Carg21782 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21782
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor bHLH139-like
Location	Carg_Chr09: 1316589 .. 1317950 (+)
RNA-Seq Expression	Carg21782
Synteny	Carg21782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACGCACACAAACTAATTCTCTACCTGGGACAATCTTGGATGGATTCTTTTGCAGGTCTCATCGGGGAAGGGGAATGGGATTTGTGCAGCTCAATTTTATCTATGGAGGAGCTTGATTTCACGCCGCTTATTCCTCCGCCCACGGCGGAGATGCCCGATTGGGTCTGTCATTTGGATTCTTTCACGCCCAATTTGCCTTCTTGTGGCAATGCTATCGATCAATTCCCCTGTATTGCTGCTGCTGATCATTATATGTCCATGTCTAATGCTGCCATTGAAGAGAACAAGATGGACTCCATTTTCTCAGCCTGTACTGACGTTTTGCTGCAAGAGATCTCTGTTTTTTCGGGTGAAGATAGATATCTAAACATGGATGTTCAAACCCAGATAGGGAATGATCATAATGCTACCAATTCTGCTAAGGCATTCCATCACAAAAGGAAATCCATTGTCGTCGCTGATGATGATGATCATCATCACAATAAGCTCAACAACCCTACTAAGAAAATTCGTACTTCAAACAATGTAAGTGAATGAATTTATTTAATGGGTGTTTTAAGTAATTAAATTGAGCATGACTTATCAAGCTTTTGGTCCAGAAAATTAGGAAAGCTACACAGAATAGCAATAAAAAATTGAGCACTCGGCGGCGCAAATGTGAAGAGGATCAGGAATCTGGAGGGCCTGATATGAACAGCTGCAGTAGCGCTAACTCATCAGAGGATGACAGCGCTTCACAAGATACTAATGGTGGTGGCGCTGTTTTAGAGGGCGAGGCATCGCCGCCAAAAGCCAAAACCAGAGCCACCAGAGGCTCTGCTACTGATCCACAAAGCCTTTATGCAAGGGTATGAAAGAAAAACACAGAGACCTTTATAATGACATGAAACTTGAAGCACTAACCTTAAACTTTGGTCTGGTTTTGTTAACCAAATGCAGAAGAGAAGAGAGAGAATCAATGAGCGGCTTAGAATTCTGCAGAAACTTGTCCCTAATGGAACAAAGGTAATAACCAAGTTATACGTATAATTTTGGAATGAGTTAATGAATTAGTTGAAGGCTTCAATGTAATATTGGACAATGTTTTCAGGTTGACATCAGCACAATGCTTGAGGAAGCAGTTCATTACGTGAAATTTCTGCAGCTTCAGATAAAGGTATGGACTTCAATTTGTTCATTAAGTTGGGTTCTGAATGATTTGATTTCAAATGCATTGGTCATGATTTCGTTTTATTTGCAGCTTTTGAGCTCTGATGAGATGTGGATGTATGCTCCAATTGCTTACAATGGGATGGATATTGGTCTGCACCAGAAGCTTCCTTCTTTTTTGTGACGAAACCAAAATTAATTGACCCTTTTGT

mRNA sequence

CAACGCACACAAACTAATTCTCTACCTGGGACAATCTTGGATGGATTCTTTTGCAGGTCTCATCGGGGAAGGGGAATGGGATTTGTGCAGCTCAATTTTATCTATGGAGGAGCTTGATTTCACGCCGCTTATTCCTCCGCCCACGGCGGAGATGCCCGATTGGGTCTGTCATTTGGATTCTTTCACGCCCAATTTGCCTTCTTGTGGCAATGCTATCGATCAATTCCCCTGTATTGCTGCTGCTGATCATTATATGTCCATGTCTAATGCTGCCATTGAAGAGAACAAGATGGACTCCATTTTCTCAGCCTGTACTGACGTTTTGCTGCAAGAGATCTCTGTTTTTTCGGGTGAAGATAGATATCTAAACATGGATGTTCAAACCCAGATAGGGAATGATCATAATGCTACCAATTCTGCTAAGGCATTCCATCACAAAAGGAAATCCATTGTCGTCGCTGATGATGATGATCATCATCACAATAAGCTCAACAACCCTACTAAGAAAATTCGTACTTCAAACAATAAAATTAGGAAAGCTACACAGAATAGCAATAAAAAATTGAGCACTCGGCGGCGCAAATGTGAAGAGGATCAGGAATCTGGAGGGCCTGATATGAACAGCTGCAGTAGCGCTAACTCATCAGAGGATGACAGCGCTTCACAAGATACTAATGGTGGTGGCGCTGTTTTAGAGGGCGAGGCATCGCCGCCAAAAGCCAAAACCAGAGCCACCAGAGGCTCTGCTACTGATCCACAAAGCCTTTATGCAAGGAAGAGAAGAGAGAGAATCAATGAGCGGCTTAGAATTCTGCAGAAACTTGTCCCTAATGGAACAAAGGTTGACATCAGCACAATGCTTGAGGAAGCAGTTCATTACGTGAAATTTCTGCAGCTTCAGATAAAGGTATGGACTTCAATTTGTTCATTAAGTTGGGTTCTGAATGATTTGATTTCAAATGCATTGGTCATGATTTCGTTTTATTTGCAGCTTTTGAGCTCTGATGAGATGTGGATGTATGCTCCAATTGCTTACAATGGGATGGATATTGGTCTGCACCAGAAGCTTCCTTCTTTTTTGTGACGAAACCAAAATTAATTGACCCTTTTGT

Coding sequence (CDS)

ATGGATTCTTTTGCAGGTCTCATCGGGGAAGGGGAATGGGATTTGTGCAGCTCAATTTTATCTATGGAGGAGCTTGATTTCACGCCGCTTATTCCTCCGCCCACGGCGGAGATGCCCGATTGGGTCTGTCATTTGGATTCTTTCACGCCCAATTTGCCTTCTTGTGGCAATGCTATCGATCAATTCCCCTGTATTGCTGCTGCTGATCATTATATGTCCATGTCTAATGCTGCCATTGAAGAGAACAAGATGGACTCCATTTTCTCAGCCTGTACTGACGTTTTGCTGCAAGAGATCTCTGTTTTTTCGGGTGAAGATAGATATCTAAACATGGATGTTCAAACCCAGATAGGGAATGATCATAATGCTACCAATTCTGCTAAGGCATTCCATCACAAAAGGAAATCCATTGTCGTCGCTGATGATGATGATCATCATCACAATAAGCTCAACAACCCTACTAAGAAAATTCGTACTTCAAACAATAAAATTAGGAAAGCTACACAGAATAGCAATAAAAAATTGAGCACTCGGCGGCGCAAATGTGAAGAGGATCAGGAATCTGGAGGGCCTGATATGAACAGCTGCAGTAGCGCTAACTCATCAGAGGATGACAGCGCTTCACAAGATACTAATGGTGGTGGCGCTGTTTTAGAGGGCGAGGCATCGCCGCCAAAAGCCAAAACCAGAGCCACCAGAGGCTCTGCTACTGATCCACAAAGCCTTTATGCAAGGAAGAGAAGAGAGAGAATCAATGAGCGGCTTAGAATTCTGCAGAAACTTGTCCCTAATGGAACAAAGGTTGACATCAGCACAATGCTTGAGGAAGCAGTTCATTACGTGAAATTTCTGCAGCTTCAGATAAAGGTATGGACTTCAATTTGTTCATTAAGTTGGGTTCTGAATGATTTGATTTCAAATGCATTGGTCATGATTTCGTTTTATTTGCAGCTTTTGAGCTCTGATGAGATGTGGATGTATGCTCCAATTGCTTACAATGGGATGGATATTGGTCTGCACCAGAAGCTTCCTTCTTTTTTGTGA

Protein sequence

MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAIDQFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGNDHNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRRKCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL

Homology

[Close]

BLAST of Carg21782 vs. NCBI nr
Match: KAG7024298.1 (Transcription factor bHLH84 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 679.5 bits (1752), Expect = 1.5e-191
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60
           MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID
Sbjct: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60

Query: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120
           QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND
Sbjct: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120

Query: 121 HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180
           HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR
Sbjct: 121 HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180

Query: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240
           KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ
Sbjct: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240

Query: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV 300
           SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV
Sbjct: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV 300

Query: 301 LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
           LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL
Sbjct: 301 LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 347

[Close]

BLAST of Carg21782 vs. NCBI nr
Match: XP_023536485.1 (transcription factor bHLH84-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 595.1 bits (1533), Expect = 3.8e-166
Identity = 310/347 (89.34%), Postives = 312/347 (89.91%), Query Frame = 0


Query: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60
           MDSF GL GEGEWDLCSSILSMEELDFTPLIPPPTAEMPDW CHLDSFTPNLPSCGNAID
Sbjct: 1   MDSFGGLSGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWFCHLDSFTPNLPSCGNAID 60

Query: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120
           QFPCIAAADHYM MSNAAI+ENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND
Sbjct: 61  QFPCIAAADHYMPMSNAAIDENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120

Query: 121 HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180
           HNATNSAKAFHHKRKSIVVADDD HHHN LNNPTKKIRTSNNKIRKATQNSNKKLSTRRR
Sbjct: 121 HNATNSAKAFHHKRKSIVVADDDHHHHNNLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180

Query: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240
           KCEEDQE+GGPDMNSC SANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ
Sbjct: 181 KCEEDQENGGPDMNSCCSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240

Query: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV 300
           SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK           
Sbjct: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK----------- 300

Query: 301 LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
                            LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL
Sbjct: 301 -----------------LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 319

[Close]

BLAST of Carg21782 vs. NCBI nr
Match: XP_022937063.1 (transcription factor bHLH139-like [Cucurbita moschata])

HSP 1 Score: 594.0 bits (1530), Expect = 8.5e-166
Identity = 313/347 (90.20%), Postives = 313/347 (90.20%), Query Frame = 0


Query: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60
           MDSF GL GEGEWDLCSSILSMEELDFTPLIPPPTAEMPDW CHLDSFTPNLPSCGNAID
Sbjct: 1   MDSFGGLGGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWFCHLDSFTPNLPSCGNAID 60

Query: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120
           QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND
Sbjct: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120

Query: 121 HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180
           HNATNSAKAFHHKRKSIVVA DDDHHHN LNNPTKKIRTSNNKIRKAT NSNKKLSTRRR
Sbjct: 121 HNATNSAKAFHHKRKSIVVA-DDDHHHNNLNNPTKKIRTSNNKIRKATPNSNKKLSTRRR 180

Query: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240
           KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ
Sbjct: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240

Query: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV 300
           SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK           
Sbjct: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK----------- 300

Query: 301 LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
                            LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL
Sbjct: 301 -----------------LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 318

[Close]

BLAST of Carg21782 vs. NCBI nr
Match: KAG6591418.1 (Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 592.4 bits (1526), Expect = 2.5e-165
Identity = 310/341 (90.91%), Postives = 311/341 (91.20%), Query Frame = 0


Query: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60
           MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID
Sbjct: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60

Query: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120
           QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND
Sbjct: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120

Query: 121 HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180
           HNATNSAKAFHHKRKSIVVADDD HHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR
Sbjct: 121 HNATNSAKAFHHKRKSIVVADDDHHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180

Query: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240
           KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ
Sbjct: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240

Query: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV 300
           SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK           
Sbjct: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK----------- 300

Query: 301 LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQ 342
                            LLSSDEMWMYAPIAYNGMDIG+ Q
Sbjct: 301 -----------------LLSSDEMWMYAPIAYNGMDIGVKQ 313

[Close]

BLAST of Carg21782 vs. NCBI nr
Match: XP_022977069.1 (transcription factor bHLH54-like [Cucurbita maxima])

HSP 1 Score: 589.3 bits (1518), Expect = 2.1e-164
Identity = 308/347 (88.76%), Postives = 312/347 (89.91%), Query Frame = 0


Query: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60
           MDSF GL GEGEWDLCSSILSMEELDFTPL+PPPTAEM DW CHLDSFTPNLPSC NAID
Sbjct: 1   MDSFGGLSGEGEWDLCSSILSMEELDFTPLLPPPTAEMADWFCHLDSFTPNLPSCANAID 60

Query: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120
           QFPCIAAADHYMSMSNAAIEEN+MDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND
Sbjct: 61  QFPCIAAADHYMSMSNAAIEENEMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120

Query: 121 HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180
           +NATNSAKAFHHKRKSIVVADDD HHHN LNNPTKKIRTSNNKIRKATQNSNKKLSTRRR
Sbjct: 121 NNATNSAKAFHHKRKSIVVADDDHHHHNNLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180

Query: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240
           KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPP+AKTRATRGSATDPQ
Sbjct: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPQAKTRATRGSATDPQ 240

Query: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV 300
           SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK           
Sbjct: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK----------- 300

Query: 301 LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
                            LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL
Sbjct: 301 -----------------LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 319

[Close]

BLAST of Carg21782 vs. ExPASy Swiss-Prot
Match: Q7XHI9 (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.7e-31
Identity = 126/324 (38.89%), Postives = 165/324 (50.93%), Query Frame = 0


Query: 53  PSCGNAIDQFPCIAAADHYMSMSNAAIEENKMDSIFSA-CTDVLLQEISVFSGEDRYLNM 112
           P  G++ +    + A  H  S  N     ++  S +S  C  +  QE      ED  +N 
Sbjct: 32  PCGGSSSETTATLTAYHHQGSQWNGGFCFSQESSSYSGYCAAMPRQEEDNNGMEDATINT 91

Query: 113 DVQTQIGNDHNATNSAKAFHHKRKSIV----VADDDDHH----HNKLNNPT-----KKIR 172
           ++   +G +   T+   A  +  KS++    VA++ DH      N L   T      +  
Sbjct: 92  NLYL-VGEE---TSECDATEYSGKSLLPLETVAENHDHSMLQPENSLTTTTDEKMFNQCE 151

Query: 173 TSNNKIRKATQNSNKKLSTRRR--KCEE---DQESGGPDMNSCSSANSSEDD-------- 232
           +S  + R  T + NK+ +  RR  KC E   + E+ G +  +  +A   +          
Sbjct: 152 SSKKRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTC 211

Query: 233 SASQDTNGGGAVL---EGEASPP---KAKTRATRGSATDPQSLYARKRRERINERLRILQ 292
            +  ++NGG   L   +GE S       KTRA+RG+ATDPQSLYARKRRERINERLRILQ
Sbjct: 212 CSDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQ 271

Query: 293 KLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMISFYLQLL 344
            LVPNGTKVDISTMLEEAV YVKFLQLQIK                            LL
Sbjct: 272 HLVPNGTKVDISTMLEEAVQYVKFLQLQIK----------------------------LL 323

[Close]

BLAST of Carg21782 vs. ExPASy Swiss-Prot
Match: Q84WK0 (Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-30
Identity = 116/290 (40.00%), Postives = 148/290 (51.03%), Query Frame = 0


Query: 71  YMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQT-QIGNDHNATNSAKA 130
           Y ++    +EEN+ +++     DV +   S   GE+     DV+    G       +   
Sbjct: 88  YYTVVPPTVEENQNETMDFGMEDVTINTNSYLVGEET-SECDVEKYSSGKTLMPLETVVE 147

Query: 131 FHHKRKSIVVADDDDHHHNKLNNPTKKIR---TSNNKIRKATQNSNKKLSTRRRKCEEDQ 190
            H   +S++ ++        L    K+ R   T  NK  +  + + K +       E ++
Sbjct: 148 NHDDEESLLQSEISVTTTKSLTGSKKRSRATSTDKNKRARVNKRAQKNVEMSGDNNEGEE 207

Query: 191 ESGGPDMNS------CSSANSS-----EDDSASQDTNGGGAVLEG-EASPPKA-----KT 250
           E G   +         S  NSS     E++S   D +GGG      E  P KA     KT
Sbjct: 208 EEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKT 267

Query: 251 RATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK 310
           RA+RG+ATDPQSLYARKRRERINERLRILQ LVPNGTKVDISTMLEEAVHYVKFLQLQIK
Sbjct: 268 RASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIK 327

Query: 311 VWTSICSLSWVLNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGL 340
                                       LLSSD++WMYAPIA+NGMDIGL
Sbjct: 328 ----------------------------LLSSDDLWMYAPIAFNGMDIGL 348

[Close]

BLAST of Carg21782 vs. ExPASy Swiss-Prot
Match: Q8LEG1 (Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 7.1e-30
Identity = 95/214 (44.39%), Postives = 121/214 (56.54%), Query Frame = 0


Query: 142 DDDHHHNKLNNPTKKIRTSNN--KIRKATQNSNKKLSTRRRKCEEDQESGGPD------M 201
           D  HH  + ++  +K+    N  K       + ++L+  ++K     ES   D      +
Sbjct: 85  DQSHHLQETSSLKRKLLDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWV 144

Query: 202 NSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINE 261
           +  S +NSS+D+ AS              +  K KTRAT+G+ATDPQSLYARKRRE+INE
Sbjct: 145 DGQSLSNSSDDEKAS-------------VTSVKGKTRATKGTATDPQSLYARKRREKINE 204

Query: 262 RLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMIS 321
           RL+ LQ LVPNGTKVDISTMLEEAVHYVKFLQLQIK                        
Sbjct: 205 RLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIK------------------------ 257

Query: 322 FYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
               LLSSD++WMYAP+AYNG+D+G H  L S L
Sbjct: 265 ----LLSSDDLWMYAPLAYNGLDMGFHHNLLSRL 257

[Close]

BLAST of Carg21782 vs. ExPASy Swiss-Prot
Match: Q3E7L7 (Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.6e-26
Identity = 87/206 (42.23%), Postives = 114/206 (55.34%), Query Frame = 0


Query: 142 DDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRRKCEEDQESGGPDMNSCSSANS 201
           D  +H    N  +++      K +K +  SN            + ++   D  S SS NS
Sbjct: 61  DGSNHQTNRNVDSRQDLLKPRKKQKLSSESN---------LVTEPKTAWRDGQSLSSYNS 120

Query: 202 SEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKL 261
           S+D+ A         ++   +   K K +A RG A+DPQSLYARKRRERIN+RL+ LQ L
Sbjct: 121 SDDEKAL-------GLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSL 180

Query: 262 VPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMISFYLQLLSS 321
           VPNGTKVDISTMLE+AVHYVKFLQLQIK                            LLSS
Sbjct: 181 VPNGTKVDISTMLEDAVHYVKFLQLQIK----------------------------LLSS 222

Query: 322 DEMWMYAPIAYNGMDIGLHQKLPSFL 348
           +++WMYAP+A+NG+++GLH  L S L
Sbjct: 241 EDLWMYAPLAHNGLNMGLHHNLLSRL 222

[Close]

BLAST of Carg21782 vs. ExPASy Swiss-Prot
Match: Q2QQ32 (Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.3e-20
Identity = 58/107 (54.21%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 235 SATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSI 294
           SA   QS YA+ RR+RINERLRILQ+L+PNGTKVDISTMLEEA+ YVKFL LQIK     
Sbjct: 114 SAESSQSYYAKNRRQRINERLRILQELIPNGTKVDISTMLEEAIQYVKFLHLQIK----- 173

Query: 295 CSLSWVLNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQ 342
                                  LLSSDEMWMYAP+A++  +  L+Q
Sbjct: 174 -----------------------LLSSDEMWMYAPLAFDSGNNRLYQ 192

[Close]

BLAST of Carg21782 vs. ExPASy TrEMBL
Match: A0A6J1FEZ9 (transcription factor bHLH139-like OS=Cucurbita moschata OX=3662 GN=LOC111443476 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 4.1e-166
Identity = 313/347 (90.20%), Postives = 313/347 (90.20%), Query Frame = 0


Query: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60
           MDSF GL GEGEWDLCSSILSMEELDFTPLIPPPTAEMPDW CHLDSFTPNLPSCGNAID
Sbjct: 1   MDSFGGLGGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWFCHLDSFTPNLPSCGNAID 60

Query: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120
           QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND
Sbjct: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120

Query: 121 HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180
           HNATNSAKAFHHKRKSIVVA DDDHHHN LNNPTKKIRTSNNKIRKAT NSNKKLSTRRR
Sbjct: 121 HNATNSAKAFHHKRKSIVVA-DDDHHHNNLNNPTKKIRTSNNKIRKATPNSNKKLSTRRR 180

Query: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240
           KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ
Sbjct: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240

Query: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV 300
           SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK           
Sbjct: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK----------- 300

Query: 301 LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
                            LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL
Sbjct: 301 -----------------LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 318

[Close]

BLAST of Carg21782 vs. ExPASy TrEMBL
Match: A0A6J1IQF1 (transcription factor bHLH54-like OS=Cucurbita maxima OX=3661 GN=LOC111477249 PE=4 SV=1)

HSP 1 Score: 589.3 bits (1518), Expect = 1.0e-164
Identity = 308/347 (88.76%), Postives = 312/347 (89.91%), Query Frame = 0


Query: 1   MDSFAGLIGEGEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAID 60
           MDSF GL GEGEWDLCSSILSMEELDFTPL+PPPTAEM DW CHLDSFTPNLPSC NAID
Sbjct: 1   MDSFGGLSGEGEWDLCSSILSMEELDFTPLLPPPTAEMADWFCHLDSFTPNLPSCANAID 60

Query: 61  QFPCIAAADHYMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120
           QFPCIAAADHYMSMSNAAIEEN+MDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND
Sbjct: 61  QFPCIAAADHYMSMSNAAIEENEMDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGND 120

Query: 121 HNATNSAKAFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180
           +NATNSAKAFHHKRKSIVVADDD HHHN LNNPTKKIRTSNNKIRKATQNSNKKLSTRRR
Sbjct: 121 NNATNSAKAFHHKRKSIVVADDDHHHHNNLNNPTKKIRTSNNKIRKATQNSNKKLSTRRR 180

Query: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQ 240
           KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPP+AKTRATRGSATDPQ
Sbjct: 181 KCEEDQESGGPDMNSCSSANSSEDDSASQDTNGGGAVLEGEASPPQAKTRATRGSATDPQ 240

Query: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWV 300
           SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK           
Sbjct: 241 SLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK----------- 300

Query: 301 LNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
                            LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL
Sbjct: 301 -----------------LLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 319

[Close]

BLAST of Carg21782 vs. ExPASy TrEMBL
Match: A0A0A0L533 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642470 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77
Identity = 213/374 (56.95%), Postives = 240/374 (64.17%), Query Frame = 0


Query: 1   MDSFAG-LIGE-GEWDLCSSILSMEELDFTPLI-PPPTAEMPDWVCHLDSFTPNLPSCGN 60
           MD F G L GE GEWDLCSSILS+E+ D+  +I P PT        H   F  NL S  N
Sbjct: 1   MDCFGGNLSGEAGEWDLCSSILSLEDPDYMHIINPHPTTSPGLMADHAAWFCSNLDS--N 60

Query: 61  AIDQ--FPCIAAA-----DHY----MSMSNAAIEENKMDSIFSA-CTDVLLQEISV--FS 120
            +DQ  FPCIAAA     D+Y    MSMS    + N ++SIFSA  T+ LLQEIS   FS
Sbjct: 61  GVDQYPFPCIAAAAAVYDDYYGHNHMSMSIIDEDNNNLESIFSASSTEFLLQEISSTGFS 120

Query: 121 GEDRYLNMD-VQTQIGNDHNATNSAKAFHHKRKSIVVA-DDDDHHHNKLNNPTKKIRTSN 180
            + ++LNMD VQT +G++    +    FHHKRKS +VA DD DH  N+L  P KKIRTSN
Sbjct: 121 EDHKFLNMDIVQTHLGDE---DDDNPLFHHKRKSSIVAPDDHDHDQNQLIKPNKKIRTSN 180

Query: 181 N---KIRKATQ---NSNKKLSTRRRKCEEDQESG--GPDMNSCSSANSSEDDSASQDTNG 240
           N   K RK T+   NS K  STRRRKCEE+QE+G    DMNSCSS NSSEDD+ +     
Sbjct: 181 NVQIKSRKGTESSGNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDDNNN----- 240

Query: 241 GGAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM 300
                    + PK KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM
Sbjct: 241 ---------ASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTM 300

Query: 301 LEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMISFYLQLLSSDEMWMYAPIAYN 348
           LEEAVHYVKFLQLQIK                            LLSSD++WMYAPIAYN
Sbjct: 301 LEEAVHYVKFLQLQIK----------------------------LLSSDDLWMYAPIAYN 327

[Close]

BLAST of Carg21782 vs. ExPASy TrEMBL
Match: A0A1S3BU96 (transcription factor bHLH85-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493599 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 212/379 (55.94%), Postives = 237/379 (62.53%), Query Frame = 0


Query: 1   MDSFAGLIGE--GEWDLCSSILSMEELDF--TPLIPPPTAEMPDWVCHLDSFTPNLPSCG 60
           MD F G+ G+  GEWDLCSSILS+E+ DF    + P PT        H   F  NL    
Sbjct: 1   MDCFGGMSGDQAGEWDLCSSILSLEDPDFMHINIDPQPTTSPGLMADHAAWFCSNLDYSN 60

Query: 61  NAID--QFPCIAAA------DHY----MSMSNAAIEENKMDSIFSACT-DVLLQEIS--V 120
             +D  QFPCIAAA      D+Y    MSMS    +   ++SIFSA + D+LLQ IS   
Sbjct: 61  GTVDHYQFPCIAAAAAAAYDDYYGHNHMSMSIIDEDNKNLESIFSASSADILLQGISGTG 120

Query: 121 FSGED-RYLNMD-VQTQIG-NDHNATNSAKAFHHKRK-SIVVADDDDHHH----NKLNNP 180
           FS ED ++LNMD VQT +G  D +  N    FHHKRK SIV ADD DH H    N+L  P
Sbjct: 121 FSSEDHKFLNMDIVQTHLGVGDEDDDN--PLFHHKRKSSIVAADDHDHDHDHDQNQLIKP 180

Query: 181 TKKIRTSNN---KIRKATQNSNKKLSTRRRKCEEDQESG--GPDMNSCSSANSSEDDSAS 240
            KKIRTSNN   K +K T+ S K  STRRRKCEE+QE+G    DMNSCSS NSSEDD+ +
Sbjct: 181 NKKIRTSNNVQIKSKKGTE-SKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDDNNN 240

Query: 241 QDTNGGGAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV 300
                         + PK KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV
Sbjct: 241 N-------------ASPKPKTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKV 300

Query: 301 DISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMISFYLQLLSSDEMWMYA 348
           DISTMLEEAVHYVKFLQLQIK                            LLSSDE+WMYA
Sbjct: 301 DISTMLEEAVHYVKFLQLQIK----------------------------LLSSDELWMYA 335

[Close]

BLAST of Carg21782 vs. ExPASy TrEMBL
Match: A0A6J1CHT2 (transcription factor bHLH139 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011030 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 6.3e-74
Identity = 189/340 (55.59%), Postives = 214/340 (62.94%), Query Frame = 0


Query: 11  GEWDLCSSILSMEELDFTPLIPPPTAEMPDWVCHLDSFTPNLPSCGNAIDQFP-CIAAAD 70
           GEWD CSSILS+EELDF P    P A    W C LD          N +DQ P CIAA D
Sbjct: 5   GEWDFCSSILSLEELDFAPFNNSPPAGADAWFCSLD-------YANNFVDQIPCCIAADD 64

Query: 71  HYMSMSNAAIEENK-MDSIFSACTDVLLQEISVFSGEDRYLNMDVQTQIGNDHNATNSAK 130
           H ++    A+EE K M+SI       L+QE++ F G D +  +  Q              
Sbjct: 65  HSIASGGIAMEEMKNMESI-------LVQEMTGFCGHDEHSILPNQ-------------- 124

Query: 131 AFHHKRKSIVVADDDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRRKCEEDQES 190
             H KRKS + ADDD   HN L+ P KKIRTSNNK RK    + +KL +R RKCEE++E+
Sbjct: 125 LLHQKRKSNLPADDD---HNNLHVPKKKIRTSNNKTRKPNVKTMQKLGSRGRKCEEEEEN 184

Query: 191 GGPD-MNSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQSLYARKR 250
           G  D MNS SS NSSED++ASQ+   GG     EA PPKAKTRA+RGSATDPQSLYARKR
Sbjct: 185 GVSDHMNSYSSENSSEDENASQELTNGGHD-RAEAEPPKAKTRASRGSATDPQSLYARKR 244

Query: 251 RERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISN 310
           RERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK                  
Sbjct: 245 RERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK------------------ 284

Query: 311 ALVMISFYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
                     LLSSDE+WMYAPIAYNGMDIGL Q+L SFL
Sbjct: 305 ----------LLSSDELWMYAPIAYNGMDIGLQQRLSSFL 284

[Close]

BLAST of Carg21782 vs. TAIR 10
Match: AT2G14760.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-32
Identity = 126/324 (38.89%), Postives = 165/324 (50.93%), Query Frame = 0


Query: 53  PSCGNAIDQFPCIAAADHYMSMSNAAIEENKMDSIFSA-CTDVLLQEISVFSGEDRYLNM 112
           P  G++ +    + A  H  S  N     ++  S +S  C  +  QE      ED  +N 
Sbjct: 32  PCGGSSSETTATLTAYHHQGSQWNGGFCFSQESSSYSGYCAAMPRQEEDNNGMEDATINT 91

Query: 113 DVQTQIGNDHNATNSAKAFHHKRKSIV----VADDDDHH----HNKLNNPT-----KKIR 172
           ++   +G +   T+   A  +  KS++    VA++ DH      N L   T      +  
Sbjct: 92  NLYL-VGEE---TSECDATEYSGKSLLPLETVAENHDHSMLQPENSLTTTTDEKMFNQCE 151

Query: 173 TSNNKIRKATQNSNKKLSTRRR--KCEE---DQESGGPDMNSCSSANSSEDD-------- 232
           +S  + R  T + NK+ +  RR  KC E   + E+ G +  +  +A   +          
Sbjct: 152 SSKKRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTC 211

Query: 233 SASQDTNGGGAVL---EGEASPP---KAKTRATRGSATDPQSLYARKRRERINERLRILQ 292
            +  ++NGG   L   +GE S       KTRA+RG+ATDPQSLYARKRRERINERLRILQ
Sbjct: 212 CSDDESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQ 271

Query: 293 KLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMISFYLQLL 344
            LVPNGTKVDISTMLEEAV YVKFLQLQIK                            LL
Sbjct: 272 HLVPNGTKVDISTMLEEAVQYVKFLQLQIK----------------------------LL 323

[Close]

BLAST of Carg21782 vs. TAIR 10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2 )

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-31
Identity = 116/290 (40.00%), Postives = 148/290 (51.03%), Query Frame = 0


Query: 71  YMSMSNAAIEENKMDSIFSACTDVLLQEISVFSGEDRYLNMDVQT-QIGNDHNATNSAKA 130
           Y ++    +EEN+ +++     DV +   S   GE+     DV+    G       +   
Sbjct: 88  YYTVVPPTVEENQNETMDFGMEDVTINTNSYLVGEET-SECDVEKYSSGKTLMPLETVVE 147

Query: 131 FHHKRKSIVVADDDDHHHNKLNNPTKKIR---TSNNKIRKATQNSNKKLSTRRRKCEEDQ 190
            H   +S++ ++        L    K+ R   T  NK  +  + + K +       E ++
Sbjct: 148 NHDDEESLLQSEISVTTTKSLTGSKKRSRATSTDKNKRARVNKRAQKNVEMSGDNNEGEE 207

Query: 191 ESGGPDMNS------CSSANSS-----EDDSASQDTNGGGAVLEG-EASPPKA-----KT 250
           E G   +         S  NSS     E++S   D +GGG      E  P KA     KT
Sbjct: 208 EEGETKLKKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKT 267

Query: 251 RATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIK 310
           RA+RG+ATDPQSLYARKRRERINERLRILQ LVPNGTKVDISTMLEEAVHYVKFLQLQIK
Sbjct: 268 RASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIK 327

Query: 311 VWTSICSLSWVLNDLISNALVMISFYLQLLSSDEMWMYAPIAYNGMDIGL 340
                                       LLSSD++WMYAPIA+NGMDIGL
Sbjct: 328 ----------------------------LLSSDDLWMYAPIAFNGMDIGL 348

[Close]

BLAST of Carg21782 vs. TAIR 10
Match: AT1G27740.1 (root hair defective 6-like 4 )

HSP 1 Score: 132.9 bits (333), Expect = 5.0e-31
Identity = 95/214 (44.39%), Postives = 121/214 (56.54%), Query Frame = 0


Query: 142 DDDHHHNKLNNPTKKIRTSNN--KIRKATQNSNKKLSTRRRKCEEDQESGGPD------M 201
           D  HH  + ++  +K+    N  K       + ++L+  ++K     ES   D      +
Sbjct: 85  DQSHHLQETSSLKRKLLDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWV 144

Query: 202 NSCSSANSSEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINE 261
           +  S +NSS+D+ AS              +  K KTRAT+G+ATDPQSLYARKRRE+INE
Sbjct: 145 DGQSLSNSSDDEKAS-------------VTSVKGKTRATKGTATDPQSLYARKRREKINE 204

Query: 262 RLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMIS 321
           RL+ LQ LVPNGTKVDISTMLEEAVHYVKFLQLQIK                        
Sbjct: 205 RLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIK------------------------ 257

Query: 322 FYLQLLSSDEMWMYAPIAYNGMDIGLHQKLPSFL 348
               LLSSD++WMYAP+AYNG+D+G H  L S L
Sbjct: 265 ----LLSSDDLWMYAPLAYNGLDMGFHHNLLSRL 257

[Close]

BLAST of Carg21782 vs. TAIR 10
Match: AT2G14760.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 124.0 bits (310), Expect = 2.3e-28
Identity = 122/334 (36.53%), Postives = 162/334 (48.50%), Query Frame = 0


Query: 53  PSCGNAIDQFPCIAAADHYMSMSNAAIEENKMDSIFSA-CTDVLLQEISVFSGEDRYLNM 112
           P  G++ +    + A  H  S  N     ++  S +S  C  +  QE      ED  +N 
Sbjct: 32  PCGGSSSETTATLTAYHHQGSQWNGGFCFSQESSSYSGYCAAMPRQEEDNNGMEDATINT 91

Query: 113 DVQTQIGNDHNATNSAKAFHHKRKSI-VVADDDDHH----HNKLNNPT-----KKIRTSN 172
           ++   +G + +  ++ +        +  VA++ DH      N L   T      +  +S 
Sbjct: 92  NLYL-VGEETSECDATEYSGKSLLPLETVAENHDHSMLQPENSLTTTTDEKMFNQCESSK 151

Query: 173 NKIRKATQNSNKKLSTRRR--KCEE---DQESGGPDMNSCSSANSSEDD--------SAS 232
            + R  T + NK+ +  RR  KC E   + E+ G +  +  +A   +           + 
Sbjct: 152 KRTRATTTDKNKRANKARRSQKCVEMSGENENSGEEEYTEKAAGKRKTKPLKPQKTCCSD 211

Query: 233 QDTNGGGAVL---EGEASPP---KAKTRATRGSATDPQSLYAR-------------KRRE 292
            ++NGG   L   +GE S       KTRA+RG+ATDPQSLYAR             KRRE
Sbjct: 212 DESNGGDTFLSKEDGEDSKALNLNGKTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRE 271

Query: 293 RINERLRILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNAL 344
           RINERLRILQ LVPNGTKVDISTMLEEAV YVKFLQLQIK                    
Sbjct: 272 RINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIK-------------------- 331

[Close]

BLAST of Carg21782 vs. TAIR 10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-27
Identity = 87/206 (42.23%), Postives = 114/206 (55.34%), Query Frame = 0


Query: 142 DDDHHHNKLNNPTKKIRTSNNKIRKATQNSNKKLSTRRRKCEEDQESGGPDMNSCSSANS 201
           D  +H    N  +++      K +K +  SN            + ++   D  S SS NS
Sbjct: 61  DGSNHQTNRNVDSRQDLLKPRKKQKLSSESN---------LVTEPKTAWRDGQSLSSYNS 120

Query: 202 SEDDSASQDTNGGGAVLEGEASPPKAKTRATRGSATDPQSLYARKRRERINERLRILQKL 261
           S+D+ A         ++   +   K K +A RG A+DPQSLYARKRRERIN+RL+ LQ L
Sbjct: 121 SDDEKAL-------GLVSNTSKSLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSL 180

Query: 262 VPNGTKVDISTMLEEAVHYVKFLQLQIKVWTSICSLSWVLNDLISNALVMISFYLQLLSS 321
           VPNGTKVDISTMLE+AVHYVKFLQLQIK                            LLSS
Sbjct: 181 VPNGTKVDISTMLEDAVHYVKFLQLQIK----------------------------LLSS 222

Query: 322 DEMWMYAPIAYNGMDIGLHQKLPSFL 348
           +++WMYAP+A+NG+++GLH  L S L
Sbjct: 241 EDLWMYAPLAHNGLNMGLHHNLLSRL 222

The following BLAST results are available for this feature:

BLAST of Carg21782 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024298.1	1.5e-191	100.00	Transcription factor bHLH84 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023536485.1	3.8e-166	89.34	transcription factor bHLH84-like [Cucurbita pepo subsp. pepo]	[more]
XP_022937063.1	8.5e-166	90.20	transcription factor bHLH139-like [Cucurbita moschata]	[more]
KAG6591418.1	2.5e-165	90.91	Transcription factor basic helix-loop-helix 85, partial [Cucurbita argyrosperma ...	[more]
XP_022977069.1	2.1e-164	88.76	transcription factor bHLH54-like [Cucurbita maxima]	[more]

BLAST of Carg21782 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XHI9	1.7e-31	38.89	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
Q84WK0	1.4e-30	40.00	Transcription factor RSL2 OS=Arabidopsis thaliana OX=3702 GN=RSL2 PE=2 SV=1	[more]
Q8LEG1	7.1e-30	44.39	Transcription factor RSL3 OS=Arabidopsis thaliana OX=3702 GN=RSL4 PE=1 SV=1	[more]
Q3E7L7	1.6e-26	42.23	Transcription factor bHLH139 OS=Arabidopsis thaliana OX=3702 GN=BHLH139 PE=3 SV=...	[more]
Q2QQ32	2.3e-20	54.21	Transcription factor BHLH133 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH133...	[more]

BLAST of Carg21782 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEZ9	4.1e-166	90.20	transcription factor bHLH139-like OS=Cucurbita moschata OX=3662 GN=LOC111443476 ...	[more]
A0A6J1IQF1	1.0e-164	88.76	transcription factor bHLH54-like OS=Cucurbita maxima OX=3661 GN=LOC111477249 PE=...	[more]
A0A0A0L533	1.6e-77	56.95	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G642470 PE=4 S...	[more]
A0A1S3BU96	2.0e-75	55.94	transcription factor bHLH85-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493...	[more]
A0A6J1CHT2	6.3e-74	55.59	transcription factor bHLH139 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of Carg21782 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14760.1	1.2e-32	38.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G33880.1	1.0e-31	40.00	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT1G27740.1	5.0e-31	44.39	root hair defective 6-like 4	[more]
AT2G14760.3	2.3e-28	36.53	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G43175.1	1.2e-27	42.23	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 241..290 e-value: 2.8E-11 score: 53.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 245..285 e-value: 1.0E-8 score: 35.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 235..284 score: 15.046477
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 237..292 e-value: 1.9E-11 score: 45.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 234..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..171
None	No IPR available	PANTHER	PTHR16223:SF143	TRANSCRIPTION FACTOR BHLH54	coord: 70..290
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 70..290
None	No IPR available	PANTHER	PTHR16223:SF143	TRANSCRIPTION FACTOR BHLH54	coord: 317..345
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 317..345
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 236..290 e-value: 4.1156E-34 score: 118.263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21782-RA	Carg21782-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity