Carg22406 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22406
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein FMP32, mitochondrial
Location	Carg_Chr01: 9175065 .. 9176437 (-)
RNA-Seq Expression	Carg22406
Synteny	Carg22406

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGGTATGACAACCTTGAGGTCGTTTTTGATGTTTTATTTGCCTCTTTTGGAGCCTCATGCCAAGTTGGAAGACGAGGACGATGACGATTTTCTAGATGATGCTCAAGAAGAGAAGCATGTCGATCTAGTTTCGCCCTTTAAAAAGTCCATCAAACAAATCTTTCGTGAGGTCTGTTCAATTGCTCATCCTCTGATTAAGCATGTTGATCTAGTTCTTATTCATGAGTTCGTTGGTTCGGGTGTCGTGTAACCAGCTTTGGGAGCAATATCTCTACCAAAACTACCTTCTTTCATCTGTCTCTATAATATGTTTTTCTTGTAACATATGAAATGAAGCTAATTGATTGCCTTATTTGGATATCATCAGACTACCGTCGTGACGACGAGACGTGTTTTGGAACGAATTGCTGTCCACTATGCTTCGCAGAGAATAGCATGGAAGCTTCTTAAAGGTATAAATCTCCTCACCGTTCCAAATTTTTTGGGTTTAAAATGGCAAAGAAGATATGAACTTGTCTATTCATGACATGACAGATGTTCCCAAATCTGCTGTTCGTAAGGCTGGACGAGGACTGTCTACTCCGATCTACTTCTTCCGAGTTAGTAGGACGACTTTCAGAGGTTAAATTCTATCTACCCAGCTCCCCCGACCCCGACTCTCGAATGCTCATTGTATATTCCTGTTTGGAAACGACAATGCAGGACACGCTCTAGGAGTTGCAGCTTCATGGCTTGTTCAAGTCGGTATCGAAATCTACCGATACATATCAGAGAAAATAAAATCCAAAGAAGACAATATCGTTAACAAGACCGAGAAACTAGTACTTCTAAGGAAGAAGATTGCAGGCGCTACCCTTGGGTGTAGCTCGTCACTAGTTTTCGCTTCCATTGGAGCAGGTATCGGCGCCACGCTCTTCCGCCCATCAGCTGGCCAGTGGATCGGTAAATTTACACCCTTATAAATCGGTAGCGAAATGTCGTGACTGGTTGTTTTTTTACCATTGGAAGGTTTGATTTTGTGTGCAGGATGTGCCGTGGGGGACTTGGCAGGGCCTGTTATTGTGACAGTTTGCCTGGAGAAAGGTTTGAACTTGGATCTTTAGGTTTCTGTTCTAGAGTTTAATGTGCTGACTGATTCTTTGAGCATTGTGGCTATTTAATCACCAGACTTTGAACAAGTTTTAAGTATATGTTGTTAGCCACATGAATGTAAAACTGATATGAAATGAGAATTTATTAAATTTCACCTTAATTGGCGTGTGATAAGTATGTAAATGTATGAGTCCATGACATCGCTTTTATGAAGTCGTTTTAAATGAATGTTTCTGCATAAAAAAAGTTACGCCATGTATATGGTAAAATAGAAAA

mRNA sequence

ATGCTTGGTATGACAACCTTGAGGTCGTTTTTGATGTTTTATTTGCCTCTTTTGGAGCCTCATGCCAAGTTGGAAGACGAGGACGATGACGATTTTCTAGATGATGCTCAAGAAGAGAAGCATGTCGATCTAGTTTCGCCCTTTAAAAAGTCCATCAAACAAATCTTTCGTGAGACTACCGTCGTGACGACGAGACGTGTTTTGGAACGAATTGCTGTCCACTATGCTTCGCAGAGAATAGCATGGAAGCTTCTTAAAGATGTTCCCAAATCTGCTGTTCGTAAGGCTGGACGAGGACTGTCTACTCCGATCTACTTCTTCCGAGTTAGTAGGACGACTTTCAGAGGACACGCTCTAGGAGTTGCAGCTTCATGGCTTGTTCAAGTCGGTATCGAAATCTACCGATACATATCAGAGAAAATAAAATCCAAAGAAGACAATATCGTTAACAAGACCGAGAAACTAGTACTTCTAAGGAAGAAGATTGCAGGCGCTACCCTTGGGTGTAGCTCGTCACTAGTTTTCGCTTCCATTGGAGCAGGTATCGGCGCCACGCTCTTCCGCCCATCAGCTGGCCAGTGGATCGGATGTGCCGTGGGGGACTTGGCAGGGCCTGTTATTGTGACAGTTTGCCTGGAGAAAGGTTTGAACTTGGATCTTTAGGTTTCTGTTCTAGAGTTTAATGTGCTGACTGATTCTTTGAGCATTGTGGCTATTTAATCACCAGACTTTGAACAAGTTTTAAGTATATGTTGTTAGCCACATGAATGTAAAACTGATATGAAATGAGAATTTATTAAATTTCACCTTAATTGGCGTGTGATAAGTATGTAAATGTATGAGTCCATGACATCGCTTTTATGAAGTCGTTTTAAATGAATGTTTCTGCATAAAAAAAGTTACGCCATGTATATGGTAAAATAGAAAA

Coding sequence (CDS)

ATGCTTGGTATGACAACCTTGAGGTCGTTTTTGATGTTTTATTTGCCTCTTTTGGAGCCTCATGCCAAGTTGGAAGACGAGGACGATGACGATTTTCTAGATGATGCTCAAGAAGAGAAGCATGTCGATCTAGTTTCGCCCTTTAAAAAGTCCATCAAACAAATCTTTCGTGAGACTACCGTCGTGACGACGAGACGTGTTTTGGAACGAATTGCTGTCCACTATGCTTCGCAGAGAATAGCATGGAAGCTTCTTAAAGATGTTCCCAAATCTGCTGTTCGTAAGGCTGGACGAGGACTGTCTACTCCGATCTACTTCTTCCGAGTTAGTAGGACGACTTTCAGAGGACACGCTCTAGGAGTTGCAGCTTCATGGCTTGTTCAAGTCGGTATCGAAATCTACCGATACATATCAGAGAAAATAAAATCCAAAGAAGACAATATCGTTAACAAGACCGAGAAACTAGTACTTCTAAGGAAGAAGATTGCAGGCGCTACCCTTGGGTGTAGCTCGTCACTAGTTTTCGCTTCCATTGGAGCAGGTATCGGCGCCACGCTCTTCCGCCCATCAGCTGGCCAGTGGATCGGATGTGCCGTGGGGGACTTGGCAGGGCCTGTTATTGTGACAGTTTGCCTGGAGAAAGGTTTGAACTTGGATCTTTAG

Protein sequence

MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETTVVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALGVAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGAGIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL

Homology

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BLAST of Carg22406 vs. NCBI nr
Match: KAG7037332.1 (hypothetical protein SDJN02_00957, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.1 bits (1089), Expect = 7.4e-115
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT
Sbjct: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 60

Query: 61  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 120
           VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG
Sbjct: 61  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 120

Query: 121 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA 180
           VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA
Sbjct: 121 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA 180

Query: 181 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL
Sbjct: 181 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 220

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BLAST of Carg22406 vs. NCBI nr
Match: XP_022940670.1 (uncharacterized protein LOC111446193 [Cucurbita moschata])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT
Sbjct: 107 MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 166

Query: 61  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 120
           VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG
Sbjct: 167 VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 226

Query: 121 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA 180
           VAASWLVQVGIEIYRYISEKIKS+EDNIVNKTEKLVLLRKKIAGATL CSSSLVFASIGA
Sbjct: 227 VAASWLVQVGIEIYRYISEKIKSEEDNIVNKTEKLVLLRKKIAGATLRCSSSLVFASIGA 286

Query: 181 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL
Sbjct: 287 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 326

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BLAST of Carg22406 vs. NCBI nr
Match: XP_023523381.1 (uncharacterized protein LOC111787598 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.2 bits (1071), Expect = 9.1e-113
Identity = 217/220 (98.64%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT
Sbjct: 107 MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 166

Query: 61  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 120
           VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG
Sbjct: 167 VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 226

Query: 121 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA 180
           VAASWLVQVGIEIYRYISEKIKS+EDNIVNKTEKLVLLRKKIA ATL CSSSLVFASIGA
Sbjct: 227 VAASWLVQVGIEIYRYISEKIKSEEDNIVNKTEKLVLLRKKIASATLRCSSSLVFASIGA 286

Query: 181 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL
Sbjct: 287 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 326

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BLAST of Carg22406 vs. NCBI nr
Match: XP_022981550.1 (uncharacterized protein LOC111480633 [Cucurbita maxima])

HSP 1 Score: 411.8 bits (1057), Expect = 3.8e-111
Identity = 216/222 (97.30%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDE--DDDDFLDDAQEEKHVDLVSPFKKSIKQIFRE 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDE  DDDDFLDDAQEEKHVDLV PFKKSIKQIFRE
Sbjct: 107 MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDDDFLDDAQEEKHVDLVLPFKKSIKQIFRE 166

Query: 61  TTVVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHA 120
           TTVVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHA
Sbjct: 167 TTVVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHA 226

Query: 121 LGVAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASI 180
           LGVAASWLVQVGIEIYRYISEKIKS+EDNIVNKTEKLVLLRKKIAGATL CSSSLVFASI
Sbjct: 227 LGVAASWLVQVGIEIYRYISEKIKSEEDNIVNKTEKLVLLRKKIAGATLRCSSSLVFASI 286

Query: 181 GAGIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GAGIGATLFRPSAGQWIGCAVGDLAGPV+VTVCLEKGLNLDL
Sbjct: 287 GAGIGATLFRPSAGQWIGCAVGDLAGPVVVTVCLEKGLNLDL 328

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BLAST of Carg22406 vs. NCBI nr
Match: XP_038898033.1 (uncharacterized protein LOC120085869 [Benincasa hispida])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 196/220 (89.09%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDEDD+DFL+DAQEEKHVDLVSPFKKS+KQI RETT
Sbjct: 106 MLGMTTLRSFLMFYLPLLEPHAKLEDEDDEDFLNDAQEEKHVDLVSPFKKSVKQIVRETT 165

Query: 61  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 120
           VVTTRR+LERI+VHYASQRIAWKLLKDVPKSA+RKAGRGL T +YFFRV+RTTFRGHALG
Sbjct: 166 VVTTRRILERISVHYASQRIAWKLLKDVPKSAMRKAGRGLPTSVYFFRVTRTTFRGHALG 225

Query: 121 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA 180
           VAASWLVQVGIEIYRY+S K+KSKED++V +TEK ++LRKKI GATL CS+SLVFASIGA
Sbjct: 226 VAASWLVQVGIEIYRYVSAKVKSKEDDVVEETEKAIVLRKKITGATLRCSASLVFASIGA 285

Query: 181 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL
Sbjct: 286 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 325

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BLAST of Carg22406 vs. ExPASy TrEMBL
Match: A0A6J1FRA0 (uncharacterized protein LOC111446193 OS=Cucurbita moschata OX=3662 GN=LOC111446193 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.8e-114
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT
Sbjct: 107 MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 166

Query: 61  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 120
           VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG
Sbjct: 167 VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 226

Query: 121 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA 180
           VAASWLVQVGIEIYRYISEKIKS+EDNIVNKTEKLVLLRKKIAGATL CSSSLVFASIGA
Sbjct: 227 VAASWLVQVGIEIYRYISEKIKSEEDNIVNKTEKLVLLRKKIAGATLRCSSSLVFASIGA 286

Query: 181 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL
Sbjct: 287 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 326

[Close]

BLAST of Carg22406 vs. ExPASy TrEMBL
Match: A0A6J1IZT3 (uncharacterized protein LOC111480633 OS=Cucurbita maxima OX=3661 GN=LOC111480633 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111
Identity = 216/222 (97.30%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDE--DDDDFLDDAQEEKHVDLVSPFKKSIKQIFRE 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDE  DDDDFLDDAQEEKHVDLV PFKKSIKQIFRE
Sbjct: 107 MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDDDFLDDAQEEKHVDLVLPFKKSIKQIFRE 166

Query: 61  TTVVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHA 120
           TTVVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHA
Sbjct: 167 TTVVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHA 226

Query: 121 LGVAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASI 180
           LGVAASWLVQVGIEIYRYISEKIKS+EDNIVNKTEKLVLLRKKIAGATL CSSSLVFASI
Sbjct: 227 LGVAASWLVQVGIEIYRYISEKIKSEEDNIVNKTEKLVLLRKKIAGATLRCSSSLVFASI 286

Query: 181 GAGIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GAGIGATLFRPSAGQWIGCAVGDLAGPV+VTVCLEKGLNLDL
Sbjct: 287 GAGIGATLFRPSAGQWIGCAVGDLAGPVVVTVCLEKGLNLDL 328

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BLAST of Carg22406 vs. ExPASy TrEMBL
Match: A0A0A0K342 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G162540 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.6e-102
Identity = 192/220 (87.27%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDEDD+DFL+D QEE+HVDLVSPFKKSIKQI RETT
Sbjct: 105 MLGMTTLRSFLMFYLPLLEPHAKLEDEDDEDFLNDNQEEQHVDLVSPFKKSIKQIVRETT 164

Query: 61  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 120
           VVTTRR+LERI+VHYASQRIAWKLLKDVPKSAVRKAGR L T +YFFRV+RTTFRGHALG
Sbjct: 165 VVTTRRILERISVHYASQRIAWKLLKDVPKSAVRKAGRELPTLVYFFRVTRTTFRGHALG 224

Query: 121 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA 180
           VAASWLVQVGIEIYRY+S K+K K+D++V++T+K+++LRKKIAGATL CS+SLVFASIGA
Sbjct: 225 VAASWLVQVGIEIYRYVSAKVKPKDDDVVDETDKVIILRKKIAGATLRCSASLVFASIGA 284

Query: 181 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GIGATLFRPSAGQWIGCAVGDLAGPVIVT+CLEKGLNLDL
Sbjct: 285 GIGATLFRPSAGQWIGCAVGDLAGPVIVTICLEKGLNLDL 324

[Close]

BLAST of Carg22406 vs. ExPASy TrEMBL
Match: A0A6J1CD40 (uncharacterized protein LOC111010572 OS=Momordica charantia OX=3673 GN=LOC111010572 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.0e-101
Identity = 197/221 (89.14%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKH-VDLVSPFKKSIKQIFRET 60
           MLGMTTLRSFLMFYLPLLEPHAKLED+DD+DFL DAQEEK  VD V+P KKSIKQI RET
Sbjct: 113 MLGMTTLRSFLMFYLPLLEPHAKLEDDDDEDFLSDAQEEKQPVDFVAPLKKSIKQIVRET 172

Query: 61  TVVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHAL 120
           TVVTTRRVLERIAVHYASQR+AWKLLKDVPKSAVRKA RGLST +YFFRVSRTTFRGHAL
Sbjct: 173 TVVTTRRVLERIAVHYASQRMAWKLLKDVPKSAVRKAERGLSTSVYFFRVSRTTFRGHAL 232

Query: 121 GVAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIG 180
           GVAASWLVQVGIEIYRYIS K+KS ED+IV +TEK++LLRKKIAGATL CS+SLVFASIG
Sbjct: 233 GVAASWLVQVGIEIYRYISAKVKSTEDDIVVETEKVILLRKKIAGATLRCSASLVFASIG 292

Query: 181 AGIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           +GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL
Sbjct: 293 SGIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 333

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BLAST of Carg22406 vs. ExPASy TrEMBL
Match: A0A1S3CI59 (uncharacterized protein LOC103501235 OS=Cucumis melo OX=3656 GN=LOC103501235 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 6.6e-101
Identity = 192/220 (87.27%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 1   MLGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEEKHVDLVSPFKKSIKQIFRETT 60
           MLGMTTLRSFLMFYLPLLEPHAKLEDEDD+DFL+D QEE+ VDLVSPFKKSIKQI RETT
Sbjct: 105 MLGMTTLRSFLMFYLPLLEPHAKLEDEDDEDFLNDNQEEQKVDLVSPFKKSIKQIVRETT 164

Query: 61  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 120
           VVTTRR+LERI+VHYASQRIAWKLLKDVPKSAVRKAGRGL T +YFFRV+RTTFRGHALG
Sbjct: 165 VVTTRRILERISVHYASQRIAWKLLKDVPKSAVRKAGRGLPTSVYFFRVTRTTFRGHALG 224

Query: 121 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTEKLVLLRKKIAGATLGCSSSLVFASIGA 180
           VAASWLVQVGIEIYRY+S K+K KED+ V++T+K+++LRKKIAGATL CS+SLVFASIGA
Sbjct: 225 VAASWLVQVGIEIYRYVSAKVKPKEDDGVDETDKVIILRKKIAGATLRCSASLVFASIGA 284

Query: 181 GIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLDL 221
           GIGATLFRPSAGQWIGCAVGDLAGPVIVT+ LEKGLNLDL
Sbjct: 285 GIGATLFRPSAGQWIGCAVGDLAGPVIVTIFLEKGLNLDL 324

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BLAST of Carg22406 vs. TAIR 10
Match: AT5G55610.1 (unknown protein; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 263.1 bits (671), Expect = 2.0e-70
Identity = 141/222 (63.51%), Postives = 171/222 (77.03%), Query Frame = 0


Query: 2   LGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEE-KHVDLVSPFKKSIKQIFRETT 61
           L MTT+RS LMFYLPLLEP  K   EDDDDFL++A EE +H DL+ P KKS KQI RETT
Sbjct: 109 LAMTTVRSLLMFYLPLLEP--KTASEDDDDFLNNAAEENRHTDLIVPLKKSAKQIARETT 168

Query: 62  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRGHALG 121
           VVTTRRVLER+A+ Y SQR+AWKLLKDVP+SA+RKA RGL T +Y F+VS+TT RGH LG
Sbjct: 169 VVTTRRVLERLALSYVSQRMAWKLLKDVPQSALRKAQRGLPTHVYIFKVSQTTLRGHFLG 228

Query: 122 VAASWLVQVGIEIYRYISEKIKSKEDNIVNKTE---KLVLLRKKIAGATLGCSSSLVFAS 181
           +AASW+VQVGIEIYR +   +K +E+    K E   +   L  K+ G T+ C +SLVFA+
Sbjct: 229 IAASWVVQVGIEIYRCVFPNVKPEEEEEEEKVEISQQAKDLGNKVVGITVRCGASLVFAA 288

Query: 182 IGAGIGATLFRPSAGQWIGCAVGDLAGPVIVTVCLEKGLNLD 220
           IGAGI + L RPS GQWIGCA+GDLAGP++V+VCL+K L  D
Sbjct: 289 IGAGICSCLIRPSTGQWIGCALGDLAGPMVVSVCLQKTLQAD 328

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BLAST of Carg22406 vs. TAIR 10
Match: AT5G55610.2 (unknown protein; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 5.1e-37
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 0


Query: 2   LGMTTLRSFLMFYLPLLEPHAKLEDEDDDDFLDDAQEE-KHVDLVSPFKKSIKQIFRETT 61
           L MTT+RS LMFYLPLLEP  K   EDDDDFL++A EE +H DL+ P KKS KQI RETT
Sbjct: 109 LAMTTVRSLLMFYLPLLEP--KTASEDDDDFLNNAAEENRHTDLIVPLKKSAKQIARETT 168

Query: 62  VVTTRRVLERIAVHYASQRIAWKLLKDVPKSAVRKAGRGLSTPIYFFRVSRTTFRG 117
           VVTTRRVLER+A+ Y SQR+AWKLLKDVP+SA+RKA RGL T +Y F+VS+TT RG
Sbjct: 169 VVTTRRVLERLALSYVSQRMAWKLLKDVPQSALRKAQRGLPTHVYIFKVSQTTLRG 222

The following BLAST results are available for this feature:

BLAST of Carg22406 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037332.1	7.4e-115	100.00	hypothetical protein SDJN02_00957, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022940670.1	1.8e-113	99.09	uncharacterized protein LOC111446193 [Cucurbita moschata]	[more]
XP_023523381.1	9.1e-113	98.64	uncharacterized protein LOC111787598 [Cucurbita pepo subsp. pepo]	[more]
XP_022981550.1	3.8e-111	97.30	uncharacterized protein LOC111480633 [Cucurbita maxima]	[more]
XP_038898033.1	1.5e-104	89.09	uncharacterized protein LOC120085869 [Benincasa hispida]	[more]

BLAST of Carg22406 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg22406 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRA0	8.8e-114	99.09	uncharacterized protein LOC111446193 OS=Cucurbita moschata OX=3662 GN=LOC1114461...	[more]
A0A6J1IZT3	1.8e-111	97.30	uncharacterized protein LOC111480633 OS=Cucurbita maxima OX=3661 GN=LOC111480633...	[more]
A0A0A0K342	1.6e-102	87.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G162540 PE=4 SV=1	[more]
A0A6J1CD40	5.0e-101	89.14	uncharacterized protein LOC111010572 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A1S3CI59	6.6e-101	87.27	uncharacterized protein LOC103501235 OS=Cucumis melo OX=3656 GN=LOC103501235 PE=...	[more]

BLAST of Carg22406 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55610.1	2.0e-70	63.51	unknown protein; LOCATED IN: mitochondrion, chloroplast, plastid, membrane; EXPR...	[more]
AT5G55610.2	5.1e-37	70.69	unknown protein; LOCATED IN: mitochondrion, plastid, membrane; EXPRESSED IN: 25 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 141..161
None	No IPR available	PANTHER	PTHR36074	ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE	coord: 2..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22406-RA	Carg22406-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion