Carg21771 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21771
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SOB FIVE-LIKE 6-like
Location	Carg_Chr09: 1368324 .. 1369236 (+)
RNA-Seq Expression	Carg21771
Synteny	Carg21771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGATTGGTCTGCTACACATTATTGCAGTGGAGGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCAGACCATCGTTTCGGCGGCGGGGTTGATGGGGTAAAGGAAGCAAAAGCAAGAGCAGAGGAGGCGGATGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCACATTACCTTGAGGACAACGAAGAATTGTTTTACAATAATGGGTATTCTTCCTATGCCTATTCAGCTTCAGATTCAACAATAAATTGCAGCAAGGAGGAGAAAAAGAAGAGCAAGAAAAGCAAACAAAATGGCAGAAATCAGCAACCTTCTTACCTTGATGACACTGCTAGCTCCCCTGTATATGGCTACGGCAAAGCAAGCGTAAACAACAGTTCCATCAGATTCTTCCCTGTAGGTCCAAGAATTCTTCTATCGTTCTAATGTTGTTGATTGTTCATCGTGCAGAAAATCAAGGCAGCAACAAGCAACAAAGCTTTGGAGGAGAATCCAGTTGATTTTTCTCAGGGATTCTCAGCAACCCACTTTAAGGTAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTAAAATCGAGCAAGTTCTTTGATGTGTTATTAACTCAAAACTGAAACTTTAATTAAACACAGAGAAAATCTGCACTGAGGAAACAAAAATCAGCGCCAGAAGAATAAGGGTATTAGCGATTCCGCCGCAGCTTCCGATGCCCTTTTTGGGCCGTCAAGTAAATGACAACGACATGTTATAGAAATCAGAGGGATATTGTTCCTTTTATTATTATTATTATTATTCTCAATTTAATTTCTCCCCAATGTTTTAGGCTGTGTTGGCTTCTCTTTTCCACGTTCTTGTCAAGGCAATGGGAAACATGAAACACTAA

mRNA sequence

ATGAATGATTGGTCTGCTACACATTATTGCAGTGGAGGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCAGACCATCGTTTCGGCGGCGGGGTTGATGGGGTAAAGGAAGCAAAAGCAAGAGCAGAGGAGGCGGATGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCACATTACCTTGAGGACAACGAAGAATTGTTTTACAATAATGGGTATTCTTCCTATGCCTATTCAGCTTCAGATTCAACAATAAATTGCAGCAAGGAGGAGAAAAAGAAGAGCAAGAAAAGCAAACAAAATGGCAGAAATCAGCAACCTTCTTACCTTGATGACACTGCTAGCTCCCCTGTATATGGCTACGGCAAAGCAAGCAAAATCAAGGCAGCAACAAGCAACAAAGCTTTGGAGGAGAATCCAGTTGATTTTTCTCAGGGATTCTCAGCAACCCACTTTAAGGCTGTGTTGGCTTCTCTTTTCCACGTTCTTGTCAAGGCAATGGGAAACATGAAACACTAA

Coding sequence (CDS)

ATGAATGATTGGTCTGCTACACATTATTGCAGTGGAGGTGAATCAGGTTGGACTATGTACTTAGACCAATCCTATACTTCAGACCATCGTTTCGGCGGCGGGGTTGATGGGGTAAAGGAAGCAAAAGCAAGAGCAGAGGAGGCGGATGAAGAAGATCTATCAATGGTGTCTGATGCTTCCTCAGGTCCACCACATTACCTTGAGGACAACGAAGAATTGTTTTACAATAATGGGTATTCTTCCTATGCCTATTCAGCTTCAGATTCAACAATAAATTGCAGCAAGGAGGAGAAAAAGAAGAGCAAGAAAAGCAAACAAAATGGCAGAAATCAGCAACCTTCTTACCTTGATGACACTGCTAGCTCCCCTGTATATGGCTACGGCAAAGCAAGCAAAATCAAGGCAGCAACAAGCAACAAAGCTTTGGAGGAGAATCCAGTTGATTTTTCTCAGGGATTCTCAGCAACCCACTTTAAGGCTGTGTTGGCTTCTCTTTTCCACGTTCTTGTCAAGGCAATGGGAAACATGAAACACTAA

Protein sequence

MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTASSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFKAVLASLFHVLVKAMGNMKH

Homology

[Close]

BLAST of Carg21771 vs. NCBI nr
Match: KAG7024309.1 (hypothetical protein SDJN02_13123, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353.6 bits (906), Expect = 1.0e-93
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60
           MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60

Query: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120
           SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA
Sbjct: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120

Query: 121 SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFKAVLASLFHVLVKAMGNMKH 179
           SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFKAVLASLFHVLVKAMGNMKH
Sbjct: 121 SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFKAVLASLFHVLVKAMGNMKH 178

[Close]

BLAST of Carg21771 vs. NCBI nr
Match: XP_022936106.1 (uncharacterized protein LOC111442806 [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 3.9e-82
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60
           MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60

Query: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120
           SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA
Sbjct: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120

Query: 121 SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFK 160
           SSPVYGYGKASKIKAATSNKA EENPVDFSQGFSATHFK
Sbjct: 121 SSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFK 159

[Close]

BLAST of Carg21771 vs. NCBI nr
Match: KAG6591429.1 (hypothetical protein SDJN03_13775, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315.1 bits (806), Expect = 3.9e-82
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60
           MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60

Query: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120
           SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA
Sbjct: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120

Query: 121 SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFK 160
           SSPVYGYGKASKIKAATSNKA EENPVDFSQGFSATHFK
Sbjct: 121 SSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFK 159

[Close]

BLAST of Carg21771 vs. NCBI nr
Match: XP_022977119.1 (uncharacterized protein LOC111477282 [Cucurbita maxima])

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 159/168 (94.64%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60
           MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60

Query: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120
           SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA
Sbjct: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120

Query: 121 SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFKAVLASLFHV 169
           SSPVYGYGKASKIKAA SNKA EENPVDFSQGFSATHFK   A   H+
Sbjct: 121 SSPVYGYGKASKIKAAASNKASEENPVDFSQGFSATHFKRKSAMRKHL 168

[Close]

BLAST of Carg21771 vs. NCBI nr
Match: XP_023536152.1 (uncharacterized protein LOC111797395 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.3e-81
Identity = 156/159 (98.11%), Postives = 156/159 (98.11%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60
           MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60

Query: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120
           SGPPHYLEDNEELFYNNGYSSY YSASDSTINCSKEE KKSKKSKQNGRNQQPSYLDDTA
Sbjct: 61  SGPPHYLEDNEELFYNNGYSSYTYSASDSTINCSKEENKKSKKSKQNGRNQQPSYLDDTA 120

Query: 121 SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFK 160
           SSPVYGYGKASKIKAATSNKA EENPVDFSQGFSATHFK
Sbjct: 121 SSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFK 159

[Close]

BLAST of Carg21771 vs. ExPASy Swiss-Prot
Match: Q8L9K4 (Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11
Identity = 59/164 (35.98%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 11  SGGESGWTMYLDQSYTSD----HRFGGGVDGVKEAK--------ARAEEADEEDLSMVSD 70
           SG ESGWT+YLDQS +S      R   G D  + +K         + EE +E+DLSM+SD
Sbjct: 6   SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISD 65

Query: 71  ASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 130
           ASSGP +  E++                S   IN    +K+  ++ K+    +  S LDD
Sbjct: 66  ASSGPRNISEED----------------SVKKINIVGLKKQCKREKKRRDYEKMNSLLDD 125

Query: 131 TASSPVYGYGKASKIKAATSNK---ALEENPVDFSQGFSATHFK 160
           TASSP++ +    + K+   NK      E+ +D+SQGFSAT F+
Sbjct: 126 TASSPLFNFPHMLQ-KSVGGNKIEQTFPESTLDYSQGFSATQFQ 152

[Close]

BLAST of Carg21771 vs. ExPASy Swiss-Prot
Match: B6IDH8 (Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.4e-05
Identity = 51/156 (32.69%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 3   DWSATHYCSGGESGWTMYLDQSYT-SDHRFGGGVDGVKEAKARAEEADEEDLSMVSDASS 62
           D+S   Y   G+SGWTMYL  S + S H F              ++  +ED SMVSDASS
Sbjct: 2   DFSDLDYSDAGDSGWTMYLGHSSSVSLHHF-------DYHNGETKQEHDEDSSMVSDASS 61

Query: 63  GPPHYLED---NEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 122
           GPP+Y E+    + L  N  Y   + S        +K + KK    +Q    +  S  DD
Sbjct: 62  GPPYYCEETVHEDHLQQNTQYWCKSKSK-------NKNKNKKKVHEEQGYSERFNSSFDD 121

Query: 123 TASSPVYGYGKASKIKAATSNKALEENPVDFSQGFS 155
           TASS   G     ++ A   ++   +   DF Q +S
Sbjct: 122 TASSLPVG----EEVSAHKQHQNQYQRFHDFCQSYS 139

[Close]

BLAST of Carg21771 vs. ExPASy TrEMBL
Match: A0A6J1F6K7 (uncharacterized protein LOC111442806 OS=Cucurbita moschata OX=3662 GN=LOC111442806 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60
           MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60

Query: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120
           SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA
Sbjct: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120

Query: 121 SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFK 160
           SSPVYGYGKASKIKAATSNKA EENPVDFSQGFSATHFK
Sbjct: 121 SSPVYGYGKASKIKAATSNKASEENPVDFSQGFSATHFK 159

[Close]

BLAST of Carg21771 vs. ExPASy TrEMBL
Match: A0A6J1IQJ9 (uncharacterized protein LOC111477282 OS=Cucurbita maxima OX=3661 GN=LOC111477282 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.5e-82
Identity = 159/168 (94.64%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60
           MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS
Sbjct: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDGVKEAKARAEEADEEDLSMVSDAS 60

Query: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120
           SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA
Sbjct: 61  SGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDDTA 120

Query: 121 SSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFKAVLASLFHV 169
           SSPVYGYGKASKIKAA SNKA EENPVDFSQGFSATHFK   A   H+
Sbjct: 121 SSPVYGYGKASKIKAAASNKASEENPVDFSQGFSATHFKRKSAMRKHL 168

[Close]

BLAST of Carg21771 vs. ExPASy TrEMBL
Match: A0A5D3D989 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002630 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.2e-61
Identity = 133/175 (76.00%), Postives = 141/175 (80.57%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDG-----VKEAKARAEEA--DEEDL 60
           MNDWSATHYCSG ESGWTMYLDQSYTSDHRF GG  G      KEAKAR EE   +EEDL
Sbjct: 1   MNDWSATHYCSGSESGWTMYLDQSYTSDHRFNGGSGGSENYKAKEAKARTEEEEDEEEDL 60

Query: 61  SMVSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQP 120
           SMVSDASSGPPHY+EDNEELFYNNGYSSYA SAS+        E+KKS+K K+NGRNQQ 
Sbjct: 61  SMVSDASSGPPHYIEDNEELFYNNGYSSYAISASEL-------ERKKSQKGKRNGRNQQH 120

Query: 121 SYLDDTASSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFKAVLASLFHV 169
           SYLDDTASSPVYGY KA+KI  ATSNKALEENPVDFSQGFSATHFK   A   H+
Sbjct: 121 SYLDDTASSPVYGYTKANKINTATSNKALEENPVDFSQGFSATHFKRKSALRKHL 168

[Close]

BLAST of Carg21771 vs. ExPASy TrEMBL
Match: A0A1S3BVI5 (uncharacterized protein LOC103493609 OS=Cucumis melo OX=3656 GN=LOC103493609 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.2e-61
Identity = 133/175 (76.00%), Postives = 141/175 (80.57%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDG-----VKEAKARAEEA--DEEDL 60
           MNDWSATHYCSG ESGWTMYLDQSYTSDHRF GG  G      KEAKAR EE   +EEDL
Sbjct: 1   MNDWSATHYCSGSESGWTMYLDQSYTSDHRFNGGSGGSENYKAKEAKARTEEEEDEEEDL 60

Query: 61  SMVSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQP 120
           SMVSDASSGPPHY+EDNEELFYNNGYSSYA SAS+        E+KKS+K K+NGRNQQ 
Sbjct: 61  SMVSDASSGPPHYIEDNEELFYNNGYSSYAISASEL-------ERKKSQKGKRNGRNQQH 120

Query: 121 SYLDDTASSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFKAVLASLFHV 169
           SYLDDTASSPVYGY KA+KI  ATSNKALEENPVDFSQGFSATHFK   A   H+
Sbjct: 121 SYLDDTASSPVYGYTKANKINTATSNKALEENPVDFSQGFSATHFKRKSALRKHL 168

[Close]

BLAST of Carg21771 vs. ExPASy TrEMBL
Match: A0A6J1CDG6 (uncharacterized protein LOC111010447 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010447 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 5.9e-60
Identity = 128/164 (78.05%), Postives = 136/164 (82.93%), Query Frame = 0


Query: 1   MNDWSATHYCSGGESGWTMYLDQSYTSDHRFGGGVDG----VKEAKARAEEAD-EEDLSM 60
           MNDWS+ HYCSGGESGWTMYLDQSY S+HRFGGG  G     KEAK R EE D EEDLSM
Sbjct: 1   MNDWSSAHYCSGGESGWTMYLDQSYDSEHRFGGGGVGENYREKEAKVRTEEEDEEEDLSM 60

Query: 61  VSDASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSY 120
           VSDASSGPPHYLEDNE   YNNGYSSYAYSA++S  NC +E+KKK KK   +GRNQQ SY
Sbjct: 61  VSDASSGPPHYLEDNEGYVYNNGYSSYAYSAAESAANCKEEKKKKGKK---HGRNQQHSY 120

Query: 121 LDDTASSPVYGYGKASKIKAATSNKALEENPVDFSQGFSATHFK 160
           LDDTASSPVYGYGKASKI AA SN+A EEN VDFSQGFSATHFK
Sbjct: 121 LDDTASSPVYGYGKASKINAAPSNEASEENAVDFSQGFSATHFK 161

[Close]

BLAST of Carg21771 vs. TAIR 10
Match: AT4G33800.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-12
Identity = 59/164 (35.98%), Postives = 85/164 (51.83%), Query Frame = 0


Query: 11  SGGESGWTMYLDQSYTSD----HRFGGGVDGVKEAK--------ARAEEADEEDLSMVSD 70
           SG ESGWT+YLDQS +S      R   G D  + +K         + EE +E+DLSM+SD
Sbjct: 6   SGCESGWTLYLDQSVSSPSPSCFRDSNGFDSRRRSKDSWDQNYVHQEEEEEEDDLSMISD 65

Query: 71  ASSGPPHYLEDNEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 130
           ASSGP +  E++                S   IN    +K+  ++ K+    +  S LDD
Sbjct: 66  ASSGPRNISEED----------------SVKKINIVGLKKQCKREKKRRDYEKMNSLLDD 125

Query: 131 TASSPVYGYGKASKIKAATSNK---ALEENPVDFSQGFSATHFK 160
           TASSP++ +    + K+   NK      E+ +D+SQGFSAT F+
Sbjct: 126 TASSPLFNFPHMLQ-KSVGGNKIEQTFPESTLDYSQGFSATQFQ 152

[Close]

BLAST of Carg21771 vs. TAIR 10
Match: AT1G58460.1 (unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 51/156 (32.69%), Postives = 71/156 (45.51%), Query Frame = 0


Query: 3   DWSATHYCSGGESGWTMYLDQSYT-SDHRFGGGVDGVKEAKARAEEADEEDLSMVSDASS 62
           D+S   Y   G+SGWTMYL  S + S H F              ++  +ED SMVSDASS
Sbjct: 2   DFSDLDYSDAGDSGWTMYLGHSSSVSLHHF-------DYHNGETKQEHDEDSSMVSDASS 61

Query: 63  GPPHYLED---NEELFYNNGYSSYAYSASDSTINCSKEEKKKSKKSKQNGRNQQPSYLDD 122
           GPP+Y E+    + L  N  Y   + S        +K + KK    +Q    +  S  DD
Sbjct: 62  GPPYYCEETVHEDHLQQNTQYWCKSKSK-------NKNKNKKKVHEEQGYSERFNSSFDD 121

Query: 123 TASSPVYGYGKASKIKAATSNKALEENPVDFSQGFS 155
           TASS   G     ++ A   ++   +   DF Q +S
Sbjct: 122 TASSLPVG----EEVSAHKQHQNQYQRFHDFCQSYS 139

The following BLAST results are available for this feature:

BLAST of Carg21771 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024309.1	1.0e-93	100.00	hypothetical protein SDJN02_13123, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022936106.1	3.9e-82	99.37	uncharacterized protein LOC111442806 [Cucurbita moschata]	[more]
KAG6591429.1	3.9e-82	99.37	hypothetical protein SDJN03_13775, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022977119.1	1.1e-81	94.64	uncharacterized protein LOC111477282 [Cucurbita maxima]	[more]
XP_023536152.1	4.3e-81	98.11	uncharacterized protein LOC111797395 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg21771 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9K4	2.2e-11	35.98	Protein SOB FIVE-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=SOFL5 PE=2 SV=1	[more]
B6IDH8	2.4e-05	32.69	Protein SOB FIVE-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=SOFL6 PE=2 SV=1	[more]

BLAST of Carg21771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6K7	1.9e-82	99.37	uncharacterized protein LOC111442806 OS=Cucurbita moschata OX=3662 GN=LOC1114428...	[more]
A0A6J1IQJ9	5.5e-82	94.64	uncharacterized protein LOC111477282 OS=Cucurbita maxima OX=3661 GN=LOC111477282...	[more]
A0A5D3D989	3.2e-61	76.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BVI5	3.2e-61	76.00	uncharacterized protein LOC103493609 OS=Cucumis melo OX=3656 GN=LOC103493609 PE=...	[more]
A0A6J1CDG6	5.9e-60	78.05	uncharacterized protein LOC111010447 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Carg21771 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33800.1	1.6e-12	35.98	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G58460.1	1.7e-06	32.69	unknown protein; Has 35 Blast hits to 35 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..67
None	No IPR available	PANTHER	PTHR33347:SF40	SUBFAMILY NOT NAMED	coord: 1..161
IPR044670	SOB-five-Like (SOFL) family	PANTHER	PTHR33347	OSJNBA0091C07.3 PROTEIN	coord: 1..161

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21771-RA	Carg21771-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009691	cytokinin biosynthetic process
biological_process	GO:0009690	cytokinin metabolic process