Carg21863 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21863
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NADH-ubiquinone oxidoreductase chain 5
Location	Carg_Chr05: 8546291 .. 8548566 (-)
RNA-Seq Expression	Carg21863
Synteny	Carg21863

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTCTCTCAATTCCATTTCTCAATTCCTCGTTCCATTCATCTGTGGCTGTGTTAAATTCCCCATTCTTCATCGTCGCCCTTCAGAGAAACCAACCTCTCGGGGCGCAGCCATGATTACTCGATCGAATCTGGTTGAACAGTTGAGAGAATACCAGATTCGATCCAAGCACGACTGGGCTTCCGCCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGGTATCTCCCATTCATTTCCTACTTCCTTGTTTTACCTACGGTTCTCGTTGTTACATGTTGATTCTTTAGATTCTCAATCTTGTGTGTTCGTTCTGTTTCCTTTTTATTGTTTGTGATCGATGAACGTGGCTTTTGCGTTCTTTAAAACTCTCAATTACAGGATTCGGATCATTGTAGATTTTCACAGACGGTGTCTCAAATTTGTTCTACTTTGTATGGGATGATTCAATTTGTTTTGTTTTTTTTGGTCAATGAACTTTGGCATTTGGCAAGATCGTATTATAATTATTGATTGCTTTTGTTCTGGGCATTAATCTTCGATAATCCCTGCGTTGATTAGAAAAGGAAAATAATGGTGATCGTGTGGAATTTGGTACTTGAAACGGGATTTTTGTAAATAAATGTCATGATGCATCATGTCATTCTGTGAGTCTCTTTAGCCGTAGCCTGGGAAATTTCTTGTACTTACAAGTTTAGCATCAAATCCTTAGATTATGAGTTTCAGTTGATAGAGTTCTGTTTGTTCATATCTCGCCTTGTTTGCTAATGGCATTGCACTCGAGGAAATTATGTTCGAAATTGTACCAAAGTTATCAGATTCTTGAAGAAAACCCACTTGTATTAATGTTTTAGCATCCAATTATGCATCTCTGGTGAGTGAAGTTCTAAGTTTCAAATCACACAATCTTGAGAATACGTTTTTCATGTTTATAATTGTTAATTTTTCTAGTGTCAATTGGGCGAAGAACTCTTGTATGTTCCTAGCACGATGTTTCTTCAATGTTATTTGTTTGTTTTAGGTTCTAAAGAATGTATGATAGTTAACAGGAACTATAGATGCATTCTTAGCTTGGAACTAGTTCATTATTGATCAAGAGCTGTCACTTAAACCAATCGACACATCTTTTGATCTTATGTACAACATATCCAAATAGATATCCGTAGGCTTGACTCGGTGCTACTGTCCATAACACATTCTTTATCGTGTTCGGTTTATGTATTCGATTTGCTCTCCTGATGGATCTTATGTACAACATATCCAATAGACATCCGTAGGCTTGACATGGTGCTATTGTTCATAACACATTCTTTATCGTTCGGTATATGTATTCGATTTGCTCTCCTGATAGATCTTATGTACAACATATTCAAATAGATATCTATAGGCTTGACACGGTGCTACTGTTCATAATACATTCTTTATCGTTTGGTACATGTATTCGATTTGCTCTCCTCATAGATCTTATGTACAACGTATCCAAATAGATATCTGTAGGCTTGACACGGTGCTCATTCATTATTGTTCGGTTTATGTATTTGATTTGCTCTCCTGATAGATCTTATGTACAACATATCCAAATAGATATTTGTAGGCTTGACACGGGGCTACTATCCATAACACATTCTTTACCGTTCGGGTTATGTATTTGATTTGCTCTCCTAATAGATCCTATGTACAACATATCCAAATAGATGTCTGTAGGCTTGACACGGGGCTACTATCCATAACACATTCTTTACCGTTCGGTTTATGTATTTGATTTGCTCTCCTGATAGATCCTATGTACAACATATCCAAATAGACATCCGTAGGCTTGACTCGGTGCTACTGTCCATAACACATTCTTTACCGTTCAGTTTATGTATTTGATTTGCTCCCCTGATAGATCCTATGTACAACATATCCAAATAGATATCCGTAGGCTTGACTCGGTGCCACTTTCCATACCACATTCTTTATCGTTCGGTTTATGAATTCAATCAGCTCTCCTGATAGCATGTAGATATCCAATATGGTATCACTTCTGATGTACATTTTGATTGTTGTATTCTTGATGCAGGGTGGATATAGTCATTTTTGTAATATGGGAACTCATAATTCTATCCTTCTTGGTGTTTTCGGCGGTTTCTTTATATTTTCGACATATGCAGTTGACTTTCGTTTTAGTATGCATAACGATGTTGTTGATTGTATGCATGAAAGTAACAAAGCAAATGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA

mRNA sequence

ATGCTCTCTCTCAATTCCATTTCTCAATTCCTCGTTCCATTCATCTGTGGCTGTGTTAAATTCCCCATTCTTCATCGTCGCCCTTCAGAGAAACCAACCTCTCGGGGCGCAGCCATGATTACTCGATCGAATCTGGTTGAACAGTTGAGAGAATACCAGATTCGATCCAAGCACGACTGGGCTTCCGCCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGGGTGGATATAGTCATTTTTGTAATATGGGAACTCATAATTCTATCCTTCTTGGTGTTTTCGGCGGTTTCTTTATATTTTCGACATATGCAGTTGACTTTCGTTTTAGTATGCATAACGATGTTGTTGATTGTATGCATGAAAGTAACAAAGCAAATGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA

Coding sequence (CDS)

ATGCTCTCTCTCAATTCCATTTCTCAATTCCTCGTTCCATTCATCTGTGGCTGTGTTAAATTCCCCATTCTTCATCGTCGCCCTTCAGAGAAACCAACCTCTCGGGGCGCAGCCATGATTACTCGATCGAATCTGGTTGAACAGTTGAGAGAATACCAGATTCGATCCAAGCACGACTGGGCTTCCGCCTCCTTCTTCTCCTCTACCTCTAATATTACATCCTCCAGGGTGGATATAGTCATTTTTGTAATATGGGAACTCATAATTCTATCCTTCTTGGTGTTTTCGGCGGTTTCTTTATATTTTCGACATATGCAGTTGACTTTCGTTTTAGTATGCATAACGATGTTGTTGATTGTATGCATGAAAGTAACAAAGCAAATGAGATTGGCTAGGAAGAAGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA

Protein sequence

MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM

Homology

[Close]

BLAST of Carg21863 vs. NCBI nr
Match: KAG6599112.1 (hypothetical protein SDJN03_08890, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030052.1 hypothetical protein SDJN02_08398, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 7.6e-68
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
           MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61  ASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV 120
           ASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV
Sbjct: 61  ASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV 120

Query: 121 CMKVTKQMRLARKKKRRMLLPLSM 145
           CMKVTKQMRLARKKKRRMLLPLSM
Sbjct: 121 CMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of Carg21863 vs. NCBI nr
Match: XP_022946845.1 (uncharacterized protein LOC111450786 [Cucurbita moschata])

HSP 1 Score: 266.9 bits (681), Expect = 9.9e-68
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
           MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61  ASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV 120
           ASASFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV
Sbjct: 61  ASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV 120

Query: 121 CMKVTKQMRLARKKKRRMLLPLSM 145
           CMKVTKQMRLARKKKRRMLLPLSM
Sbjct: 121 CMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of Carg21863 vs. NCBI nr
Match: XP_022999777.1 (uncharacterized protein LOC111494024 [Cucurbita maxima])

HSP 1 Score: 265.0 bits (676), Expect = 3.8e-67
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
           MLSLNSISQFLVPFICGCVKFPI HRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPIFHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61  ASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV 120
           ASASFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSLYFRHMQLTFVL+CITMLLIV
Sbjct: 61  ASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLICITMLLIV 120

Query: 121 CMKVTKQMRLARKKKRRMLLPLSM 145
           CMKVTKQMRLARKKKRRMLLPLSM
Sbjct: 121 CMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of Carg21863 vs. NCBI nr
Match: XP_038884232.1 (uncharacterized protein LOC120075129 [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 5.1e-56
Identity = 126/148 (85.14%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRGAAMITRSNLVEQLREYQIRS 60
           MLSLNSISQFLV F+C CVK  ILH RPS    +K  SRG+AMITRSNLVEQLREYQIRS
Sbjct: 1   MLSLNSISQFLVRFVCRCVKSSILHPRPSSLEAKKRKSRGSAMITRSNLVEQLREYQIRS 60

Query: 61  KHDWASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITM 120
           KH+WAS SFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSLYFRHMQL F+LVCITM
Sbjct: 61  KHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITM 120

Query: 121 LLIVCMKVTKQMRLARKKKRRMLLPLSM 145
           LL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 121 LLLLCMKVTKQVRLARKKKRRMLLPLSM 148

[Close]

BLAST of Carg21863 vs. NCBI nr
Match: XP_008464874.1 (PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 1.0e-51
Identity = 122/150 (81.33%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQI 60
           MLSLNSISQFLV F+C C +  ILH   S    +K  SRG  +AMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61  RSKHDWASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCI 120
           RSKH+WAS SFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSLYFRHMQL F+LVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 121 TMLLIVCMKVTKQMRLARKKKRRMLLPLSM 145
           TMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of Carg21863 vs. ExPASy TrEMBL
Match: A0A6J1G568 (uncharacterized protein LOC111450786 OS=Cucurbita moschata OX=3662 GN=LOC111450786 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.8e-68
Identity = 143/144 (99.31%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
           MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61  ASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV 120
           ASASFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV
Sbjct: 61  ASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV 120

Query: 121 CMKVTKQMRLARKKKRRMLLPLSM 145
           CMKVTKQMRLARKKKRRMLLPLSM
Sbjct: 121 CMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of Carg21863 vs. ExPASy TrEMBL
Match: A0A6J1KBR2 (uncharacterized protein LOC111494024 OS=Cucurbita maxima OX=3661 GN=LOC111494024 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60
           MLSLNSISQFLVPFICGCVKFPI HRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW
Sbjct: 1   MLSLNSISQFLVPFICGCVKFPIFHRRPSEKPTSRGAAMITRSNLVEQLREYQIRSKHDW 60

Query: 61  ASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITMLLIV 120
           ASASFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSLYFRHMQLTFVL+CITMLLIV
Sbjct: 61  ASASFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLICITMLLIV 120

Query: 121 CMKVTKQMRLARKKKRRMLLPLSM 145
           CMKVTKQMRLARKKKRRMLLPLSM
Sbjct: 121 CMKVTKQMRLARKKKRRMLLPLSM 144

[Close]

BLAST of Carg21863 vs. ExPASy TrEMBL
Match: A0A1S3CMK7 (uncharacterized protein LOC103502637 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502637 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 4.8e-52
Identity = 122/150 (81.33%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQI 60
           MLSLNSISQFLV F+C C +  ILH   S    +K  SRG  +AMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVRFLCRCFRSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61  RSKHDWASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCI 120
           RSKH+WAS SFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSLYFRHMQL F+LVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 121 TMLLIVCMKVTKQMRLARKKKRRMLLPLSM 145
           TMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of Carg21863 vs. ExPASy TrEMBL
Match: A0A0A0KIH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358690 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 8.2e-52
Identity = 122/150 (81.33%), Postives = 131/150 (87.33%), Query Frame = 0


Query: 1   MLSLNSISQFLVPFICGCVKFPILHRRPS----EKPTSRG--AAMITRSNLVEQLREYQI 60
           MLSLNSISQFLV F+C C    ILH   S    +K  SRG  +AMITRSNLVEQLREYQI
Sbjct: 1   MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQI 60

Query: 61  RSKHDWASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCI 120
           RSKH+WAS SFFSSTSNITSSRVD+VIFVIWELIILSFLVFSAVSLYFRHMQL F+LVCI
Sbjct: 61  RSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCI 120

Query: 121 TMLLIVCMKVTKQMRLARKKKRRMLLPLSM 145
           TMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 121 TMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150

[Close]

BLAST of Carg21863 vs. ExPASy TrEMBL
Match: A0A6J1GHS6 (uncharacterized protein LOC111454282 OS=Cucurbita moschata OX=3662 GN=LOC111454282 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 4.1e-51
Identity = 117/147 (79.59%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 2   LSLNSISQFLVPFICGCVKFPILHRRP----SEKPTSRGAAMITRSNLVEQLREYQIRSK 61
           LSLNSISQFL+ F+  C K   LHRRP    +++  SRGAAMITRSNLVEQLREYQIRSK
Sbjct: 20  LSLNSISQFLLHFVSHCFKSSDLHRRPTSPEAKETRSRGAAMITRSNLVEQLREYQIRSK 79

Query: 62  HDWASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAVSLYFRHMQLTFVLVCITML 121
           H+WAS S FSS SNITSSRVD+VIFVIWELIIL+FLVFSAVSLYFRHMQL  +LVCITML
Sbjct: 80  HEWASVSLFSSASNITSSRVDVVIFVIWELIILAFLVFSAVSLYFRHMQLASILVCITML 139

Query: 122 LIVCMKVTKQMRLARKKKRRMLLPLSM 145
           L++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 140 LLICMKVTKQVRLARKKKRRMLLPLSM 166

[Close]

BLAST of Carg21863 vs. TAIR 10
Match: AT1G20460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76185.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 167.9 bits (424), Expect = 5.8e-42
Identity = 87/106 (82.08%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 39  MITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAV 98
           MITRSNL EQLREYQIRSKHDWAS SFFSSTSN +SSRVD+V+FVIWEL+IL+F VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVILAFFVFSAV 60

Query: 99  SLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM 145
           SLYF+ +QL F+LVC+T+LL++CMKVTKQ+RLARKKKRRMLLPLSM
Sbjct: 61  SLYFKRLQLAFILVCVTLLLLICMKVTKQVRLARKKKRRMLLPLSM 106

[Close]

BLAST of Carg21863 vs. TAIR 10
Match: AT1G76185.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G20460.1); Has 37 Blast hits to 37 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 161.0 bits (406), Expect = 7.1e-40
Identity = 83/106 (78.30%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 39  MITRSNLVEQLREYQIRSKHDWASASFFSSTSNITSSRVDIVIFVIWELIILSFLVFSAV 98
           MITRSNL EQLREYQIRSKHDWAS SFFSSTSN +SSRVD+V+FVIWEL++L+ +VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVMLALVVFSAV 60

Query: 99  SLYFRHMQLTFVLVCITMLLIVCMKVTKQMRLARKKKRRMLLPLSM 145
           SLYFR +QL F+L+C+T+LL++CMK+TKQ+R ARKKKRRMLLPLSM
Sbjct: 61  SLYFRRLQLAFILLCVTLLLLLCMKITKQVRHARKKKRRMLLPLSM 106

The following BLAST results are available for this feature:

BLAST of Carg21863 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599112.1	7.6e-68	100.00	hypothetical protein SDJN03_08890, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022946845.1	9.9e-68	99.31	uncharacterized protein LOC111450786 [Cucurbita moschata]	[more]
XP_022999777.1	3.8e-67	97.92	uncharacterized protein LOC111494024 [Cucurbita maxima]	[more]
XP_038884232.1	5.1e-56	85.14	uncharacterized protein LOC120075129 [Benincasa hispida]	[more]
XP_008464874.1	1.0e-51	81.33	PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]	[more]

BLAST of Carg21863 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21863 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G568	4.8e-68	99.31	uncharacterized protein LOC111450786 OS=Cucurbita moschata OX=3662 GN=LOC1114507...	[more]
A0A6J1KBR2	1.8e-67	97.92	uncharacterized protein LOC111494024 OS=Cucurbita maxima OX=3661 GN=LOC111494024...	[more]
A0A1S3CMK7	4.8e-52	81.33	uncharacterized protein LOC103502637 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KIH9	8.2e-52	81.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358690 PE=4 SV=1	[more]
A0A6J1GHS6	4.1e-51	79.59	uncharacterized protein LOC111454282 OS=Cucurbita moschata OX=3662 GN=LOC1114542...	[more]

BLAST of Carg21863 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20460.1	5.8e-42	82.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G76185.1	7.1e-40	78.30	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34936:SF7	PROTEIN, PUTATIVE-RELATED	coord: 39..144
None	No IPR available	PANTHER	PTHR34936	EXPRESSED PROTEIN	coord: 39..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21863-RA	Carg21863-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane