Carg21928 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCCGTTACGACCAAAAGATTCCTAATGCTGAAATTTGTTGCAGAAGAATCAGTCTCTCTCTCTCTCTCCCTCTGGAAAAATCACCGATCATCGAAATCTGAGAAGCAAAATTGGCGGTAACGAAAAGCTTCCACTGCGCAATTCCGTGTCCAATTCTTCTTCCATCTCCGTTTAAGCATCTACAATCCAAACATGGCAGCGGAGAGGCACGCCTCTTCGCGCGCAGCATCATCTCAAGACAACGCGATGTAATATTTTCCATAAATTTCAATCGTTTGATTGCATTTATTCTGTTTATTTCAAGCGTCCGATTGTTTGAATTCAGACTCCGCTATGTCTATGTTTTTGGAAATTTCAATTTTAGTTATTCCTCTGTAGTATTCTTCGTGATTTCAGTACGAATCCGACTGTCGAATGTTGAATCGACTTGCCTGAATGTTTTTGGACGATGAATCGGCTAATTTAGGGGATCATCATAGCTTTATAATCAAGGAATACTATCTCCATTGGAATGAGGTCTTTTGGGAAGCCCAAAGGAAAGCCACGAGAGCTTATGTTCAAAGTGGACAATATCATACCATTGTGGAGAGTTGTGTTTGTCTAACACTCTGTAGTATTATTCGTGATTTCAGTACGAATCCGACTGTCGAATGTTGAATTGACTCGCCTGAATGTTTTTTACTGTCTATCTTCCTTCGGTATTGATAGTTCCTTCATTGGACTGGTACAGGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAGAACAATTGGGAGCATAATTTATTGTCTTGTTTTGGCAAGTATAATCTCCATCTAAATGAACCAAAATCCATTTGTAATTCTAGTTAGGGAAAGTTCGATAGTTCTTGAATTGGCTGGCTTACTGTATTACTTTGCTTGAAAAGGCTGAAATGATTGCGTTTCTCCCCGATTTAGGTTGGCTATGCTGCTCTGGCTATTGGAGCACCATGGATTTTTCATCCTATAAAGCACTTGGTTGAACCGTTGCTCTGCAGTTGTGATGTTGTTCTGTTGATGCTCACAGGTGTTCTAATAAAGTCCAGAGCTATACTTACTCAGATAAACTAAAACTAACTATTTTCTGACGAAGTGACAATGTTATTTTCTGTTATTTATGTAGCCAGTTTACTTTTCGTCATTGCAAGGCTAAAAGTTTCTATTTAGTTCATTCTTAGGAATTCGAGCTGTTGAACTCGATTATTTTAACTCAACATCTTGACATATAATTTTTTTTTGCTCAATAATTCAACTAAAGAGATATGGTTATAGAACTTTATACTTGTTTAGAAATTAAACCGCGGTTTACTATTTCAGGTATCTTTCAGCAGTATCTAGTATATCAAGTTCATAAAATTCGTTTGCAGGTACTTACATTTATCAATGAAGAACTTTTTTTTGCTTCCTCTTTCCTTTGAAAATTTGAAGAGGTTGAAGGTTTTAAAGATTGAAGTTGCGATATGAACTAAAAGTACTATTGATTGATATTGGTGATGAAGAGAAAATGTTTTCCTTAGTGATGACTTCGTTTTCTGTTGGCTGAATGATCGTGATCTGCTAGATTAGTTATTTCTGTTGCAATATGTTTTCTTGAAGGAAGCCTGTCTTTTGGTCAATCTGGTGTTTCATTTCATGTTCTGTGGTTTACAATGCATTTGAATGGATTTTTTTTTTTTTTCCTTTCTCATTTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGTCTACCTTTCGCAGTTACTGCATATGGTATGTTAGATAGCTGTGCCGACTCAGTCTTTAAAAATTTTCACATTTTTGTGGTGTTGCTAAATGCCACATGGCAATGAAGCGTTTTTACCTGTTTTCCATTTTTTGACGATGGTGGATCCCGATTTTAAATAATTGTTCAATATCAGGAACTGCTGCCCTTTTACTCGTCATGGTATGGGAACCTCAAATCAGTGCACTTTCGATTCCCCTAATTCTGAGGTAGTGAGGTTATACATGTGAATGTTGTCTAGTAGTTTTTCCAGTTAACTGTTATTTACTTTCATTCCCTTCATCGTCACCTTCCCATGGCGATATCTTTTATTAAGACCATGTATCTGATCACCCAAAGATGTTCTATTTATATTTTCTGGATTTTATTACAACCATGGATGTTCCATTATTATCATATTCTGACTGTATGCAAATGTCCTACCTTAATTTTCCATTTTTTGTCATTTTGTTGCTTATTGATCGTATCATTAGAAGCTTCTCCTTTCAAAGCTTACTCCTTAGTTTACATACTTAATCCATGTCCCCATCTTTAGCTAGCTGTACACTACTGACAAAATGTTGTGCTGGATGCCCCTTTTATATCTGCAGGATGATTATGTTAATTGAAGCAGTATGTGCTGGATCGTTTATGGTTATATATATCAGTAAGTTTTATGTATTCATGGGATCTCTTCAGGAGTTGATTGGTACCAATAGTGTTTTCGTTTATTGAATTATTTGTTATTTTTACTCATTTTCTTAGGTCAGTAAGTTCCTTTCATTATAGAGAAACTGTGACTTTGTAATTTGGAGAGTAACATGTTATTGGATGTAGGCTTAGTTTCGGATTGCCGTAAGTTTTAAAATAATCAATTGCAGCTTTTAGAAAAAAACTAACTGTGATATGAATTAAATCAATGTTTGGTAAATTTCGTACTTGAACGTGAAAAAGGTATAATAAAATGGAAACTTTTACAAATTTGATGTGATTAATATTGTCATGCGTGCAATGCAGGTTATGTACAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCCCCACTTCAGCAATCAACTTCTTTGGAAGATCTAAGGTTATATTAAACTGATCACTATACGCTGCTCTTTAGTCTGTATTAGAGTCTAGGTAGTCACTGTGTCTTAGAAAATAATTGTTCAAATACATTTTCGCTAAACCTATTTGATTCTAATTGATTATGAGTTTTTTGGGAAGTTACATTTTTCTCCTATGAAAATAGTGGTAACTTCAGATGACTCGATTTTTTCTTCACATGAATAAAGATTAAGAATTCTTTGGTGGAACAGGTATCATGATGTCGGACGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTAAATGAGGAGGTATATAGTAACCTTATACACATACTTACCTCAAGATGGTTTGGCACCCAGCCGCTTCCTTTCGTCATGCTCTTCTCCCTGTTCCTATTGGAAAGAGCTCATTCAATTGGTAAAGTAGATATTTAGTACCCATTAGATGTCTAGCCTGTAACCTTTGTTCCTGAACCTCTCAGATTCTTCGGTTGCAAGAGTGCTTAAGTAAATATGAACGGTCTAGCGATGGAAGCACTCCTCAGGTGATCATTGTTAATCTGATATTTGATGTTTTTTTTAGATTTTATCTGTATAGTACTTGTATAACTAAAGTTTGTACTGGTTTGTAAGATATCATTCATGTGTCGAGCCTAAGAAGCACAAACACAAGCATGACGACACGACAATGTCTTAAATGAAGTAGGACACAAACATGTTGGAGAGATGTTTCTTTTTAGAATATGCCTATATTGGTATATTTAATATTTCATAATAAATACAAAGAAAGTAAATTCAACATAAATATCGTTTGATCTTGAAGTGTTAGTGTTGGATGTGTTTTTAGATAATATTGTCGTTTGATCTTGAAGTCTCCTGGTTTTGTTATCTACTTCATTAGAGTATCTGAAAATGAAAATTTTCTCACATGATAGTCAAGGATGAAGGAATATGTGAAGGAATGTAATATGAATGAAAATGGCTGTAGTTACCGGTGGCTCCTTTTTCAGGTTGACCTTGCCCATATGCTAGCTGCTCGTGACCAGGAATTGAGGACACTTTCAGCTGAGGTATGTCTTGCATACAGTACTATGGTTATGCTTTTATTTCATTTTTAATAACATCCAACTTATGTGCATTCAACTAATTTATTGGGATGTCAGATCCTACTTGTATTATTTAAAGATATTCGGTTTTACTGTCCTGTTTTTTTATCACTCGGCCAACTTATGCTGGTTTGCTGTGGGTGTGCTTCCATGACCTTGAAGTATATTGTCAGCTTAAATTATTGTTTAACAACTCAAATTCACCACGAGCCGACATTGTCTTTTTTAGGCTTTCCCTTTTGGGCTTCCCCTCAAGGTTTTTAAAATGCGTCTGCTAGTGAGAAGTTTCTACACTCTTGTAAAGAACATTTCGTTTCCCTCTCCAATCGATGTGGGATCTCACAATCCACTTCACTTCGGGGCCCAACGTCGTCACTAGCACTTGTTTCCTTCTTCCAATTGATGTGAGATCTCACAATCTACCCCCCTTCGAGATCCAATATCCTCGTTGACACGTCGCTTGGTGTCCACCCCCTCTGGGGCTCAGTGTCCTTGCTGACATATGGCCTGGAGTCTGGCTCTAATACCATTTGTAACGGCCCAAGCCTACCACTAGTAGATATTGTCCTCTTTGGATTAGAGAGAAGTTTCTACATCCTTGTAAAGTATTCTTCGTTCCGCTCTCCAACCGATGTGGGATCTCACAGAAATTACTTTGACCACACCAGCAATCATAATTTTCCGTAACAATTGAATTATATGTTGCAGATGAATCAGGTAACATCAGAACTTAGGCTTGCTCGATCTGTGATAGCTGAGAGGGATACCGAGATTCAGAAATTACTCATCACCAACAAGCAGGTACTAATTTGAACATCATCCAACCCGACGTCCTCTCACACATTGCATATGGGCAAAACCTTCTATCTGTGAATTTAACATCTTGCCATCCATGAATAGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGAGCTGCTAAGGTACATCACTGCTTATTCTACTACCTTCATTTGATGGAACAAATAATATCTTGAATTCGCTAAAGCAATGACCTTTTATCGTTGCGCCAAAGCTTGAGAGAGCGCTTGAAGGCGAGCGTTTATCAAATAATGAATTGCAAAGGAGGATTTCAACACTAAAAAAGCATCAGAGCAGCAGGGGAGTTGATGCCTAACCGCCTTCCACAGGGTAAATTTATTCTCCATTGAATATAGATTGAGCAGCAGCAGATTAGACCGAGTTTTCTCCTGCGTTATGGTCTCCAACATTTGACCAAATGCAGGCAGCAGCTGTAAAGGAATGAAGGTTCGTTTTTTCTTTCTTTCTTTCATTCAAGATCCTTTAGATTTATTTTATTTTATTTTATCCTCCTCTCCTCTCTCTTTTGGACTCGCGAGTCATGACTAAGCATCAATTTCTTTGATTCCTCACGACACGAAATGACCAGAAATTTATTGTAAAACTAGATAAATCAGGAATGAGCTATTTCAATGTTATTGGATAATCGTGTTGCTTTTTCATAAGTGAGGTGATGAAATAGAATGTGTGCTGATTTTAT ATTCCGTTACGACCAAAAGATTCCTAATGCTGAAATTTGTTGCAGAAGAATCAGTCTCTCTCTCTCTCTCCCTCTGGAAAAATCACCGATCATCGAAATCTGAGAAGCAAAATTGGCGGTAACGAAAAGCTTCCACTGCGCAATTCCGTGTCCAATTCTTCTTCCATCTCCGTTTAAGCATCTACAATCCAAACATGGCAGCGGAGAGGCACGCCTCTTCGCGCGCAGCATCATCTCAAGACAACGCGATGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAGAACAATTGGGAGCATAATTTATTGTCTTGTTGGCTATGCTGCTCTGGCTATTGGAGCACCATGGATTTTTCATCCTATAAAGCACTTGGTTGAACCGTTGCTCTGCAGTTGTGATGTTGTTCTGTTGATGCTCACAGGTATCTTTCAGCAGTATCTAGTATATCAAGTTCATAAAATTCGTTTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGTCTACCTTTCGCAGTTACTGCATATGGAACTGCTGCCCTTTTACTCGTCATGGTATGGGAACCTCAAATCAGTGCACTTTCGATTCCCCTAATTCTGAGGATGATTATGTTAATTGAAGCAGTATGTGCTGGATCGTTTATGGTTATATATATCAGTTATGTACAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCCCCACTTCAGCAATCAACTTCTTTGGAAGATCTAAGGTATCATGATGTCGGACGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTAAATGAGGAGATTCTTCGGTTGCAAGAGTGCTTAAGTAAATATGAACGGTCTAGCGATGGAAGCACTCCTCAGGTTGACCTTGCCCATATGCTAGCTGCTCGTGACCAGGAATTGAGGACACTTTCAGCTGAGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGAGCTGCTAAGCTTGAGAGAGCGCTTGAAGGCGAGCGTTTATCAAATAATGAATTGCAAAGGAGGATTTCAACACTAAAAAAGCATCAGAGCAGCAGGGGAGTTGATGCCTAACCGCCTTCCACAGGGTAAATTTATTCTCCATTGAATATAGATTGAGCAGCAGCAGATTAGACCGAGTTTTCTCCTGCGTTATGGTCTCCAACATTTGACCAAATGCAGGCAGCAGCTGTAAAGGAATGAAGGTTCGTTTTTTCTTTCTTTCTTTCATTCAAGATCCTTTAGATTTATTTTATTTTATTTTATCCTCCTCTCCTCTCTCTTTTGGACTCGCGAGTCATGACTAAGCATCAATTTCTTTGATTCCTCACGACACGAAATGACCAGAAATTTATTGTAAAACTAGATAAATCAGGAATGAGCTATTTCAATGTTATTGGATAATCGTGTTGCTTTTTCATAAGTGAGGTGATGAAATAGAATGTGTGCTGATTTTAT ATGGCAGCGGAGAGGCACGCCTCTTCGCGCGCAGCATCATCTCAAGACAACGCGATGTTTCTTGATATACTGCATGAGGCCCCGTTATTTGGTCATCGGAAGCCTGCAAGAACAATTGGGAGCATAATTTATTGTCTTGTTGGCTATGCTGCTCTGGCTATTGGAGCACCATGGATTTTTCATCCTATAAAGCACTTGGTTGAACCGTTGCTCTGCAGTTGTGATGTTGTTCTGTTGATGCTCACAGGTATCTTTCAGCAGTATCTAGTATATCAAGTTCATAAAATTCGTTTGCAGGGTTATTATAGCTTTAGCCAGAAGTTAAAGCATATTGTTCGTCTACCTTTCGCAGTTACTGCATATGGAACTGCTGCCCTTTTACTCGTCATGGTATGGGAACCTCAAATCAGTGCACTTTCGATTCCCCTAATTCTGAGGATGATTATGTTAATTGAAGCAGTATGTGCTGGATCGTTTATGGTTATATATATCAGTTATGTACAAAAGTACAATTCATTAAATTCTCAGCCTGATGTTTTGAAGTCATTGTATTCCCCACTTCAGCAATCAACTTCTTTGGAAGATCTAAGGTATCATGATGTCGGACGACTTTCTGATCAGCAAATGGCTCTGTTGCAATATCAGCGAGAGAACCTTCATTTTCTAAATGAGGAGATTCTTCGGTTGCAAGAGTGCTTAAGTAAATATGAACGGTCTAGCGATGGAAGCACTCCTCAGGTTGACCTTGCCCATATGCTAGCTGCTCGTGACCAGGAATTGAGGACACTTTCAGCTGAGTATGTAGAAGAAAATGAAAGACTGAGAGCTATTCTAGGAGAATGGAGTACACGAGCTGCTAAGCTTGAGAGAGCGCTTGAAGGCGAGCGTTTATCAAATAATGAATTGCAAAGGAGGATTTCAACACTAAAAAAGCATCAGAGCAGCAGGGGAGTTGATGCCTAA MAAERHASSRAASSQDNAMFLDILHEAPLFGHRKPARTIGSIIYCLVGYAALAIGAPWIFHPIKHLVEPLLCSCDVVLLMLTGIFQQYLVYQVHKIRLQGYYSFSQKLKHIVRLPFAVTAYGTAALLLVMVWEPQISALSIPLILRMIMLIEAVCAGSFMVIYISYVQKYNSLNSQPDVLKSLYSPLQQSTSLEDLRYHDVGRLSDQQMALLQYQRENLHFLNEEILRLQECLSKYERSSDGSTPQVDLAHMLAARDQELRTLSAEYVEENERLRAILGEWSTRAAKLERALEGERLSNNELQRRISTLKKHQSSRGVDA Homology
BLAST of Carg21928 vs. NCBI nr
Match: KAG7021969.1 (Transmembrane protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 609.4 bits (1570), Expect = 1.8e-170 Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0
BLAST of Carg21928 vs. NCBI nr
Match: XP_022933192.1 (uncharacterized protein LOC111440041 isoform X1 [Cucurbita moschata] >KAG6588083.1 Protein FIP1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 586.6 bits (1511), Expect = 1.3e-163 Identity = 319/353 (90.37%), Postives = 319/353 (90.37%), Query Frame = 0
BLAST of Carg21928 vs. NCBI nr
Match: XP_022967730.1 (uncharacterized protein LOC111467166 isoform X1 [Cucurbita maxima]) HSP 1 Score: 586.3 bits (1510), Expect = 1.6e-163 Identity = 318/353 (90.08%), Postives = 319/353 (90.37%), Query Frame = 0
BLAST of Carg21928 vs. NCBI nr
Match: XP_023530740.1 (uncharacterized protein LOC111793195 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 584.7 bits (1506), Expect = 4.8e-163 Identity = 317/353 (89.80%), Postives = 319/353 (90.37%), Query Frame = 0
BLAST of Carg21928 vs. NCBI nr
Match: XP_038879093.1 (protein FIP1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 553.9 bits (1426), Expect = 9.0e-154 Identity = 299/344 (86.92%), Postives = 307/344 (89.24%), Query Frame = 0
BLAST of Carg21928 vs. ExPASy Swiss-Prot
Match: Q8S8K9 (Protein FIP1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 2.8e-113 Identity = 224/346 (64.74%), Postives = 265/346 (76.59%), Query Frame = 0
BLAST of Carg21928 vs. ExPASy TrEMBL
Match: A0A6J1EZ32 (uncharacterized protein LOC111440041 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111440041 PE=3 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 6.1e-164 Identity = 319/353 (90.37%), Postives = 319/353 (90.37%), Query Frame = 0
BLAST of Carg21928 vs. ExPASy TrEMBL
Match: A0A6J1HVA3 (uncharacterized protein LOC111467166 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467166 PE=3 SV=1) HSP 1 Score: 586.3 bits (1510), Expect = 7.9e-164 Identity = 318/353 (90.08%), Postives = 319/353 (90.37%), Query Frame = 0
BLAST of Carg21928 vs. ExPASy TrEMBL
Match: A0A1S3BRE8 (uncharacterized protein LOC103492369 OS=Cucumis melo OX=3656 GN=LOC103492369 PE=3 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 5.7e-154 Identity = 299/344 (86.92%), Postives = 307/344 (89.24%), Query Frame = 0
BLAST of Carg21928 vs. ExPASy TrEMBL
Match: A0A5A7UKR5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001600 PE=3 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 8.2e-153 Identity = 297/344 (86.34%), Postives = 305/344 (88.66%), Query Frame = 0
BLAST of Carg21928 vs. ExPASy TrEMBL
Match: A0A0A0M261 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G596510 PE=3 SV=1) HSP 1 Score: 549.3 bits (1414), Expect = 1.1e-152 Identity = 296/344 (86.05%), Postives = 305/344 (88.66%), Query Frame = 0
BLAST of Carg21928 vs. TAIR 10
Match: AT2G06005.1 (FRIGIDA interacting protein 1 ) HSP 1 Score: 409.8 bits (1052), Expect = 2.0e-114 Identity = 224/346 (64.74%), Postives = 265/346 (76.59%), Query Frame = 0
BLAST of Carg21928 vs. TAIR 10
Match: AT5G20580.2 (BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 387.1 bits (993), Expect = 1.4e-107 Identity = 215/344 (62.50%), Postives = 257/344 (74.71%), Query Frame = 0
BLAST of Carg21928 vs. TAIR 10
Match: AT5G20580.1 (BEST Arabidopsis thaliana protein match is: FRIGIDA interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast hits to 167 proteins in 73 species: Archae - 0; Bacteria - 25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). ) HSP 1 Score: 383.6 bits (984), Expect = 1.5e-106 Identity = 214/344 (62.21%), Postives = 256/344 (74.42%), Query Frame = 0
BLAST of Carg21928 vs. TAIR 10
Match: AT2G06005.2 (FRIGIDA interacting protein 1 ) HSP 1 Score: 310.8 bits (795), Expect = 1.2e-84 Identity = 179/286 (62.59%), Postives = 209/286 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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