTAAGGATTCAAAGAA ATGGCGTGGAATCTGATCTTTTGGTTCATCTCTTTCTGTATCAACGTCGCCCTCCTCGTCCTCAACTTTTACCAGCTTTTGGTATTAACAGATTTGGAGGCAGATTATTTGAACATCTATGATTCATCATCTCGCATTAATAAACTTGTCATTCCAGAATTCTTAATACAAGGAGTATTTTGCTCTCTTTTCCTCTTCACTGGCCATTGGTTCATGTTTCTTATAACCGTCCCTGTTAGCTGCTACCACATAAATTTGTTCTTGAAGAAGGAGCATCTTATTGATGTTACTGAGGTCTTTAGAACTCTTAAACGTGAGAAGTATTTTCGTTTGGCCAAGCTTATCTTCTACTTGCTTTTGTTCCTCGTAGTTATCTTCAGAATAATAATGGTTGCCGGAATGAAATCTGTTTTTGACTCTGCACCTGATGATATAGACATTCGCTCCACTGTCCTCGAATTCTAG MAWNLIFWFISFCINVALLVLNFYQLLVLTDLEADYLNIYDSSSRINKLVIPEFLIQGVFCSLFLFTGHWFMFLITVPVSCYHINLFLKKEHLIDVTEVFRTLKREKYFRLAKLIFYLLLFLVVIFRIIMVAGMKSVFDSAPDDIDIRSTVLEF Homology
BLAST of Carg22470 vs. NCBI nr
Match: KAG7033543.1 (Protein cornichon-like 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 294.7 bits (753), Expect = 4.7e-76 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22470 vs. NCBI nr
Match: XP_022967916.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22470 vs. NCBI nr
Match: XP_022928680.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita moschata] >KAG6603241.1 Protein cornichon-like 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22470 vs. NCBI nr
Match: XP_023543605.1 (protein cornichon homolog 1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 291.2 bits (744), Expect = 5.3e-75 Identity = 151/154 (98.05%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22470 vs. NCBI nr
Match: XP_022925064.1 (protein cornichon homolog 1-like isoform X2 [Cucurbita moschata] >XP_022966480.1 protein cornichon homolog 1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 284.6 bits (727), Expect = 4.9e-73 Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q9C7D7 (Protein cornichon homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12180 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.2e-32 Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q84W04 (Protein cornichon homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g12390 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 5.2e-25 Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q8GWT5 (Protein cornichon homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g62880 PE=2 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24 Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q3EDD7 (Probable protein cornichon homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12340 PE=2 SV=2) HSP 1 Score: 104.4 bits (259), Expect = 1.2e-21 Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy Swiss-Prot
Match: Q9SZ74 (Protein cornichon homolog 5 OS=Arabidopsis thaliana OX=3702 GN=At4g12090 PE=2 SV=2) HSP 1 Score: 100.1 bits (248), Expect = 2.3e-20 Identity = 54/126 (42.86%), Postives = 83/126 (65.87%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A6J1HTE7 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467288 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 3.0e-76 Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A6J1ESA6 (protein cornichon homolog 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435524 PE=3 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 6.7e-76 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A6J1HRR4 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466123 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73 Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A6J1EB17 (protein cornichon homolog 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432423 PE=3 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73 Identity = 144/154 (93.51%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of Carg22470 vs. ExPASy TrEMBL
Match: A0A1S3B5Z0 (protein cornichon homolog 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486176 PE=3 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 7.7e-72 Identity = 142/154 (92.21%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Carg22470 vs. TAIR 10
Match: AT3G12180.1 (Cornichon family protein ) HSP 1 Score: 141.0 bits (354), Expect = 8.2e-34 Identity = 74/144 (51.39%), Postives = 103/144 (71.53%), Query Frame = 0
BLAST of Carg22470 vs. TAIR 10
Match: AT1G12390.1 (Cornichon family protein ) HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26 Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 0
BLAST of Carg22470 vs. TAIR 10
Match: AT1G62880.1 (Cornichon family protein ) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25 Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 0
BLAST of Carg22470 vs. TAIR 10
Match: AT1G12340.1 (Cornichon family protein ) HSP 1 Score: 104.4 bits (259), Expect = 8.5e-23 Identity = 55/114 (48.25%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of Carg22470 vs. TAIR 10
Match: AT4G12090.1 (Cornichon family protein ) HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21 Identity = 54/126 (42.86%), Postives = 83/126 (65.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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