Carg22112 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22112
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	sec-independent protein translocase protein TATB, chloroplastic-like
Location	Carg_Chr18: 11398827 .. 11402662 (-)
RNA-Seq Expression	Carg22112
Synteny	Carg22112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGCTGACTCAGAAAGGACTGAAGCTGTGTTCATGGTCGTTCTCTTAGCCATGGCCTCCAAAGTTTCGGCCGCCACATTCCCATTTTCTCCGTCTTCCTCATCTTCTCTCGCTTCATCTTCCTTGCCCACGATACACTCCAGAAACCCTAAAATTCGTCTCTCCTTGTGTAATTTCCCACTGGGTCTCCGCCTTTTTTCTCCATGGAACGGTTTAAAGCATCTGGGTATTTCAACCAGAGGAAAGTTCATCGGTATGAATGTTCTTTGTATTATTGATTCGATTTCTTCTCATATTTGTATGAATTAAGTGTTTGTTGACTTTTTTCTTCATTTTTTATGTTCTTTGAAATGGATTTGTCGCAGAGAGGAGGAAGAGAATTCCGAAGGGGAAAGCAGTTTTTGCATCTTTGTTTGGGGTTGGAGCTCCTGAGGCATTGGTTATTGGGGTTGTGGCTCTGTTAGTGTTTGGTCCCAAGGGTCTTGCTGAGGTGAGTGGTTTGGATCATTTAGATGACAGAAAATTTGAAGATATTTGGCATCCTTAAATGTGTTTCTCTTGTTTATATATTATAGCTTGTGATAAAATTATGTACACAAATTATGTTTCTTCTTGTTTAAGGTATATTCTGTTTGGTTTTGAAGTTGTTGCTGTTGCTCAAAGTTGAACCCTAAACATAAAACCTGACTTACCTTAATACTCCAGTCTTTATTGTCATGAGCCACTGCGACATGAACCACTGTGTGATTAGTTAGTAGGTTTTATGGTTGTTGACGTCAAGGAAGTTAGCTTCTAATGTTATTGATAGGCCTCCGATTGTTAATGTACTTTCAAAAAAGCATGTGAGGGGAAGGGGTGGATGAGCTTGTTTGGTTTTGATTGGCTCGGACTAGATGTTGTTTCTCGATGGAGGAGGAGGTGCTTCAGATTTCTCCTTAACATCTCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCCCTTCAAGGGCTTTCCCTCAACGTTTTAAGACACGTCTGATTGGAAGAGGTTTCTACACCCTTATAATGAATATTTCGTTCCCCTCTTCAACGGATGTGGGATCTCACAATCCACCCCCTTGGAGGCCCAACGTCCTGCTAGTATACCGCCCAATGACTCGCTCTGATACCATTTATAACAGCCCAAGTCCACTGCTAGTAGATATCATTCTCTTCGGGGTTGCCCTTCAAGGGCTTCCCTTCAAGGTTTTAAAATGCATACCCTAATAAGAAATGGTTCGTTCCCCTCTCCAACCGAAGTGAGATCTCAGAGTTGGTATGGTGGAACGTATGCTATACTTCAAAACAAACTGAAATGCTGCACCCATTACTAGCAATACTTGATATGATTTTAAACATCTTGGTTAGGGGAGTGCAGTGTCTGTTCATGTCTTCCCCCAAGGGACTTCTGCAGGTGGAACTACATAATGAAAAAGTGATGGCATAGGCTGCCTCATAGGTGTCACTTGTGCTGAACTTTGTTTTTAAAAAACCTCAATATTAGTGGTTATCTGTGAGTATTCACCAAAATGAGAGAAGAACGCTGGGTTGGCTTTGGAGATCTCAAAAGACCCAGAAGGTCAATAAGTAGCTTGTTTATGTTTCCACAAGTTTGTAAAAAAAGTAAGAATGACTTCAAGTTTTGAGACTGAAACAATATGAAATTAGAAGATTGAATGTTAATGTTATTCAGTAATTTGTTGTTATAAATCGAGATGGGCAATCTTTGTGAGATCCCACATCAATTGGATAGGGAAACGAATCATTTCTTATAAGTATGTGAAAACCTCTCCCTAGTAGACGTGTTTTAAAAACCGTGAGGCTGACAGCGATACATAACGGGCCAAAGCAGGCAATATATGCTAGTGGTGGGTTTGGGCTATTACAAATGATATCAAAGCCAGACATCGAGCTGTGTGCCAGTAAGGATGCCGGGCTTCCAAGGGGGGTTGATTGTGAGACCGCACATCGGTTGGAGTGGGGAACGAAACATTCCTTATAAGGGTGTGGAAATCTCTCCCTAGTAGACACGTTTTAAAAATCGTGAAACTGACGGCAATGTGTAACGGGCTAAAGCGGACAATATCTGCAGTGGTGGGCTCGAGTTGTTACAAATGGTATCAGAGCCAGACACCGAGTTGTGTGCCAGCGAGGACGCTGGGCTCCCAAGGGGAGTAGATTATAAGATCCTACGTCGATTGGAGTGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCATAGTACGTATTTAAAAATCGTGAGGCTGATGGCGATACGTAACGAACCAAAGCAAACATGTCAACTTCGCCCACCCCAATGTCAACTTAGGGAGATTGAGCTTTCCACTTGGAGGCTGCTCCTTGTGGAAAGAATGTAGTTTGACTAAACTTATTTTTATGCAGGTTGCTCGGAATCTGGGGAAGACCTTACGTGCATTTCAACCCACCATAAGAGAGCTTCAGGTTACATTTCGGTTTTTTGAGATTTTCCAGCATGACTTCTTTGAGACCTTATGAACGTAGTTTATTGCTCTTCATTGGTCTATGTAGGATGTTTCTAGAGAATTCAAGACCACACTTGAGCGAGAAATTGGTCTCGATGAAATTTCGAGTTCGGTTAACAGCCCATACAATTCTAGCAGATCCAATACCTTCTCAAATCCACCTGTTTCTAAAGCACAAGATCCTGCTGCAGTAGCTGAACCCAGTGAGTGATTTGGTTATTTATCATCCATGTGCTTGTTTGTTAACAGTACTCATATCGTAACGAAAGGTTTCGAAGTTACATAGAAAGTCCTGCAGTTATATTCAACAGGAAGTGTCATAGATTATGGAACAGCCCCGCTGTCGGGCATCATGTCTATGAACTGATATCGATTATGATATGATTATGAAAGCTTGTTTTCAAATGTAGAAATCGCTGATGAATCTCCATCAGCAAGCAAAGCATATAGCTCTGAAGAGTACCTAAAGCTTACAGAAGAGCAGCTGAAAGTCCAAGCCAGTCTTGCAGCCCAAAGCGAGAGTGGATCCCAAGAACAGCCTCAAGGTTGCTAAATTCAAATCACTTCATTTCCCTCCCTCTCTATCTCTCTGACATATACGAACTTGTAACAGGAACTATTGGAGAACCGGCCACGATTACGCCTGGACCTCAAAATCTTGGAACAGGTAAAGCTGATGAATCTGCTGCCTCCGCTCCAAGACCTCAAAGTCCCGGAACCGAGACGTGAAGTTATTAGGATCGATTTTAGATCGACGAGAATTTGTAATTTCATCGATGTACTGGATTGACGTAGAAAATCTATTAGAATGATTTTGTCAATGCCTTGAAACTTAATCAGTTTCTAGACATTGGATATAATGATTTTGTTGGATTAGTAATGAGAATTCCCTCATGATATCACACATATGTCATAGCTGCAGCTGCCACTCTTGAATTGCATTCAAAAGAGCATAATTTGGAACAAGATTACAGTGTTCAAGTTTAAGATTTGTCATGGGAGAAGTGTCATGCCCACTTTTGAACCATCCTTTTATTGCATCAGCTTCGTATGTGAACCCATCTGCAGCAATGAGTGGATCTTTCATCATTTCCTGTAAAAACCAATAAAAAGTTAGGCATATTTCCTTCCTTTTGCTCTTTTCGGCACGACGCCAGGCATCGTTTGAATCGAATGAAGCATTACCTAGCACGAGTCTTACCTGAAAAATAGGACATGTGAAATGGGCAGGCACTCGAGAGTGTTGCTTCGAACCTGAAAACGATGCCGAGGCAATGGATCTCATAGGCTCCAAAACACT

mRNA sequence

TATGCTGACTCAGAAAGGACTGAAGCTGTGTTCATGGTCGTTCTCTTAGCCATGGCCTCCAAAGTTTCGGCCGCCACATTCCCATTTTCTCCGTCTTCCTCATCTTCTCTCGCTTCATCTTCCTTGCCCACGATACACTCCAGAAACCCTAAAATTCGTCTCTCCTTGTGTAATTTCCCACTGGGTCTCCGCCTTTTTTCTCCATGGAACGGTTTAAAGCATCTGGGTATTTCAACCAGAGGAAAGTTCATCGAGAGGAGGAAGAGAATTCCGAAGGGGAAAGCAGTTTTTGCATCTTTGTTTGGGGTTGGAGCTCCTGAGGCATTGGTTATTGGGGTTGTGGCTCTGTTAGTGTTTGGTCCCAAGGGTCTTGCTGAGGTTGCTCGGAATCTGGGGAAGACCTTACGTGCATTTCAACCCACCATAAGAGAGCTTCAGGATGTTTCTAGAGAATTCAAGACCACACTTGAGCGAGAAATTGGTCTCGATGAAATTTCGAGTTCGGTTAACAGCCCATACAATTCTAGCAGATCCAATACCTTCTCAAATCCACCTGTTTCTAAAGCACAAGATCCTGCTGCAGTAGCTGAACCCAAAATCGCTGATGAATCTCCATCAGCAAGCAAAGCATATAGCTCTGAAGAGTACCTAAAGCTTACAGAAGAGCAGCTGAAAGTCCAAGCCAGTCTTGCAGCCCAAAGCGAGAGTGGATCCCAAGAACAGCCTCAAGGAACTATTGGAGAACCGGCCACGATTACGCCTGGACCTCAAAATCTTGGAACAGGTAAAGCTGATGAATCTGCTGCCTCCGCTCCAAGACCTCAAAGTCCCGGAACCGAGACGTGAAGTTATTAGGATCGATTTTAGATCGACGAGAATTTGTAATTTCATCGATGTACTGGATTGACGTAGAAAATCTATTAGAATGATTTTGTCAATGCCTTGAAACTTAATCAGTTTCTAGACATTGGATATAATGATTTTGTTGGATTAGTAATGAGAATTCCCTCATGATATCACACATATGTCATAGCTGCAGCTGCCACTCTTGAATTGCATTCAAAAGAGCATAATTTGGAACAAGATTACAGTGTTCAAGTTTAAGATTTGTCATGGGAGAAGTGTCATGCCCACTTTTGAACCATCCTTTTATTGCATCAGCTTCGTATGTGAACCCATCTGCAGCAATGAGTGGATCTTTCATCATTTCCTGTAAAAACCAATAAAAAGTTAGGCATATTTCCTTCCTTTTGCTCTTTTCGGCACGACGCCAGGCATCGTTTGAATCGAATGAAGCATTACCTAGCACGAGTCTTACCTGAAAAATAGGACATGTGAAATGGGCAGGCACTCGAGAGTGTTGCTTCGAACCTGAAAACGATGCCGAGGCAATGGATCTCATAGGCTCCAAAACACT

Coding sequence (CDS)

ATGGTCGTTCTCTTAGCCATGGCCTCCAAAGTTTCGGCCGCCACATTCCCATTTTCTCCGTCTTCCTCATCTTCTCTCGCTTCATCTTCCTTGCCCACGATACACTCCAGAAACCCTAAAATTCGTCTCTCCTTGTGTAATTTCCCACTGGGTCTCCGCCTTTTTTCTCCATGGAACGGTTTAAAGCATCTGGGTATTTCAACCAGAGGAAAGTTCATCGAGAGGAGGAAGAGAATTCCGAAGGGGAAAGCAGTTTTTGCATCTTTGTTTGGGGTTGGAGCTCCTGAGGCATTGGTTATTGGGGTTGTGGCTCTGTTAGTGTTTGGTCCCAAGGGTCTTGCTGAGGTTGCTCGGAATCTGGGGAAGACCTTACGTGCATTTCAACCCACCATAAGAGAGCTTCAGGATGTTTCTAGAGAATTCAAGACCACACTTGAGCGAGAAATTGGTCTCGATGAAATTTCGAGTTCGGTTAACAGCCCATACAATTCTAGCAGATCCAATACCTTCTCAAATCCACCTGTTTCTAAAGCACAAGATCCTGCTGCAGTAGCTGAACCCAAAATCGCTGATGAATCTCCATCAGCAAGCAAAGCATATAGCTCTGAAGAGTACCTAAAGCTTACAGAAGAGCAGCTGAAAGTCCAAGCCAGTCTTGCAGCCCAAAGCGAGAGTGGATCCCAAGAACAGCCTCAAGGAACTATTGGAGAACCGGCCACGATTACGCCTGGACCTCAAAATCTTGGAACAGGTAAAGCTGATGAATCTGCTGCCTCCGCTCCAAGACCTCAAAGTCCCGGAACCGAGACGTGA

Protein sequence

MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNGLKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKAQDPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPATITPGPQNLGTGKADESAASAPRPQSPGTET

Homology

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BLAST of Carg22112 vs. NCBI nr
Match: KAG7013244.1 (Sec-independent protein translocase protein TATB, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 495.7 bits (1275), Expect = 2.5e-136
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG 60
           MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG
Sbjct: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG 60

Query: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKAQD 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKAQD
Sbjct: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKAQD 180

Query: 181 PAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPAT 240
           PAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPAT
Sbjct: 181 PAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPAT 240

Query: 241 ITPGPQNLGTGKADESAASAPRPQSPGTET 271
           ITPGPQNLGTGKADESAASAPRPQSPGTET
Sbjct: 241 ITPGPQNLGTGKADESAASAPRPQSPGTET 270

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BLAST of Carg22112 vs. NCBI nr
Match: KAG6574187.1 (Sec-independent protein translocase protein TATB, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 485.3 bits (1248), Expect = 3.3e-133
Identity = 263/264 (99.62%), Postives = 264/264 (100.00%), Query Frame = 0


Query: 7   MASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNGLKHLGI 66
           MASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPW+GLKHLGI
Sbjct: 1   MASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWSGLKHLGI 60

Query: 67  STRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRA 126
           STRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRA
Sbjct: 61  STRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRA 120

Query: 127 FQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKAQDPAAVAE 186
           FQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKAQDPAAVAE
Sbjct: 121 FQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKAQDPAAVAE 180

Query: 187 PKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPATITPGPQ 246
           PKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPATITPGPQ
Sbjct: 181 PKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPATITPGPQ 240

Query: 247 NLGTGKADESAASAPRPQSPGTET 271
           NLGTGKADESAASAPRPQSPGTET
Sbjct: 241 NLGTGKADESAASAPRPQSPGTET 264

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BLAST of Carg22112 vs. NCBI nr
Match: XP_022945576.1 (sec-independent protein translocase protein TATB, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 476.5 bits (1225), Expect = 1.5e-130
Identity = 262/271 (96.68%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG 60
           MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPW+G
Sbjct: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWSG 60

Query: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP-VSKAQ 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP VSKA+
Sbjct: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPSVSKAE 180

Query: 181 DPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPA 240
           DPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQA+LAA+SESGSQEQPQGT+ EPA
Sbjct: 181 DPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQANLAAESESGSQEQPQGTVEEPA 240

Query: 241 TITPGPQNLGTGKADESAASAPRPQSPGTET 271
           TI PGPQNLGTGKADESAASA RPQSPGTET
Sbjct: 241 TIAPGPQNLGTGKADESAASALRPQSPGTET 271

[Close]

BLAST of Carg22112 vs. NCBI nr
Match: XP_023541969.1 (sec-independent protein translocase protein TATB, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474.6 bits (1220), Expect = 5.9e-130
Identity = 264/277 (95.31%), Postives = 269/277 (97.11%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG 60
           MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPW+G
Sbjct: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWSG 60

Query: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNP-PVSKAQ 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNP  VSKA+
Sbjct: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPASVSKAE 180

Query: 181 DPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLK------VQASLAAQSESGSQEQPQG 240
           DPAAVAEP+IADESPSASKAYSSEEYLKLTEEQLK      VQA+LAA+SESGSQEQPQG
Sbjct: 181 DPAAVAEPEIADESPSASKAYSSEEYLKLTEEQLKAQEQLRVQANLAAESESGSQEQPQG 240

Query: 241 TIGEPATITPGPQNLGTGKADESAASAPRPQSPGTET 271
           TIGEPATITPGPQNLGTGKADESAASAPRPQSPGTET
Sbjct: 241 TIGEPATITPGPQNLGTGKADESAASAPRPQSPGTET 277

[Close]

BLAST of Carg22112 vs. NCBI nr
Match: XP_022968335.1 (sec-independent protein translocase protein TATB, chloroplastic [Cucurbita maxima])

HSP 1 Score: 456.8 bits (1174), Expect = 1.3e-124
Identity = 256/277 (92.42%), Postives = 263/277 (94.95%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG 60
           MVVLLAMASKVSAA FPFSPSSSSSLASSSLPTI+SR PKIRLSLCNFPLGLRLFSPW+G
Sbjct: 1   MVVLLAMASKVSAAKFPFSPSSSSSLASSSLPTIYSRIPKIRLSLCNFPLGLRLFSPWSG 60

Query: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGIST GKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 61  LKHLGISTSGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP-VSKAQ 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP VS+A+
Sbjct: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPSVSRAE 180

Query: 181 DPAAVAEPKIADESPSASKAYSSEEYLKLTE------EQLKVQASLAAQSESGSQEQPQG 240
           D AAVAEPKIADESPSASKAYSSEEYLKLTE      EQLKVQA+LAA+SESGSQEQPQG
Sbjct: 181 DSAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKAQEQLKVQANLAAESESGSQEQPQG 240

Query: 241 TIGEPATITPGPQNLGTGKADESAASAPRPQSPGTET 271
           T+ EPATI PGPQNLGT KADESAASAPRPQSPGTET
Sbjct: 241 TVEEPATIAPGPQNLGTSKADESAASAPRPQSPGTET 277

[Close]

BLAST of Carg22112 vs. ExPASy Swiss-Prot
Match: Q94G16 (Sec-independent protein translocase protein TATB, chloroplastic OS=Pisum sativum OX=3888 GN=TATB PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-48
Identity = 137/276 (49.64%), Postives = 172/276 (62.32%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG 60
           M   LA+AS  S         + S   S+  PT HS+     L    + LG RLF+PWNG
Sbjct: 1   MTPSLAIASSTSTMLLCPKLGTCSMSLSTCTPTSHSKIHHFHL----YSLGKRLFTPWNG 60

Query: 61  LKHLGISTRGK-----FIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAE 120
            K LG ST+ K     FI ++ R  KGK V+ASLFGVGAPEALVIGVVALLVFGPKGLAE
Sbjct: 61  FKQLGFSTKPKKPLFHFIGKKGRC-KGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAE 120

Query: 121 VARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPV 180
           VARNLGKTLR FQPTIRE+QDVSREFK+TLEREIG+D+I++ + S Y+S+  NT   P  
Sbjct: 121 VARNLGKTLREFQPTIREIQDVSREFKSTLEREIGIDDITNPLQSTYSSNVRNTTPTPSA 180

Query: 181 SKAQDPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLK-VQASLAAQSESGSQEQPQGT 240
           ++  + +  A     +     SKAYSSEEYLK+TEEQLK V A    Q+ S  +++ +  
Sbjct: 181 TEITNNSQTAVD--PNGKVDESKAYSSEEYLKITEEQLKAVAAQQQEQTSSPKEDEIEQQ 240

Query: 241 IGEPATITPGPQNLGTGKADESAASAPRPQSPGTET 271
           I  P              A+E+AA+ P PQ P +E+
Sbjct: 241 IQPP--------------ANETAATVPPPQKPESES 255

[Close]

BLAST of Carg22112 vs. ExPASy Swiss-Prot
Match: Q9XH75 (Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATB PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-43
Identity = 132/269 (49.07%), Postives = 169/269 (62.83%), Query Frame = 0


Query: 5   LAMASKVSAATFPFSPSSSSSLASS---SLPTIHSRNPKIRLSLCNF--PLGLRLFSPWN 64
           +AMA ++ A     S SSS ++  S   S P + SR    + +L ++   LG   FSP+ 
Sbjct: 1   MAMALQIIA-----SSSSSPTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYI 60

Query: 65  GLKHLGISTRGKFIE-RRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVAR 124
           GLKHLGIS   K     +KR  K   + ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR
Sbjct: 61  GLKHLGISISPKSSNPEKKRRCKSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVAR 120

Query: 125 NLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKA 184
           NLGKTLR FQPTIRELQDVSR+FK+TLEREIGLD+IS+   + YN +R+N    PP    
Sbjct: 121 NLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDDISTP--NVYNQNRTNPVQPPPPPPP 180

Query: 185 QDPAAVAEPKIADE--SPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIG 244
               +   P  A++     + KAY+SE+YLK TEEQLK  +   +Q+E  +Q Q      
Sbjct: 181 PSVPSTEAPVTANDPNDSQSPKAYTSEDYLKFTEEQLKALSPAESQTEDQTQTQEP---P 240

Query: 245 EPATI-TPGPQNLGTGKADESAASAPRPQ 265
           +P T+ TP  ++   G A E+ A++P  Q
Sbjct: 241 QPTTVQTPTGESQPNGTARETTAASPPRQ 259

[Close]

BLAST of Carg22112 vs. ExPASy Swiss-Prot
Match: O48950 (Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays OX=4577 GN=TATB PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.3e-35
Identity = 103/210 (49.05%), Postives = 124/210 (59.05%), Query Frame = 0


Query: 58  WNGLKHLGISTR--GKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAE 117
           W G++   I TR    F+    R  +   + ASLFGVGAPEALVIGVVALLVFGPKGLAE
Sbjct: 37  WKGVEWGSIQTRMVSSFVAVGSRTRRRNVICASLFGVGAPEALVIGVVALLVFGPKGLAE 96

Query: 118 VARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPV 177
           VARNLGKTLRAFQPTIRELQDVSREF++TLEREIG+DE+S S N  Y  +  N    P  
Sbjct: 97  VARNLGKTLRAFQPTIRELQDVSREFRSTLEREIGIDEVSQSTN--YRPTTMNNNQQP-- 156

Query: 178 SKAQDPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTI 237
             A DP    EP            Y+SEE +K+TEEQ+   A+ A   +  +  Q Q   
Sbjct: 157 --AADPNVKPEP----------APYTSEELMKVTEEQIAASAAAAWNPQQPATSQQQ--- 216

Query: 238 GEPATITPGPQNLGTGKADESAASAPRPQS 266
            E A  TP  ++  T    +  A+  R  S
Sbjct: 217 -EEAPTTPRSEDAPTSGGSDGPAAPARAVS 226

[Close]

BLAST of Carg22112 vs. ExPASy Swiss-Prot
Match: Q2R237 (Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATB PE=2 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 2.8e-34
Identity = 112/236 (47.46%), Postives = 141/236 (59.75%), Query Frame = 0


Query: 37  RNPKIRLSLCNFPLGLRLFSPWNGLKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPE 96
           R  ++ L+     LGL   S   G  H  +  R +  E  KR  +G  V+ASLFGVGAPE
Sbjct: 31  RRRRLTLAQPYCTLGLSFVS---GRHHRFLLRRRRRTE-SKRTSRGTGVYASLFGVGAPE 90

Query: 97  ALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISS 156
           ALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREF++TLEREIGLDE+  
Sbjct: 91  ALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFRSTLEREIGLDEVPP 150

Query: 157 SVNSPYNSSRSNTFSNPPVSKAQDPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQ 216
           S+N          +  P ++ +Q PA     + +D+ P A+  Y+SEE +K+TEEQL   
Sbjct: 151 SMN----------YRPPTMNNSQQPAI---DQSSDDKPEAA-PYTSEELIKVTEEQLAAS 210

Query: 217 ASLA--AQSESGSQEQPQGTIGEPATITPGPQNLGTGKADESAASAPRPQSPGTET 271
           A+ A   Q    SQ++      E      G  + G+  A  + +   R  S  TET
Sbjct: 211 AAAAWNTQEPPPSQQKEAAATSES---NDGAISRGSDGAGAAMSEPNRNISEKTET 245

[Close]

BLAST of Carg22112 vs. ExPASy Swiss-Prot
Match: Q8DJ44 (Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=tatA PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.8e-09
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 88  SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLER 147
           ++FG+G PE +VI VVALL+FGPK L E+ R+LGKT RAF+   RE QD  +     LE 
Sbjct: 2   NVFGIGLPELIVILVVALLIFGPKKLPEIGRSLGKTKRAFEEASREFQDEIKRQTAALEE 61

Query: 148 E 149
           E
Sbjct: 62  E 62

[Close]

BLAST of Carg22112 vs. ExPASy TrEMBL
Match: A0A6J1G1A2 (sec-independent protein translocase protein TATB, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449771 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.5e-131
Identity = 262/271 (96.68%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG 60
           MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPW+G
Sbjct: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWSG 60

Query: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP-VSKAQ 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP VSKA+
Sbjct: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPSVSKAE 180

Query: 181 DPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIGEPA 240
           DPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQA+LAA+SESGSQEQPQGT+ EPA
Sbjct: 181 DPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKVQANLAAESESGSQEQPQGTVEEPA 240

Query: 241 TITPGPQNLGTGKADESAASAPRPQSPGTET 271
           TI PGPQNLGTGKADESAASA RPQSPGTET
Sbjct: 241 TIAPGPQNLGTGKADESAASALRPQSPGTET 271

[Close]

BLAST of Carg22112 vs. ExPASy TrEMBL
Match: A0A6J1HWX7 (sec-independent protein translocase protein TATB, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467601 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 6.1e-125
Identity = 256/277 (92.42%), Postives = 263/277 (94.95%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLASSSLPTIHSRNPKIRLSLCNFPLGLRLFSPWNG 60
           MVVLLAMASKVSAA FPFSPSSSSSLASSSLPTI+SR PKIRLSLCNFPLGLRLFSPW+G
Sbjct: 1   MVVLLAMASKVSAAKFPFSPSSSSSLASSSLPTIYSRIPKIRLSLCNFPLGLRLFSPWSG 60

Query: 61  LKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120
           LKHLGIST GKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL
Sbjct: 61  LKHLGISTSGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 120

Query: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP-VSKAQ 180
           GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP VS+A+
Sbjct: 121 GKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPSVSRAE 180

Query: 181 DPAAVAEPKIADESPSASKAYSSEEYLKLTE------EQLKVQASLAAQSESGSQEQPQG 240
           D AAVAEPKIADESPSASKAYSSEEYLKLTE      EQLKVQA+LAA+SESGSQEQPQG
Sbjct: 181 DSAAVAEPKIADESPSASKAYSSEEYLKLTEEQLKAQEQLKVQANLAAESESGSQEQPQG 240

Query: 241 TIGEPATITPGPQNLGTGKADESAASAPRPQSPGTET 271
           T+ EPATI PGPQNLGT KADESAASAPRPQSPGTET
Sbjct: 241 TVEEPATIAPGPQNLGTSKADESAASAPRPQSPGTET 277

[Close]

BLAST of Carg22112 vs. ExPASy TrEMBL
Match: A0A6J1CJ51 (sec-independent protein translocase protein TATB, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.4e-97
Identity = 213/280 (76.07%), Postives = 234/280 (83.57%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLA------SSSLPTIHSRNPKIRLSLCNFPLGLRL 60
           MVVL  MASKVS  TFPFSPS SS+ +      SSS P +  + PKIRLSLCNFPLGL L
Sbjct: 1   MVVL--MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGL 60

Query: 61  FSPWNGLKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA 120
           FSPW GLKHLGISTR KF+ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA
Sbjct: 61  FSPWTGLKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA 120

Query: 121 EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP 180
           EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIS+SV+  YNSSRS+T+SNPP
Sbjct: 121 EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPP 180

Query: 181 -VSKAQDPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLK----VQASLAAQSESGSQE 240
            V KA+DP AVAEP   D SPS SKAY+SEEYLK+TEEQLK    VQ +LAA+S+SGSQ 
Sbjct: 181 SVPKAEDPVAVAEP--TDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQV 240

Query: 241 QPQGTIGEPATITPGPQNLGTGKADESAASAPRPQSPGTE 270
           + QG   EPAT   GP+NLGTG+++ESA SA  PQSPGTE
Sbjct: 241 EAQGVAEEPATAATGPRNLGTGESEESATSASGPQSPGTE 276

[Close]

BLAST of Carg22112 vs. ExPASy TrEMBL
Match: A0A6J1CJQ6 (sec-independent protein translocase protein TATB, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.2e-96
Identity = 212/280 (75.71%), Postives = 234/280 (83.57%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLA------SSSLPTIHSRNPKIRLSLCNFPLGLRL 60
           MVVL  MASKVS  TFPFSPS SS+ +      SSS P +  + PKIRLSLCNFPLGL L
Sbjct: 1   MVVL--MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGL 60

Query: 61  FSPWNGLKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA 120
           FSPW GLKHLGISTR KF+ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA
Sbjct: 61  FSPWTGLKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA 120

Query: 121 EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP 180
           EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIS+SV+  YNSSRS+T+SNPP
Sbjct: 121 EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPP 180

Query: 181 -VSKAQDPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLK----VQASLAAQSESGSQE 240
            V KA+DP AVAEP   + SPS SKAY+SEEYLK+TEEQLK    VQ +LAA+S+SGSQ 
Sbjct: 181 SVPKAEDPVAVAEP---NGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQV 240

Query: 241 QPQGTIGEPATITPGPQNLGTGKADESAASAPRPQSPGTE 270
           + QG   EPAT   GP+NLGTG+++ESA SA  PQSPGTE
Sbjct: 241 EAQGVAEEPATAATGPRNLGTGESEESATSASGPQSPGTE 275

[Close]

BLAST of Carg22112 vs. ExPASy TrEMBL
Match: A0A6J1CHV3 (sec-independent protein translocase protein TATB, chloroplastic isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011636 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 9.9e-91
Identity = 200/261 (76.63%), Postives = 218/261 (83.52%), Query Frame = 0


Query: 1   MVVLLAMASKVSAATFPFSPSSSSSLA------SSSLPTIHSRNPKIRLSLCNFPLGLRL 60
           MVVL  MASKVS  TFPFSPS SS+ +      SSS P +  + PKIRLSLCNFPLGL L
Sbjct: 1   MVVL--MASKVSVTTFPFSPSPSSACSRVAASTSSSSPILFPKTPKIRLSLCNFPLGLGL 60

Query: 61  FSPWNGLKHLGISTRGKFIERRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA 120
           FSPW GLKHLGISTR KF+ERR+RIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA
Sbjct: 61  FSPWTGLKHLGISTRAKFLERRRRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLA 120

Query: 121 EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPP 180
           EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEIS+SV+  YNSSRS+T+SNPP
Sbjct: 121 EVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISNSVDGSYNSSRSSTYSNPP 180

Query: 181 -VSKAQDPAAVAEPKIADESPSASKAYSSEEYLKLTEEQLK----VQASLAAQSESGSQE 240
            V KA+DP AVAEP   D SPS SKAY+SEEYLK+TEEQLK    VQ +LAA+S+SGSQ 
Sbjct: 181 SVPKAEDPVAVAEP--TDGSPSESKAYTSEEYLKVTEEQLKAQEQVQTNLAAESQSGSQV 240

Query: 241 QPQGTIGEPATITPGPQNLGT 251
           + QG   EPAT   GP+NLGT
Sbjct: 241 EAQGVAEEPATAATGPRNLGT 257

[Close]

BLAST of Carg22112 vs. TAIR 10
Match: AT5G52440.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-44
Identity = 132/269 (49.07%), Postives = 169/269 (62.83%), Query Frame = 0


Query: 5   LAMASKVSAATFPFSPSSSSSLASS---SLPTIHSRNPKIRLSLCNF--PLGLRLFSPWN 64
           +AMA ++ A     S SSS ++  S   S P + SR    + +L ++   LG   FSP+ 
Sbjct: 1   MAMALQIIA-----SSSSSPTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYI 60

Query: 65  GLKHLGISTRGKFIE-RRKRIPKGKAVFASLFGVGAPEALVIGVVALLVFGPKGLAEVAR 124
           GLKHLGIS   K     +KR  K   + ASLFGVGAPEALVIGVVALLVFGPKGLAEVAR
Sbjct: 61  GLKHLGISISPKSSNPEKKRRCKSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVAR 120

Query: 125 NLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDEISSSVNSPYNSSRSNTFSNPPVSKA 184
           NLGKTLR FQPTIRELQDVSR+FK+TLEREIGLD+IS+   + YN +R+N    PP    
Sbjct: 121 NLGKTLRTFQPTIRELQDVSRDFKSTLEREIGLDDISTP--NVYNQNRTNPVQPPPPPPP 180

Query: 185 QDPAAVAEPKIADE--SPSASKAYSSEEYLKLTEEQLKVQASLAAQSESGSQEQPQGTIG 244
               +   P  A++     + KAY+SE+YLK TEEQLK  +   +Q+E  +Q Q      
Sbjct: 181 PSVPSTEAPVTANDPNDSQSPKAYTSEDYLKFTEEQLKALSPAESQTEDQTQTQEP---P 240

Query: 245 EPATI-TPGPQNLGTGKADESAASAPRPQ 265
           +P T+ TP  ++   G A E+ A++P  Q
Sbjct: 241 QPTTVQTPTGESQPNGTARETTAASPPRQ 259

[Close]

BLAST of Carg22112 vs. TAIR 10
Match: AT5G28750.1 (Bacterial sec-independent translocation protein mttA/Hcf106 )

HSP 1 Score: 53.1 bits (126), Expect = 3.9e-07
Identity = 27/62 (43.55%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 88  SLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLER 147
           +LFG+G PE  VI  VA L+FGPK L E+ +++GKT+++FQ   +E +    E KT  E 
Sbjct: 62  ALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFES---ELKTEPEE 120

Query: 148 EI 150
            +
Sbjct: 122 SV 120

The following BLAST results are available for this feature:

BLAST of Carg22112 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013244.1	2.5e-136	100.00	Sec-independent protein translocase protein TATB, chloroplastic [Cucurbita argyr...	[more]
KAG6574187.1	3.3e-133	99.62	Sec-independent protein translocase protein TATB, chloroplastic, partial [Cucurb...	[more]
XP_022945576.1	1.5e-130	96.68	sec-independent protein translocase protein TATB, chloroplastic-like [Cucurbita ...	[more]
XP_023541969.1	5.9e-130	95.31	sec-independent protein translocase protein TATB, chloroplastic [Cucurbita pepo ...	[more]
XP_022968335.1	1.3e-124	92.42	sec-independent protein translocase protein TATB, chloroplastic [Cucurbita maxim...	[more]

BLAST of Carg22112 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G16	2.0e-48	49.64	Sec-independent protein translocase protein TATB, chloroplastic OS=Pisum sativum...	[more]
Q9XH75	3.3e-43	49.07	Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis t...	[more]
O48950	4.3e-35	49.05	Sec-independent protein translocase protein TATB, chloroplastic OS=Zea mays OX=4...	[more]
Q2R237	2.8e-34	47.46	Sec-independent protein translocase protein TATB, chloroplastic OS=Oryza sativa ...	[more]
Q8DJ44	1.8e-09	54.10	Sec-independent protein translocase protein TatA OS=Thermosynechococcus elongatu...	[more]

BLAST of Carg22112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1A2	7.5e-131	96.68	sec-independent protein translocase protein TATB, chloroplastic-like OS=Cucurbit...	[more]
A0A6J1HWX7	6.1e-125	92.42	sec-independent protein translocase protein TATB, chloroplastic OS=Cucurbita max...	[more]
A0A6J1CJ51	2.4e-97	76.07	sec-independent protein translocase protein TATB, chloroplastic isoform X1 OS=Mo...	[more]
A0A6J1CJQ6	1.2e-96	75.71	sec-independent protein translocase protein TATB, chloroplastic isoform X2 OS=Mo...	[more]
A0A6J1CHV3	9.9e-91	76.63	sec-independent protein translocase protein TATB, chloroplastic isoform X3 OS=Mo...	[more]

BLAST of Carg22112 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52440.1	2.4e-44	49.07	Bacterial sec-independent translocation protein mttA/Hcf106	[more]
AT5G28750.1	3.9e-07	43.55	Bacterial sec-independent translocation protein mttA/Hcf106	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01506	TATBPROTEIN	coord: 109..128 score: 27.48 coord: 89..109 score: 40.46
None	No IPR available	GENE3D	1.20.5.3310		coord: 89..137 e-value: 8.0E-17 score: 62.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..198
None	No IPR available	PANTHER	PTHR33162:SF3	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC	coord: 8..269
None	No IPR available	PANTHER	PTHR33162	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC	coord: 8..269
IPR006312	Sec-independent protein translocase protein TatA/E	TIGRFAM	TIGR01411	TIGR01411	coord: 91..136 e-value: 6.2E-16 score: 55.7
IPR003369	Sec-independent protein translocase protein TatA/B/E	PFAM	PF02416	TatA_B_E	coord: 92..142 e-value: 6.0E-24 score: 83.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22112-RA	Carg22112-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902458	positive regulation of stomatal opening
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0043953	protein transport by the Tat complex
biological_process	GO:1903426	regulation of reactive oxygen species biosynthetic process
biological_process	GO:2000070	regulation of response to water deprivation
biological_process	GO:0009409	response to cold
biological_process	GO:0015031	protein transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity