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Carg21979 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCACCTTCATCCGTGCCCCCGCCGCCGCGCAGTCACCACTGGCTCTCGCTCCTCTGACGACCCACATCTCCAATTCCCATCGGGAGTCGCTTCCTCCGCCGCCTCCTCCGCCATCGGACCATGTTGCCGGACCAGTGGTGCCGGTTGCAGCGGCCCAATCCGCCGGTGATTCTGCTGTAACTATGGCTTGCCCGCTGGCTAGGGTTCGCCTGTCTGATATTTCCCCATACGACGGCGCGCCTGGGGGGTCCTACGTGAGGGCTGTTGAGGCTTTGTCCGGATCCTTGATGAGATATAATGCAGCTGTGATTGAATTGGAGAATGAAGGTGCTGCTCTCACTCGGTGCGGTCTTGAAGCGGCTAGGTTGTTTCTCAAGAGCCGGGCGCAGAGTGGTGGAAAAGGGCGAGGTGTTTATATGTATAGAGCCGGAAGGTTATTATAGCTTATACTCTCGTTTTTACCATGTTGATTGTTTAGCTCTCATGGAATGCTTTGTGGAACCGGGAAAGTAGATACTTCCTGGGATCTACCTTCTTGGAACTGTTTGTGGAACAAGGAAATTATTCATGCTGATTTATGCAGCTTTACATCAGCTCAAATAGATATGTTAGTCAACTAGTTTACTCTAATTAAAGGGGAAAACCTGAACGAAGTGGCTTGCTGATTGTTAGTTCCATCAGCTGGAAGCTTGACAAATTTAGTTAGTTTAAACAAAGAAAAATCAATTTTGCACCCTCTCCCTTAAATTGTTCCCTTTTCGTTAAAAGTGAATTTGGTAAATTGTTTTGCCAAATATTAATGCTAAGGTTCAAAAGAGAAGCCCTTTATCTCCAACTTGGTGTGTGATGTGCTATGTACAAGCCCTTTTATCCCCAACTTGGTGTGTGATGTGCTATGTACAAGATGAGTCCCAGTTACTTATTCCCATCATGTTCCTTTACCTAGTGTATAGTCCATCAACAGAATTTTTTTTCTTGAATTTATGGTTTGAGAGAAACAATTGTATCTCAAGATTTAGGGGAGTTCAGAATATTTTCATTAAGATAATGCAGAGATCAACGAAGACCTATTTCCAGAAAGAGACAATTAAATGGGCAAGTGAAGATCTAACTTTAAGCGTTATAATAGCATGTTTGTCATAGATTCCAAGTAAATTTGTTTACATTTATAGATATTCTGACTCTAATGTGGTTCAACTAGAAAATAAACCATGGTAGAGTGAGCATGGATATTGTGAGATTTTTTTTTCTTTCAAATTTTAACTTTTAATAAGAAACTAATCTTCTAATAAGAAAGTGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGATAAAGTACAAAAGGGAATCCAGATGCAACCAAAGTAGGTATTGTTGTGTAGTTGACGTGAGCATATTGTCATGAGGTGAGTACTGGCAAACCTGTGGTGCCTAGGATGCTTTCTTAGTACGACGATCCTTAGTCAAACTTTGAGAATCGAAGAATAGTGCTTTTACTGTAACAAGGATGTATATAAGGGGGAGGCCCTAGGAGAGCTTCTTCGTTGTTCTGCTTTGTTACTTTTTGTGTTGCTTGTGCTGCAAGTTATGTGATGGAGGCCTCACGCTTTTGTGATGGATAAGTCAGTTATTCTTATGTATGCTAAATTATAATTTTGAGCTATTTTTATTGCAGAGCTGTGGAAGATTGGGAGTCTTGTCCTCCATGTATGGCTGATATTTTTAGATGTATGGGTAAAGCAGCTCGGGCTGCTTTATGTGCAATAGCCAGGCATCTTCGTTTGAGAAGCGAGTAAGAATGTTGTGAATATTCAGTTTTTCTTTTGGTTAACTATGTTGAACTTATGTACCATGCAAATAAATACTCTGCAGTGTTTTCAATAATTTGCTTGATGATTCTCCACTTCCTGCTACTGAGGTATCCTCATCAGTGCTTGTTGCAATGCACCTGCATAATAGCTCTTTGCACAACTGCAAGGGTTATGGTGGGGGAGGAAAGTCAGCAATGAATGTTGAAGTTGAGAAGGGTTTATTGACATTGATTTCCTCAGACAATCCTGGTTTACAGGTGTACTTCAATGACTTTGATAACTGATCTCATTTAGATATTGATAGTTCATAGTAGTTCCAACACTGAAAACTTAGTGCATTAAAGTTTTATGGTATTGTCTGGAACTTTTGTAATGACCTATACGGGTAACTTTTCTCATTGGTAGGTTTGTGATCCCAATGGTCGCTGGTACCTAGCAGATGCTGTGTTGGCTCCTGGGGATCTGTTACTGCTTACTGGCAAGGCACTCAGCCATGCTACAGCTGGCCTTCGTCCTGCTGCATCATATAAAGCTGCTCCTGATCATTCCTTGGGATCAAATTGTGGTGGGAGGTATGTAACTTTATATAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTGTGGTATATCTATGCTGTATGAGCATACCCTTTTAATTGTTGCTTGGATTGAATTACTTTATTCAGCATTGTGGTTGTAGGACTTCCCTTGCATTTAGACTCATGCCACAAACCAATGCCATATTAGACTGTTCTCCCATTGCAGCAGCTGGTCATGTTATTCCTCAAAGATATGGTCCAGTCTCTGTTAGCCAATTCATGGATGTTCTTTCCGCTGAGGAAGATGTATTATGTACTCATCTGGATAAGGACAACAATTGTGTAAGTCTTATAATCTGATTTTTTATAGAAACCCTGTTCAACTTTGGATTTCTTGTCATGACAATCCATGGTTAAGATTCATAGTATGAAAAACTTCGGTGCATATTTTAACACTGTTTTGCTTCTTTTTTCTTTACTGATATTTAATTCACTTAGTTGATTCTTTTCTCCATGTGGTTTTTGTTTTGTGCTTGCTGGTGCTTTAGTCAGGTTCAGTTTTTTCTTCATAAGTTCATATAAGTTGGAAATCTAAGTGATTCGCACCTTAAAGCTATCAACATTTACACTTAAGTATATTCTAATTTTGGATCCTATCCAAATATCCTTCAATATTTTTTTAGTAATCCTACTGCGAGATGATGTAGAATTCACTAGCAAGAGTCAAACAGGAGAACGAATAGTGGTTGAATTATGGTATTTTTAAGAATTAATTTCCATTATATTAGCTAAATATATTGATTAATATGATATTTTAAAAAATTAATTTCAATTTTTTACCACGATGTTCGAGCCTAGTGAAGCCCACATACTTAGTGGCACTTTATTATTGAATTTTATATTTTGCATTATGACAGCATTTACATTTTATTAATATATTCTTCTTAATGTACAGATAGCTCGAAATGATCAAAATAAGGAGGCCTCATTAAGAAGTGTTCTCTCGGATCCGTTATCGTGAGTGACTTTCAATGGTGCTTACTATTGCTTTTCTTTTGAGTTTTTTTGTAATCTGTTCTGAAATTCAAAATTTGATCAAACCTTTCAAGCCTCCATTGGTTAGTGATGTCTGTGGAAATAAAATATCTATTGCTTTGTGCTATCACTATCATATGCCCTACAACATTTGATCGTTCAGTACTCTTTTCAGATATCAACCCAAAATTTGGGTGAGTTAGGGAAGGATCTGGACTCTTCAACTAGGAATTCTTCTTAACATAAATTTTTGTAGTAGTTTCAACGGGAGAAATTTTGTACTGTAAAAAAGTTTTATCATAAGGATGTTTCTTGCAACAATATATTTAGAAAAATTTATTGCAGTGCTTATTTTTGACCATATGATCACTGTTTTCAATCATCCCTTGATACTGTGGAAAGTTTTTGATGTGGAGCCTGTACTAGAGAAATTACTCTTGGACTTCTGTTTGTACCAATTGGAAGGTCATTACAGACCTCCTAACCTATTCTCGTTTTTGTATATTTGATATAGTTCATTAAAGTTGTTTCTAATATACAAAAATGTATGTTTCGTGGACTGGGATATTGTTTTAACTTAATACCTACCCTTCACTTGTGAATATTGTTGTTATTAGTATTATTTATTACTTAAGATGACCGGGGGGGGGGGGGGGTAGAAAACTAGACTTTTTTTTTCCTTTCTAAAGATTGAAGATCACAATAAAGTATAGTATAGAGGATTCTTCCCAATCAACCAAATGTAGATTACCCCCAAAAGGGGAGAGAGAAATCTTGGTACATAATTTGTATATATTTTATTGTTTTTTATTGAGAAAAAGAAAGTTGAGATCTCACATAGGAAAAAAAAAAAAAAACATGGTGATACCACTTGAAAAAAATATCAGATCTAACTTTCGCATCCACTTTGTCTCTAATTTATTGTTTTTATATTGTAACTATCTGTGTGGAAGTTAGGACTTCTCGTTGTGGCTACTTTCATATAATCAAATTCAGAATTATGTGAAGTTGTGCTTGGTTCCATATAAATTTCGTATTGACCAATGTTGGGAGAACTTCATGTTTTGATGTTTCTCCATTTTCTCTTTTTCTCTACTCCCAGTGGTGCATTCCTTGAGGATGCAATGTTTGTTTCGTGTGGACATTCATTTGGTGGTCTTATGCTGAGGAGGGTCATTGAGACGGTACGGGCATTCTTCTCCTAATTTATCCTCTTTTCTTATGGTATTTCTGCTATTGTTTATATCTTCGGGATATGTGTTTGATCTTTCTCACTTTCCACATAGATTTAAAAAGCATGCCTTATCAATATTTATTCCCTTTGCTACTGTGAGTTAAATGA GTCACCTTCATCCGTGCCCCCGCCGCCGCGCAGTCACCACTGGCTCTCGCTCCTCTGACGACCCACATCTCCAATTCCCATCGGGAGTCGCTTCCTCCGCCGCCTCCTCCGCCATCGGACCATGTTGCCGGACCAGTGGTGCCGGTTGCAGCGGCCCAATCCGCCGGTGATTCTGCTGTAACTATGGCTTGCCCGCTGGCTAGGGTTCGCCTGTCTGATATTTCCCCATACGACGGCGCGCCTGGGGGGTCCTACGTGAGGGCTGTTGAGGCTTTGTCCGGATCCTTGATGAGATATAATGCAGCTGTGATTGAATTGGAGAATGAAGGTGCTGCTCTCACTCGGTGCGGTCTTGAAGCGGCTAGGTTGTTTCTCAAGAGCCGGGCGCAGAGTGGTGGAAAAGGGCGAGGTGTTTATATGTATAGAGCCGGAAGAGCTGTGGAAGATTGGGAGTCTTGTCCTCCATGTATGGCTGATATTTTTAGATGTATGGGTAAAGCAGCTCGGGCTGCTTTATGTGCAATAGCCAGGCATCTTCGTTTGAGAAGCGATGTTTTCAATAATTTGCTTGATGATTCTCCACTTCCTGCTACTGAGGTATCCTCATCAGTGCTTGTTGCAATGCACCTGCATAATAGCTCTTTGCACAACTGCAAGGGTTATGGTGGGGGAGGAAAGTCAGCAATGAATGTTGAAGTTGAGAAGGGTTTATTGACATTGATTTCCTCAGACAATCCTGGTTTACAGGTTTGTGATCCCAATGGTCGCTGGTACCTAGCAGATGCTGTGTTGGCTCCTGGGGATCTGTTACTGCTTACTGGCAAGGCACTCAGCCATGCTACAGCTGGCCTTCGTCCTGCTGCATCATATAAAGCTGCTCCTGATCATTCCTTGGGATCAAATTGTGGTGGGAGGACTTCCCTTGCATTTAGACTCATGCCACAAACCAATGCCATATTAGACTGTTCTCCCATTGCAGCAGCTGGTCATGTTATTCCTCAAAGATATGGTCCAGTCTCTGTTAGCCAATTCATGGATGTTCTTTCCGCTGAGGAAGATGTATTATGTACTCATCTGGATAAGGACAACAATTGTATAGCTCGAAATGATCAAAATAAGGAGGCCTCATTAAGAAGTGTTCTCTCGGATCCGTTATCTGGTGCATTCCTTGAGGATGCAATGTTTGTTTCGTGTGGACATTCATTTGGTGGTCTTATGCTGAGGAGGGTCATTGAGACGGTACGGGCATTCTTCTCCTAATTTATCCTCTTTTCTTATGGTATTTCTGCTATTGTTTATATCTTCGGGATATGTGTTTGATCTTTCTCACTTTCCACATAGATTTAAAAAGCATGCCTTATCAATATTTATTCCCTTTGCTACTGTGAGTTAAATGA GTCACCTTCATCCGTGCCCCCGCCGCCGCGCAGTCACCACTGGCTCTCGCTCCTCTGACGACCCACATCTCCAATTCCCATCGGGAGTCGCTTCCTCCGCCGCCTCCTCCGCCATCGGACCATGTTGCCGGACCAGTGGTGCCGGTTGCAGCGGCCCAATCCGCCGGTGATTCTGCTGTAACTATGGCTTGCCCGCTGGCTAGGGTTCGCCTGTCTGATATTTCCCCATACGACGGCGCGCCTGGGGGGTCCTACGTGAGGGCTGTTGAGGCTTTGTCCGGATCCTTGATGAGATATAATGCAGCTGTGATTGAATTGGAGAATGAAGGTGCTGCTCTCACTCGGTGCGGTCTTGAAGCGGCTAGGTTGTTTCTCAAGAGCCGGGCGCAGAGTGGTGGAAAAGGGCGAGGTGTTTATATGTATAGAGCCGGAAGAGCTGTGGAAGATTGGGAGTCTTGTCCTCCATGTATGGCTGATATTTTTAGATGTATGGGTAAAGCAGCTCGGGCTGCTTTATGTGCAATAGCCAGGCATCTTCGTTTGAGAAGCGATGTTTTCAATAATTTGCTTGATGATTCTCCACTTCCTGCTACTGAGGTATCCTCATCAGTGCTTGTTGCAATGCACCTGCATAATAGCTCTTTGCACAACTGCAAGGGTTATGGTGGGGGAGGAAAGTCAGCAATGAATGTTGAAGTTGAGAAGGGTTTATTGACATTGATTTCCTCAGACAATCCTGGTTTACAGGTTTGTGATCCCAATGGTCGCTGGTACCTAGCAGATGCTGTGTTGGCTCCTGGGGATCTGTTACTGCTTACTGGCAAGGCACTCAGCCATGCTACAGCTGGCCTTCGTCCTGCTGCATCATATAAAGCTGCTCCTGATCATTCCTTGGGATCAAATTGTGGTGGGAGGACTTCCCTTGCATTTAGACTCATGCCACAAACCAATGCCATATTAGACTGTTCTCCCATTGCAGCAGCTGGTCATGTTATTCCTCAAAGATATGGTCCAGTCTCTGTTAGCCAATTCATGGATGTTCTTTCCGCTGAGGAAGATGTATTATGTACTCATCTGGATAAGGACAACAATTGTATAGCTCGAAATGATCAAAATAAGGAGGCCTCATTAAGAAGTGTTCTCTCGGATCCGTTATCTGGTGCATTCCTTGAGGATGCAATGTTTGTTTCGTGTGGACATTCATTTGGTGGTCTTATGCTGAGGAGGGTCATTGAGACGGTACGGGCATTCTTCTCCTAA VTFIRAPAAAQSPLALAPLTTHISNSHRESLPPPPPPPSDHVAGPVVPVAAAQSAGDSAVTMACPLARVRLSDISPYDGAPGGSYVRAVEALSGSLMRYNAAVIELENEGAALTRCGLEAARLFLKSRAQSGGKGRGVYMYRAGRAVEDWESCPPCMADIFRCMGKAARAALCAIARHLRLRSDVFNNLLDDSPLPATEVSSSVLVAMHLHNSSLHNCKGYGGGGKSAMNVEVEKGLLTLISSDNPGLQVCDPNGRWYLADAVLAPGDLLLLTGKALSHATAGLRPAASYKAAPDHSLGSNCGGRTSLAFRLMPQTNAILDCSPIAAAGHVIPQRYGPVSVSQFMDVLSAEEDVLCTHLDKDNNCIARNDQNKEASLRSVLSDPLSGAFLEDAMFVSCGHSFGGLMLRRVIETVRAFFS Homology
BLAST of Carg21979 vs. NCBI nr
Match: KAG7030555.1 (hypothetical protein SDJN02_04592, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 829.3 bits (2141), Expect = 1.5e-236 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
BLAST of Carg21979 vs. NCBI nr
Match: XP_022942565.1 (uncharacterized protein LOC111447566 [Cucurbita moschata]) HSP 1 Score: 809.3 bits (2089), Expect = 1.6e-230 Identity = 408/409 (99.76%), Postives = 408/409 (99.76%), Query Frame = 0
BLAST of Carg21979 vs. NCBI nr
Match: KAG6599871.1 (U-box domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 807.4 bits (2084), Expect = 5.9e-230 Identity = 408/410 (99.51%), Postives = 408/410 (99.51%), Query Frame = 0
BLAST of Carg21979 vs. NCBI nr
Match: XP_023511739.1 (uncharacterized protein LOC111776223 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 805.8 bits (2080), Expect = 1.7e-229 Identity = 407/410 (99.27%), Postives = 407/410 (99.27%), Query Frame = 0
BLAST of Carg21979 vs. NCBI nr
Match: XP_022990573.1 (uncharacterized protein LOC111487410 [Cucurbita maxima]) HSP 1 Score: 802.0 bits (2070), Expect = 2.5e-228 Identity = 405/410 (98.78%), Postives = 406/410 (99.02%), Query Frame = 0
BLAST of Carg21979 vs. ExPASy TrEMBL
Match: A0A6J1FWI9 (uncharacterized protein LOC111447566 OS=Cucurbita moschata OX=3662 GN=LOC111447566 PE=4 SV=1) HSP 1 Score: 809.3 bits (2089), Expect = 7.6e-231 Identity = 408/409 (99.76%), Postives = 408/409 (99.76%), Query Frame = 0
BLAST of Carg21979 vs. ExPASy TrEMBL
Match: A0A6J1JTN9 (uncharacterized protein LOC111487410 OS=Cucurbita maxima OX=3661 GN=LOC111487410 PE=4 SV=1) HSP 1 Score: 802.0 bits (2070), Expect = 1.2e-228 Identity = 405/410 (98.78%), Postives = 406/410 (99.02%), Query Frame = 0
BLAST of Carg21979 vs. ExPASy TrEMBL
Match: A0A1S3C3S2 (uncharacterized protein LOC103496673 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496673 PE=4 SV=1) HSP 1 Score: 712.6 bits (1838), Expect = 9.6e-202 Identity = 366/409 (89.49%), Postives = 375/409 (91.69%), Query Frame = 0
BLAST of Carg21979 vs. ExPASy TrEMBL
Match: A0A6J1DMB0 (uncharacterized protein LOC111022323 OS=Momordica charantia OX=3673 GN=LOC111022323 PE=4 SV=1) HSP 1 Score: 604.4 bits (1557), Expect = 3.7e-169 Identity = 298/319 (93.42%), Postives = 307/319 (96.24%), Query Frame = 0
BLAST of Carg21979 vs. ExPASy TrEMBL
Match: A0A5B6YSY4 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_004200 PE=4 SV=1) HSP 1 Score: 576.2 bits (1484), Expect = 1.1e-160 Identity = 313/425 (73.65%), Postives = 348/425 (81.88%), Query Frame = 0
BLAST of Carg21979 vs. TAIR 10
Match: AT3G19895.1 (RING/U-box superfamily protein ) HSP 1 Score: 459.1 bits (1180), Expect = 3.7e-129 Identity = 252/381 (66.14%), Postives = 292/381 (76.64%), Query Frame = 0
BLAST of Carg21979 vs. TAIR 10
Match: AT3G12940.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 152.1 bits (383), Expect = 9.6e-37 Identity = 111/315 (35.24%), Postives = 155/315 (49.21%), Query Frame = 0
BLAST of Carg21979 vs. TAIR 10
Match: AT5G05230.1 (RING/U-box superfamily protein ) HSP 1 Score: 45.1 bits (105), Expect = 1.7e-04 Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = 0
BLAST of Carg21979 vs. TAIR 10
Match: AT2G40640.1 (RING/U-box superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 4.8e-04 Identity = 18/35 (51.43%), Postives = 26/35 (74.29%), Query Frame = 0
BLAST of Carg21979 vs. TAIR 10
Match: AT2G40640.2 (RING/U-box superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 4.8e-04 Identity = 18/35 (51.43%), Postives = 26/35 (74.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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