Carg22137 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22137
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pentatricopeptide repeat superfamily protein, putative isoform 2
Location	Carg_Chr18: 11504313 .. 11506270 (-)
RNA-Seq Expression	Carg22137
Synteny	Carg22137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGCACAACTTCTTTGAGAAAATGCCTGTGGATCACCTACTTCAATAGCGCGTTACCAAGGAAAAAGAAAAGTTGAGAGAATGATCGAAACTGCTCTGGCCGTGCGATTCCCCGCCGGCGCCAACTTCTGCTACTCCTCCGCTTTGTCTCGTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCTGCCGTTACTTTCGAAGTTGAACTAAACTTCCGTGCTGCATGATGCTTTTGCTCGAATTCTAAGAAGGAGAGAGGAAAACGATTTGTCGATTACTGAACAACTTGCTTTCTGTTGGATGCATTGGAGCTAAAGACTCCATAGCTTTTGGCGTTTTTTCCTGCATTTTTCTTGGCTGCAAAGCTGTGACTAATTTCTATTTTCTGTATTTTCGAATTAAGTGAAAGAGGAAGAGGAAACAATTGTTCTTATTGCGTTACTTGATTTCTATTGAAAACTATGGAGCTCTCATTCCTTTGCCTTTCTTGTTGCTGTTTTCTCTCTCATTCTCTCGGATGCCAAGCTCAGAGCCGGAGACTAGATTTCTTTATTCATTTTCCTATTAAGTGAAAGAGGAAGAGGAAACAATTGTTGTTGTTGCGTTACTTGATTTCTATTGAAAACTATGGAGCTCACGTTCCTTTGCCTTTCTTGTTGTTGCTGTTTTCTCTCTCATTTTCTCGGATGCCAAGCTCAGAGCCGGAGACTAGATTTCTTTATTATTTTTCCTATTAAGTGAAAGAGGAAGAGGAAACAATTGTTTTGTTTGCTTACTTGATCTCTATTTTAAGCAATGAAGCTTAAGATTCCACAGACGTTCTCTACAGATTTTTCCGGCATTTTCTCGGTTCCTTGCTGAGACTATTTTTCTTCTTTGCTTTTTGTTGTTTGCATATACAGATCACCGTTCAGCTTGGACTTCGGAGGATGTGACTAATATAGGCCATGCTAGCGGCTTTTGTCGGCTTTTGCATTCTTGCGCTTCCGACGTGCAATGGTACTTGAGCTTGCTCTTTTCTTTTCCTCCGTTTTTTAATTTTTTCGATGAGTTTCTTTGTGAAATGCGCGTGCGGATTCTTGACTCCTAATCCTGCTTCCGTTAAAATTATATCCGCTGAGCGGAAATCGCAATAAATTGAATATCGTAGAAGTCTGATTTGAACGCAAAATTTATGGTTAACAAATACTTGGAAGTATTTAATCTACGATCCATACCTAATACAACAAGAGAGAATTCATAATTCAGATAGCGCGTTTTTATCTTAAGAATCCATTATAAGATGCGGTCTTCTCATTATGGAATCGCAATTAGCAAGCATCGGAAGGATTGATATTATAGGCAACTGCGTTGTTTGAGATCTTTCTGAAAAGATTGTGTATCTGATGGTGATGCTTACTCGATCACAGTTGTGCTCTTTGCATGTTATGTATGCACATATATTATAAGTATTCAGTAAGGAGAACCTTAACCAAACGGTTCCTCTCTGTTTATGATATGTAAAAACCTCCGAAGACAAGGATTCAATCTTTATTAAGTGGAAATATCGAATTTAATCACATGTATGCAGAATGCAATGGAAACGTCTGGACACGCATCACAATTTCAGACATTAGGAATGAATGATTAGAATTCTAAATCCCGATATCTTGCTTGCAGGAAAAGATGCCGAAGCCTTAACAGTAAGTCCTTCTTGGAAAGGAACAATTTCAGAAAAAATGGAATTCATGCATCGGCAGAGAATTTGGGTTCTGCGTCAGATCCAATTAAACAAAATAGGAGACAATATCATCCATCCGAGGAGCTCGTGAAATCAAGATCAGAGAATGCCGAGGATGTTAGACCTACTGCCGCAGAAACTAGTAGAACAATCGTTGAGGTATCAGTTTATACTAATGCTCTTCTCAATCTTCATACTTATTTGTGA

mRNA sequence

AACGCACAACTTCTTTGAGAAAATGCCTGTGGATCACCTACTTCAATAGCGCGTTACCAAGGAAAAAGAAAAGTTGAGAGAATGATCGAAACTGCTCTGGCCGTGCGATTCCCCGCCGGCGCCAACTTCTGCTACTCCTCCGCTTTGTCTCATCACCGTTCAGCTTGGACTTCGGAGGATGTGACTAATATAGGCCATGCTAGCGGCTTTTGTCGGCTTTTGCATTCTTGCGCTTCCGACGTGCAATGGAAAAGATGCCGAAGCCTTAACAGTAAGTCCTTCTTGGAAAGGAACAATTTCAGAAAAAATGGAATTCATGCATCGGCAGAGAATTTGGGTTCTGCGTCAGATCCAATTAAACAAAATAGGAGACAATATCATCCATCCGAGGAGCTCGTGAAATCAAGATCAGAGAATGCCGAGGATGTTAGACCTACTGCCGCAGAAACTAGTAGAACAATCGTTGAGGTATCAGTTTATACTAATGCTCTTCTCAATCTTCATACTTATTTGTGA

Coding sequence (CDS)

ATGATCGAAACTGCTCTGGCCGTGCGATTCCCCGCCGGCGCCAACTTCTGCTACTCCTCCGCTTTGTCTCATCACCGTTCAGCTTGGACTTCGGAGGATGTGACTAATATAGGCCATGCTAGCGGCTTTTGTCGGCTTTTGCATTCTTGCGCTTCCGACGTGCAATGGAAAAGATGCCGAAGCCTTAACAGTAAGTCCTTCTTGGAAAGGAACAATTTCAGAAAAAATGGAATTCATGCATCGGCAGAGAATTTGGGTTCTGCGTCAGATCCAATTAAACAAAATAGGAGACAATATCATCCATCCGAGGAGCTCGTGAAATCAAGATCAGAGAATGCCGAGGATGTTAGACCTACTGCCGCAGAAACTAGTAGAACAATCGTTGAGGTATCAGTTTATACTAATGCTCTTCTCAATCTTCATACTTATTTGTGA

Protein sequence

MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCRSLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTAAETSRTIVEVSVYTNALLNLHTYL

Homology

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: KAG7013269.1 (hypothetical protein SDJN02_26027 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.3 bits (734), Expect = 7.1e-74
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVSVYTNALLNLHTYL 145
           AETSRTIVEVSVYTNALLNLHTYL
Sbjct: 121 AETSRTIVEVSVYTNALLNLHTYL 144

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: XP_023522718.1 (uncharacterized protein At3g49140-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AETSRTI+EV+
Sbjct: 121 AETSRTIIEVN 131

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: KAG6574205.1 (hypothetical protein SDJN03_28092, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AETSRTI+EV+
Sbjct: 121 AETSRTIIEVN 131

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: XP_023522719.1 (uncharacterized protein At3g49140-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AETSRTI+EV+
Sbjct: 121 AETSRTIIEVN 131

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: XP_023541607.1 (uncharacterized protein At3g49140-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 2.7e-65
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AETSRTI+EV+
Sbjct: 121 AETSRTIIEVN 131

[Close]

BLAST of Carg22137 vs. ExPASy Swiss-Prot
Match: Q0WMN5 (Uncharacterized protein At3g49140 OS=Arabidopsis thaliana OX=3702 GN=At3g49140 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 6.1e-12
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIE+ +AVR   G  FC S+AL  +R+A +SE+  N  H        ++     Q +R  
Sbjct: 1   MIESVMAVRLSTG--FCSSTALLQYRTAPSSEEGGNCFH--------YASRRVFQPQRIH 60

Query: 61  SLNSKSFLE-------RNNFRKNGIHASAENLGSASDPIKQ-NRRQYHPSEELVKSRSEN 120
            ++   FL+       R + RKN   A+AE + SASDP KQ  + +YHPSEE+  S  +N
Sbjct: 61  HIDGSGFLKYNSDYITRKHLRKNRTQATAEYVDSASDPEKQTGKSRYHPSEEIRASLPQN 120

Query: 121 AEDVRPTAAETSRTIVEVS 132
             D R + AET+RTI+EV+
Sbjct: 121 DGDSRLSPAETTRTIIEVN 129

[Close]

BLAST of Carg22137 vs. ExPASy TrEMBL
Match: A0A6J1G1V9 (uncharacterized protein At3g49140-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449932 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.8e-65
Identity = 127/131 (96.95%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAENL SASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAENLSSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AET+RTI+EV+
Sbjct: 121 AETTRTIIEVN 131

[Close]

BLAST of Carg22137 vs. ExPASy TrEMBL
Match: A0A6J1HY16 (uncharacterized protein At3g49140-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467691 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.0e-65
Identity = 126/131 (96.18%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDP+KQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPLKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AET+RTI+EV+
Sbjct: 121 AETTRTIIEVN 131

[Close]

BLAST of Carg22137 vs. ExPASy TrEMBL
Match: A0A6J1HTI8 (uncharacterized protein At3g49140-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467691 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.0e-65
Identity = 126/131 (96.18%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDP+KQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPLKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AET+RTI+EV+
Sbjct: 121 AETTRTIIEVN 131

[Close]

BLAST of Carg22137 vs. ExPASy TrEMBL
Match: A0A6J1JB77 (uncharacterized protein At3g49140-like OS=Cucurbita maxima OX=3661 GN=LOC111482881 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.5e-49
Identity = 104/132 (78.79%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRF  GANFCYSSALS+HR AWTSEDVT IGHA+  CRL  SCASDVQWKRC+
Sbjct: 1   MIETALAVRFSGGANFCYSSALSNHRPAWTSEDVTCIGHANSSCRLFQSCASDVQWKRCQ 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRR-QYHPSEELVKSRSENAEDVRPT 120
            LNS+S L +NN +KNGI ASAENLGSASDPIKQNRR QYHPSEE VKS +E AEDVRPT
Sbjct: 61  RLNSRSLLGKNNLKKNGIQASAENLGSASDPIKQNRRLQYHPSEEFVKSITEIAEDVRPT 120

Query: 121 AAETSRTIVEVS 132
           +AET+RTI+EV+
Sbjct: 121 SAETTRTIIEVN 132

[Close]

BLAST of Carg22137 vs. ExPASy TrEMBL
Match: A0A6J1CHK0 (uncharacterized protein At3g49140-like OS=Momordica charantia OX=3673 GN=LOC111011706 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48
Identity = 105/133 (78.95%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSAL-SHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRC 60
           MIETALAVRFPAGANFC+SS   S+HRSAW SEDVT+IGH S FCRLLHSCASDV WKRC
Sbjct: 1   MIETALAVRFPAGANFCFSSTTSSYHRSAWISEDVTSIGHPSSFCRLLHSCASDVHWKRC 60

Query: 61  RSLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRR-QYHPSEELVKSRSENAEDVRP 120
           + LNS+  L RN  R+NGI ASAE LGSASDPIKQN R QYHPSEELVKS +ENAEDVRP
Sbjct: 61  QRLNSRFLLGRNTLRRNGIQASAEPLGSASDPIKQNTRLQYHPSEELVKSITENAEDVRP 120

Query: 121 TAAETSRTIVEVS 132
           TAAET+RTI+EV+
Sbjct: 121 TAAETTRTIIEVN 133

[Close]

BLAST of Carg22137 vs. TAIR 10
Match: AT3G49140.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.4e-13
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIE+ +AVR   G  FC S+AL  +R+A +SE+  N  H        ++     Q +R  
Sbjct: 1   MIESVMAVRLSTG--FCSSTALLQYRTAPSSEEGGNCFH--------YASRRVFQPQRIH 60

Query: 61  SLNSKSFLE-------RNNFRKNGIHASAENLGSASDPIKQ-NRRQYHPSEELVKSRSEN 120
            ++   FL+       R + RKN   A+AE + SASDP KQ  + +YHPSEE+  S  +N
Sbjct: 61  HIDGSGFLKYNSDYITRKHLRKNRTQATAEYVDSASDPEKQTGKSRYHPSEEIRASLPQN 120

Query: 121 AEDVRPTAAETSRTIVEVS 132
             D R + AET+RTI+EV+
Sbjct: 121 DGDSRLSPAETTRTIIEVN 129

The following BLAST results are available for this feature:

BLAST of Carg22137 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013269.1	7.1e-74	100.00	hypothetical protein SDJN02_26027 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023522718.1	2.7e-65	97.71	uncharacterized protein At3g49140-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6574205.1	2.7e-65	97.71	hypothetical protein SDJN03_28092, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023522719.1	2.7e-65	97.71	uncharacterized protein At3g49140-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023541607.1	2.7e-65	97.71	uncharacterized protein At3g49140-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22137 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WMN5	6.1e-12	38.85	Uncharacterized protein At3g49140 OS=Arabidopsis thaliana OX=3702 GN=At3g49140 P...	[more]

BLAST of Carg22137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1V9	3.8e-65	96.95	uncharacterized protein At3g49140-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HY16	5.0e-65	96.18	uncharacterized protein At3g49140-like isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HTI8	5.0e-65	96.18	uncharacterized protein At3g49140-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1JB77	6.5e-49	78.79	uncharacterized protein At3g49140-like OS=Cucurbita maxima OX=3661 GN=LOC1114828...	[more]
A0A6J1CHK0	1.5e-48	78.95	uncharacterized protein At3g49140-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Carg22137 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49140.1	4.4e-13	38.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..118
None	No IPR available	PANTHER	PTHR13343:SF28	PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN	coord: 2..139
None	No IPR available	PANTHER	PTHR13343	CREG1 PROTEIN	coord: 2..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22137-RA	Carg22137-RA	mRNA