Carg21816 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAAGCAACCTGTTCGGATGAAGGCTGTGATCTATGCTTTATCGCCGTTCCAGCAGAAGACCATGTCAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCACCCTTCTAATCACCCCCGTCGTCGGAACCTACACGTAATTTTTTCATCTCCTTTTTCCTTTCCTTAATTTCATATCTTTTGAAATTTCGATTTTAGGGTTTGCCCGTTGAATGCTTTCCTCCCTTCATATTTCAATATGTTATCAATTTTTTTTCTTCTTAAAATCAAGTCTTCATTTGTTTCTCGACGAGCTCGGTAGTTCGCCTTTTGATAACACTTGGTTGGGTCCAGTCTAGGTGAGAAATCTATTAATCAGATTCAAAGAGGAAACAATTCCGTCGTAGAATTCTATTAATGATTTGGTCTTTTTTTTTCTTTTTTATAGACTTAGCCTTAAGATCTAAAATGTTAAATATTTTCCTCAAAGCAATCAAATTTTTACTGGAACTGAACACCAGATTGCATCTTATTGCGCATTCAGATTGATTTGTTTTTTTATCCGTGGGAATGGAATAGGAACATCTATGTTTTTATTTTTATATCTATTTCTTTTTGGAGCGATCTCGTGATAATGTTATTGTCCTCAACTGCAAGTTTTCATTTCTGTTTCCGATTTTGTTATCAGTAGGCGTTGCCGCACTTGATTGATACTGTTCCTAGTTCATGTCAATCAGATTTGTAGTCACTCTTCCCCCGTCTGTGTATAGTTTTATTAACCTTTAAATACTTTGGTCTGTTTTAAATTCACGCACTCTACGATCAAAGAGCAAAATTAGTTCTATAGTGTATAGGGTAGAGCTATTAGCTTTTGGATATATTATAGAATAGAGATTAAGAGTTATCATCCCCACATGCAAGATTGAGGAATTGGATCCGGGCAAGAGGTTTAGAAATCAATCTAAAACTCATTTTGGATGATAACACGATGACTAATTCATGCTTTATATTACTTGTGTGAGACGAAAAAAAATGACATCTTTGTAGCAGAATGATGAAATTAGCATTACCATGCATGAGGAAACGTTGTATTCTTCAAGTATTTTGAGCTCTAGATGGGATGGTTTGATAGCCATTTTTTTGGTTATAACTAAAATTTCCATTTTGCCTAAAGATGTATTATGCAGTCTTGGCGTCAGACGAGACCAAATTATGGATGGGTCTCGAGTTTTTGTTAACTTCGATTGAAGTATCGTTTGCATATACATGTATATGATAAATGACTTGAATTAGTTAATTGATCGGTGAAAAGTGCCTCCATGTTTGTTGATGAACATGTGGATGTATATGATTCAGTCGTAAACTTGTTATTTTACTCTCTGGATGCAGGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGTACTGAAAGCGCCTGGACCTTGAAGAAGTCAAAATGGAGCTCTGATTTCTTAGGCTATGAGGATGTGCTTTTATTTTGAGGAACATTTTCTCACTTGTTTGTTGGAATAAATTACTACATTTTTTTTTTTTTGTCGATCTGTGTTACACGCATTGGAATGATGCGAACTGATGCGTAATCGCCACCCTCTGCAGACTTCTCAATACCAACCAAACTTTTAAGACTCTGATTAGATTCCATGATATCAAAGTATCAACCTTTTTTTTCCCTCC ATGGGGAAGCAACCTGTTCGGATGAAGGCTGTGATCTATGCTTTATCGCCGTTCCAGCAGAAGACCATGTCAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCACCCTTCTAATCACCCCCGTCGTCGGAACCTACACGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGTACTGAAAGCGCCTGGACCTTGAAGAAGTCAAAATGGAGCTCTGATTTCTTAGGCTATGAGGATGTGCTTTTATTTTGAGGAACATTTTCTCACTTGTTTGTTGGAATAAATTACTACATTTTTTTTTTTTTGTCGATCTGTGTTACACGCATTGGAATGATGCGAACTGATGCGTAATCGCCACCCTCTGCAGACTTCTCAATACCAACCAAACTTTTAAGACTCTGATTAGATTCCATGATATCAAAGTATCAACCTTTTTTTTCCCTCC ATGGGGAAGCAACCTGTTCGGATGAAGGCTGTGATCTATGCTTTATCGCCGTTCCAGCAGAAGACCATGTCAGGGTTATGGAACGACTTGACCGGCAAGATTCACCATAAGATCTCCGAGAACTGGATCAGTGCCACCCTTCTAATCACCCCCGTCGTCGGAACCTACACGTACGCACAGCAGTACAAGGAGAATGAAAAGTTGTCTCACAGGTACTGA MGKQPVRMKAVIYALSPFQQKTMSGLWNDLTGKIHHKISENWISATLLITPVVGTYTYAQQYKENEKLSHRY Homology
BLAST of Carg21816 vs. NCBI nr
Match: XP_022961649.1 (cytochrome b-c1 complex subunit 8-like [Cucurbita moschata] >XP_022997627.1 cytochrome b-c1 complex subunit 8-like [Cucurbita maxima] >XP_023545652.1 cytochrome b-c1 complex subunit 8-like [Cucurbita pepo subsp. pepo] >KAG6598219.1 Cytochrome b-c1 complex subunit 8-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029201.1 hypothetical protein SDJN02_07538, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Carg21816 vs. NCBI nr
Match: XP_022951208.1 (cytochrome b-c1 complex subunit 8-like [Cucurbita moschata] >XP_023002778.1 cytochrome b-c1 complex subunit 8-like [Cucurbita maxima] >XP_023537368.1 cytochrome b-c1 complex subunit 8-like [Cucurbita pepo subsp. pepo] >KAG6585163.1 Cytochrome b-c1 complex subunit 8-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020083.1 hypothetical protein SDJN02_16765 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 149.1 bits (375), Expect = 1.5e-32 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Carg21816 vs. NCBI nr
Match: XP_038886592.1 (cytochrome b-c1 complex subunit 8-like [Benincasa hispida]) HSP 1 Score: 144.8 bits (364), Expect = 2.8e-31 Identity = 68/72 (94.44%), Postives = 69/72 (95.83%), Query Frame = 0
BLAST of Carg21816 vs. NCBI nr
Match: XP_022131282.1 (cytochrome b-c1 complex subunit 8-like [Momordica charantia]) HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 0
BLAST of Carg21816 vs. NCBI nr
Match: XP_008444338.1 (PREDICTED: cytochrome b-c1 complex subunit 8-like [Cucumis melo] >KAA0061082.1 cytochrome b-c1 complex subunit 8-like [Cucumis melo var. makuwa]) HSP 1 Score: 141.4 bits (355), Expect = 3.1e-30 Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of Carg21816 vs. ExPASy Swiss-Prot
Match: Q9SG91 (Cytochrome b-c1 complex subunit 8-1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UCRQ-1 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.8e-28 Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Carg21816 vs. ExPASy Swiss-Prot
Match: P46269 (Cytochrome b-c1 complex subunit 8 OS=Solanum tuberosum OX=4113 PE=1 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 2.6e-27 Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 0
BLAST of Carg21816 vs. ExPASy Swiss-Prot
Match: Q9FLB7 (Cytochrome b-c1 complex subunit 8-2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=UCRQ-2 PE=1 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 4.4e-27 Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 0
BLAST of Carg21816 vs. ExPASy TrEMBL
Match: A0A6J1K5M6 (cytochrome b-c1 complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111492502 PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.6e-34 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Carg21816 vs. ExPASy TrEMBL
Match: A0A6J1HEN4 (cytochrome b-c1 complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC111462357 PE=3 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.6e-34 Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
BLAST of Carg21816 vs. ExPASy TrEMBL
Match: A0A6J1KUK4 (cytochrome b-c1 complex subunit 8-like OS=Cucurbita maxima OX=3661 GN=LOC111496537 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 7.3e-33 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Carg21816 vs. ExPASy TrEMBL
Match: A0A6J1GH36 (cytochrome b-c1 complex subunit 8-like OS=Cucurbita moschata OX=3662 GN=LOC111454117 PE=3 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 7.3e-33 Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0
BLAST of Carg21816 vs. ExPASy TrEMBL
Match: A0A6J1BQK7 (cytochrome b-c1 complex subunit 8-like OS=Momordica charantia OX=3673 GN=LOC111004551 PE=3 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.2e-31 Identity = 65/72 (90.28%), Postives = 69/72 (95.83%), Query Frame = 0
BLAST of Carg21816 vs. TAIR 10
Match: AT3G10860.1 (Cytochrome b-c1 complex, subunit 8 protein ) HSP 1 Score: 125.9 bits (315), Expect = 1.3e-29 Identity = 56/72 (77.78%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Carg21816 vs. TAIR 10
Match: AT5G05370.1 (Cytochrome b-c1 complex, subunit 8 protein ) HSP 1 Score: 121.3 bits (303), Expect = 3.1e-28 Identity = 53/72 (73.61%), Postives = 62/72 (86.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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