Carg21732 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21732
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	glutaredoxin-C6
Location	Carg_Chr09: 1556710 .. 1557123 (-)
RNA-Seq Expression	Carg21732
Synteny	Carg21732

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGCCTACGACGGTGCTCCGACGACCTCCTCCACCTGGACTTATCACCACCGCCCGCCTCCCCCTCTTCTACCTCCCTCTCCATCGACGTGGCCGAGTCCGCCGAAACTCGAATCCGCCGCCTCATTTCCGAACACCCCGTCATCATCTTCAGCCGCACTTCTTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCAACCCCACCGTTATCGAATTGGACGACGAAGAGATCGACGCCTTAGCAACCTACTCCACCTCCACCACCGCCACCACCACCACTCCTGCTGTCTTCATCGGCGGCGCCTTCATCGGCGGCCTCGAATCCCTCGTCGCCCTCCACCTCAGCGGCCACCTCGTACCTAAGCTCGTCGAAGTCGGCGCTCTTTGGGTATGA

mRNA sequence

ATGCAAGGCCTACGACGGTGCTCCGACGACCTCCTCCACCTGGACTTATCACCACCGCCCGCCTCCCCCTCTTCTACCTCCCTCTCCATCGACGTGGCCGAGTCCGCCGAAACTCGAATCCGCCGCCTCATTTCCGAACACCCCGTCATCATCTTCAGCCGCACTTCTTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCAACCCCACCGTTATCGAATTGGACGACGAAGAGATCGACGCCTTAGCAACCTACTCCACCTCCACCACCGCCACCACCACCACTCCTGCTGTCTTCATCGGCGGCGCCTTCATCGGCGGCCTCGAATCCCTCGTCGCCCTCCACCTCAGCGGCCACCTCGTACCTAAGCTCGTCGAAGTCGGCGCTCTTTGGGTATGA

Coding sequence (CDS)

ATGCAAGGCCTACGACGGTGCTCCGACGACCTCCTCCACCTGGACTTATCACCACCGCCCGCCTCCCCCTCTTCTACCTCCCTCTCCATCGACGTGGCCGAGTCCGCCGAAACTCGAATCCGCCGCCTCATTTCCGAACACCCCGTCATCATCTTCAGCCGCACTTCTTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGCGTCAACCCCACCGTTATCGAATTGGACGACGAAGAGATCGACGCCTTAGCAACCTACTCCACCTCCACCACCGCCACCACCACCACTCCTGCTGTCTTCATCGGCGGCGCCTTCATCGGCGGCCTCGAATCCCTCGTCGCCCTCCACCTCAGCGGCCACCTCGTACCTAAGCTCGTCGAAGTCGGCGCTCTTTGGGTATGA

Protein sequence

MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALHLSGHLVPKLVEVGALWV

Homology

[Close]

BLAST of Carg21732 vs. NCBI nr
Match: KAG7024348.1 (Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.4 bits (677), Expect = 2.7e-67
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALWV 138
           LSGHLVPKLVEVGALWV
Sbjct: 121 LSGHLVPKLVEVGALWV 137

[Close]

BLAST of Carg21732 vs. NCBI nr
Match: XP_022935887.1 (glutaredoxin-C6-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 134/137 (97.81%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTA+TTTPAVFIGGAF+GGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTASTTTPAVFIGGAFVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALWV 138
           LSGHLVPKLVEVGALW+
Sbjct: 121 LSGHLVPKLVEVGALWI 137

[Close]

BLAST of Carg21732 vs. NCBI nr
Match: XP_022935886.1 (glutaredoxin-C6-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 262.3 bits (669), Expect = 2.3e-66
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTA+TTTPAVFIGGAF+GGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTASTTTPAVFIGGAFVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALW 137
           LSGHLVPKLVEVGALW
Sbjct: 121 LSGHLVPKLVEVGALW 136

[Close]

BLAST of Carg21732 vs. NCBI nr
Match: KAG6591467.1 (Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262.3 bits (669), Expect = 2.3e-66
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDL PPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLPPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALW 137
           LSGHLVPKLVEVGALW
Sbjct: 121 LSGHLVPKLVEVGALW 136

[Close]

BLAST of Carg21732 vs. NCBI nr
Match: XP_023536051.1 (glutaredoxin-C6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.8 bits (665), Expect = 6.8e-66
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGA +GGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGASVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALW 137
           LSGHLVPKLVEVGALW
Sbjct: 121 LSGHLVPKLVEVGALW 136

[Close]

BLAST of Carg21732 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 1.1e-42
Identity = 96/140 (68.57%), Postives = 110/140 (78.57%), Query Frame = 0


Query: 3   GLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHV 62
           GL+R S+D++ LDL+ PP+  SSTSLSID  ES E +IRRLISEHPVIIFSR+SCCMCHV
Sbjct: 6   GLQRFSNDVVRLDLT-PPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHV 65

Query: 63  MKKLLATIGVNPTVIELDDEEIDALAT-----YSTSTTATTTTPAVFIGGAFIGGLESLV 122
           MK+LLATIGV PTVIELDD E+ +L T     YS   +     PAVFIG   +GGLESLV
Sbjct: 66  MKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 138
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of Carg21732 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.1e-37
Identity = 89/152 (58.55%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLS---------PPPA------SPSSTSLSIDVAESAETRIRRLIS 60
           M+GLR CS+D + LDL+         PPPA      S +STSLS D  E++E++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVF 120
           EHPVIIF+R +SCCMCHVMKKLL+T+GV+PTVIE+DD EI  L        A    P +F
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYL--------AVEAAPVLF 123

Query: 121 IGGAFIGGLESLVALHLSGHLVPKLVEVGALW 137
           IGG  +GG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 IGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of Carg21732 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.6e-23
Identity = 56/102 (54.90%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 34  ESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVNPTVIELDDEEIDALATYSTS 93
           E    RI RL+ E PV+IF+R  CCMCHVM++LLA +G + TVIELD+   +A A    S
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAA----S 98

Query: 94  TTATTTTPAVFIGGAFIGGLESLVALHLSGHLVPKLVEVGAL 136
             A    PA+F+GGA +GGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  AAAAAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of Carg21732 vs. ExPASy Swiss-Prot
Match: Q9SGP6 (Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 46/104 (44.23%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 39  RIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVNPTVIELDDEEIDALATYSTST---- 98
           R+R ++ E+ VI+  R  CCMCHV+++LL  +GVNP V+E+D+E  D + +   +     
Sbjct: 34  RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQG 93

Query: 99  -TATTTTPAVFIGGAFIGGLESLVALHLSGHLVPKLVEVGALWV 138
              T   PAV++GG   GGL+ ++A H+SG LVP L EVGALW+
Sbjct: 94  GGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Carg21732 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.5e-18
Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 39  RIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVNPTVIELDD-----EEIDALATYSTS 98
           R+ RL ++  V+IFS +SCCMCH + +L   +GVNPTV+ELD+     E   ALA     
Sbjct: 3   RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGR 62

Query: 99  TTATTTTPAVFIGGAFIGGLESLVALHLSGHLVPKLVEVGALWV 138
           + A    PAVFIGG  +G  + +++LHLSG+LVP L   GALWV
Sbjct: 63  SPA---VPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of Carg21732 vs. ExPASy TrEMBL
Match: A0A6J1F6V2 (glutaredoxin-C6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE=3 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 6.6e-67
Identity = 134/137 (97.81%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTA+TTTPAVFIGGAF+GGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTASTTTPAVFIGGAFVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALWV 138
           LSGHLVPKLVEVGALW+
Sbjct: 121 LSGHLVPKLVEVGALWI 137

[Close]

BLAST of Carg21732 vs. ExPASy TrEMBL
Match: A0A6J1F5Z5 (glutaredoxin-C6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 134/136 (98.53%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTA+TTTPAVFIGGAF+GGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTASTTTPAVFIGGAFVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALW 137
           LSGHLVPKLVEVGALW
Sbjct: 121 LSGHLVPKLVEVGALW 136

[Close]

BLAST of Carg21732 vs. ExPASy TrEMBL
Match: A0A6J1IQM0 (glutaredoxin-C6-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477298 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.2e-64
Identity = 132/137 (96.35%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDD+EIDALAT STSTTA TTTPAVFIGGAF+GGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDKEIDALATCSTSTTA-TTTPAVFIGGAFVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALWV 138
           LSGHLVPKLVEVGALW+
Sbjct: 121 LSGHLVPKLVEVGALWI 136

[Close]

BLAST of Carg21732 vs. ExPASy TrEMBL
Match: A0A6J1IP53 (glutaredoxin-C6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477298 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVALH 120
           HVMKKLLATIGVNPTVIELDD+EIDALAT STSTTA TTTPAVFIGGAF+GGLESLVALH
Sbjct: 61  HVMKKLLATIGVNPTVIELDDKEIDALATCSTSTTA-TTTPAVFIGGAFVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALW 137
           LSGHLVPKLVEVGALW
Sbjct: 121 LSGHLVPKLVEVGALW 135

[Close]

BLAST of Carg21732 vs. ExPASy TrEMBL
Match: A0A5D3D950 (Glutaredoxin-C6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002100 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.0e-56
Identity = 119/138 (86.23%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLSPPPA-SPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCS+DLLHLDLSPPP+ +PS  SLSIDVAESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVFIGGAFIGGLESLVAL 120
           CHVMKKLLATIGV+PTVIEL+D+EI ALA++S++TTA   TPAVFIGGAF+GGLESLVAL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTTTA---TPAVFIGGAFLGGLESLVAL 120

Query: 121 HLSGHLVPKLVEVGALWV 138
           HLSGHLVPKLVEVGALWV
Sbjct: 121 HLSGHLVPKLVEVGALWV 135

[Close]

BLAST of Carg21732 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 7.8e-44
Identity = 96/140 (68.57%), Postives = 110/140 (78.57%), Query Frame = 0


Query: 3   GLRRCSDDLLHLDLSPPPASPSSTSLSIDVAESAETRIRRLISEHPVIIFSRTSCCMCHV 62
           GL+R S+D++ LDL+ PP+  SSTSLSID  ES E +IRRLISEHPVIIFSR+SCCMCHV
Sbjct: 6   GLQRFSNDVVRLDLT-PPSQTSSTSLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHV 65

Query: 63  MKKLLATIGVNPTVIELDDEEIDALAT-----YSTSTTATTTTPAVFIGGAFIGGLESLV 122
           MK+LLATIGV PTVIELDD E+ +L T     YS   +     PAVFIG   +GGLESLV
Sbjct: 66  MKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 138
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of Carg21732 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 2.2e-38
Identity = 89/152 (58.55%), Postives = 108/152 (71.05%), Query Frame = 0


Query: 1   MQGLRRCSDDLLHLDLS---------PPPA------SPSSTSLSIDVAESAETRIRRLIS 60
           M+GLR CS+D + LDL+         PPPA      S +STSLS D  E++E++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLATIGVNPTVIELDDEEIDALATYSTSTTATTTTPAVF 120
           EHPVIIF+R +SCCMCHVMKKLL+T+GV+PTVIE+DD EI  L        A    P +F
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYL--------AVEAAPVLF 123

Query: 121 IGGAFIGGLESLVALHLSGHLVPKLVEVGALW 137
           IGG  +GG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 IGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of Carg21732 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 94.4 bits (233), Expect = 7.8e-20
Identity = 46/104 (44.23%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 39  RIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVNPTVIELDDEEIDALATYSTST---- 98
           R+R ++ E+ VI+  R  CCMCHV+++LL  +GVNP V+E+D+E  D + +   +     
Sbjct: 34  RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQG 93

Query: 99  -TATTTTPAVFIGGAFIGGLESLVALHLSGHLVPKLVEVGALWV 138
              T   PAV++GG   GGL+ ++A H+SG LVP L EVGALW+
Sbjct: 94  GGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137

[Close]

BLAST of Carg21732 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 7.3e-18
Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 39  RIRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVNPTVIELDD----EEID-ALATYSTS 98
           +++++ISE  V+IFS+ SCCM H +K L    GVNPT+ ELD+    +EI+ ALA    S
Sbjct: 3   KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLGCS 62

Query: 99  TTATTTTPAVFIGGAFIGGLESLVALHLSGHLVPKLVEVGALWV 138
                T P VFIGG  +GG   +++LHL+  LVP L  VGALW+
Sbjct: 63  ----PTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Carg21732 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17
Identity = 48/103 (46.60%), Postives = 66/103 (64.08%), Query Frame = 0


Query: 40  IRRLISEHPVIIFSRTSCCMCHVMKKLLATIGVNPTVIELDD----EEID-ALATYSTST 99
           ++++ISE  V+IFS+ SCCM H +K L   +GVNPT+ ELD+    +EI+ ALA    S 
Sbjct: 4   LQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQLGCS- 63

Query: 100 TATTTTPAVFIGGAFIGGLESLVALHLSGHLVPKLVEVGALWV 138
               T P VFIGG  +GG   +++LHL+  LVP L   GALW+
Sbjct: 64  ---PTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

The following BLAST results are available for this feature:

BLAST of Carg21732 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024348.1	2.7e-67	100.00	Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022935887.1	1.4e-66	97.81	glutaredoxin-C6-like isoform X2 [Cucurbita moschata]	[more]
XP_022935886.1	2.3e-66	98.53	glutaredoxin-C6-like isoform X1 [Cucurbita moschata]	[more]
KAG6591467.1	2.3e-66	99.26	Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023536051.1	6.8e-66	98.53	glutaredoxin-C6-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg21732 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	1.1e-42	68.57	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	3.1e-37	58.55	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	9.6e-23	54.90	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q9SGP6	1.1e-18	44.23	Glutaredoxin-C9 OS=Arabidopsis thaliana OX=3702 GN=GRXC9 PE=1 SV=1	[more]
Q7G8Y5	5.5e-18	48.08	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of Carg21732 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6V2	6.6e-67	97.81	glutaredoxin-C6-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE...	[more]
A0A6J1F5Z5	1.1e-66	98.53	glutaredoxin-C6-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442656 PE...	[more]
A0A6J1IQM0	5.2e-64	96.35	glutaredoxin-C6-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477298 PE=3...	[more]
A0A6J1IP53	1.2e-63	97.06	glutaredoxin-C6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477298 PE=3...	[more]
A0A5D3D950	4.0e-56	86.23	Glutaredoxin-C6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134...	[more]

BLAST of Carg21732 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	7.8e-44	68.57	Thioredoxin superfamily protein	[more]
AT5G11930.1	2.2e-38	58.55	Thioredoxin superfamily protein	[more]
AT1G28480.1	7.8e-20	44.23	Thioredoxin superfamily protein	[more]
AT4G15680.1	7.3e-18	47.12	Thioredoxin superfamily protein	[more]
AT4G15700.1	2.1e-17	46.60	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 107..120 score: 36.9 coord: 49..67 score: 35.31 coord: 93..106 score: 37.8
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 49..110 e-value: 6.4E-11 score: 42.3
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 40..137 e-value: 8.7E-37 score: 123.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 5..136
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 30..136 e-value: 8.6E-30 score: 104.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 5..136
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 37..136 score: 21.653227
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 48..128 e-value: 9.47954E-27 score: 93.3732
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 38..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21732-RA	Carg21732-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity