Carg21724 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21724
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Transmembrane protein
Location	Carg_Chr01: 4777023 .. 4778869 (-)
RNA-Seq Expression	Carg21724
Synteny	Carg21724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATCCCGCCTGAAAAACAAACACAAGGAAACTGCGGGAGTGAGGGATTGTCCTCCTCACTGACCCCGACGTTAGGTGAATCAGTCACGATAGAGGGAATTTGTGGGATTGAGATTGATATTCCAATTTTTCTTCTTCGAACGTATTGATTTGACCCCATAAGCAAGACCGCCACCCCATAGCATGTTGCCACCAGAAACAAAACCTCACCAGCTGAAGGAAGGATCTTTGGCATAAAGATACGACCAATCCTGAAAGACCACTCTTTCAATCATCTCGTACATGCATTCTAATTTGATGATATCCATATTTCACAACAACTATAAATTGACATGAACCATGCAATTCATCAACCATATTGTCTAGCCTAGGAATAGGATGTCGATACTTCACAGTAATTTTATTGATGGCTCTACAATCCACGCACATGCGCCAAGTTTCATCTTTCTTTGACACTAATAGGACTCGTATGGAACATGGATTCAAACTTACTCATATATAGCCCTTCTCCAGGAGCTCCTCAACTTGCATTTGAATTTCTTTAGTCTAAGTTGAATTGACTCTGTATGTTGGCTTGTTTGAAATGAGGGCCCTTCGAATCAAATCTATTTTATGTTCAATACCTCTTAAACTATTTTATGTTGATTATTAAGATTATGTTATGGTTTGTAAACGTTCATAGACTCGTAAAATTTAAATATTTTATTTTAGTTTTTGGATTTAAAAGGGTATATTTTAATTATTAATCTTTTCCATAATTCTAAAATATTAAACGCCATTATAAATATAGTTTTGGGTGTTAAATCAAGTTAGCAGCCGTTGCCGCTGCATTAAAGTCCCTCAAATCTCCATTGGAAAAAAATAAAAATAAAAAACCAGCTAAAATTCCGCCATTTTCGACCCTTCCCAATTTCCTTCTCAAGAAATTCCGACCAAATCATCCTCCTCGAGAAAGCTGCAGAGATCGGCGAAGGGATGTCTCGATCTCGAAGCTCCATATCTCTGCAATTCCTCTCTTTCCTTCTCTCCCTCTCTCTCCATTCTCTTTCAGGTACAAATCCACCTTTTCGCTTTTCAAATTCTAAATTCGGTTTTATGTTCTTTGTAACTCTGGTAGCTAGACCGAGTTGAATTTCTTAAATAATTGTAGCTATGATGATTTCTTGTTGCTTTTCTGCTGAAAATATTGTCGCATTGTTTTTTTATTGTAGATTTTAGGGTAACGTTGTTCTGTTCCGTAATGGTTTGGGGAATTACCGTTCTTAGGATTCATGGCATTTTAATTGTAATAAGCAAAATGAATGGTGGAATAGATGATTCGATATTTTGATTGCAATTTCTTGAAAATTACTACAATTTCACGAATTCCCTGTTTACCTTTTTCCTCCCTTTTTGCCGCTTGCTGTATATTTGTGTTTCTTGAGGAGGCATTTGAAATTGTGATGATTTAATTTCTTACGTTTTTGACTTGTGTGAAAATGAAAAACAAGATGAATGTAATTGAATTTGAATGTGTCTTATAATTTAGACCGCGAGTTGTAGTTGGATGGACAAATGATTGTTTGGTTATGGTTTTGGTTTTGTTCTTCTTGTCATTCCAGTGTTGGCAGGTGATCATTCAAGTGCTAAAGATGGTAAAACTAAAAAGCACGATGCTCCGAAGAGTCCATCAACAGGGATCAAGATGCTAATCATATGTCTAGGTGTGGTGACTTTCATTGCGTTCTCTGTGATTCTATTCAAATTATGGCAAAAGAAGAAGAGAGAAGAACAGCATGCCCGTCTTCTCAAGCTGTTTGAAGATGACGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA

mRNA sequence

ATGGGCATCCCGCCTGAAAAACAAACACAAGGAAACTGCGGGAGTGAGGGATTGTCCTCCTCACTGACCCCGACGTTAGGTGAATCAGTCACGATAGAGGGAATTTGTGGGATTGAGATTGATATTCCAATTTTTCTTCTTCGAACAAATTCCGACCAAATCATCCTCCTCGAGAAAGCTGCAGAGATCGGCGAAGGGATGTCTCGATCTCGAAGCTCCATATCTCTGCAATTCCTCTCTTTCCTTCTCTCCCTCTCTCTCCATTCTCTTTCAGTGTTGGCAGGTGATCATTCAAGTGCTAAAGATGGTAAAACTAAAAAGCACGATGCTCCGAAGAGTCCATCAACAGGGATCAAGATGCTAATCATATGTCTAGGTGTGGTGACTTTCATTGCGTTCTCTGTGATTCTATTCAAATTATGGCAAAAGAAGAAGAGAGAAGAACAGCATGCCCGTCTTCTCAAGCTGTTTGAAGATGACGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA

Coding sequence (CDS)

ATGGGCATCCCGCCTGAAAAACAAACACAAGGAAACTGCGGGAGTGAGGGATTGTCCTCCTCACTGACCCCGACGTTAGGTGAATCAGTCACGATAGAGGGAATTTGTGGGATTGAGATTGATATTCCAATTTTTCTTCTTCGAACAAATTCCGACCAAATCATCCTCCTCGAGAAAGCTGCAGAGATCGGCGAAGGGATGTCTCGATCTCGAAGCTCCATATCTCTGCAATTCCTCTCTTTCCTTCTCTCCCTCTCTCTCCATTCTCTTTCAGTGTTGGCAGGTGATCATTCAAGTGCTAAAGATGGTAAAACTAAAAAGCACGATGCTCCGAAGAGTCCATCAACAGGGATCAAGATGCTAATCATATGTCTAGGTGTGGTGACTTTCATTGCGTTCTCTGTGATTCTATTCAAATTATGGCAAAAGAAGAAGAGAGAAGAACAGCATGCCCGTCTTCTCAAGCTGTTTGAAGATGACGATGAACTCGAAGTCGAACTTGGCCTTCGGGATTGA

Protein sequence

MGIPPEKQTQGNCGSEGLSSSLTPTLGESVTIEGICGIEIDIPIFLLRTNSDQIILLEKAAEIGEGMSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

Homology

[Close]

BLAST of Carg21724 vs. NCBI nr
Match: KAG7037155.1 (hypothetical protein SDJN02_00777, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325.5 bits (833), Expect = 2.8e-85
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MGIPPEKQTQGNCGSEGLSSSLTPTLGESVTIEGICGIEIDIPIFLLRTNSDQIILLEKA 60
           MGIPPEKQTQGNCGSEGLSSSLTPTLGESVTIEGICGIEIDIPIFLLRTNSDQIILLEKA
Sbjct: 1   MGIPPEKQTQGNCGSEGLSSSLTPTLGESVTIEGICGIEIDIPIFLLRTNSDQIILLEKA 60

Query: 61  AEIGEGMSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKM 120
           AEIGEGMSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKM
Sbjct: 61  AEIGEGMSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKM 120

Query: 121 LIICLGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           LIICLGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 121 LIICLGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 171

[Close]

BLAST of Carg21724 vs. NCBI nr
Match: KAG6607498.1 (hypothetical protein SDJN03_00840, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197.2 bits (500), Expect = 1.1e-46
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 67  MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG 126
           MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG
Sbjct: 1   MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG 60

Query: 127 VVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           VVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  VVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 105

[Close]

BLAST of Carg21724 vs. NCBI nr
Match: XP_023525282.1 (uncharacterized protein LOC111788931 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.4 bits (490), Expect = 1.7e-45
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 67  MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG 126
           MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKK DAPKSPSTGIKMLIICLG
Sbjct: 1   MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKPDAPKSPSTGIKMLIICLG 60

Query: 127 VVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           VVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  VVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 105

[Close]

BLAST of Carg21724 vs. NCBI nr
Match: XP_022949107.1 (uncharacterized protein LOC111452561 [Cucurbita moschata])

HSP 1 Score: 192.2 bits (487), Expect = 3.7e-45
Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 67  MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG 126
           MSRSRSSISLQ LSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG
Sbjct: 1   MSRSRSSISLQVLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG 60

Query: 127 VVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           VVTFIAF VILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  VVTFIAFYVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 105

[Close]

BLAST of Carg21724 vs. NCBI nr
Match: KAG6592381.1 (hypothetical protein SDJN03_14727, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.4 bits (433), Expect = 6.7e-39
Identity = 96/127 (75.59%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 47  LRTNSDQIILLEKAAEIGEGMSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAK--DGK 106
           L  N +Q ILL+  AEIGEGMSRS+SS SLQFLSFL SLSLHSLSVLA +HSSA+  DGK
Sbjct: 518 LLINPNQFILLQDLAEIGEGMSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGK 577

Query: 107 TKKHDAPKSPSTGIKMLIICLGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELE 166
            KK D  +S S GIK+++ICLGVVT IAFSVIL K+WQ+KKREEQHARLLKLFEDDDELE
Sbjct: 578 AKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELE 637

Query: 167 VELGLRD 172
           +ELGLRD
Sbjct: 638 LELGLRD 644

[Close]

BLAST of Carg21724 vs. ExPASy TrEMBL
Match: A0A6J1GB46 (uncharacterized protein LOC111452561 OS=Cucurbita moschata OX=3662 GN=LOC111452561 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.8e-45
Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 67  MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG 126
           MSRSRSSISLQ LSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG
Sbjct: 1   MSRSRSSISLQVLSFLLSLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLG 60

Query: 127 VVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           VVTFIAF VILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  VVTFIAFYVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 105

[Close]

BLAST of Carg21724 vs. ExPASy TrEMBL
Match: A0A5A7TC90 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00300 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.6e-33
Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 67  MSRSRSSISLQFLSFLLS-LSLHSLSVLAGDHSSAKD-GKTKKHDAPKSPSTGIKMLIIC 126
           MS S+SS SLQFL FL + + LHSLSVLA D+SSAKD GKTKK D  +SPS GIK+LIIC
Sbjct: 1   MSGSQSSRSLQFLFFLFNFIFLHSLSVLANDNSSAKDGGKTKKDDVRRSPSMGIKILIIC 60

Query: 127 LGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           LGVVT IAFSVILFK+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  LGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of Carg21724 vs. ExPASy TrEMBL
Match: A0A1S3CA76 (uncharacterized protein LOC103498710 OS=Cucumis melo OX=3656 GN=LOC103498710 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 4.6e-33
Identity = 87/107 (81.31%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 67  MSRSRSSISLQFLSFLLS-LSLHSLSVLAGDHSSAKD-GKTKKHDAPKSPSTGIKMLIIC 126
           MS S+SS SLQFL FL + + LHSLSVLA D+SSAKD GKTKK D  +SPS GIK+LIIC
Sbjct: 1   MSGSQSSRSLQFLFFLFNFIFLHSLSVLANDNSSAKDGGKTKKDDVRRSPSMGIKILIIC 60

Query: 127 LGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           LGVVT IAFSVILFK+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 61  LGVVTVIAFSVILFKIWQKKKREEQHARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of Carg21724 vs. ExPASy TrEMBL
Match: A0A6J1EBZ0 (uncharacterized protein LOC111432678 OS=Cucurbita moschata OX=3662 GN=LOC111432678 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.0e-32
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 67  MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAK--DGKTKKHDAPKSPSTGIKMLIIC 126
           MSRS+SS SLQFLSFL SLSLHSLSVLA +HSSA+  DGK KK D  +S S GIK+++IC
Sbjct: 1   MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLIC 60

Query: 127 LGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           LGVVT IAFSVIL K+WQ+KKREEQHARLLKLFEDDDELE+ELGLRD
Sbjct: 61  LGVVTVIAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 107

[Close]

BLAST of Carg21724 vs. ExPASy TrEMBL
Match: A0A6J1ICT0 (uncharacterized protein LOC111472607 OS=Cucurbita maxima OX=3661 GN=LOC111472607 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.7e-32
Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 67  MSRSRSSISLQFLSFLLSLSLHSLSVLAGDHSSAK--DGKTKKHDAPKSPSTGIKMLIIC 126
           MSRS+SS SLQFLSFL SLSLHSLSVLA +HSSA+  DGK KK D  +S S GIK+++IC
Sbjct: 1   MSRSQSSRSLQFLSFLFSLSLHSLSVLADEHSSAEHGDGKAKKGDGWRSRSMGIKIVLIC 60

Query: 127 LGVVTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           LGVVT +AFSVIL K+WQ+KKREEQHARLLKLFEDDDELE+ELGLRD
Sbjct: 61  LGVVTVLAFSVILCKIWQRKKREEQHARLLKLFEDDDELELELGLRD 107

[Close]

BLAST of Carg21724 vs. TAIR 10
Match: AT1G09645.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G57765.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 51/99 (51.52%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 74  ISLQFLSFLLSLSLHSLSVLAGDHSSAKDG-KTKKHDAPKSPSTGIKMLIICLGVVTFIA 133
           +S + L F  S+ L     L+GD  +   G KT+ H +  S  TG K++++ +G V    
Sbjct: 10  LSWRRLLFFASIGLQFFLGLSGDSKNTNAGVKTESHTS--SSKTGTKVILVLVGFVAVAM 69

Query: 134 FSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
           FS  L+KLWQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Sbjct: 70  FSFFLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 106

[Close]

BLAST of Carg21724 vs. TAIR 10
Match: AT1G57765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 7.7e-17
Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 0


Query: 70  SRSSISLQFLSFLL--SLSLHSLSVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLGV 129
           S S+I+L +   LL  S+ LH    ++GD +S+  G  K      S  TG K++ I LG 
Sbjct: 5   SISTITLSWSHLLLCASICLHFFLGISGDPNSSSTG-AKAESHTSSSKTGTKVIFILLGF 64

Query: 130 VTFIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
                 S  L+KLWQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Sbjct: 65  GAVAGLSFFLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 107

[Close]

BLAST of Carg21724 vs. TAIR 10
Match: AT1G57765.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1). )

HSP 1 Score: 82.0 bits (201), Expect = 5.0e-16
Identity = 53/101 (52.48%), Postives = 65/101 (64.36%), Query Frame = 0


Query: 72  SSISLQFLSFLLSLSLHSL-SVLAGDHSSAKDGKTKKHDAPKSPSTGIKMLIICLGVVTF 131
           +SI L F  FL  L L S+   ++GD +S+  G  K      S  TG K++ I LG    
Sbjct: 20  ASICLHF--FLAMLYLDSVYQCISGDPNSSSTG-AKAESHTSSSKTGTKVIFILLGFGAV 79

Query: 132 IAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 172
              S  L+KLWQKKKR+EQ+ARLLKLFE+DDELEVELGLRD
Sbjct: 80  AGLSFFLYKLWQKKKRDEQYARLLKLFEEDDELEVELGLRD 117

[Close]

BLAST of Carg21724 vs. TAIR 10
Match: AT3G53490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-07
Identity = 29/73 (39.73%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 99  SAKDGKTKKHDAPKSPSTGIKMLIICLGVVTFIAFSVILFKLWQKKKREEQHARLLKLFE 158
           S K+  T+K +       GI +LI+ L +       ++ +K W+KKKR+++ AR LKLFE
Sbjct: 151 SNKESGTEKEEQKGGMHPGIVVLIVVLLLGVVAVGLLVGYKYWRKKKRQQEQARFLKLFE 210

Query: 159 DDDELEVELGLRD 172
           D D++E ELGL +
Sbjct: 211 DGDDIEDELGLEN 223

The following BLAST results are available for this feature:

BLAST of Carg21724 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037155.1	2.8e-85	100.00	hypothetical protein SDJN02_00777, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6607498.1	1.1e-46	100.00	hypothetical protein SDJN03_00840, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023525282.1	1.7e-45	99.05	uncharacterized protein LOC111788931 [Cucurbita pepo subsp. pepo]	[more]
XP_022949107.1	3.7e-45	98.10	uncharacterized protein LOC111452561 [Cucurbita moschata]	[more]
KAG6592381.1	6.7e-39	75.59	hypothetical protein SDJN03_14727, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Carg21724 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GB46	1.8e-45	98.10	uncharacterized protein LOC111452561 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A5A7TC90	4.6e-33	81.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3CA76	4.6e-33	81.31	uncharacterized protein LOC103498710 OS=Cucumis melo OX=3656 GN=LOC103498710 PE=...	[more]
A0A6J1EBZ0	1.0e-32	78.50	uncharacterized protein LOC111432678 OS=Cucurbita moschata OX=3662 GN=LOC1114326...	[more]
A0A6J1ICT0	1.7e-32	77.57	uncharacterized protein LOC111472607 OS=Cucurbita maxima OX=3661 GN=LOC111472607...	[more]

BLAST of Carg21724 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09645.1	1.6e-17	51.52	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G57765.1	7.7e-17	50.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G57765.2	5.0e-16	52.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53490.1	2.5e-07	39.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33780:SF2	OS05G0419600 PROTEIN	coord: 69..171
None	No IPR available	PANTHER	PTHR33780	EXPRESSED PROTEIN	coord: 69..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21724-RA	Carg21724-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006414	translational elongation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003746	translation elongation factor activity