Carg21934 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21934
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Growth-regulating factor
Location	Carg_Chr11: 3289920 .. 3291058 (-)
RNA-Seq Expression	Carg21934
Synteny	Carg21934

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGTGCACCAGAAGTATGTTTCCTTTCACCTCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTCAAATACATGGTTTCCGGCATTCCTATACCTCCTGATCTCCTCTTCAGTATTAAAAGAAGTACCTTGGACTCTCCTTTCACTTCTAAGCTTTTCCCCCACCATCCTCAACATGGTAAATAAATATCTCTCTATCTCCCTCTCCCATTCTCTCTCTTTATCTCTCAGAAATGTTTCTGTTTCATGCAGTAGGGTGGAACTATTTGCAAATGAGTTTAGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGAAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTATCCAGATTCCAAGTACTGCGAGAGGCACATGCATAGAGGCAAAAATCGTTCAAGAAAGCCTGTGGATGTTTTGAAAACGACAGCAACAAATGATATTAACCGCCTTTCAAATCCAGCGTTTTCTTCCCTAACCAACAATTCATCCCTACTCTCCTATCGGCCCTTCCCCGCTCATCAAATATCTTCAACTTCTAATGGGAATGGCATATCACCCCAAGACACTAATACCCTCTTGCTTCTGGAATCTGGTTCTTACTCGGACAGAAACCCAGATTACAGGTTTGTAGATTATTCTACTCTCTTTGGAGTTGGAGATTAATATTAAGTATTGAGATTCTGACTTTTGTCCATCTTCTGTTATTAACAAGAAGAAGTAGGGACACTTATGGGCTAAAAGAGAAAGTAGATGAGTATGCCTTCTTCTCGCAAGAACCATCTGAAACTGCTGCAAGAGCCGATTCTCTGCAACTGACACCACTAACGATGAGTTGTTCTTCTCTATATCCAAAACAGAACAACTGCTCTTCTTTGCAGAATGATCAGTCCTGCTATCAGCTTCATCAGAGCCTCGCAGACCCTTTGAAGCAACAAAAGAGAGATGAATCACAGAAGACAGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAGAGAGGATCACGGCTTGATTTCGAAGATAAATCATCAAATACTGGCTCAGTTCCCACCATTCGGCCCTCAACTTCCATTCCCACCACTTCCAATGACTTCCCCATTTTCGGATTCAACAACCCA

mRNA sequence

TATGTGCACCAGAAGTATGTTTCCTTTCACCTCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTCAAATACATGGTTTCCGGCATTCCTATACCTCCTGATCTCCTCTTCAGTATTAAAAGAAGTACCTTGGACTCTCCTTTCACTTCTAAGCTTTTCCCCCACCATCCTCAACATGTAGGGTGGAACTATTTGCAAATGAGTTTAGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGAAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTATCCAGATTCCAAGTACTGCGAGAGGCACATGCATAGAGGCAAAAATCGTTCAAGAAAGCCTGTGGATGTTTTGAAAACGACAGCAACAAATGATATTAACCGCCTTTCAAATCCAGCGTTTTCTTCCCTAACCAACAATTCATCCCTACTCTCCTATCGGCCCTTCCCCGCTCATCAAATATCTTCAACTTCTAATGGGAATGGCATATCACCCCAAGACACTAATACCCTCTTGCTTCTGGAATCTGGTTCTTACTCGGACAGAAACCCAGATTACAGTATTGAGATTCTGACTTTTGTCCATCTTCTGTTATTAACAAGAAGAAGTAGGGACACTTATGGGCTAAAAGAGAAAGTAGATGAGTATGCCTTCTTCTCGCAAGAACCATCTGAAACTGCTGCAAGAGCCGATTCTCTGCAACTGACACCACTAACGATGAGTTGTTCTTCTCTATATCCAAAACAGAACAACTGCTCTTCTTTGCAGAATGATCAGTCCTGCTATCAGCTTCATCAGAGCCTCGCAGACCCTTTGAAGCAACAAAAGAGAGATGAATCACAGAAGACAGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAGAGAGGATCACGGCTTGATTTCGAAGATAAATCATCAAATACTGGCTCAGTTCCCACCATTCGGCCCTCAACTTCCATTCCCACCACTTCCAATGACTTCCCCATTTTCGGATTCAACAACCCA

Coding sequence (CDS)

ATGTGCACCAGAAGTATGTTTCCTTTCACCTCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTCAAATACATGGTTTCCGGCATTCCTATACCTCCTGATCTCCTCTTCAGTATTAAAAGAAGTACCTTGGACTCTCCTTTCACTTCTAAGCTTTTCCCCCACCATCCTCAACATGTAGGGTGGAACTATTTGCAAATGAGTTTAGGGAGGAAGATAGACCCAGAACCAGGGAGGTGCAGAAGAACTGATGGGAAAAAGTGGAGATGCTCAAAAGAGGCGTATCCAGATTCCAAGTACTGCGAGAGGCACATGCATAGAGGCAAAAATCGTTCAAGAAAGCCTGTGGATGTTTTGAAAACGACAGCAACAAATGATATTAACCGCCTTTCAAATCCAGCGTTTTCTTCCCTAACCAACAATTCATCCCTACTCTCCTATCGGCCCTTCCCCGCTCATCAAATATCTTCAACTTCTAATGGGAATGGCATATCACCCCAAGACACTAATACCCTCTTGCTTCTGGAATCTGGTTCTTACTCGGACAGAAACCCAGATTACAGTATTGAGATTCTGACTTTTGTCCATCTTCTGTTATTAACAAGAAGAAGTAGGGACACTTATGGGCTAAAAGAGAAAGTAGATGAGTATGCCTTCTTCTCGCAAGAACCATCTGAAACTGCTGCAAGAGCCGATTCTCTGCAACTGACACCACTAACGATGAGTTGTTCTTCTCTATATCCAAAACAGAACAACTGCTCTTCTTTGCAGAATGATCAGTCCTGCTATCAGCTTCATCAGAGCCTCGCAGACCCTTTGAAGCAACAAAAGAGAGATGAATCACAGAAGACAGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAGAGAGGATCACGGCTTGATTTCGAAGATAAATCATCAAATACTGGCTCAGTTCCCACCATTCGGCCCTCAACTTCCATTCCCACCACTTCCAATGACTTCCCCATTTTCGGATTCAACAACCCA

Protein sequence

MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQHVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESGSYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTPLTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERGSRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP

Homology

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BLAST of Carg21934 vs. NCBI nr
Match: KAG7021963.1 (Growth-regulating factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 690.3 bits (1780), Expect = 8.5e-195
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ
Sbjct: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG
Sbjct: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240
           SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP
Sbjct: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240

Query: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG 300
           LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG
Sbjct: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG 300

Query: 301 SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP
Sbjct: 301 SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 339

[Close]

BLAST of Carg21934 vs. NCBI nr
Match: XP_023529974.1 (growth-regulating factor 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 648.7 bits (1672), Expect = 2.9e-182
Identity = 321/339 (94.69%), Postives = 323/339 (95.28%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ
Sbjct: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNG+SPQDTNTLLLLESG
Sbjct: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGLSPQDTNTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240
           SYSDRNPDY              RRSRDTYGLKEKVDEYAFFSQEPSE+AARADSLQLTP
Sbjct: 181 SYSDRNPDY--------------RRSRDTYGLKEKVDEYAFFSQEPSESAARADSLQLTP 240

Query: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG 300
           LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSL DPLKQQKRDESQKTVHRFFDEWPPKERG
Sbjct: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLTDPLKQQKRDESQKTVHRFFDEWPPKERG 300

Query: 301 SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           SRLDFEDKSSNTGSV TIRPSTSIPTTSNDFPIFGFNNP
Sbjct: 301 SRLDFEDKSSNTGSVSTIRPSTSIPTTSNDFPIFGFNNP 325

[Close]

BLAST of Carg21934 vs. NCBI nr
Match: XP_022932403.1 (growth-regulating factor 5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 648.3 bits (1671), Expect = 3.7e-182
Identity = 322/339 (94.99%), Postives = 322/339 (94.99%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ
Sbjct: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG
Sbjct: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240
           SYSDRNPDY              RRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP
Sbjct: 181 SYSDRNPDY--------------RRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240

Query: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG 300
           LTMSCSSLYPKQNNCSSLQNDQSCYQ HQSL DPLKQQKRDESQKTVHRFFDEWPPKERG
Sbjct: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQPHQSLTDPLKQQKRDESQKTVHRFFDEWPPKERG 300

Query: 301 SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           SRLDFEDKSSNTGSV TIRPSTSIPTTSNDFPIFGFNNP
Sbjct: 301 SRLDFEDKSSNTGSVSTIRPSTSIPTTSNDFPIFGFNNP 325

[Close]

BLAST of Carg21934 vs. NCBI nr
Match: XP_023529975.1 (growth-regulating factor 5-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.4 bits (1666), Expect = 1.4e-181
Identity = 320/339 (94.40%), Postives = 322/339 (94.99%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ
Sbjct: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNG+SPQDTNTLLLLESG
Sbjct: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGLSPQDTNTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240
           SYSDRNPDY               RSRDTYGLKEKVDEYAFFSQEPSE+AARADSLQLTP
Sbjct: 181 SYSDRNPDY---------------RSRDTYGLKEKVDEYAFFSQEPSESAARADSLQLTP 240

Query: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG 300
           LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSL DPLKQQKRDESQKTVHRFFDEWPPKERG
Sbjct: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLTDPLKQQKRDESQKTVHRFFDEWPPKERG 300

Query: 301 SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           SRLDFEDKSSNTGSV TIRPSTSIPTTSNDFPIFGFNNP
Sbjct: 301 SRLDFEDKSSNTGSVSTIRPSTSIPTTSNDFPIFGFNNP 324

[Close]

BLAST of Carg21934 vs. NCBI nr
Match: XP_022932412.1 (growth-regulating factor 5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 646.0 bits (1665), Expect = 1.8e-181
Identity = 321/339 (94.69%), Postives = 321/339 (94.69%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ
Sbjct: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG
Sbjct: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240
           SYSDRNPDY               RSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP
Sbjct: 181 SYSDRNPDY---------------RSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240

Query: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG 300
           LTMSCSSLYPKQNNCSSLQNDQSCYQ HQSL DPLKQQKRDESQKTVHRFFDEWPPKERG
Sbjct: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQPHQSLTDPLKQQKRDESQKTVHRFFDEWPPKERG 300

Query: 301 SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           SRLDFEDKSSNTGSV TIRPSTSIPTTSNDFPIFGFNNP
Sbjct: 301 SRLDFEDKSSNTGSVSTIRPSTSIPTTSNDFPIFGFNNP 324

[Close]

BLAST of Carg21934 vs. ExPASy Swiss-Prot
Match: Q8L8A6 (Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.8e-47
Identity = 97/178 (54.49%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQHVGWNYL 67
           PFT  QW+ELEHQALI+KYMVSG+P+PP+L+FSI+RS LD+   S+L PH  Q +GW   
Sbjct: 16  PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPH--QSLGWGCY 75

Query: 68  QMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATN 127
           QM  GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK +D  +TT T 
Sbjct: 76  QMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLDQNQTTTT- 135

Query: 128 DINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESGSYSDR 186
               L++P+ S   NN+        P+  +SS+S+ N  S   + +   +++ S S+R
Sbjct: 136 ---PLTSPSLSFTNNNN--------PSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNR 178

[Close]

BLAST of Carg21934 vs. ExPASy Swiss-Prot
Match: A2XA73 (Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 147/385 (38.18%), Postives = 182/385 (47.27%), Query Frame = 0


Query: 7   FPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRS-TLDSPFT---SKLFPHHPQHV 66
           +PFT++QWQELEHQALI+KYM SG PIP DL+  ++RS  LDS      S  FP  P  +
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPS-L 76

Query: 67  GWNYLQMSLGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVL 126
           GW    M  GRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPV++ 
Sbjct: 77  GWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMS 136

Query: 127 KTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESGS 186
             T        S+ A S+ +N+S+     P      S   + +  +P D      L  G 
Sbjct: 137 LATPPPP----SSSATSAASNSSA--GVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGGP 196

Query: 187 Y---SDRNP---DYSIEILTFVHLLLLTRR--------SRD----TYG--LKEKVDEYAF 246
           Y   + R P    Y  ++  F HL + T          S D     YG   KE   E+AF
Sbjct: 197 YAAATARTPAAAAYHAQVSPF-HLHIDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHAF 256

Query: 247 FS----QEPSETAARADSLQLTPLTM----SCSSLYP----------------------- 306
           FS    +E    AA     Q   L M    S + L+P                       
Sbjct: 257 FSDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDDE 316

Query: 307 KQNNCSSLQNDQSCYQLHQS--LADPLKQQKRDESQKTVHRFFDEWPPKERGSRLDFEDK 334
           K+      Q  Q C+ L     L  P        +QK +  FFDEWP ++         K
Sbjct: 317 KERRQQQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEK-------NSK 376

[Close]

BLAST of Carg21934 vs. ExPASy Swiss-Prot
Match: Q6AWY8 (Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.5e-42
Identity = 147/386 (38.08%), Postives = 181/386 (46.89%), Query Frame = 0


Query: 7   FPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRS-TLDSPFT---SKLFPHHPQHV 66
           +PFT++QWQELEHQALI+KYM SG PIP DL+  ++RS  LDS      S  FP  P  +
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPS-L 76

Query: 67  GWNYLQMSLGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVL 126
           GW    M  GRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPV++ 
Sbjct: 77  GWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMS 136

Query: 127 KTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESGS 186
             T        S+ A S+ +N S+     P      S   + +  +P D      L  G 
Sbjct: 137 LATPPPP----SSSATSAASNTSA--GVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGGP 196

Query: 187 Y---SDRNP---DYSIEILTFVHLLLLTRR--------SRD----TYG--LKEKVDEYAF 246
           Y   + R P    Y  ++  F HL L T          S D     YG   KE   E+AF
Sbjct: 197 YAAATARTPAAAAYHAQVSPF-HLQLDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHAF 256

Query: 247 FS----QEPSETAARADSLQLTPLTM----SCSSLYP----------------------- 306
           FS    +E    AA     Q   L M    S + L+P                       
Sbjct: 257 FSDGTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDDE 316

Query: 307 -KQNNCSSLQNDQSCYQLHQS--LADPLKQQKRDESQKTVHRFFDEWPPKERGSRLDFED 334
            ++      Q  Q C+ L     L  P        +QK +  FFDEWP ++         
Sbjct: 317 KERRQQQQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEK-------NS 376

[Close]

BLAST of Carg21934 vs. ExPASy Swiss-Prot
Match: Q6ZIK5 (Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 130/340 (38.24%), Postives = 182/340 (53.53%), Query Frame = 0


Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQHVGWNYL 67
           PFT+AQ++ELE QALI+KY+V+G+P+PPDL+  I+R  LDS   +  F +HP  +G+   
Sbjct: 64  PFTAAQYEELEQQALIYKYLVAGVPVPPDLVLPIRRG-LDS--LAARFYNHPA-LGYG-- 123

Query: 68  QMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD---VLKTT 127
               G+K+DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRG+NRSRKPV+   V ++ 
Sbjct: 124 -PYFGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVETQLVAQSQ 183

Query: 128 ATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESGSYSD 187
             + +   +    ++ +N SS  ++  +PA  I+ ++ G G     ++    L S  + D
Sbjct: 184 PPSSVVGSAAAPLAAASNGSSFQNHSLYPA--IAGSNGGGGGRNMPSSFGSALGSQLHMD 243

Query: 188 RNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAA----RADSLQLTP 247
               Y+         L  T      YG +   DE +    E   T+     R    Q +P
Sbjct: 244 NAAPYAAVGGGTGKDLRYT-----AYGTRSLADEQSQLITEAINTSIENPWRLLPSQNSP 303

Query: 248 LTMSCSSLYPK-----QNNCSSLQNDQ----SCYQLHQSLADPLKQQKRDESQKTVHRFF 307
             +S  S         QN  SSL   Q    S +    +  D +KQ+      +T+  FF
Sbjct: 304 FPLSSYSQLGALSDLGQNTPSSLSKVQRQPLSFFGNDYAAVDSVKQE-----NQTLRPFF 363

Query: 308 DEWPPKERGSRLDFEDKSSNTGSVPTIRPSTSIPTTSNDF 332
           DEW PK R S  D  D+++N  S    + S SIP  S+DF
Sbjct: 364 DEW-PKGRDSWSDLADENANLSSFSGTQLSISIPMASSDF 383

[Close]

BLAST of Carg21934 vs. ExPASy Swiss-Prot
Match: Q9ZQ12 (Growth-regulating factor 6 OS=Arabidopsis thaliana OX=3702 GN=GRF6 PE=1 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 3.6e-39
Identity = 80/125 (64.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR------STLDSPFTSKL 60
           M TR   PFT +QW+ELE+QAL+FKY+ + +P+PP LLF IKR      S+  S  +S  
Sbjct: 1   MATR--IPFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFF 60

Query: 61  FPHHPQHVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR- 118
            P    H GWN  +M +GRKID EPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR 
Sbjct: 61  SPTLSPHFGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRS 120

[Close]

BLAST of Carg21934 vs. ExPASy TrEMBL
Match: A0A6J1F1K4 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111438762 PE=3 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 1.8e-182
Identity = 322/339 (94.99%), Postives = 322/339 (94.99%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ
Sbjct: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG
Sbjct: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240
           SYSDRNPDY              RRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP
Sbjct: 181 SYSDRNPDY--------------RRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240

Query: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG 300
           LTMSCSSLYPKQNNCSSLQNDQSCYQ HQSL DPLKQQKRDESQKTVHRFFDEWPPKERG
Sbjct: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQPHQSLTDPLKQQKRDESQKTVHRFFDEWPPKERG 300

Query: 301 SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           SRLDFEDKSSNTGSV TIRPSTSIPTTSNDFPIFGFNNP
Sbjct: 301 SRLDFEDKSSNTGSVSTIRPSTSIPTTSNDFPIFGFNNP 325

[Close]

BLAST of Carg21934 vs. ExPASy TrEMBL
Match: A0A6J1EWL2 (Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111438762 PE=3 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 9.0e-182
Identity = 321/339 (94.69%), Postives = 321/339 (94.69%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ
Sbjct: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG
Sbjct: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240
           SYSDRNPDY               RSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP
Sbjct: 181 SYSDRNPDY---------------RSRDTYGLKEKVDEYAFFSQEPSETAARADSLQLTP 240

Query: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFDEWPPKERG 300
           LTMSCSSLYPKQNNCSSLQNDQSCYQ HQSL DPLKQQKRDESQKTVHRFFDEWPPKERG
Sbjct: 241 LTMSCSSLYPKQNNCSSLQNDQSCYQPHQSLTDPLKQQKRDESQKTVHRFFDEWPPKERG 300

Query: 301 SRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           SRLDFEDKSSNTGSV TIRPSTSIPTTSNDFPIFGFNNP
Sbjct: 301 SRLDFEDKSSNTGSVSTIRPSTSIPTTSNDFPIFGFNNP 324

[Close]

BLAST of Carg21934 vs. ExPASy TrEMBL
Match: A0A6J1D0G4 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 2.3e-161
Identity = 292/347 (84.15%), Postives = 302/347 (87.03%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           M  RSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDIN LSNPAFSSLTNNSS+LSYRPFPAHQIS T NGN IS QDT+TLLLLESG
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAAR-------- 240
           SYSDRNPDY              RRSR TYGL+E VDE+ FFSQEPSET +R        
Sbjct: 181 SYSDRNPDY--------------RRSRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSM 240

Query: 241 ADSLQLTPLTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFD 300
           ADSLQLTPL+MSCSSLYPKQNNCSSLQNDQSCYQ+H+SL DPLKQQKRDESQKTVHRFFD
Sbjct: 241 ADSLQLTPLSMSCSSLYPKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFD 300

Query: 301 EWPPKERGSRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           EWPPKERGS LDF+DK+SN GSV T R S SIPT SNDFPIF   NP
Sbjct: 301 EWPPKERGSWLDFDDKTSNNGSVSTTRLSISIPTASNDFPIFRSKNP 333

[Close]

BLAST of Carg21934 vs. ExPASy TrEMBL
Match: A0A6J1D2Q2 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160
Identity = 291/347 (83.86%), Postives = 301/347 (86.74%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           M  RSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDIN LSNPAFSSLTNNSS+LSYRPFPAHQIS T NGN IS QDT+TLLLLESG
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAAR-------- 240
           SYSDRNPDY               RSR TYGL+E VDE+ FFSQEPSET +R        
Sbjct: 181 SYSDRNPDY---------------RSRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSM 240

Query: 241 ADSLQLTPLTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFD 300
           ADSLQLTPL+MSCSSLYPKQNNCSSLQNDQSCYQ+H+SL DPLKQQKRDESQKTVHRFFD
Sbjct: 241 ADSLQLTPLSMSCSSLYPKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFD 300

Query: 301 EWPPKERGSRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           EWPPKERGS LDF+DK+SN GSV T R S SIPT SNDFPIF   NP
Sbjct: 301 EWPPKERGSWLDFDDKTSNNGSVSTTRLSISIPTASNDFPIFRSKNP 332

[Close]

BLAST of Carg21934 vs. ExPASy TrEMBL
Match: A0A6J1D2N6 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=1)

HSP 1 Score: 571.6 bits (1472), Expect = 2.1e-159
Identity = 289/347 (83.29%), Postives = 299/347 (86.17%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQ 60
           M  RSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 LKTTATNDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESG 180
           LKTTATNDIN LSNPAFSSLTNNSS+LSYRPFPAHQIS T NGN IS QDT+TLLLLESG
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAAR-------- 240
           SYSDRNPDY                 R TYGL+E VDE+ FFSQEPSET +R        
Sbjct: 181 SYSDRNPDY-----------------RYTYGLREDVDEHVFFSQEPSETTSRTDFSASSM 240

Query: 241 ADSLQLTPLTMSCSSLYPKQNNCSSLQNDQSCYQLHQSLADPLKQQKRDESQKTVHRFFD 300
           ADSLQLTPL+MSCSSLYPKQNNCSSLQNDQSCYQ+H+SL DPLKQQKRDESQKTVHRFFD
Sbjct: 241 ADSLQLTPLSMSCSSLYPKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFD 300

Query: 301 EWPPKERGSRLDFEDKSSNTGSVPTIRPSTSIPTTSNDFPIFGFNNP 340
           EWPPKERGS LDF+DK+SN GSV T R S SIPT SNDFPIF   NP
Sbjct: 301 EWPPKERGSWLDFDDKTSNNGSVSTTRLSISIPTASNDFPIFRSKNP 330

[Close]

BLAST of Carg21934 vs. TAIR 10
Match: AT3G13960.1 (growth-regulating factor 5 )

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-48
Identity = 97/178 (54.49%), Postives = 127/178 (71.35%), Query Frame = 0


Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQHVGWNYL 67
           PFT  QW+ELEHQALI+KYMVSG+P+PP+L+FSI+RS LD+   S+L PH  Q +GW   
Sbjct: 16  PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPH--QSLGWGCY 75

Query: 68  QMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTATN 127
           QM  GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK +D  +TT T 
Sbjct: 76  QMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLDQNQTTTT- 135

Query: 128 DINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNGISPQDTNTLLLLESGSYSDR 186
               L++P+ S   NN+        P+  +SS+S+ N  S   + +   +++ S S+R
Sbjct: 136 ---PLTSPSLSFTNNNN--------PSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNR 178

[Close]

BLAST of Carg21934 vs. TAIR 10
Match: AT2G06200.1 (growth-regulating factor 6 )

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-40
Identity = 80/125 (64.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MCTRSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR------STLDSPFTSKL 60
           M TR   PFT +QW+ELE+QAL+FKY+ + +P+PP LLF IKR      S+  S  +S  
Sbjct: 1   MATR--IPFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFF 60

Query: 61  FPHHPQHVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR- 118
            P    H GWN  +M +GRKID EPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR 
Sbjct: 61  SPTLSPHFGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRS 120

[Close]

BLAST of Carg21934 vs. TAIR 10
Match: AT4G37740.1 (growth-regulating factor 2 )

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-31
Identity = 69/145 (47.59%), Postives = 89/145 (61.38%), Query Frame = 0


Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHPQHVGWNYL 67
           PFT  QW ELE QALI+KY+ + +P+P  LL SIK+S    P+ S      P   GW   
Sbjct: 164 PFTLTQWAELEQQALIYKYITANVPVPSSLLISIKKSFY--PYGSL----PPSSFGWGTF 223

Query: 68  QMSL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV------ 127
            +   G  +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPV+V      
Sbjct: 224 HLGFAGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEVQSGQNQ 283

Query: 128 LKTTATNDINRLSNPAFSSLTNNSS 146
               A+  +     P  +  TN S+
Sbjct: 284 TAAAASKAVTTPQQPVVAGNTNRSN 302

[Close]

BLAST of Carg21934 vs. TAIR 10
Match: AT2G36400.1 (growth-regulating factor 3 )

HSP 1 Score: 132.5 bits (332), Expect = 6.4e-31
Identity = 96/267 (35.96%), Postives = 134/267 (50.19%), Query Frame = 0


Query: 9   FTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPHHP-QHVGWNYL 68
           F+ AQWQELE QALI++YM++G  +P +LL  IK+S L    +   F HHP QH+     
Sbjct: 77  FSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLLH--LSPSYFLHHPLQHLPHYQP 136

Query: 69  QMSLGR-KIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKTTAT 128
              LGR  +DPEPGRCRRTDGKKWRCS++ +   KYCERHMHRG+NRSRKPV+   T   
Sbjct: 137 AWYLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVETPTTVNA 196

Query: 129 NDINRLSNPAFSSLTNNSSLLSYRPFPAHQISSTSNGNG------ISPQDTNTLLLL--- 188
              +  S+ A ++ T  ++  S   F     S    G G       S   ++ LL L   
Sbjct: 197 TATSMASSVAAAATTTTATTTSTFAFGGGGGSEEVVGQGGSFFFSGSSNSSSELLHLSQS 256

Query: 189 ------ESGSYSDRNPDYSIEILTFVHLLLLTRRSRDTYGLKEKVDEYAFFSQEPSETAA 248
                 ES + +++ P  S       H+     RS   + L+       FF   P  +  
Sbjct: 257 CSEMKQESNNMNNKRPYES-------HIGFSNNRSDGGHILR------PFFDDWPRSSLQ 316

Query: 249 RADSLQLTPLTMSCSSLYPKQNNCSSL 259
            AD+      + +C S+    N+ S +
Sbjct: 317 EADNSSSPMSSATCLSISMPGNSSSDV 328

[Close]

BLAST of Carg21934 vs. TAIR 10
Match: AT2G22840.1 (growth-regulating factor 1 )

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-30
Identity = 66/136 (48.53%), Postives = 85/136 (62.50%), Query Frame = 0


Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSPFTSKLFPH---HPQHVGW 67
           PF+  QW ELE QALI+KY+ + +P+P  LL S+K+S          FP+    P   GW
Sbjct: 133 PFSLTQWAELEQQALIYKYITANVPVPSSLLLSLKKS---------FFPYGSLPPNSFGW 192

Query: 68  NYLQMSL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVLKT 127
               +   G  +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPV+    
Sbjct: 193 GSFHLGFSGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEGQNG 252

Query: 128 TATNDINRLSNPAFSS 140
             TN     S  A S+
Sbjct: 253 HNTNAAAAASAAAAST 259

The following BLAST results are available for this feature:

BLAST of Carg21934 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7021963.1	8.5e-195	100.00	Growth-regulating factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023529974.1	2.9e-182	94.69	growth-regulating factor 5-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022932403.1	3.7e-182	94.99	growth-regulating factor 5-like isoform X1 [Cucurbita moschata]	[more]
XP_023529975.1	1.4e-181	94.40	growth-regulating factor 5-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022932412.1	1.8e-181	94.69	growth-regulating factor 5-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg21934 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8A6	2.8e-47	54.49	Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1	[more]
A2XA73	1.2e-42	38.18	Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 S...	[more]
Q6AWY8	3.5e-42	38.08	Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3...	[more]
Q6ZIK5	1.1e-40	38.24	Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1...	[more]
Q9ZQ12	3.6e-39	64.00	Growth-regulating factor 6 OS=Arabidopsis thaliana OX=3702 GN=GRF6 PE=1 SV=2	[more]

BLAST of Carg21934 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F1K4	1.8e-182	94.99	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111438762 PE=3 SV=1	[more]
A0A6J1EWL2	9.0e-182	94.69	Growth-regulating factor OS=Cucurbita moschata OX=3662 GN=LOC111438762 PE=3 SV=1	[more]
A0A6J1D0G4	2.3e-161	84.15	Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=...	[more]
A0A6J1D2Q2	1.1e-160	83.86	Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=...	[more]
A0A6J1D2N6	2.1e-159	83.29	Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=...	[more]

BLAST of Carg21934 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13960.1	2.0e-48	54.49	growth-regulating factor 5	[more]
AT2G06200.1	2.6e-40	64.00	growth-regulating factor 6	[more]
AT4G37740.1	2.9e-31	47.59	growth-regulating factor 2	[more]
AT2G36400.1	6.4e-31	35.96	growth-regulating factor 3	[more]
AT2G22840.1	1.4e-30	48.53	growth-regulating factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014978	Glutamine-Leucine-Glutamine, QLQ	SMART	SM00951	QLQ_2	coord: 7..43 e-value: 4.0E-12 score: 56.3
IPR014978	Glutamine-Leucine-Glutamine, QLQ	PFAM	PF08880	QLQ	coord: 8..41 e-value: 1.8E-15 score: 56.3
IPR014978	Glutamine-Leucine-Glutamine, QLQ	PROSITE	PS51666	QLQ	coord: 8..43 score: 22.68881
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 77..118 e-value: 1.1E-20 score: 73.0
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 76..120 score: 24.764948
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..339
None	No IPR available	PANTHER	PTHR31602:SF46	GROWTH-REGULATING FACTOR 6	coord: 5..318
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 5..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21934-RA	Carg21934-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding