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Carg21976 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTATGAGAGAGGGATACATGGAGAAGCAGCAGTCGCCTCGCCATAAAGGATTTCATTCGATTGTTGTTGCAAATTGGGATATCGCTTTCGGTAATTCTCTCTCCAAAACCTGTAATCCCCAATTGACTCTCCTTAATATTATAGGAATATTTAGAATCATTTCTCAAACAGCACAGTTGAACATTGTTTTATATATGTCACACAAATCGTTGTATCTTTGTGTATATGTTGAAGGTATATTTTTATGGTCAAGGGCATTCCATCCGATTACTGCCATTGAAACGAGAGACGGAGAATTGGATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGCGGCGTCTCACTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCATTTGATCATGCCTTTTGTTTCGATTAGAGGTATGACCACCCATTCCTCCATTTTCTCCATTTTTTCCTTTTTTGTAATGTTTATGCCTAATTTTGATTAGAGTTCAATATTTGTGACAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGGTTATTCTTTTTCCTCCTTATGTGTTTAAGGCTTAAATGGGTGTTGTCTCTTTTTGCGTAAACCCCAAAATTTGAAGAATGAACATAGGGAGTAAGACGGCCATAAATTAGAAGGCTGAGTCTTTCTTTGTCATTGAAATCGTCTATATGGTTACCTTTAGTTTCAGAGAGTCTGACGGCCATGTTACTGGAGTACTTTATAATCAGCCCAGTCTGGTATGGGCCTTCGCAGGTTGGTTCTTGTGATCCACGGTTTAATTTCTGTGTGTTTAGCATGACCCGTGGAAGGACTAAATCTTGGAATTTCAACGACTTACCTAGACCTGAATACATAAAAAGTTCAAAATCTTGCTTCATAGTTTGTAACAGTGATTGGTTCTTCCTAAAAACATGATTACCTTTTCAAAAATACTTGCAATAATACTGGGTTGGTTGAATGCCATTAAAACCGTTTCTTTTGAATATTTGGATAGAAAGGAATAAAAGAAATTCTCAAGATTGATACAAAAATCATAGTGAAATTTGGGATTCATTCTATCTTGTTTTTTTTTATTCACTTGGGAGTGTTCTTTTCTTTCTTGTTCTGGCAATCTCATTTGTGATTAATGTCTATATATTTTTCAATGAAATATCTTTCTTTTCGCTCTCTTTTGTGAACTATATAGAATACTTCATTTGATTTACTTTTCATTTTTAAAAAAAGTGTAGTAGAATCTGTATTTTTCTTCTAACATTCTGTCGTAGTTCAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGTATGTGGACCAATTTTTCCTGGGAAAGTCAGATGTCATTTGTTGCTATCCCTTCGACAACCTATTCTTTCATTTCAATTGTAGTTTTATATCCTTTTTATTCTCTCTCGGACTTCTTTTCTGTTTTTCTTTCTGACAAGGGGGAGGGTGGTTCAATTCCTATAGTACCTTCTCCCTGAAATTCATTTGGTATTTCTTCTCCATCATTACAGTACTCTAGCTGATGGTTGTCTTCGTGTATTTGGCAAAAGGCAGTGTGTTACTTGAATAGTTATGGAGTAGATTTCGAAGGTGGGCTGTTTCACTTTCAGGACGGGGAACCAAAAACTATCTCGCCTCTTTGTGGAGTAAGTTGATTGATAAAAGCTTTTGACCTCTTCCATTTATTTTACTCGGTACATACAGCACTTTTTCTTATAAAAAAAATTGTACATTTCTATGTTTGTCAACATGATTGTAGCTCAATTGGTTAAGACATTAAAAGGCGGAGGTCCAAATCTCATCCTCACATATTGTAGAACTCGAAAATGGTACATATGCTTCTTTGAAGGATGTGCTTGTGCTCTTTTGAGCGAAGCAATCTTCAGTATTTTTTGGTCAATAGAAATAATAAGTGGAATTTAATCCTCGGCAGTATGAATTATAGCCCATGTTTCATTGCTGTTCTTATAGTTCACTTTCTAATTATTTTAGTAATTATGCCTTCTTTGTAAATTATAATTAATTCTAATTGTGGGGATATTCTATAAGAACGTTTGACTTTGATGTAAATGGAGACGAGTCATGCAGAAAAGGGCATCTTCTCTGAATTGTTGGATTTCGGTGATAGGTTTTTAGTTCATTTATCTATATCAATGAAAAGTTGTTTTTCCTCTTACAAGAAATGCCATATTAGTCTGAATAATTGAAGGTGGTGGATTATATTTGTTAGTAGTTTGAAACAATGTACCAATCAAGTATAGTTAATACATGTTTCGCTTTATCAGGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTATGTCCAAACACTCTGGCCCTCTGAATCTGCATGTGAAATCATTGTTTAAATGAATAACATCAAATCTCTCCCATGGTTCTTTGAGGAATAATCTAACTTTCATTGAGAAGAAATGAAACAATACAAGTTATATAAAATTAAAGCCTACAAATGGGAAAAAAGGGTAATTCAGAAAAAGCCTCGTCATCGAAGCCGATAGAGAGCACATTAATTCTTTCTTGCTGTTTTTCTTTTACTGTAACTGAGGGATCGTGCATGTTGATTAATCCTCAAGAGAGTCGCTAGTAGCCCTCTCGTAGACAGCTGTACCTCATCTTGCTTACCACGTGGTTTCCTCGGATAGGTAACTAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGACAGTTCCCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGTGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTATTCCGTCGAAATCACCCTCAACATTAGTCCCCCTTGTGATTATATAGCAGAATCTAGTCGTTTTTCACGTAACGAGAAAAAAAAAGTTGTCATATTCAGAATCGTCAAATACTATGATTAATTCACTTCGTTTTATGTAGTTTCCTCATTGAAAAAGTCTGCTAAAACGAGTTACCTACACCTGCTTAAACAGGTAGTGCTATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTAACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTATTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGCAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGACTCTTCCACTTCTGGGATAGTGGCAGTCTCAAATGCTAAAAGTAGCTGAGCTTCAAGGTTAGTTATGGGCCTTTGTACAGCTTAACTAGATTTTACTTGTCCCAAGTGTGCAATCCTTTGTGTTATATTCTTACCCTTTTCAACGATTTAGCCATTTTTCACAGTTTTTAAAGGGGTATCATTTCTGTTTCTAGAAAACTTGGTTCTCGTTTTAGTTTCTTAGTATCCTTCTCA GTTTATGAGAGAGGGATACATGGAGAAGCAGCAGTCGCCTCGCCATAAAGGATTTCATTCGATTGTTGTTGCAAATTGGGATATCGCTTTCGGTATATTTTTATGGTCAAGGGCATTCCATCCGATTACTGCCATTGAAACGAGAGACGGAGAATTGGATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGCGGCGTCTCACTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCATTTGATCATGCCTTTTGTTTCGATTAGAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGGTTATTCTTTTTCCTCCTTATGTGTTTAAGGCTTAAATGGGTGTTGTCTCTTTTTGCTTTCAGAGAGTCTGACGGCCATGTTACTGGAGTACTTTATAATCAGCCCAGTCTGTTCAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTAACTAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGACAGTTCCCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGTGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTAGTGCTATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTAACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTATTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGCAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGACTCTTCCACTTCTGGGATAGTGGCAGTCTCAAATGCTAAAAGTAGCTGAGCTTCAAGGTTAGTTATGGGCCTTTGTACAGCTTAACTAGATTTTACTTGTCCCAAGTGTGCAATCCTTTGTGTTATATTCTTACCCTTTTCAACGATTTAGCCATTTTTCACAGTTTTTAAAGGGGTATCATTTCTGTTTCTAGAAAACTTGGTTCTCGTTTTAGTTTCTTAGTATCCTTCTCA ATGAAAATGGGAGACGAAGCGGAGATCAATCAGCGGCGGCGTCTCACTCTGGAAAATTTCTTAACCCTCGAAGAATGCAGGGAACTGGAGTTCATCCATAAGAGCTGCTGTACGGTGGGTTATAGACCATACGTCTTCTCCACCACTCTTTTGCATCTTGTTGTCTCTAATTCTGCTCATTTGATCATGCCTTTTGTTTCGATTAGAGAGCGGTTGAAGGAGAAAGCGGAGGAGTTCTTTGGCTGTGAATATGAGCTCTTCGTCGAGTTCACTGGCTTGATAAGGTTATTCTTTTTCCTCCTTATGTGTTTAAGGCTTAAATGGGTGTTGTCTCTTTTTGCTTTCAGAGAGTCTGACGGCCATGTTACTGGAGTACTTTATAATCAGCCCAGTCTGTTCAGCTGGACCAGGGGAGCAAGGATTGGATGGCATAGTGACGACAACCGGCCCTATCTAAAACAACGTGAATTTACAGATTGTGTGATGTACACGGCTGACAGCCTCAATGTTCATTCTGTTGATGAGGTAACTAGTGGAGAAAGACTTACGCTGACATTATGGTTCACCCGTGACAGTTCCCATGATGAAGATGCAAAACTTCTTTCCCTTCTTTCACAAAGCCATTTACACGATCGTCTTCCTGACTCATGCCTACCTCAGCCTCCATCCTGTAATATGTATTGGTTTTCACCAAAAGACGATCCAAATTTCAAGTTCGGTTTTGATATATGTTGGGCAAGACTGCATGCGCTAGGATACGGCATTTATTTTCCTCAGGACCATAGTTTGTCAGAGTATCCAGATTTATTCTCACAGGATGTACAATTAGTACGTGGTAATAAGATCTTCTCTCAGAAGTTTGATAGCATTTTGCATGCACTTCAGGTAGTGCTATTTCTATATTGGAAAGGCAAAGAATTGGATTCTACTAACTCCAAGGAAGATTCAAGCTATGCAGAAGGTTTATCTCCAAAGAGAAATGTGGGAGTCGATTATTTTAAATCCGAGTTCTCAAAGGACGATGCACTGGCGGAGTCAGTCTTCTTGTATGCTAGTTCTGATGTCAAGGAGAAGCAACACCGGTTGGGGTGGGCTAAGCTTGCTGCAGTAGCAGCAGCTTGGGAAGATTATGCTTCCAATTTAAGGAGAGAACTCCTTCGGAGCTTCGCCCATTGGAGAACCAGTCAATCCATATACAGTGTTCCATATGGTAGTTGA MKMGDEAEINQRRRLTLENFLTLEECRELEFIHKSCCTVGYRPYVFSTTLLHLVVSNSAHLIMPFVSIRERLKEKAEEFFGCEYELFVEFTGLIRLFFFLLMCLRLKWVLSLFAFRESDGHVTGVLYNQPSLFSWTRGARIGWHSDDNRPYLKQREFTDCVMYTADSLNVHSVDEVTSGERLTLTLWFTRDSSHDEDAKLLSLLSQSHLHDRLPDSCLPQPPSCNMYWFSPKDDPNFKFGFDICWARLHALGYGIYFPQDHSLSEYPDLFSQDVQLVRGNKIFSQKFDSILHALQVVLFLYWKGKELDSTNSKEDSSYAEGLSPKRNVGVDYFKSEFSKDDALAESVFLYASSDVKEKQHRLGWAKLAAVAAAWEDYASNLRRELLRSFAHWRTSQSIYSVPYGS Homology
BLAST of Carg21976 vs. NCBI nr
Match: KAG7030552.1 (hypothetical protein SDJN02_04589 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 833.9 bits (2153), Expect = 5.7e-238 Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0
BLAST of Carg21976 vs. NCBI nr
Match: XP_022942569.1 (prolyl 3-hydroxylase 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 714.9 bits (1844), Expect = 3.9e-202 Identity = 363/437 (83.07%), Postives = 364/437 (83.30%), Query Frame = 0
BLAST of Carg21976 vs. NCBI nr
Match: XP_023552239.1 (prolyl 3-hydroxylase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 712.6 bits (1838), Expect = 1.9e-201 Identity = 362/437 (82.84%), Postives = 363/437 (83.07%), Query Frame = 0
BLAST of Carg21976 vs. NCBI nr
Match: XP_022989994.1 (prolyl 3-hydroxylase 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 704.5 bits (1817), Expect = 5.2e-199 Identity = 359/437 (82.15%), Postives = 361/437 (82.61%), Query Frame = 0
BLAST of Carg21976 vs. NCBI nr
Match: KAG6599868.1 (Prolyl 3-hydroxylase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 597.0 bits (1538), Expect = 1.2e-166 Identity = 304/375 (81.07%), Postives = 304/375 (81.07%), Query Frame = 0
BLAST of Carg21976 vs. ExPASy TrEMBL
Match: A0A6J1FRP8 (Procollagen-proline 3-dioxygenase OS=Cucurbita moschata OX=3662 GN=LOC111447569 PE=3 SV=1) HSP 1 Score: 714.9 bits (1844), Expect = 1.9e-202 Identity = 363/437 (83.07%), Postives = 364/437 (83.30%), Query Frame = 0
BLAST of Carg21976 vs. ExPASy TrEMBL
Match: A0A6J1JQV6 (Procollagen-proline 3-dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111487019 PE=3 SV=1) HSP 1 Score: 704.5 bits (1817), Expect = 2.5e-199 Identity = 359/437 (82.15%), Postives = 361/437 (82.61%), Query Frame = 0
BLAST of Carg21976 vs. ExPASy TrEMBL
Match: A0A1S3C4U3 (uncharacterized protein LOC103496668 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496668 PE=4 SV=1) HSP 1 Score: 589.7 bits (1519), Expect = 9.1e-165 Identity = 300/404 (74.26%), Postives = 317/404 (78.47%), Query Frame = 0
BLAST of Carg21976 vs. ExPASy TrEMBL
Match: A0A0A0KMN7 (Procollagen-proline 3-dioxygenase OS=Cucumis sativus OX=3659 GN=Csa_5G289640 PE=3 SV=1) HSP 1 Score: 582.8 bits (1501), Expect = 1.1e-162 Identity = 303/435 (69.66%), Postives = 319/435 (73.33%), Query Frame = 0
BLAST of Carg21976 vs. ExPASy TrEMBL
Match: A0A5D3CRE9 (Procollagen-proline 3-dioxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold186G001030 PE=3 SV=1) HSP 1 Score: 575.5 bits (1482), Expect = 1.8e-160 Identity = 301/436 (69.04%), Postives = 317/436 (72.71%), Query Frame = 0
BLAST of Carg21976 vs. TAIR 10
Match: AT1G68080.3 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 341.3 bits (874), Expect = 1.1e-93 Identity = 192/404 (47.52%), Postives = 242/404 (59.90%), Query Frame = 0
BLAST of Carg21976 vs. TAIR 10
Match: AT1G68080.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 333.6 bits (854), Expect = 2.3e-91 Identity = 192/424 (45.28%), Postives = 242/424 (57.08%), Query Frame = 0
BLAST of Carg21976 vs. TAIR 10
Match: AT1G68080.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 302.0 bits (772), Expect = 7.3e-82 Identity = 177/403 (43.92%), Postives = 225/403 (55.83%), Query Frame = 0
BLAST of Carg21976 vs. TAIR 10
Match: AT1G68080.4 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 199.5 bits (506), Expect = 5.1e-51 Identity = 111/244 (45.49%), Postives = 151/244 (61.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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