Carg21909 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAAACCCTCTTCCCTTCTCCTCATGCATTGCTAATTCTCACAATATTCTTCTTCTTCCTTTCGCCCTCCATCGCCGACCAAGCTTGCCAAAAGAGCTGCGGCGACATCCCGCTGCGTTACCCTTTCGGCAGCGACACCGGCTGCGGCGACCCACGCTTCCACCCTCACATCACTTGCAACGACCATCAACAGCTAACCTTCACAACTCATACCGGCTGCTACCCCATCTCCTACATAGACTATGCCAACCAAGTCCTCTACATAACCGACCCCACTATGTCTACTTGCAGCTGCAACCAGCCTAGCAAGGGCTTCGGCCTTGACTGGGACGCCCCGTTCACGTTCCACGGCGATACCATCTTCGCCCTACTCGACTGCTCAAGCGCCTCTCCTGTTTACTCCCCGAATGGGATGTTCAACGACCGAAACAACTCGTCTCGGGTCGCTCTTTGCGATAACCGTGGATTACCCATTTGTGGATTCTTGTATGGGTGCAAGCCAATTGTTAGCCTCAATATTCCAATCTCTGGATGCTGTGTTTACACGCCTGTGAATTTTGGGCCATCTTTTGAAATGGACTTGGAGAAGCTTAAATGCGGTTCTTATTCTGGGTTTTATAGCTTTAATGGTAGAGAGTCGGATGCTGATAGCTGGAAATATGGAATTGCTATCAAATATAAGTTTGCAATTGATAATGTTTATCCAAGTTGGTGTTCAAGTTGTGAACAAAGTGGTGGGGTTTGTGGGTACTCAGGCCCTCTTGATTCTTTTATATGTAATTGTCCTCCTGGATTCAACACCACCACCAATTGTTTCTTTGGTGACTCTTTCAATGGCGCTTCAAAGTTTCTTCCAAACCAAAAATCATGTAAGTTCAATTACACCTCCCTTTTAATTATGATCTGATAGGAGACGTTCGCTAATTTAGGGAATAATCATGGGTTTGTAAGTAATGAATACATGTTCATTGGTCTGAGGCTTTTTGGGAAGCCTAAAGTAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTATGGAGGTTTATGGTTTCTAACATGGTATTAGAGTCATGCCCTTAACTTAGCGATGTCAATAGAATCCTCAGAGGTAGAACAAAGAAGTTGTGAGTCTCAAAGGTGTAGTCAAAAGTGACTCAATGGCGTACTTTGTTTGAGAACTCTAGAGAAGGAGTCGAGCCTCATTAAGAGGAGACTGTTTGAGGGCTCCATAGGCCTCGGGGAAGGTTCTGGGAGAAGATTGTTAGGAGAGAGTCCCACGTGCGCTAATTTAGGAAATGATCATGGGTTTATAGGATCTACTAATACCCAGTGGACAATATCATACTATTGTGTAGAGTCGTTATTCCTAACATATCCTTATTTCATCCTTGTACAGGGATTTGGCTAGCGGTCGGTTTGATCTTCAAGGATCTAAAATTTTAGAGCTCGAGAAGAAGTTGATGGGAAAAATAAAAGTATTAGTTAATTATGTATTGAAGAAGTTGTTTGTGTTTCCAAATAAGATCAAATTTGGTGTCCAAAGCTGTTAATTGAAGTAGAATTTTCAGCTTTATTATTTTATTAATGAATGGAACATAAAAAAGAGAAGGTAATGGAATCAGGTTCCCCTTTTTGTTGAGGATAATGATTCTATATCATCCACT ATGGAGCAAACCCTCTTCCCTTCTCCTCATGCATTGCTAATTCTCACAATATTCTTCTTCTTCCTTTCGCCCTCCATCGCCGACCAAGCTTGCCAAAAGAGCTGCGGCGACATCCCGCTGCGTTACCCTTTCGGCAGCGACACCGGCTGCGGCGACCCACGCTTCCACCCTCACATCACTTGCAACGACCATCAACAGCTAACCTTCACAACTCATACCGGCTGCTACCCCATCTCCTACATAGACTATGCCAACCAAGTCCTCTACATAACCGACCCCACTATGTCTACTTGCAGCTGCAACCAGCCTAGCAAGGGCTTCGGCCTTGACTGGGACGCCCCGTTCACGTTCCACGGCGATACCATCTTCGCCCTACTCGACTGCTCAAGCGCCTCTCCTGTTTACTCCCCGAATGGGATGTTCAACGACCGAAACAACTCGTCTCGGGTCGCTCTTTGCGATAACCGTGGATTACCCATTTGTGGATTCTTGTATGGGTGCAAGCCAATTGTTAGCCTCAATATTCCAATCTCTGGATGCTGTGTTTACACGCCTGTGAATTTTGGGCCATCTTTTGAAATGGACTTGGAGAAGCTTAAATGCGGTTCTTATTCTGGGTTTTATAGCTTTAATGGTAGAGAGTCGGATGCTGATAGCTGGAAATATGGAATTGCTATCAAATATAAGTTTGCAATTGATAATGTTTATCCAAGTTGGTGTTCAAGTTGTGAACAAAGTGGTGGGGAGACGTTCGCTAATTTAGGGAATAATCATGGGTTTGTAAGTAATGAATACATGTTCATTGGTCTGAGGCTTTTTGGGAAGCCTAAAGTAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTATGGAGAACTCTAGAGAAGGAGTCGAGCCTCATTAAGAGGAGACTGTTTGAGGGCTCCATAGGCCTCGGGGAAGGTTCTGGGAGAAGATTGTTAGGAGAGAGTCCCACGTGCGCTAATTTAGGAAATGATCATGGGGATTTGGCTAGCGGTCGGTTTGATCTTCAAGGATCTAAAATTTTAGAGCTCGAGAAGAAGTTGATGGGAAAAATAAAAGTATTAGTTAATTATGTATTGAAGAAGTTGTTTGTGTTTCCAAATAAGATCAAATTTGGTGTCCAAAGCTGTTAATTGAAGTAGAATTTTCAGCTTTATTATTTTATTAATGAATGGAACATAAAAAAGAGAAGGTAATGGAATCAGGTTCCCCTTTTTGTTGAGGATAATGATTCTATATCATCCACT ATGGAGCAAACCCTCTTCCCTTCTCCTCATGCATTGCTAATTCTCACAATATTCTTCTTCTTCCTTTCGCCCTCCATCGCCGACCAAGCTTGCCAAAAGAGCTGCGGCGACATCCCGCTGCGTTACCCTTTCGGCAGCGACACCGGCTGCGGCGACCCACGCTTCCACCCTCACATCACTTGCAACGACCATCAACAGCTAACCTTCACAACTCATACCGGCTGCTACCCCATCTCCTACATAGACTATGCCAACCAAGTCCTCTACATAACCGACCCCACTATGTCTACTTGCAGCTGCAACCAGCCTAGCAAGGGCTTCGGCCTTGACTGGGACGCCCCGTTCACGTTCCACGGCGATACCATCTTCGCCCTACTCGACTGCTCAAGCGCCTCTCCTGTTTACTCCCCGAATGGGATGTTCAACGACCGAAACAACTCGTCTCGGGTCGCTCTTTGCGATAACCGTGGATTACCCATTTGTGGATTCTTGTATGGGTGCAAGCCAATTGTTAGCCTCAATATTCCAATCTCTGGATGCTGTGTTTACACGCCTGTGAATTTTGGGCCATCTTTTGAAATGGACTTGGAGAAGCTTAAATGCGGTTCTTATTCTGGGTTTTATAGCTTTAATGGTAGAGAGTCGGATGCTGATAGCTGGAAATATGGAATTGCTATCAAATATAAGTTTGCAATTGATAATGTTTATCCAAGTTGGTGTTCAAGTTGTGAACAAAGTGGTGGGGAGACGTTCGCTAATTTAGGGAATAATCATGGGTTTGTAAGTAATGAATACATGTTCATTGGTCTGAGGCTTTTTGGGAAGCCTAAAGTAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTATGGAGAACTCTAGAGAAGGAGTCGAGCCTCATTAAGAGGAGACTGTTTGAGGGCTCCATAGGCCTCGGGGAAGGTTCTGGGAGAAGATTGTTAGGAGAGAGTCCCACGTGCGCTAATTTAGGAAATGATCATGGGGATTTGGCTAGCGGTCGGTTTGATCTTCAAGGATCTAAAATTTTAGAGCTCGAGAAGAAGTTGATGGGAAAAATAAAAGTATTAGTTAATTATGTATTGAAGAAGTTGTTTGTGTTTCCAAATAAGATCAAATTTGGTGTCCAAAGCTGTTAA MEQTLFPSPHALLILTIFFFFLSPSIADQACQKSCGDIPLRYPFGSDTGCGDPRFHPHITCNDHQQLTFTTHTGCYPISYIDYANQVLYITDPTMSTCSCNQPSKGFGLDWDAPFTFHGDTIFALLDCSSASPVYSPNGMFNDRNNSSRVALCDNRGLPICGFLYGCKPIVSLNIPISGCCVYTPVNFGPSFEMDLEKLKCGSYSGFYSFNGRESDADSWKYGIAIKYKFAIDNVYPSWCSSCEQSGGETFANLGNNHGFVSNEYMFIGLRLFGKPKVKPRELMLKVDNIIPLWRTLEKESSLIKRRLFEGSIGLGEGSGRRLLGESPTCANLGNDHGDLASGRFDLQGSKILELEKKLMGKIKVLVNYVLKKLFVFPNKIKFGVQSC Homology
BLAST of Carg21909 vs. NCBI nr
Match: KAG7030006.1 (hypothetical protein SDJN02_08352, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 821.6 bits (2121), Expect = 2.8e-234 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
BLAST of Carg21909 vs. NCBI nr
Match: KAG6599071.1 (hypothetical protein SDJN03_08849, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 545.0 bits (1403), Expect = 5.1e-151 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Carg21909 vs. NCBI nr
Match: XP_023546042.1 (wall-associated receptor kinase 5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 542.7 bits (1397), Expect = 2.5e-150 Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Carg21909 vs. NCBI nr
Match: XP_022946625.1 (wall-associated receptor kinase 5 [Cucurbita moschata]) HSP 1 Score: 542.3 bits (1396), Expect = 3.3e-150 Identity = 247/248 (99.60%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Carg21909 vs. NCBI nr
Match: XP_022999740.1 (wall-associated receptor kinase 5 [Cucurbita maxima]) HSP 1 Score: 528.1 bits (1359), Expect = 6.4e-146 Identity = 242/248 (97.58%), Postives = 244/248 (98.39%), Query Frame = 0
BLAST of Carg21909 vs. ExPASy Swiss-Prot
Match: Q9LMN7 (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.3e-05 Identity = 46/175 (26.29%), Postives = 78/175 (44.57%), Query Frame = 0
BLAST of Carg21909 vs. ExPASy TrEMBL
Match: A0A6J1G4F1 (wall-associated receptor kinase 5 OS=Cucurbita moschata OX=3662 GN=LOC111450633 PE=4 SV=1) HSP 1 Score: 542.3 bits (1396), Expect = 1.6e-150 Identity = 247/248 (99.60%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Carg21909 vs. ExPASy TrEMBL
Match: A0A6J1KGG3 (wall-associated receptor kinase 5 OS=Cucurbita maxima OX=3661 GN=LOC111493998 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 3.1e-146 Identity = 242/248 (97.58%), Postives = 244/248 (98.39%), Query Frame = 0
BLAST of Carg21909 vs. ExPASy TrEMBL
Match: A0A0A0KE11 (EGF-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G403590 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 8.2e-131 Identity = 227/294 (77.21%), Postives = 244/294 (82.99%), Query Frame = 0
BLAST of Carg21909 vs. ExPASy TrEMBL
Match: A0A5A7TPC7 (Putative RING-H2 finger protein ATL21C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold422G00040 PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 5.3e-130 Identity = 216/251 (86.06%), Postives = 230/251 (91.63%), Query Frame = 0
BLAST of Carg21909 vs. ExPASy TrEMBL
Match: W9R1J0 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021052 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 4.7e-94 Identity = 167/270 (61.85%), Postives = 204/270 (75.56%), Query Frame = 0
BLAST of Carg21909 vs. TAIR 10
Match: AT1G10380.1 (Putative membrane lipoprotein ) HSP 1 Score: 303.1 bits (775), Expect = 3.1e-82 Identity = 143/260 (55.00%), Postives = 181/260 (69.62%), Query Frame = 0
BLAST of Carg21909 vs. TAIR 10
Match: AT3G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 106.3 bits (264), Expect = 5.6e-23 Identity = 83/261 (31.80%), Postives = 112/261 (42.91%), Query Frame = 0
BLAST of Carg21909 vs. TAIR 10
Match: AT1G11915.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 1.8e-21 Identity = 64/232 (27.59%), Postives = 105/232 (45.26%), Query Frame = 0
BLAST of Carg21909 vs. TAIR 10
Match: AT5G50290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.4 bits (233), Expect = 2.2e-19 Identity = 74/245 (30.20%), Postives = 108/245 (44.08%), Query Frame = 0
BLAST of Carg21909 vs. TAIR 10
Match: AT1G21230.1 (wall associated kinase 5 ) HSP 1 Score: 51.6 bits (122), Expect = 1.6e-06 Identity = 46/175 (26.29%), Postives = 78/175 (44.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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