Carg21811 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg21811
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionThioredoxin-like fold
LocationCarg_Chr05: 50531 .. 54872 (+)
RNA-Seq ExpressionCarg21811
SyntenyCarg21811
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTTTCCTCTCGGTCCCTCTCTCGCCTCTCAGAGTCACAAGTGGGTTTCTTATCGCGCCAAATCCTCCATCCAGAAGCTCGCCTCGAAATATTGTCTCACGGCCACTCGCCATAACCATAGTTCCAGCAAACCTTCCCACTGCACGTCCTTGTGTAATTCCGTGATTGAAGGTTGATAGTTATCCTTTTTTCCCATTTTAATTTTATGGTTTGTCGGCTTCTATAGTTTAATTTGGATGTGTGCTTTAGTTTGTTTGTTTTCCTCTACTTTTCATACTCTGCTAATGGTTTGATCTGCGAGATTTCACCAGTGATAAATGCATTTATGTTGATATTTGTAGGACACTGAGAAGTTGATTGTTTGCACGATTTGATCAGATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAGTATGTGATGTTGTTGTTGTTATCTTTTTTCGGGGCAAGGAATTGGGAAGTCTGACCCCTGATATCAGCAATATGATTGAATAAGCACTCTGTGGACTTTGCAGCTCTTCATTTTTGCTCTTTTAGCAGTAGTTGTTTCTATGATTATGACACGCGAAATTTACTTCCTACTAGAATGGATGTGACCCCATTTTCATCTGCATCCAATCAATTCCTTCAAATAATCTATTTTCACTCCACTGTTGATCTCTTCCTTGATCATCTTGCTGTTATGCTTTCTATGCGGCGGCACCATGTTACTAACCTGCCATTTTCCGCCCAGGCAATCCATCTCATTGTGATTGCTCAAGCTGATAGTTTACCTTAAATTTAATTGTATCAATACTTCAACACTCTCCCTTCCTTGCTTGTGAGCTCGAAAAATTGTAAAAAACTCAACAAGTGGAAATTGATATTAATTGGGGTGAAAATAAGATTACAAAGGTTTGAATACATGACCTCTTGCTCTGAAATCATGTTAAATCACCAATAAACCCAAAAGCTTAAGCGGATAGGTTGTGGTAAATTTACTAATATCAATAACTCAACTGTCATAAGAACAATTTCTAGTTGCCTTCAAACATCTAATCCACCTCTCATCTGATGTTGTGAACTAACCTCATATCCATCTAGGCAGAGGAAAATGGAAAGAGGGGCCCTTTTAGTTCTCCTTAGATTAAAATGAAACTGTTAACATTTTGGGTTTCCACCCCTTCCGAACCCTCTAATCCAGGAAAGTCTTATATTTATTTTGGGTTCCCCTTAACAATCACTTTATTATATTTGAGAAGTTGAACTATGAGTTACTCTCTCTCTTATATTTATTTATGTTAAGCTTGGATCATTTCATCTATTAGTTTCTGTTGTTGGATGAGGATATTTGGAGTTCCATGTCCATGTTCCATGAAGATAAGCATTTTTGTTCATTTTAGGCAAGAGCCGATTTTCTGAGTTGTATTTAGCATTATAATGGCCAAAGGTACATGATTAGGATAAACTTTTCTTCCAGACTGCATTCTACTTTTGTGAGATACGACTCTTTGTAGTCTGTTTTTTTTTTTCTTCACAATTTTGCTTATTCCACATCCCTCTACTTGTTATAGATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGGTACATGAATACTGTTCGTATTAGCACCTTCCTTTTGTTCTCTAGGTTAAATGCTCATGTTTAATTCTATAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGTAAGTCATTTTCTTATGATAGGAGTACCCGACGTGCCATGATTTATTGACGTTTTTCTTTTCTTATCTTTTAACAGCTTCATTTCTTCTGAAGTCTAACTGAGTTATAGAACTTTTACAATGGTTTGTTTGATTTATTTTTATTTTTCTTATTATTTAATCACATTTGTCATCCTTTGCATCATTTTTTTTGCCGCCTATTTATTTTACTTTATTTCAGAGATTAAAATAGTAATAAAAAAACATTGCATTCTGTTTTTATTGACTTACATGTCTCTTGAGCATGCTTATATGTCTGGGGGTACGTCTCAAACTCCGCTTCCTCTAATTGATGCCCCATCTGTATTGAAATGTTTCTGCCTTTTGGGGTTATTAATTTTTATTTTTTTTTTAAATGTTATTCGAAAATATATAGAATGACTTGTTAATGTTAATCTTATTGTGCATATTGAAATCACCATGCACAAATTTATGATTTCTCATTACAAGATATCCATATAACTTCCTTGATCTTCTTTAAGCCGTTTTCTTATGTTTCTTGTCATTTTTTTTATGAAAATGTTCCTTGAGCCGTTTTCTTAATTTCATTGTAACGGTCATTTTATCATTGTGCCTCTGTGATCCATGGATTTAGTCAATAGTTCGAAACAATAGACAACATCATAATATGCCACTGCATTTTTTGTGTTTACTTTCTTGTGACTTCGATCTCATGTTTAAACTTCAGGTTGAGTGCCCAAAGTATCCTGGTTTCTGCATTTCACGGCAGAGAAAGGAATATCCATTTATCGAGATGTTTCATAGCCCACAACAAGTAGGACTGCCCATCTGATTGTGTTTTGTCTTAGTTTGATTTCCAGTGTAACCGTATATGATTTTGTTTCCAATTCTTGATTAATGGGAAAATAAGCTCTTTCTTGAATAGTGTTGTGCTTACTTTTGTCAATGCTGTATACAATTTATCTTGAACTTTAGTTGGCCATAAAATGTGATAATGCATTTTTTTTTAATATAAAACAGACAGAAGCAAATTCGTATTGACAAAAGATAACAGCTTAAGGGAAAGGGCTAAAATTTGATAATGTAGGCGATCATTTTTCTTCTTTGCCTTGATGGTTGATTTATGATTTTTTTGCATTTTGTTGTCTGAATGATCAAAGAAACGTTTTTGTTTGTTTGTTTGTTTTTAGTAAAAATACTGAAGTAATTCGTGCTGCGATGGTGGCTTCTAGCTCTGTGGTCTATATAGAACTTTCTTCACATGTTTGTATCCAGAACAAGTGGCTTTAATCCAACATTATTGTGCTTGCATTTCATTTCTTGCAAGCACAGCTGAACCAACAGATAAAGGAACCATTAATGAACATTGCTGCTTTAATGCTCAAGAAAATATTGACTATTTTTTTTATTTAGAAGATGGATTTGTTCCATTTTACGTTGTTTTTACATTTAGAAACATTGTATTGTAAACAACAAGCTGATGGGAGATACGGTCTTAAATGGAAGCTAGGCAAACTCTATCAATACTGCCGTAAAATAGTACTTATCTATATGCTAAAAGAAAATGTCTATACCTTACCGTTTTCATTCTCAGTCCATTTATTAATGATTTGAATTCAATATTTTTTGTGCAGGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCGTAAGTTTTCATGCTCTGTTAACCTAAGCATACTCAATTTATCAATTCATTTCTCATTGCTGATGCTTTCACGTATGGTCATTGTCCTTTTTCCACAGCATCTCCCCTTCTTACATCCCATCCCAGCAACACTAAAAGAAGTTTATGTAACGAACTTAACATTTGATTTGGATGTCCTGTTTTTTCACCTGATTTTATTAACATTATTTACCATTGAACATATGGTATTTTAAAATGATTGGCTGGCTTTTAACCCAAATAAGGCCTAATGAAGTTTTCTCTGCTGGAAAATATTGAAGTTCTCAATTCCGCAAGCTAAGCTTCTAATAATAAATGGGATCCTTCACTGACCTATGTTTCTGTTTCATTGATTTGTTTATTTTCTTTTATCCAGTTCAACTATGACCCCAGTGCCTACGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGGTCGCTGAAGCAAAAGTAATACACGGTCAAGAGCGCAAAGCCTTTGTAACTTATCTGTGATTTTGAACTGGTTTGTGCTGTACATGATGGATACAAACTCCATAGATGTTTAATCTTTATGCCCACATGAAAAGTAGACTCATACAAGATACTTCCTGGTTTTTTGCCAGTCAGGTTACATTCAGTATTTTTTTTTCCCTTTCTTTTTGGATCGTCTTTTTTCCAACATTTGTATTACCTCACTTAATTTAGCAAAAATAGCTAGCGCGTTGTAGCTCCCTTAAGCATATAGTATTGTGGTATCCGAAATCTTATCATTGCAAACTTTGAAGTTGGCTACA

mRNA sequence

TCTTTTTCCTCTCGGTCCCTCTCTCGCCTCTCAGAGTCACAAGTGGGTTTCTTATCGCGCCAAATCCTCCATCCAGAAGCTCGCCTCGAAATATTGTCTCACGGCCACTCGCCATAACCATAGTTCCAGCAAACCTTCCCACTGCACGTCCTTGTGTAATTCCGTGATTGAAGGACACTGAGAAGTTGATTGTTTGCACGATTTGATCAGATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGTTGAGTGCCCAAAGTATCCTGGTTTCTGCATTTCACGGCAGAGAAAGGAATATCCATTTATCGAGATGTTTCATAGCCCACAACAAGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCTTCAACTATGACCCCAGTGCCTACGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGGTCGCTGAAGCAAAAGTAATACACGGTCAAGAGCGCAAAGCCTTTGTAACTTATCTGTGATTTTGAACTGGTTTGTGCTGTACATGATGGATACAAACTCCATAGATGTTTAATCTTTATGCCCACATGAAAAGTAGACTCATACAAGATACTTCCTGGTTTTTTGCCAGTCAGGTTACATTCAGTATTTTTTTTTCCCTTTCTTTTTGGATCGTCTTTTTTCCAACATTTGTATTACCTCACTTAATTTAGCAAAAATAGCTAGCGCGTTGTAGCTCCCTTAAGCATATAGTATTGTGGTATCCGAAATCTTATCATTGCAAACTTTGAAGTTGGCTACA

Coding sequence (CDS)

ATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGTTGAGTGCCCAAAGTATCCTGGTTTCTGCATTTCACGGCAGAGAAAGGAATATCCATTTATCGAGATGTTTCATAGCCCACAACAAGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCTTCAACTATGACCCCAGTGCCTACGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGGTCGCTGA

Protein sequence

MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRGNYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGKISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Homology
[Close]
BLAST of Carg21811 vs. NCBI nr
Match: XP_022996547.1 (uncharacterized protein LOC111491762 [Cucurbita maxima] >XP_023545217.1 uncharacterized protein LOC111804696 [Cucurbita pepo subsp. pepo] >KAG7029196.1 hypothetical protein SDJN02_07533 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.9 bits (860), Expect = 1.9e-88
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 158
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Carg21811 vs. NCBI nr
Match: KAG6598213.1 (Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331.6 bits (849), Expect = 3.6e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 156
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155

[Close]
BLAST of Carg21811 vs. NCBI nr
Match: XP_022962537.1 (uncharacterized protein LOC111462937 [Cucurbita moschata])

HSP 1 Score: 330.5 bits (846), Expect = 8.0e-87
Identity = 154/157 (98.09%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP  LDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPKFLDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSP+QASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 158
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Carg21811 vs. NCBI nr
Match: XP_038885436.1 (uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885437.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885438.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885439.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885440.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida])

HSP 1 Score: 321.2 bits (822), Expect = 4.8e-84
Identity = 147/157 (93.63%), Postives = 153/157 (97.45%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPT+LDR+L HLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTVLDRILSHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYP +KFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQAS+QGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNIKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASNQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 158
           +SD N+TKYSVKVLPFNYDPSAYG REFFKRHGIYGR
Sbjct: 121 MSDSNVTKYSVKVLPFNYDPSAYGLREFFKRHGIYGR 157

[Close]
BLAST of Carg21811 vs. NCBI nr
Match: XP_022132238.1 (uncharacterized protein LOC111005143 [Momordica charantia] >XP_022132239.1 uncharacterized protein LOC111005143 [Momordica charantia])

HSP 1 Score: 312.4 bits (799), Expect = 2.2e-81
Identity = 144/155 (92.90%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MG+PTI DRM+ HLRATCKYYTG+PKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGEPTIFDRMISHLRATCKYYTGYPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYP VKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQAS+QGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASNQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 156
           I+DP+ITKYSVKVLPFNYD SAYGFREFFKRHGI+
Sbjct: 121 IADPSITKYSVKVLPFNYDLSAYGFREFFKRHGIW 155

[Close]
BLAST of Carg21811 vs. ExPASy TrEMBL
Match: A0A6J1K286 (uncharacterized protein LOC111491762 OS=Cucurbita maxima OX=3661 GN=LOC111491762 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 9.2e-89
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 158
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Carg21811 vs. ExPASy TrEMBL
Match: A0A6J1HCY2 (uncharacterized protein LOC111462937 OS=Cucurbita moschata OX=3662 GN=LOC111462937 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 3.9e-87
Identity = 154/157 (98.09%), Postives = 155/157 (98.73%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP  LDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPKFLDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSP+QASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 158
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Carg21811 vs. ExPASy TrEMBL
Match: A0A6J1BSI0 (uncharacterized protein LOC111005143 OS=Momordica charantia OX=3673 GN=LOC111005143 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81
Identity = 144/155 (92.90%), Postives = 151/155 (97.42%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MG+PTI DRM+ HLRATCKYYTG+PKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGEPTIFDRMISHLRATCKYYTGYPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAAVEFYP VKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQAS+QGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASNQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 156
           I+DP+ITKYSVKVLPFNYD SAYGFREFFKRHGI+
Sbjct: 121 IADPSITKYSVKVLPFNYDLSAYGFREFFKRHGIW 155

[Close]
BLAST of Carg21811 vs. ExPASy TrEMBL
Match: A0A1S3BIH6 (uncharacterized protein LOC103489940 OS=Cucumis melo OX=3656 GN=LOC103489940 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 142/157 (90.45%), Postives = 151/157 (96.18%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPT+LD +L HLR+TCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFT+R 
Sbjct: 1   MGDPTVLDTILRHLRSTCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTIRS 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NY+KHLDKVLEEAAVEFYP VKFMRVECPKYPGFCISRQRKEYPFIEMFHSP+QASSQGK
Sbjct: 61  NYSKHLDKVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 158
           I+D N+TKYSVKV+PFNYD SAYGFREFFKRHGIYGR
Sbjct: 121 IADSNVTKYSVKVIPFNYDTSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Carg21811 vs. ExPASy TrEMBL
Match: A0A2I4HB13 (uncharacterized protein LOC109015033 OS=Juglans regia OX=51240 GN=LOC109015033 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 6.2e-77
Identity = 132/154 (85.71%), Postives = 145/154 (94.16%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP+  DRM+  LR TCKYYTG+PKDLGPSRVIHFTSEREFVQLLHEG+PVVVAFT+RG
Sbjct: 1   MGDPSFFDRMICDLRTTCKYYTGYPKDLGPSRVIHFTSEREFVQLLHEGHPVVVAFTIRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYTKHLDKVLEEAA +FYP VKFMRVECPKYPGFCI+RQR EYPFIE+FHSP+QAS+QG+
Sbjct: 61  NYTKHLDKVLEEAAAKFYPNVKFMRVECPKYPGFCITRQRTEYPFIEIFHSPEQASNQGR 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGI 155
            +DPN+TKYSVKVLPFNYDPSAYGFREFFKRHGI
Sbjct: 121 AADPNVTKYSVKVLPFNYDPSAYGFREFFKRHGI 154

[Close]
BLAST of Carg21811 vs. TAIR 10
Match: AT5G57230.1 (Thioredoxin superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 2.6e-75
Identity = 120/154 (77.92%), Postives = 141/154 (91.56%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGD T LDRML+ LR+TCKYY+G+PKDLGPSRV+HFTSEREFVQLLH+GYPVVVAFT+R 
Sbjct: 1   MGDSTFLDRMLLQLRSTCKYYSGYPKDLGPSRVLHFTSEREFVQLLHQGYPVVVAFTIRS 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120
           NYT+HLD++LEEAA EFYP +KFMRVECPKYPGFCI+RQ+ EYPFIE+FHSPQ A ++GK
Sbjct: 61  NYTQHLDRMLEEAAAEFYPNIKFMRVECPKYPGFCITRQKNEYPFIEIFHSPQHAGNEGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGI 155
           + DPNIT+YSVKV+P+NYD S YGFREFFKR G+
Sbjct: 121 VQDPNITRYSVKVVPYNYDMSPYGFREFFKRQGV 154

The following BLAST results are available for this feature:
BLAST of Carg21811 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022996547.11.9e-88100.00uncharacterized protein LOC111491762 [Cucurbita maxima] >XP_023545217.1 uncharac... [more]
KAG6598213.13.6e-87100.00Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosper... [more]
XP_022962537.18.0e-8798.09uncharacterized protein LOC111462937 [Cucurbita moschata][more]
XP_038885436.14.8e-8493.63uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_03888543... [more]
XP_022132238.12.2e-8192.90uncharacterized protein LOC111005143 [Momordica charantia] >XP_022132239.1 uncha... [more]
BLAST of Carg21811 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg21811 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K2869.2e-89100.00uncharacterized protein LOC111491762 OS=Cucurbita maxima OX=3661 GN=LOC111491762... [more]
A0A6J1HCY23.9e-8798.09uncharacterized protein LOC111462937 OS=Cucurbita moschata OX=3662 GN=LOC1114629... [more]
A0A6J1BSI01.1e-8192.90uncharacterized protein LOC111005143 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A1S3BIH61.9e-8190.45uncharacterized protein LOC103489940 OS=Cucumis melo OX=3656 GN=LOC103489940 PE=... [more]
A0A2I4HB136.2e-7785.71uncharacterized protein LOC109015033 OS=Juglans regia OX=51240 GN=LOC109015033 P... [more]
BLAST of Carg21811 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G57230.12.6e-7577.92Thioredoxin superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 32..133
e-value: 6.2E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR36076THIOREDOXIN SUPERFAMILY PROTEINcoord: 1..154
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 31..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21811-RACarg21811-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity