Carg22102 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg22102
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Actin-depolymerizing factor
Location	Carg_Chr18: 11355989 .. 11356661 (-)
RNA-Seq Expression	Carg22102
Synteny	Carg22102

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGCCCTTTCCTTTATTTTCATCATCATTGTGTTGTTCTTATTTTTGTTACTTAAAAAGGTTGGTTTGATGGACTAATGCTTGTTATATTATGGGGTGAATTAGGCGAACGCGGCATCTGGAATGGCTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTGAAAACAAAGAGGAACTATCGTTTCATTATATTCAAGATTGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTACAGAAACCTACGAAGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTTTTCATAGCATGGTGACGTTAATCTCGTCTTCACACCTTCACATTGGTTTCATAAGAAAATCTCTCATGTCTCTATCAAACCTTAAACTAAGCTTGTCTGCTTGTCCAAATGTCTGTGTTTCTCTGTTTTGAAGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCCTTTTAAGCTCACTTTTCATCTCCATTCTTGAGCCTGC

mRNA sequence

ATGGCGAACGCGGCATCTGGAATGGCTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTGAAAACAAAGAGGAACTATCGTTTCATTATATTCAAGATTGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTACAGAAACCTACGAAGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTTTTCATAGCATGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCCTTTTAAGCTCACTTTTCATCTCCATTCTTGAGCCTGC

Coding sequence (CDS)

ATGGCGAACGCGGCATCTGGAATGGCTGTGAGAGATGAGTGCAAGCTCAAGTTTTTGGAGTTGAAAACAAAGAGGAACTATCGTTTCATTATATTCAAGATTGAGAATCAAGAAGTTGTTGTGGAGAAACTTGGAAGCCCTACAGAAACCTACGAAGATTTCACTGCTGCTATTCCTCCTAACGAGTGTCGTTATGCTGTCTTTGATTTTGACTTCACCACCGACGAGAACTGCCAGAAAAGCAAGATCTTTTTCATAGCATGGTCACCCGACACATCGATCGTGCGAAATAAGATGGTGTATGCAAGCTCCAAGGACAGATTCAAGAGGGAATTGGATGGAATTCAGGTGGAATTGCAAGCCACTGATGCAAGCGAAATGAGCTTCGACATAATCAAAGCTCGAGCCTTTTAA

Protein sequence

MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQATDASEMSFDIIKARAF

Homology

[Close]

BLAST of Carg22102 vs. NCBI nr
Match: KAG6574178.1 (Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013234.1 Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.0 bits (702), Expect = 3.5e-70
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP
Sbjct: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDASEMSFDIIKARAF 138
           ATDASEMSFDIIKARAF
Sbjct: 121 ATDASEMSFDIIKARAF 137

[Close]

BLAST of Carg22102 vs. NCBI nr
Match: XP_022945772.1 (uncharacterized protein LOC111449917 [Cucurbita moschata])

HSP 1 Score: 273.9 bits (699), Expect = 7.7e-70
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETY+DFTAAIPP
Sbjct: 350 MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 409

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 410 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 469

Query: 121 ATDASEMSFDIIKARAF 138
           ATDASEMSFDIIKARAF
Sbjct: 470 ATDASEMSFDIIKARAF 486

[Close]

BLAST of Carg22102 vs. NCBI nr
Match: XP_022967999.1 (uncharacterized protein LOC111467373 [Cucurbita maxima])

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGM VRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETY+DFTAAIPP
Sbjct: 346 MANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 405

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 406 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 465

Query: 121 ATDASEMSFDIIKARAF 138
           ATDASEMSFDIIKARAF
Sbjct: 466 ATDASEMSFDIIKARAF 482

[Close]

BLAST of Carg22102 vs. NCBI nr
Match: XP_023542027.1 (uncharacterized protein LOC111802000 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.8 bits (691), Expect = 6.5e-69
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPT+TY+DF AAIPP
Sbjct: 336 MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTDTYDDFAAAIPP 395

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 396 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 455

Query: 121 ATDASEMSFDIIKARAF 138
           ATDASEMSFDIIKARAF
Sbjct: 456 ATDASEMSFDIIKARAF 472

[Close]

BLAST of Carg22102 vs. NCBI nr
Match: XP_038886312.1 (uncharacterized protein LOC120076526 [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 8.0e-67
Identity = 132/137 (96.35%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MAN+ASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSP ETYEDFTAAIP 
Sbjct: 309 MANSASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPA 368

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 369 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 428

Query: 121 ATDASEMSFDIIKARAF 138
           ATD SEMSFDIIKARAF
Sbjct: 429 ATDPSEMSFDIIKARAF 445

[Close]

BLAST of Carg22102 vs. ExPASy Swiss-Prot
Match: Q67ZM4 (Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 7.3e-63
Identity = 118/136 (86.76%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P ETY+DFTA++P 
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDASEMSFDIIKARA 137
           ATD SEMSFDIIK+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of Carg22102 vs. ExPASy Swiss-Prot
Match: Q8LFH6 (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 5.8e-60
Identity = 115/136 (84.56%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP E Y+DFT  +PP
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDASEMSFDIIKARA 137
           ATD SEMS DIIK+RA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]

BLAST of Carg22102 vs. ExPASy Swiss-Prot
Match: P30175 (Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.2e-59
Identity = 111/139 (79.86%), Postives = 125/139 (89.93%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAI 60
           MAN++SGMAV DECKLKF+ELK KRN+RFI+FKIE   Q+V VE+LG P E+Y+DFT  +
Sbjct: 1   MANSSSGMAVDDECKLKFMELKAKRNFRFIVFKIEEKVQQVTVERLGQPNESYDDFTECL 60

Query: 61  PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 120
           PPNECRYAVFDFDF TDENCQKSKIFFI+WSPDTS VR+KM+YAS+KDRFKRELDGIQVE
Sbjct: 61  PPNECRYAVFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVE 120

Query: 121 LQATDASEMSFDIIKARAF 138
           LQATD SEMS DIIKARAF
Sbjct: 121 LQATDPSEMSMDIIKARAF 139

[Close]

BLAST of Carg22102 vs. ExPASy Swiss-Prot
Match: Q9LQ81 (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.7e-57
Identity = 109/137 (79.56%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAI 60
           MAN+ASGM V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+P ETYEDFT +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 120
           P +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDASEMSFDIIKAR 136
           LQATD SEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of Carg22102 vs. ExPASy Swiss-Prot
Match: Q7XSN9 (Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 PE=2 SV=2)

HSP 1 Score: 220.3 bits (560), Expect = 1.3e-56
Identity = 108/138 (78.26%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIE--NQEVVVEKLGSPTETYEDFTAAI 60
           MAN+ASGMAV DECKLKF ELK+KR++RFI FKI+   Q+VVV++LG P +TY+DFTA++
Sbjct: 1   MANSASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASM 60

Query: 61  PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 120
           P +ECRYAVFDFDF TDENCQKSKIFFI+WSPDTS VR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PASECRYAVFDFDFVTDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDASEMSFDIIKARA 137
           LQATD SEMS DI+KARA
Sbjct: 121 LQATDPSEMSMDIVKARA 138

[Close]

BLAST of Carg22102 vs. ExPASy TrEMBL
Match: A0A6J1G1V2 (uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC111449917 PE=3 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 3.7e-70
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETY+DFTAAIPP
Sbjct: 350 MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 409

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 410 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 469

Query: 121 ATDASEMSFDIIKARAF 138
           ATDASEMSFDIIKARAF
Sbjct: 470 ATDASEMSFDIIKARAF 486

[Close]

BLAST of Carg22102 vs. ExPASy TrEMBL
Match: A0A6J1HYC2 (uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373 PE=3 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGM VRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETY+DFTAAIPP
Sbjct: 346 MANAASGMVVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYDDFTAAIPP 405

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 406 NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 465

Query: 121 ATDASEMSFDIIKARAF 138
           ATDASEMSFDIIKARAF
Sbjct: 466 ATDASEMSFDIIKARAF 482

[Close]

BLAST of Carg22102 vs. ExPASy TrEMBL
Match: A0A0A0LBE8 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182120 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 131/137 (95.62%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSP ETY+DF+AAIP 
Sbjct: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPEETYDDFSAAIPA 60

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDASEMSFDIIKARAF 138
           ATD SEMSFDIIKARAF
Sbjct: 121 ATDPSEMSFDIIKARAF 137

[Close]

BLAST of Carg22102 vs. ExPASy TrEMBL
Match: A0A6J1CI48 (uncharacterized protein LOC111011601 OS=Momordica charantia OX=3673 GN=LOC111011601 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 130/137 (94.89%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MAN+ASGMAVRDECKLKF+ELK KRNYRFIIFKIENQEVVVEKLGSP ETYEDFTAAIPP
Sbjct: 340 MANSASGMAVRDECKLKFMELKAKRNYRFIIFKIENQEVVVEKLGSPEETYEDFTAAIPP 399

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           +ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQ
Sbjct: 400 DECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSRVRNKMVYASSKDRFKRELDGIQVELQ 459

Query: 121 ATDASEMSFDIIKARAF 138
           ATD SEMSFDIIKARAF
Sbjct: 460 ATDPSEMSFDIIKARAF 476

[Close]

BLAST of Carg22102 vs. ExPASy TrEMBL
Match: A0A5A7SR44 (Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001180 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.6e-66
Identity = 130/136 (95.59%), Postives = 131/136 (96.32%), Query Frame = 0


Query: 2   ANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPPN 61
           ANAASGMAVRDECKLKFLELK KRNYRFIIFKIENQEVVVEKLGSP ETY+DFTAAIP N
Sbjct: 277 ANAASGMAVRDECKLKFLELKAKRNYRFIIFKIENQEVVVEKLGSPEETYDDFTAAIPAN 336

Query: 62  ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQA 121
           ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTS VRNKMVYASSKDRFKRELDGIQVELQA
Sbjct: 337 ECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRNKMVYASSKDRFKRELDGIQVELQA 396

Query: 122 TDASEMSFDIIKARAF 138
           TD SEMSFDIIKARAF
Sbjct: 397 TDPSEMSFDIIKARAF 412

[Close]

BLAST of Carg22102 vs. TAIR 10
Match: AT4G25590.1 (actin depolymerizing factor 7 )

HSP 1 Score: 241.1 bits (614), Expect = 5.2e-64
Identity = 118/136 (86.76%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAV DECKLKFLELK+KRNYRFIIF+I+ Q+VVVEKLG+P ETY+DFTA++P 
Sbjct: 1   MANAASGMAVEDECKLKFLELKSKRNYRFIIFRIDGQQVVVEKLGNPDETYDDFTASLPA 60

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAVFDFDF TDENCQKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVFDFDFITDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDASEMSFDIIKARA 137
           ATD SEMSFDIIK+RA
Sbjct: 121 ATDPSEMSFDIIKSRA 136

[Close]

BLAST of Carg22102 vs. TAIR 10
Match: AT5G52360.1 (actin depolymerizing factor 10 )

HSP 1 Score: 231.5 bits (589), Expect = 4.1e-61
Identity = 115/136 (84.56%), Postives = 123/136 (90.44%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAV DECKLKFLELK KRNYRFIIF+I+ Q+VVVEKLGSP E Y+DFT  +PP
Sbjct: 1   MANAASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPP 60

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           NECRYAV+DFDFTT EN QKSKIFFIAWSPD+S VR KMVYASSKDRFKRELDGIQVELQ
Sbjct: 61  NECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDASEMSFDIIKARA 137
           ATD SEMS DIIK+RA
Sbjct: 121 ATDPSEMSLDIIKSRA 136

[Close]

BLAST of Carg22102 vs. TAIR 10
Match: AT1G01750.1 (actin depolymerizing factor 11 )

HSP 1 Score: 222.6 bits (566), Expect = 1.9e-58
Identity = 109/137 (79.56%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAI 60
           MAN+ASGM V DECKLKFLELK KRNYRFI+FKI+   Q+V+++KLG+P ETYEDFT +I
Sbjct: 1   MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSI 60

Query: 61  PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 120
           P +ECRYAV+D+DFTT ENCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRELDGIQVE
Sbjct: 61  PEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVE 120

Query: 121 LQATDASEMSFDIIKAR 136
           LQATD SEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of Carg22102 vs. TAIR 10
Match: AT4G00680.1 (actin depolymerizing factor 8 )

HSP 1 Score: 218.4 bits (555), Expect = 3.6e-57
Identity = 105/137 (76.64%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIEN--QEVVVEKLGSPTETYEDFTAAI 60
           MAN+ASGM V DECK+KFLELK KR YRFI+FKI+   Q+V +EKLG+P ETY+DFT++I
Sbjct: 1   MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSI 60

Query: 61  PPNECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVE 120
           P +ECRYAV+DFDFTT++NCQKSKIFFIAWSPDTS VR+KM+YASSKDRFKRE++GIQVE
Sbjct: 61  PDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVE 120

Query: 121 LQATDASEMSFDIIKAR 136
           LQATD SEMS DIIK R
Sbjct: 121 LQATDPSEMSLDIIKGR 137

[Close]

BLAST of Carg22102 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-54
Identity = 95/135 (70.37%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MANAASGMAVRDECKLKFLELKTKRNYRFIIFKIENQEVVVEKLGSPTETYEDFTAAIPP 60
           MANAASGMAV D+CKLKF+ELK KR +R I++KIE+++V+VEKLG P ++Y+DF A++P 
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQVIVEKLGEPEQSYDDFAASLPA 60

Query: 61  NECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSIVRNKMVYASSKDRFKRELDGIQVELQ 120
           ++CRY ++DFDF T ENCQKSKIFFIAWSPDT+ VR+KM+YASSKDRFKRELDGIQVELQ
Sbjct: 61  DDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQ 120

Query: 121 ATDASEMSFDIIKAR 136
           ATD +EM  D+ K+R
Sbjct: 121 ATDPTEMGLDVFKSR 135

The following BLAST results are available for this feature:

BLAST of Carg22102 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574178.1	3.5e-70	100.00	Actin-depolymerizing factor 7, partial [Cucurbita argyrosperma subsp. sororia] >...	[more]
XP_022945772.1	7.7e-70	99.27	uncharacterized protein LOC111449917 [Cucurbita moschata]	[more]
XP_022967999.1	2.2e-69	98.54	uncharacterized protein LOC111467373 [Cucurbita maxima]	[more]
XP_023542027.1	6.5e-69	97.81	uncharacterized protein LOC111802000 [Cucurbita pepo subsp. pepo]	[more]
XP_038886312.1	8.0e-67	96.35	uncharacterized protein LOC120076526 [Benincasa hispida]	[more]

BLAST of Carg22102 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67ZM4	7.3e-63	86.76	Actin-depolymerizing factor 7 OS=Arabidopsis thaliana OX=3702 GN=ADF7 PE=2 SV=1	[more]
Q8LFH6	5.8e-60	84.56	Actin-depolymerizing factor 12 OS=Arabidopsis thaliana OX=3702 GN=ADF12 PE=2 SV=...	[more]
P30175	2.2e-59	79.86	Actin-depolymerizing factor OS=Lilium longiflorum OX=4690 PE=2 SV=1	[more]
Q9LQ81	2.7e-57	79.56	Actin-depolymerizing factor 10 OS=Arabidopsis thaliana OX=3702 GN=ADF10 PE=2 SV=...	[more]
Q7XSN9	1.3e-56	78.26	Actin-depolymerizing factor 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF6 P...	[more]

BLAST of Carg22102 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1V2	3.7e-70	99.27	uncharacterized protein LOC111449917 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]
A0A6J1HYC2	1.1e-69	98.54	uncharacterized protein LOC111467373 OS=Cucurbita maxima OX=3661 GN=LOC111467373...	[more]
A0A0A0LBE8	1.1e-66	95.62	ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182120 PE=3 ...	[more]
A0A6J1CI48	1.1e-66	94.89	uncharacterized protein LOC111011601 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A5A7SR44	5.6e-66	95.59	Zinc finger CCHC domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Carg22102 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25590.1	5.2e-64	86.76	actin depolymerizing factor 7	[more]
AT5G52360.1	4.1e-61	84.56	actin depolymerizing factor 10	[more]
AT1G01750.1	1.9e-58	79.56	actin depolymerizing factor 11	[more]
AT4G00680.1	3.6e-57	76.64	actin depolymerizing factor 8	[more]
AT3G46000.1	1.3e-54	70.37	actin depolymerizing factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..137 e-value: 2.6E-55 score: 199.7
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..134 e-value: 1.9E-36 score: 124.6
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 5..137 score: 37.030937
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..136 e-value: 1.4E-51 score: 176.5
None	No IPR available	PANTHER	PTHR11913:SF92	COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN	coord: 2..137
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 2..135
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 2..137
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..136 e-value: 5.71237E-63 score: 186.994

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22102-RA	Carg22102-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0003779	actin binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding