Carg22145 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg22145
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiondesiccation-related protein PCC13-62-like
LocationCarg_Chr08: 2348530 .. 2349722 (+)
RNA-Seq ExpressionCarg22145
SyntenyCarg22145
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACAATCACAAAATTTGAACATAACATTCAGTTCAAACATGAGAAATCCCTCGTTCTTTTCAACACTTTTTCTCGTTGTTGCTTTAGTATTCAACTCGAGTCGAGTCGTAGTATGTCAAATTTTGGGTCAATGCCGGTCGGGGCCAGCGTCCGACAGCCAAATCATTGTGTTCGCTACGAATTTCGAGTACCTCGAAAGTGAGATGTTCTTGTGGGGTGCCCTTGGGAGAGGGATGGACTCCATTGATCCAACTTTAGCACGTGGAGGGCCACCCCCTATTGGTGCTCAAAGGGCCAACTTAGACCCTATGGTTCGTAATATCATTGAGGAATTTGGATATGAAGAAATTGGACAATTAAAGTTAAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTAATCAATATTGTTCTTATTGTTCTTCATTTCTGGATGATTTCAGAACTCTTATTCAGGTATCTGGTGGATTAGGTATTCAAAGGCCATTGTTGAATCTAAGCAAAGATGTATTTTCGGATCTATTTGACAAAGCTGCTGGTCGTCGACTCAGCCCTCCATTCGATCCTTATGTCGATACCATCCATTTTCTCCTCGCTGTTAACCTTTTCCCGTATCTCGGATACACTGGTCTTGTTGAAGCAGCCCCAGTGCTCCTCTTTCTCGAATCTCGTAGGGTAGTATTTGAAAAAATACTGTCAGTTTTAGATAGAAACCGTTAAAATTTTGTTTAAAAAATGCTCTTGAATGTATAAAATTCCTTCGAACTTTTTTAAAAAGTTAAAAAGTACTATTGTTGTTAGTATATGAATGAAACCGTTAGTTCTACGTTTCGAAAATAATATTAGAACTTTTAGAAAAAAGTTTAAAAGGATTTTACGGTATTATTAAAAAAATTTAAAAGTTTATGAGTAATTTTGATGCAGCTAGCAGCTAAGCTGTTGAGTGCCGAGTCAGGGCAGAATGCTGTTATGCGAACGCTGCTGTACGAGAGGGCGAACGAGACTGTGGAGCCATATAATATGACTGTGGCTGAATTCACTAACCTGATCTCGACGCTGGCGAACCAGCTTGGTAAATGTGGGCTCAAAGACGAAGGGGTGGTGGTGCCTCGATCGCTCGGGGCAGAGAATCGAACGGAGACCAACGTCCTCGCCACCGACGCTAAATCTCTT

mRNA sequence

ATGTCACAATCACAAAATTTGAACATAACATTCAGTTCAAACATGAGAAATCCCTCGTTCTTTTCAACACTTTTTCTCGTTGTTGCTTTAGTATTCAACTCGAGTCGAGTCGTAGTATGTCAAATTTTGGGTCAATGCCGGTCGGGGCCAGCGTCCGACAGCCAAATCATTGTGTTCGCTACGAATTTCGAGTACCTCGAAAGTGAGATGTTCTTGTGGGGTGCCCTTGGGAGAGGGATGGACTCCATTGATCCAACTTTAGCACGTGGAGGGCCACCCCCTATTGGTGCTCAAAGGGCCAACTTAGACCCTATGGTTCGTAATATCATTGAGGAATTTGGATATGAAGAAATTGGACAATTAAAAACTCTTATTCAGGTATCTGGTGGATTAGGTATTCAAAGGCCATTGTTGAATCTAAGCAAAGATGTATTTTCGGATCTATTTGACAAAGCTGCTGGTCGTCGACTCAGCCCTCCATTCGATCCTTATGTCGATACCATCCATTTTCTCCTCGCTGTTAACCTTTTCCCGTATCTCGGATACACTGGTCTTGTTGAAGCAGCCCCAGTGCTCCTCTTTCTCGAATCTCGTAGGCTAGCAGCTAAGCTGTTGAGTGCCGAGTCAGGGCAGAATGCTGTTATGCGAACGCTGCTGTACGAGAGGGCGAACGAGACTGTGGAGCCATATAATATGACTGTGGCTGAATTCACTAACCTGATCTCGACGCTGGCGAACCAGCTTGGTAAATGTGGGCTCAAAGACGAAGGGGTGGTGGTGCCTCGATCGCTCGGGGCAGAGAATCGAACGGAGACCAACGTCCTCGCCACCGACGCTAAATCTCTT

Coding sequence (CDS)

ATGTCACAATCACAAAATTTGAACATAACATTCAGTTCAAACATGAGAAATCCCTCGTTCTTTTCAACACTTTTTCTCGTTGTTGCTTTAGTATTCAACTCGAGTCGAGTCGTAGTATGTCAAATTTTGGGTCAATGCCGGTCGGGGCCAGCGTCCGACAGCCAAATCATTGTGTTCGCTACGAATTTCGAGTACCTCGAAAGTGAGATGTTCTTGTGGGGTGCCCTTGGGAGAGGGATGGACTCCATTGATCCAACTTTAGCACGTGGAGGGCCACCCCCTATTGGTGCTCAAAGGGCCAACTTAGACCCTATGGTTCGTAATATCATTGAGGAATTTGGATATGAAGAAATTGGACAATTAAAAACTCTTATTCAGGTATCTGGTGGATTAGGTATTCAAAGGCCATTGTTGAATCTAAGCAAAGATGTATTTTCGGATCTATTTGACAAAGCTGCTGGTCGTCGACTCAGCCCTCCATTCGATCCTTATGTCGATACCATCCATTTTCTCCTCGCTGTTAACCTTTTCCCGTATCTCGGATACACTGGTCTTGTTGAAGCAGCCCCAGTGCTCCTCTTTCTCGAATCTCGTAGGCTAGCAGCTAAGCTGTTGAGTGCCGAGTCAGGGCAGAATGCTGTTATGCGAACGCTGCTGTACGAGAGGGCGAACGAGACTGTGGAGCCATATAATATGACTGTGGCTGAATTCACTAACCTGATCTCGACGCTGGCGAACCAGCTTGGTAAATGTGGGCTCAAAGACGAAGGGGTGGTGGTGCCTCGATCGCTCGGGGCAGAGAATCGAACGGAGACCAACGTCCTCGCCACCGACGCTAAATCTCTT

Protein sequence

MSQSQNLNITFSSNMRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFATNFEYLESEMFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLFLESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL
Homology
BLAST of Carg22145 vs. NCBI nr
Match: KAG7025577.1 (hypothetical protein SDJN02_12074, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 550.8 bits (1418), Expect = 6.7e-153
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0

Query: 1   MSQSQNLNITFSSNMRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFA 60
           MSQSQNLNITFSSNMRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFA
Sbjct: 1   MSQSQNLNITFSSNMRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFA 60

Query: 61  TNFEYLESEMFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQ 120
           TNFEYLESEMFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQ
Sbjct: 61  TNFEYLESEMFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQ 120

Query: 121 LKTLIQVSGGLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYL 180
           LKTLIQVSGGLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYL
Sbjct: 121 LKTLIQVSGGLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYL 180

Query: 181 GYTGLVEAAPVLLFLESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNL 240
           GYTGLVEAAPVLLFLESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNL
Sbjct: 181 GYTGLVEAAPVLLFLESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNL 240

Query: 241 ISTLANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL 283
           ISTLANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL
Sbjct: 241 ISTLANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL 282

BLAST of Carg22145 vs. NCBI nr
Match: XP_022960201.1 (desiccation-related protein PCC13-62-like [Cucurbita moschata])

HSP 1 Score: 522.7 bits (1345), Expect = 2.0e-144
Identity = 264/268 (98.51%), Postives = 266/268 (99.25%), Query Frame = 0

Query: 15  MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFATNFEYLESEMFLWG 74
           MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQ++VFATNFEY E EMFLWG
Sbjct: 1   MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQVVVFATNFEYFEGEMFLWG 60

Query: 75  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 134
           ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ
Sbjct: 61  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 120

Query: 135 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 194
           RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF
Sbjct: 121 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 180

Query: 195 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 254
           LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK
Sbjct: 181 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 240

Query: 255 DEGVVVPRSLGAENRTETNVLATDAKSL 283
           DEGVVVPRSLGAENRTETNVLATDAKSL
Sbjct: 241 DEGVVVPRSLGAENRTETNVLATDAKSL 268

BLAST of Carg22145 vs. NCBI nr
Match: KAG6593187.1 (hypothetical protein SDJN03_12663, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 522.7 bits (1345), Expect = 2.0e-144
Identity = 265/268 (98.88%), Postives = 267/268 (99.63%), Query Frame = 0

Query: 15  MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFATNFEYLESEMFLWG 74
           MRNPSFFSTLFLVVALVFNSSR VVCQILGQC+SGPASDSQI+VFATNFEYLESEMFLWG
Sbjct: 1   MRNPSFFSTLFLVVALVFNSSRFVVCQILGQCQSGPASDSQIVVFATNFEYLESEMFLWG 60

Query: 75  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 134
           ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ
Sbjct: 61  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 120

Query: 135 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 194
           RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF
Sbjct: 121 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 180

Query: 195 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 254
           LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK
Sbjct: 181 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 240

Query: 255 DEGVVVPRSLGAENRTETNVLATDAKSL 283
           DEGVVVPRSLGAENRTETNVLATDAKSL
Sbjct: 241 DEGVVVPRSLGAENRTETNVLATDAKSL 268

BLAST of Carg22145 vs. NCBI nr
Match: XP_023515237.1 (desiccation-related protein PCC13-62-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 504.2 bits (1297), Expect = 7.2e-139
Identity = 255/268 (95.15%), Postives = 261/268 (97.39%), Query Frame = 0

Query: 15  MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFATNFEYLESEMFLWG 74
           MRNPSFFS LF VVAL F+SSRVVVCQILGQCRSG A DSQ+IVFATNFEYLE EMFLWG
Sbjct: 1   MRNPSFFSILFFVVALAFSSSRVVVCQILGQCRSGSALDSQVIVFATNFEYLEGEMFLWG 60

Query: 75  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 134
           ALGRGMDSIDPTLARGGPPPIGAQRANLDP+VRNIIEEFGYEEIGQLKTLIQVSGGLGIQ
Sbjct: 61  ALGRGMDSIDPTLARGGPPPIGAQRANLDPIVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 120

Query: 135 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 194
           RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAP+LLF
Sbjct: 121 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPLLLF 180

Query: 195 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 254
           LESR+LAAKLLSAESGQ+AVMRTLLYERANETVEPYNMTVAEFTNL STLANQLGKCGLK
Sbjct: 181 LESRKLAAKLLSAESGQSAVMRTLLYERANETVEPYNMTVAEFTNLTSTLANQLGKCGLK 240

Query: 255 DEGVVVPRSLGAENRTETNVLATDAKSL 283
           DEGVVVPRSLGAENRTETNVLATDAKSL
Sbjct: 241 DEGVVVPRSLGAENRTETNVLATDAKSL 268

BLAST of Carg22145 vs. NCBI nr
Match: XP_023004612.1 (desiccation-related protein PCC13-62-like [Cucurbita maxima])

HSP 1 Score: 488.4 bits (1256), Expect = 4.1e-134
Identity = 245/268 (91.42%), Postives = 255/268 (95.15%), Query Frame = 0

Query: 15  MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFATNFEYLESEMFLWG 74
           MRNPSFFSTLF VVAL F+SSRVVVCQILGQC+S PA DSQ++ FATN EYLE EMFLWG
Sbjct: 1   MRNPSFFSTLFFVVALAFSSSRVVVCQILGQCQSRPALDSQVVEFATNLEYLEGEMFLWG 60

Query: 75  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 134
           ALGRGMDSIDPTLARGGPPPIGA+RANLDP+VRNIIEEFGYEEIGQLKTLIQVSGGLGIQ
Sbjct: 61  ALGRGMDSIDPTLARGGPPPIGAERANLDPIVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 120

Query: 135 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 194
           RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAP+L  
Sbjct: 121 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPLLSL 180

Query: 195 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 254
           LESR+L AKLL+AESGQ+AVMRTLLYERANETVEPYNMTVAEFTNL STL NQLGKCGLK
Sbjct: 181 LESRKLGAKLLAAESGQSAVMRTLLYERANETVEPYNMTVAEFTNLTSTLVNQLGKCGLK 240

Query: 255 DEGVVVPRSLGAENRTETNVLATDAKSL 283
           DEGVVVPRSLGAENRTETNVLATD KSL
Sbjct: 241 DEGVVVPRSLGAENRTETNVLATDTKSL 268

BLAST of Carg22145 vs. ExPASy Swiss-Prot
Match: P22242 (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.3e-60
Identity = 118/233 (50.64%), Postives = 156/233 (66.95%), Query Frame = 0

Query: 50  PASDSQIIVFATNFEYLESEMFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNI 109
           P SD  ++ F  N E LE+E F W A G+G+D ++P LA+GGP PIG Q+ANL P +R+I
Sbjct: 36  PKSDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKGGPSPIGVQKANLSPFIRDI 95

Query: 110 IEEFGYEEIGQLKTLIQVSGGLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIH 169
           I +F Y+E G ++ +   S   G  RPLL+LS   F+ + D A G+ L PPFDPY + I+
Sbjct: 96  IAQFAYQEFGHVRAI--QSSVEGFPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDIN 155

Query: 170 FLLAVNLFPYLGYTGLVEAAPVLLFLESRRLAAKLLSAESGQNAVMRTLLYERANETVEP 229
           +LLA  + PY+G TG V A P L    SR+L A LL+ E+GQ+A++R LLYERA + VEP
Sbjct: 156 YLLACYVVPYVGLTGYVGANPKLESPVSRKLVAGLLAVEAGQDAIIRALLYERATDKVEP 215

Query: 230 YNMTVAEFTNLISTLANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL 283
           Y +TVAEFTN IS L N+LG  G+KD G++V   LGAE +   NVLA D  SL
Sbjct: 216 YGITVAEFTNKISELRNKLGDKGVKDLGLIVEPELGAEGKISGNVLAGDKNSL 266

BLAST of Carg22145 vs. ExPASy TrEMBL
Match: A0A6J1H6Z4 (desiccation-related protein PCC13-62-like OS=Cucurbita moschata OX=3662 GN=LOC111461010 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.5e-145
Identity = 264/268 (98.51%), Postives = 266/268 (99.25%), Query Frame = 0

Query: 15  MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFATNFEYLESEMFLWG 74
           MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQ++VFATNFEY E EMFLWG
Sbjct: 1   MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQVVVFATNFEYFEGEMFLWG 60

Query: 75  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 134
           ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ
Sbjct: 61  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 120

Query: 135 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 194
           RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF
Sbjct: 121 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 180

Query: 195 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 254
           LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK
Sbjct: 181 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 240

Query: 255 DEGVVVPRSLGAENRTETNVLATDAKSL 283
           DEGVVVPRSLGAENRTETNVLATDAKSL
Sbjct: 241 DEGVVVPRSLGAENRTETNVLATDAKSL 268

BLAST of Carg22145 vs. ExPASy TrEMBL
Match: A0A6J1KQW9 (desiccation-related protein PCC13-62-like OS=Cucurbita maxima OX=3661 GN=LOC111497857 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134
Identity = 245/268 (91.42%), Postives = 255/268 (95.15%), Query Frame = 0

Query: 15  MRNPSFFSTLFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFATNFEYLESEMFLWG 74
           MRNPSFFSTLF VVAL F+SSRVVVCQILGQC+S PA DSQ++ FATN EYLE EMFLWG
Sbjct: 1   MRNPSFFSTLFFVVALAFSSSRVVVCQILGQCQSRPALDSQVVEFATNLEYLEGEMFLWG 60

Query: 75  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 134
           ALGRGMDSIDPTLARGGPPPIGA+RANLDP+VRNIIEEFGYEEIGQLKTLIQVSGGLGIQ
Sbjct: 61  ALGRGMDSIDPTLARGGPPPIGAERANLDPIVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 120

Query: 135 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 194
           RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAP+L  
Sbjct: 121 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPLLSL 180

Query: 195 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 254
           LESR+L AKLL+AESGQ+AVMRTLLYERANETVEPYNMTVAEFTNL STL NQLGKCGLK
Sbjct: 181 LESRKLGAKLLAAESGQSAVMRTLLYERANETVEPYNMTVAEFTNLTSTLVNQLGKCGLK 240

Query: 255 DEGVVVPRSLGAENRTETNVLATDAKSL 283
           DEGVVVPRSLGAENRTETNVLATD KSL
Sbjct: 241 DEGVVVPRSLGAENRTETNVLATDTKSL 268

BLAST of Carg22145 vs. ExPASy TrEMBL
Match: A0A0A0K965 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396330 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 3.5e-91
Identity = 176/270 (65.19%), Postives = 218/270 (80.74%), Query Frame = 0

Query: 15  MRNPS--FFSTLFLVVALVFNSSRVVVC-QILGQCRSGPASDSQIIVFATNFEYLESEMF 74
           M+N S  F+S  F +V L    SRVVVC  I+ QC+   A D +++ FA+NFEYLE E F
Sbjct: 11  MKNASIIFWSWFFFLVYL----SRVVVCNNIIDQCQPMVAPDIEVVRFASNFEYLEGEFF 70

Query: 75  LWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGL 134
           L  ALG G+DSI+P LA GGPPPIGAQ+ANLDP+  NI +EFGY+EIGQL+++I+ +GG 
Sbjct: 71  LHCALGEGIDSINPNLAFGGPPPIGAQKANLDPVTANIAKEFGYQEIGQLRSVIEAAGGR 130

Query: 135 GIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPV 194
           GI+RPLLNLSK+VFSD+FD+A G +L P FDPY ++I+FLLA N+FPY G  GLV A P+
Sbjct: 131 GIKRPLLNLSKEVFSDIFDEAIGFKLEPRFDPYSNSINFLLAANMFPYTGLVGLVGATPL 190

Query: 195 LLFLESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKC 254
           LL  +SR+LAA LL AESGQNAV+RTLLY+RANETV+PYN+TVAEFTNL STLAN+LGKC
Sbjct: 191 LLLPQSRKLAASLLGAESGQNAVIRTLLYQRANETVDPYNITVAEFTNLTSTLANKLGKC 250

Query: 255 GLKDEGVVVPRSLGAENRTETNVLATDAKS 282
           GL+DEG++VP SLGAENRTE+N+LA D  S
Sbjct: 251 GLRDEGIMVPLSLGAENRTESNILAADVNS 276

BLAST of Carg22145 vs. ExPASy TrEMBL
Match: A0A1S3BT08 (desiccation-related protein PCC13-62-like OS=Cucumis melo OX=3656 GN=LOC103492834 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 3.2e-84
Identity = 157/231 (67.97%), Postives = 190/231 (82.25%), Query Frame = 0

Query: 51  ASDSQIIVFATNFEYLESEMFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNII 110
           A D +++ FA+NFEYLE E FL  ALG+G+DSI+P LA GGPPPIGAQ+ANLD +   + 
Sbjct: 3   APDIEVVRFASNFEYLEGEFFLHSALGKGIDSINPNLAFGGPPPIGAQKANLDHVTAKMA 62

Query: 111 EEFGYEEIGQLKTLIQVSGGLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHF 170
           EEFG +EIGQL+ +I+ +GG GI+RPLLNLSK+VFSD+FDKA G +L P FDPY ++I+F
Sbjct: 63  EEFGNQEIGQLRAVIEAAGGRGIKRPLLNLSKEVFSDIFDKAIGFKLKPRFDPYSNSINF 122

Query: 171 LLAVNLFPYLGYTGLVEAAPVLLFLESRRLAAKLLSAESGQNAVMRTLLYERANETVEPY 230
           LLA NLFPY G  GLV A P+LL  +SR+LAA LL AESGQNAV+RTLLY+RANETV PY
Sbjct: 123 LLAANLFPYTGLVGLVGATPLLLLPQSRKLAASLLGAESGQNAVIRTLLYQRANETVHPY 182

Query: 231 NMTVAEFTNLISTLANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKS 282
           N+TVAEFTN  STLAN+L  CGLKDEG++VPRSLGAENRTE+N+LA D  S
Sbjct: 183 NITVAEFTNRTSTLANKLANCGLKDEGIIVPRSLGAENRTESNILAADVYS 233

BLAST of Carg22145 vs. ExPASy TrEMBL
Match: A0A6J1DBY4 (desiccation-related protein PCC13-62-like OS=Momordica charantia OX=3673 GN=LOC111018919 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.1e-81
Identity = 163/268 (60.82%), Postives = 201/268 (75.00%), Query Frame = 0

Query: 17  NPSFFSTLFLVVALVFNSSRVVVCQI-LGQCRSG-PASDSQIIVFATNFEYLESEMFLWG 76
           NPS F  L L VA   + + VVV  + L  C+S         +VFATNFEYLE EM+  G
Sbjct: 4   NPSSFWALLLFVAWAASLNGVVVRTLGLSPCQSTIVVPPLATLVFATNFEYLEGEMYFHG 63

Query: 77  ALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQ 136
           ALG+G DS+ P L   GPPPIGAQ ANL+P VR IIEEFGYEE+GQL+ +++ +GG+G+ 
Sbjct: 64  ALGKGFDSLYPNLTFEGPPPIGAQIANLEPPVRQIIEEFGYEEVGQLRKILEATGGVGVS 123

Query: 137 RPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLF 196
           RPLLNLSK+ F+++FDKA G +L PPFDPY +T +FLLA+ +FPY+G   LV+AAP    
Sbjct: 124 RPLLNLSKEAFAEIFDKAVGFKLVPPFDPYANTTNFLLAIAIFPYIGQVALVDAAPAFPT 183

Query: 197 LESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNMTVAEFTNLISTLANQLGKCGLK 256
           L  R  AA +L+ E+GQ++V+RTLLY RANETV PYN+TVAEFTN  + LAN+LG+CGLK
Sbjct: 184 LNYRXTAAAVLALEAGQSSVIRTLLYLRANETVFPYNLTVAEFTNRTAALANRLGRCGLK 243

Query: 257 DEGVVVPRSLGAENRTETNVLATDAKSL 283
           DEGVVVP SLGAENRTETNVLA D KSL
Sbjct: 244 DEGVVVPPSLGAENRTETNVLAGDDKSL 271

BLAST of Carg22145 vs. TAIR 10
Match: AT3G62730.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, LP.02 two leaves visible, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits to 172 proteins in 41 species: Archae - 0; Bacteria - 73; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 255.4 bits (651), Expect = 5.4e-68
Identity = 133/260 (51.15%), Postives = 180/260 (69.23%), Query Frame = 0

Query: 24  LFLVVALVFNSSRVVVCQILGQCRSGPASDSQIIVFATNFEYLESEMFLWGALGRGMDSI 83
           L LV+A+  N ++   C   G      ASD   + FA N E+ E+E FL GA G+G+D+ 
Sbjct: 8   LVLVIAVDANPAKSGSCSCSGNI---SASDVDRVHFAMNLEFTEAEFFLKGATGKGLDAY 67

Query: 84  DPTLARGGPPPIGAQRANLDPMVRNIIEEFGYEEIGQLKTLIQVSGGLGIQRPLLNLSKD 143
           + TLA+GGPPPIGA++ANLDP+   IIEEFGY+EIG L+ +  ++G  GI RPL+NL+++
Sbjct: 68  NATLAKGGPPPIGAKKANLDPITNRIIEEFGYQEIGHLRAITDMTG--GIPRPLINLTRE 127

Query: 144 VFSDLFDKAAGRRLSPPFDPYVDTIHFLLAVNLFPYLGYTGLVEAAPVLLFLESRRLAAK 203
            F+   D+A GR+ +P FDPY +++++LLA    PY+G TG V   P L++   ++L A 
Sbjct: 128 NFAVFMDRAVGRKSNPRFDPYANSLNYLLASYYIPYVGLTGYVGTIPYLVYFNIKKLVAG 187

Query: 204 LLSAESGQNAVMRTLLYERANETVEPY-NMTVAEFTNLISTLANQLGKCGLKDEGVVVPR 263
           LL  ESGQ+AV+RTLLYER NE VE Y  +TVAE TN IS L N+LG CG+KDEG+ VP 
Sbjct: 188 LLGVESGQDAVIRTLLYERQNEKVEEYGGVTVAELTNEISNLRNELGMCGIKDEGLCVPL 247

Query: 264 SLGAENRTETNVLATDAKSL 283
            LGAENRT +N+L+ D  SL
Sbjct: 248 WLGAENRTTSNILSADPYSL 262

BLAST of Carg22145 vs. TAIR 10
Match: AT1G47980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 222.6 bits (566), Expect = 3.9e-58
Identity = 114/230 (49.57%), Postives = 156/230 (67.83%), Query Frame = 0

Query: 53  DSQIIVFATNFEYLESEMFLWGALGRGMDSIDPTLARGGPPPIGAQRANLDPMVRNIIEE 112
           D +++ F  N EYLE+E FL+GALG G+D + P L  GGP PIGAQ+ANLDP+ R+II +
Sbjct: 43  DRKLLEFPLNLEYLEAEFFLFGALGLGLDKVAPNLTMGGPSPIGAQKANLDPLTRDIILQ 102

Query: 113 FGYEEIGQLKTLIQVSGGLGIQRPLLNLSKDVFSDLFDKAAGRRLSPPFDPYVDTIHFLL 172
           F ++E+G L+ + +   G    RP L+LSK  F+ + DKA G +  PPF+PY ++ ++L+
Sbjct: 103 FAWQEVGHLRAIKKTVKGFA--RPQLDLSKKAFAKVMDKAFGVKFVPPFNPYANSYNYLI 162

Query: 173 AVNLFPYLGYTGLVEAAPVLLFLESRRLAAKLLSAESGQNAVMRTLLYERANETVEPYNM 232
           A  L PY+G TG V A P L    SR+L A LL  ESGQ+AV+R +LY RA   V PY +
Sbjct: 163 ASYLVPYVGLTGYVGANPKLQCPASRKLVAGLLGVESGQDAVIRGMLYARAAHIVYPYGV 222

Query: 233 TVAEFTNLISTLANQLGKCGLKDEGVVVPRSLGAENRTETNVLATDAKSL 283
           TVA FT+ IS L N+LGK G+KDEG++VP+ +GAE +   NVL  +  SL
Sbjct: 223 TVAAFTDKISDLRNKLGKAGVKDEGLIVPKFMGAEGQVIGNVLVGNELSL 270

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7025577.16.7e-153100.00hypothetical protein SDJN02_12074, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022960201.12.0e-14498.51desiccation-related protein PCC13-62-like [Cucurbita moschata][more]
KAG6593187.12.0e-14498.88hypothetical protein SDJN03_12663, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023515237.17.2e-13995.15desiccation-related protein PCC13-62-like [Cucurbita pepo subsp. pepo][more]
XP_023004612.14.1e-13491.42desiccation-related protein PCC13-62-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
P222425.3e-6050.64Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum OX=4153 PE=2 ... [more]
Match NameE-valueIdentityDescription
A0A6J1H6Z49.5e-14598.51desiccation-related protein PCC13-62-like OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1KQW92.0e-13491.42desiccation-related protein PCC13-62-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A0A0K9653.5e-9165.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396330 PE=4 SV=1[more]
A0A1S3BT083.2e-8467.97desiccation-related protein PCC13-62-like OS=Cucumis melo OX=3656 GN=LOC10349283... [more]
A0A6J1DBY41.1e-8160.82desiccation-related protein PCC13-62-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
Match NameE-valueIdentityDescription
AT3G62730.15.4e-6851.15unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G47980.13.9e-5849.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13668Ferritin_2coord: 52..221
e-value: 4.7E-21
score: 75.4
NoneNo IPR availablePANTHERPTHR31694:SF12PROTEIN PCC13-62, PUTATIVE, EXPRESSED-RELATEDcoord: 21..282
NoneNo IPR availablePANTHERPTHR31694DESICCATION-LIKE PROTEINcoord: 21..282

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22145-RACarg22145-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane