Carg21701 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21701
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	heparanase-like protein 1
Location	Carg_Chr01: 4567628 .. 4571892 (+)
RNA-Seq Expression	Carg21701
Synteny	Carg21701

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGATTCATACTCCATAATCGTATAATATCTTGGAAATTCAGTATGAACTAGTAGAAAGTAGAAGAAAAAGTAGTGGGAAATGGAAATCTCTGGTTTTATTTGAGATCGAGGGATGAAACTTATTTGCTTTCTTTCGGTGGGTAATCACTCTTTGAGAGCGACCGTTCAAGCGCGAACCATCACGGATTGCGTTTAATACCCCCATAAGATAAGACCCATCACCCACCGATCGTAATCTCTTACCGAAAACCCACGTCAACACTCTCGAAGATCAAGAACAAGAAGCTACCCGTCTCAGAAACGCAAGGATTTGGTGATTTGGTGATTTGGTGAAGGTTCTTTCCCTTTACTTTGAATCTTTACTTTTCTTCTAATCCATTTCATCAACATTCTGGAATCGTGTTATATTACTATTAAATAACTATAGCTATGATCCTGTGACTGGTTTTTGACTAAAAAGATGCCCATCTTTTAGTGTTCGTCGTTTTGCACACATACCCTTTAGAAATTTGTGTTTAGTTTGATTGTTCTGCTTATTTATATTGGAACTGTTTGCCTGGACAGCTATATCAATGGCTGAACCATTGCGTGCAACTTGGTTTTCCTAGCTGTGGAGTCGTCTAAAGTCCAAGATAGGAATAGAAAAGTCTGGTGGTTTAGCTAAAAATTCTTGACGTCAGACTGTGGAAATCGGCTTCAGAGGCCATCTCCATTTCATTTTCTTGCATTATTGACGAAATGTCTCGAAATTGAGGTGGGTTTCTATCTGTTTTGGTGTTTTTTTTTTCTGGATTCCTTAGGATTTTCTTTTTGTCAATGATTTTTATCAAATGGGATCTGGAAATGTGAGCATTAAGATTAGTTAGTATTATTGTACGTTTAGTGTAGCAATATGAAGGCATTGCTTGTTTGTTTTTCCTGTAATTGTTTGGAAAATCCTGGTGGGTGTGGAAATAAGTGAGCGCATTCCTAGGAAAACCCGAAAATTCTGTATTAATAAGATCATAACATTCTGGATAAACATATGATTTCTTAAATGATCCTTAATTAGTGCTTGTGTTTGGTCAAAATGACTCTCAATTTCTTGATAGCTTGAACTATGAGATTTCTGCTTCTTTTTTGGACTAATTTTTCGAAGTTTAGATGTTCTTATCTGTTTCCTGTTCTTTTTCAGTCGACAATGATTTGTTGAGCTGGTGAGGGACTATCGATTACCCGAACAATGGATATCAGATTCTCCTTGCTTTTCTTTGTAGTTTCTGTATCTGCTATTTGGGCTCAAGACATAGAACATGCTAGAATTTTGATCAATGCTAATGAAAAAGTTGCAGAAACTGACTATAATTTCATCTGTGCTACCATTGATTGGTGGCCTCATGATAAGTGTGATTACAACCACTGTTCATGGGGGTACTCGTCGGTCATCAATTTGGTATGAATTGTCGAAGAACATTGTGCTACTTAAGCATATTTGTTGGATTTCGATTTTCGGTAAATGACGTTTCGATTTTCTTATGCAGAACCTATCTCATCCTCTTTTTGCCAAGGCAATTCAAGGTTTGTGTCTGATCTTTGAACTGGACACTATTGATTATTTCTTGCTTCAAATAGTACTGATCTTATTACTCTTCTGGAAAGCAGCTTTCCACAATTTAAGGATAAGAATAGGCGGCTCTTTACAAGACCAGGTATTGTATGATGTCGGAAGCTTGAAAGTCCCGTGCCGTCCATTTCAAAAGATAAGCTCCGGGTTATTTGGTTTTTCTAAAGGATGTTTACACATGAATAGGTGGGATGAACTAAACCATTTATTCACCAGGACAGGGTAAGGTTTGTTTCATTTTGCATCCTTATGTTCCTTACCTGTTCGTTTAAATTGTTTCGATCGAAGTTAAATGTCCTTCTCAATCACTTACTACTTCGAGGAATCGTATGCTTACAGAGGAGTTACTTTCTTAATGCTTAGATGAAATGATATCGTACAAATGTTTTATATATAGCGGAATCGTTCGATTATGTGCTTTTGCGTCTTGCTGTTTGCTAATATCTTATTCTTTCAGAGCCATTGTGACATTTGGCTTGAACGCGCTTCATGGGAGGCACAAGATCGGTAAAATTCAGTGGGGAGGAAATTGGGACTCGAGTAATGCTCGTGATTTTATGAAATACACCATTTCTAAGGGATATGCGATAGATTCGTGGGAATTTGGTATATGCTGTCGACTGTCTACACTGTTTTTATGAAGTTTGTTACTCCAAGCTAAACTTTAATAACTTCTTGCCATTGAAGGTAATGAACTGAGTGGAAGCGGTGTAGGCGCTAGTGTTGCTGCTGAACAGTACGGAAAAGACCTGATCCAACTCAGGAGCATCATCGACGAGCTGTACCGTGATTCCAGCTCAAAACCATCACTTATAGCACCGGGAGGATTCTATGAGCAGAATTGGTATGCAAAACTTCTCCAGGTTTCGGGATCAAATGTAGTCAATGTCGTCACACATCATCTGTATAACTTGGGTCCAGGTGTGCTATCTTTTCTTTTCTTTCTTTTTAATTATACTTATCTTATGATAAAGGTTAGCTTCTTGATGATGAGGCTATAAAATTTTATAATACTCACCTTTTGCGTGTTACCCGTTGGAAAGTTAACGAGCTTTGTTTAAGTATTTTCAAAACCTGAATCCCGATCACAACGTGCGTTCTGAACTCATGAATTTCTCCGTTTCGTTTCGTATCTTGTTCTCTGCACTCCAGGAGTTGATCCCAATCTAGCGAAAAAGATTTTGGATCCCCTACACCTCAGCAGAGTATCAGAAACATTCAGTAAACTTGATCAAACCATCAAAACATATGGTCCATGGGCTTCTGCCTGGGTTGGGGAATCTGGAGGCGCCTACAACAGCGGTGGCCGTGATGTATCGAACAGATTTATCAACAGCTTTTGGTAATTTTCGGTATCAACTAGTTTTTCCAACTTCTGATTTTGTTTTCCTGAAAAGCGAGTCACTTGATTCGTCACGTAGGTACCTAGATCAGTTGGGTATGGCAGCCAAGTATCGAACGAAAGTCTACTGTAGACAATCATTAATTGGTGGAAATTATGGTCTTCTAAGCACCGGCACGTTCGTACCGAATCCTGATTTTTACAGGCAAGAATATATAGAAATCGAGATCTTCTCTTTTGTTTTTCAAAGCCTGGTCTGACCCTGAAACAATCTTGTTTTAATGAATAGTGCACTTCTATGGCATCGGCTTATGGGTACTGGTGTTCTTGCTGTCAATAGTGATGCATCTCCCTTCTTGCGCTCTTATGCTCATTGCTCAAAAGAAAGGGTTAGACTTCACTACTTTTCTCTATCTCCCATTTGTTTGGAATCCTAGCTAGAGATTAACATGAAAATCTGTGCATGAAACGTCGTGGTCTCTTCTAGATCTGTCTTAAGATAGATAAACTTAAATAGGCGACGTGGTGTTTTCCTATCTCGATTGTAAGTCATGGTTGATATCGACTTGTTGCAGGCTGGTATAACTGCATTGTTCATCAATTTAAGCAATCAGACACGCTTTGTAGTGAGCGTTCGGAACACGTTGACTGTCGAGGTGAGAAAGATATACAAAAGGAACTCTTTCATGCAAGGTATTAAGAGAACAGTAAGTTGGGTTGGAAACAAGGCATCAGATTTGTCCATATCAAGAGAGGAGTATCACTTGACACCAAAAGATGGTTATCTTCAAAGCCAGACCATGGTTCTAAATGGTGTCCCATTAGAGCTAACTGAAGATGGAAGCATTCCACAACTCAACCCTGTTCTTGTTGATGTGAATTCTCCAATACTCATAGCTCCATTGTCCATTGCTTTCATAGTGTTCCCTAATTTTGAAGCTCCAACTTGCAAATGATCAGTGAAGGCCTCCTTTTTCTTCTTCTCTGTTGCACAGTTTTCAAGTTTGTATTGTCAATCTGTAACTTATGCATAATTTGTGTGCCACTACCAATCCCTTCCTTGGTTATTGGGGTCGAGCTATTACCTGTTCTTGTAGAAATTTCAAGTCATCTCTCTGAGTTAGATTGAATCTTTCTTAGCCTCTTCTTGTTGTCCCCTACTCGTTTTTGGACTGGGTTAGAGGCCCTACTCATATTTATTAATTATATTTTTATTTACTTATTTGTGAAAACACTTCGTGTAATAGCAAATTTTATCAGATGGGAAAACATAATAATCTAACATGTATCGAGAATAAATTTGTTTCGGATATTTTTT

mRNA sequence

TCAGATTCATACTCCATAATCGTATAATATCTTGGAAATTCAGTATGAACTAGTAGAAAGTAGAAGAAAAAGTAGTGGGAAATGGAAATCTCTGGTTTTATTTGAGATCGAGGGATGAAACTTATTTGCTTTCTTTCGGTGGGTAATCACTCTTTGAGAGCGACCGTTCAAGCGCGAACCATCACGGATTGCGTTTAATACCCCCATAAGATAAGACCCATCACCCACCGATCGTAATCTCTTACCGAAAACCCACGTCAACACTCTCGAAGATCAAGAACAAGAAGCTACCCGTCTCAGAAACGCAAGGATTTGGTGATTTGGTGATTTGGTGAAGCTATATCAATGGCTGAACCATTGCGTGCAACTTGGTTTTCCTAGCTGTGGAGTCGTCTAAAGTCCAAGATAGGAATAGAAAAGTCTGGTGGTTTAGCTAAAAATTCTTGACGTCAGACTGTGGAAATCGGCTTCAGAGGCCATCTCCATTTCATTTTCTTGCATTATTGACGAAATGTCTCGAAATTGAGGTGGGTTTCTATCTGTTTTGGTGTTTTTTTTTTCTGGATTCCTTAGGATTTTCTTTTTGTCAATGATTTTTATCAAATGGGATCTGGAAATGTGAGCATTAAGATTAGTTAGTATTATTGTACGTTTAGTGTAGCAATATGAAGGCATTGCTTGTTTGTTTTTCCTGTAATTGTTTGGAAAATCCTGGTGGGTGTGGAAATAAGTGAGCGCATTCCTAGGAAAACCCGAAAATTCTGTATTAATAAGATCATAACATTCTGGATAAACATATGATTTCTTAAATGATCCTTAATTAGTGCTTGTGTTTGGTCAAAATGACTCTCAATTTCTTGATAGCTTGAACTATGAGATTTCTGCTTCTTTTTTGGACTAATTTTTCGAAGTTTAGATGTTCTTATCTGTTTCCTGTTCTTTTTCAGTCGACAATGATTTGTTGAGCTGGTGAGGGACTATCGATTACCCGAACAATGGATATCAGATTCTCCTTGCTTTTCTTTGTAGTTTCTGTATCTGCTATTTGGGCTCAAGACATAGAACATGCTAGAATTTTGATCAATGCTAATGAAAAAGTTGCAGAAACTGACTATAATTTCATCTGTGCTACCATTGATTGGTGGCCTCATGATAAGTGTGATTACAACCACTGTTCATGGGGGTACTCGTCGGTCATCAATTTGAACCTATCTCATCCTCTTTTTGCCAAGGCAATTCAAGGCTGGTATAACTGCATTGTTCATCAATTTAAGCAATCAGACACGCTTTGTAGTGAGCGTTCGGAACACGTTGACTGTCGAGGTGAGAAAGATATACAAAAGGAACTCTTTCATGCAAGGTATTAAGAGAACAGTAAGTTGGGTTGGAAACAAGGCATCAGATTTGTCCATATCAAGAGAGGAGTATCACTTGACACCAAAAGATGGTTATCTTCAAAGCCAGACCATGGTTCTAAATGGTGTCCCATTAGAGCTAACTGAAGATGGAAGCATTCCACAACTCAACCCTGTTCTTGTTGATGTGAATTCTCCAATACTCATAGCTCCATTGTCCATTGCTTTCATAGTGTTCCCTAATTTTGAAGCTCCAACTTGCAAATGATCAGTGAAGGCCTCCTTTTTCTTCTTCTCTGTTGCACAGTTTTCAAGTTTGTATTGTCAATCTGTAACTTATGCATAATTTGTGTGCCACTACCAATCCCTTCCTTGGTTATTGGGGTCGAGCTATTACCTGTTCTTGTAGAAATTTCAAGTCATCTCTCTGAGTTAGATTGAATCTTTCTTAGCCTCTTCTTGTTGTCCCCTACTCGTTTTTGGACTGGGTTAGAGGCCCTACTCATATTTATTAATTATATTTTTATTTACTTATTTGTGAAAACACTTCGTGTAATAGCAAATTTTATCAGATGGGAAAACATAATAATCTAACATGTATCGAGAATAAATTTGTTTCGGATATTTTTT

Coding sequence (CDS)

ATGGATATCAGATTCTCCTTGCTTTTCTTTGTAGTTTCTGTATCTGCTATTTGGGCTCAAGACATAGAACATGCTAGAATTTTGATCAATGCTAATGAAAAAGTTGCAGAAACTGACTATAATTTCATCTGTGCTACCATTGATTGGTGGCCTCATGATAAGTGTGATTACAACCACTGTTCATGGGGGTACTCGTCGGTCATCAATTTGAACCTATCTCATCCTCTTTTTGCCAAGGCAATTCAAGGCTGGTATAACTGCATTGTTCATCAATTTAAGCAATCAGACACGCTTTGTAGTGAGCGTTCGGAACACGTTGACTGTCGAGGTGAGAAAGATATACAAAAGGAACTCTTTCATGCAAGGTATTAA

Protein sequence

MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLSHPLFAKAIQGWYNCIVHQFKQSDTLCSERSEHVDCRGEKDIQKELFHARY

Homology

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BLAST of Carg21701 vs. NCBI nr
Match: KAG7037132.1 (Heparanase-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.5 bits (685), Expect = 2.9e-68
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
           MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC
Sbjct: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60

Query: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVHQFKQSDTLCSERSEHVDCRGEKDIQKELFH 120
           SWGYSSVINLNLSHPLFAKAIQGWYNCIVHQFKQSDTLCSERSEHVDCRGEKDIQKELFH
Sbjct: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVHQFKQSDTLCSERSEHVDCRGEKDIQKELFH 120

Query: 121 ARY 124
           ARY
Sbjct: 121 ARY 123

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BLAST of Carg21701 vs. NCBI nr
Match: XP_022949131.1 (heparanase-like protein 1 [Cucurbita moschata] >XP_022949132.1 heparanase-like protein 1 [Cucurbita moschata] >XP_022949133.1 heparanase-like protein 1 [Cucurbita moschata] >XP_022949134.1 heparanase-like protein 1 [Cucurbita moschata] >XP_022949135.1 heparanase-like protein 1 [Cucurbita moschata] >XP_022949136.1 heparanase-like protein 1 [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 5.5e-43
Identity = 92/121 (76.03%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
           MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC
Sbjct: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60

Query: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVH--QFKQSDTLCSERSEHVDCRGEKDIQKEL 120
           SWGYSSVINLNLSHPLFAKAIQ ++N  +      Q   L    S  V CR  + I   L
Sbjct: 61  SWGYSSVINLNLSHPLFAKAIQAFHNLRIRIGGSLQDQVLYDVGSLKVPCRPFQKISSGL 120

[Close]

BLAST of Carg21701 vs. NCBI nr
Match: KAG6607476.1 (Heparanase-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184.5 bits (467), Expect = 5.5e-43
Identity = 92/121 (76.03%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
           MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC
Sbjct: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60

Query: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVH--QFKQSDTLCSERSEHVDCRGEKDIQKEL 120
           SWGYSSVINLNLSHPLFAKAIQ ++N  +      Q   L    S  V CR  + I   L
Sbjct: 61  SWGYSSVINLNLSHPLFAKAIQAFHNLRIRIGGSLQDQVLYDVGSLKVPCRPFQKISSGL 120

[Close]

BLAST of Carg21701 vs. NCBI nr
Match: XP_023523333.1 (heparanase-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023523334.1 heparanase-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.2 bits (461), Expect = 2.7e-42
Identity = 90/121 (74.38%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
           MDIRFSLLFFVVSVSAIWAQDIEHA+I+INANEKVAETDYNFICATIDWWPHDKCDYNHC
Sbjct: 1   MDIRFSLLFFVVSVSAIWAQDIEHAKIVINANEKVAETDYNFICATIDWWPHDKCDYNHC 60

Query: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVH--QFKQSDTLCSERSEHVDCRGEKDIQKEL 120
           SWGYSSVINLNLSHPLFAKAIQ ++N  +      Q   L    S  V CR  + I   L
Sbjct: 61  SWGYSSVINLNLSHPLFAKAIQAFHNLRIRIGGSLQDQVLYDVGSLKVPCRPFQKISSGL 120

[Close]

BLAST of Carg21701 vs. NCBI nr
Match: XP_022998125.1 (heparanase-like protein 1 [Cucurbita maxima] >XP_022998126.1 heparanase-like protein 1 [Cucurbita maxima] >XP_022998127.1 heparanase-like protein 1 [Cucurbita maxima] >XP_022998128.1 heparanase-like protein 1 [Cucurbita maxima] >XP_022998129.1 heparanase-like protein 1 [Cucurbita maxima])

HSP 1 Score: 180.3 bits (456), Expect = 1.0e-41
Identity = 89/121 (73.55%), Postives = 95/121 (78.51%), Query Frame = 0


Query: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
           MDIRFSLLFFVVSVSAIWAQ +EHARI+INANEKVAETDYNFICATIDWWPHDKCDYNHC
Sbjct: 1   MDIRFSLLFFVVSVSAIWAQHVEHARIVINANEKVAETDYNFICATIDWWPHDKCDYNHC 60

Query: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVH--QFKQSDTLCSERSEHVDCRGEKDIQKEL 120
           SWGYSSVINLNLSHPLFAKAIQ ++N  +      Q   L    S  V CR  + I   L
Sbjct: 61  SWGYSSVINLNLSHPLFAKAIQAFHNLRIRIGGSLQDQVLYDVGSLKVPCRPFQKISSGL 120

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BLAST of Carg21701 vs. ExPASy Swiss-Prot
Match: Q9FF10 (Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 8.9e-20
Identity = 38/66 (57.58%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 19 AQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLSHPLFA 78
          AQ+++ A I+I    +V ETD NF+CAT+DWWPHDKC+Y+ C WGYSSVIN++L+ PL  
Sbjct: 24 AQEMKRASIVIQGARRVCETDENFVCATLDWWPHDKCNYDQCPWGYSSVINMDLTRPLLT 83

Query: 79 KAIQGW 85
          KAI+ +
Sbjct: 84 KAIKAF 89

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BLAST of Carg21701 vs. ExPASy Swiss-Prot
Match: Q8L608 (Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.9e-19
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 18 WAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLSHPLF 77
          +  ++E   ++I+ + ++AETD NFICAT+DWWP +KC+Y+ C WGY+S+INLNL+ PL 
Sbjct: 20 FGSNMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLL 79

Query: 78 AKAIQGW 85
          AKAIQ +
Sbjct: 80 AKAIQAF 86

[Close]

BLAST of Carg21701 vs. ExPASy Swiss-Prot
Match: Q9FZP1 (Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-11
Identity = 25/62 (40.32%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 23 EHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLSHPLFAKAIQ 82
          E+  + +     V   D +FICAT+DWWP +KCDY  CSW ++S++NL+L++ +   AI+
Sbjct: 29 ENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLNNVILQNAIK 88

Query: 83 GW 85
           +
Sbjct: 89 AF 90

[Close]

BLAST of Carg21701 vs. ExPASy Swiss-Prot
Match: Q9LRC8 (Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis OX=65409 GN=SGUS PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-09
Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 5  FSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGY 64
          FSL+F    +        E   I+      VA+TD N++CAT+D WP  KC+Y +C WG 
Sbjct: 15 FSLIFICGVIG-------EETTIVKIEENPVAQTDENYVCATLDLWPPTKCNYGNCPWGK 74

Query: 65 SSVINLNLSHPLFAKAIQ 83
          SS +NL+L++ +   A++
Sbjct: 75 SSFLNLDLNNNIIRNAVK 85

[Close]

BLAST of Carg21701 vs. ExPASy TrEMBL
Match: A0A6J1GB71 (heparanase-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111452576 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.7e-43
Identity = 92/121 (76.03%), Postives = 96/121 (79.34%), Query Frame = 0


Query: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
           MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC
Sbjct: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60

Query: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVH--QFKQSDTLCSERSEHVDCRGEKDIQKEL 120
           SWGYSSVINLNLSHPLFAKAIQ ++N  +      Q   L    S  V CR  + I   L
Sbjct: 61  SWGYSSVINLNLSHPLFAKAIQAFHNLRIRIGGSLQDQVLYDVGSLKVPCRPFQKISSGL 120

[Close]

BLAST of Carg21701 vs. ExPASy TrEMBL
Match: A0A6J1K9E1 (heparanase-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492865 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.0e-42
Identity = 89/121 (73.55%), Postives = 95/121 (78.51%), Query Frame = 0


Query: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
           MDIRFSLLFFVVSVSAIWAQ +EHARI+INANEKVAETDYNFICATIDWWPHDKCDYNHC
Sbjct: 1   MDIRFSLLFFVVSVSAIWAQHVEHARIVINANEKVAETDYNFICATIDWWPHDKCDYNHC 60

Query: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVH--QFKQSDTLCSERSEHVDCRGEKDIQKEL 120
           SWGYSSVINLNLSHPLFAKAIQ ++N  +      Q   L    S  V CR  + I   L
Sbjct: 61  SWGYSSVINLNLSHPLFAKAIQAFHNLRIRIGGSLQDQVLYDVGSLKVPCRPFQKISSGL 120

[Close]

BLAST of Carg21701 vs. ExPASy TrEMBL
Match: A0A1S3BH81 (heparanase-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103489677 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.4e-36
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 1  MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
          MD+RF LL  VVS+ AIWAQDIEHARI+INANEKVAETDYNFICAT+DWWPHDKCDYN C
Sbjct: 1  MDVRFFLLLLVVSLPAIWAQDIEHARIIINANEKVAETDYNFICATLDWWPHDKCDYNQC 60

Query: 61 SWGYSSVINLNLSHPLFAKAIQGWYN 87
           WGYSSVINLNLSHPL +KAIQ ++N
Sbjct: 61 PWGYSSVINLNLSHPLLSKAIQAFHN 86

[Close]

BLAST of Carg21701 vs. ExPASy TrEMBL
Match: A0A5D3BL66 (Heparanase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G001150 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.4e-36
Identity = 71/86 (82.56%), Postives = 78/86 (90.70%), Query Frame = 0


Query: 1  MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
          MD+RF LL  VVS+ AIWAQDIEHARI+INANEKVAETDYNFICAT+DWWPHDKCDYN C
Sbjct: 1  MDVRFFLLLLVVSLPAIWAQDIEHARIIINANEKVAETDYNFICATLDWWPHDKCDYNQC 60

Query: 61 SWGYSSVINLNLSHPLFAKAIQGWYN 87
           WGYSSVINLNLSHPL +KAIQ ++N
Sbjct: 61 PWGYSSVINLNLSHPLLSKAIQAFHN 86

[Close]

BLAST of Carg21701 vs. ExPASy TrEMBL
Match: A0A0A0LVK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038980 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.4e-36
Identity = 78/121 (64.46%), Postives = 87/121 (71.90%), Query Frame = 0


Query: 1   MDIRFSLLFFVVSVSAIWAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHC 60
           MD+R  LL  VVS+ AIWAQDIEHARI+INANEKVAETDYNFICAT+DWWPHDKCDYN C
Sbjct: 1   MDVRSFLLLLVVSLPAIWAQDIEHARIIINANEKVAETDYNFICATLDWWPHDKCDYNQC 60

Query: 61  SWGYSSVINLNLSHPLFAKAIQGWYNCIVH--QFKQSDTLCSERSEHVDCRGEKDIQKEL 120
            WGYSSVINLNLSHPL +KAIQ ++N  +      Q   L    S    CR  + I   L
Sbjct: 61  PWGYSSVINLNLSHPLLSKAIQAFHNLRIRIGGSLQDQVLYDVESLKTPCRPFQKISSGL 120

[Close]

BLAST of Carg21701 vs. TAIR 10
Match: AT5G07830.1 (glucuronidase 2 )

HSP 1 Score: 97.8 bits (242), Expect = 6.3e-21
Identity = 38/66 (57.58%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 19 AQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLSHPLFA 78
          AQ+++ A I+I    +V ETD NF+CAT+DWWPHDKC+Y+ C WGYSSVIN++L+ PL  
Sbjct: 24 AQEMKRASIVIQGARRVCETDENFVCATLDWWPHDKCNYDQCPWGYSSVINMDLTRPLLT 83

Query: 79 KAIQGW 85
          KAI+ +
Sbjct: 84 KAIKAF 89

[Close]

BLAST of Carg21701 vs. TAIR 10
Match: AT5G61250.2 (glucuronidase 1 )

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-20
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 18 WAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLSHPLF 77
          +  ++E   ++I+ + ++AETD NFICAT+DWWP +KC+Y+ C WGY+S+INLNL+ PL 
Sbjct: 20 FGSNMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLL 79

Query: 78 AKAIQGW 85
          AKAIQ +
Sbjct: 80 AKAIQAF 86

[Close]

BLAST of Carg21701 vs. TAIR 10
Match: AT5G61250.1 (glucuronidase 1 )

HSP 1 Score: 94.4 bits (233), Expect = 7.0e-20
Identity = 36/67 (53.73%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 18 WAQDIEHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLSHPLF 77
          +  ++E   ++I+ + ++AETD NFICAT+DWWP +KC+Y+ C WGY+S+INLNL+ PL 
Sbjct: 20 FGSNMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLL 79

Query: 78 AKAIQGW 85
          AKAIQ +
Sbjct: 80 AKAIQAF 86

[Close]

BLAST of Carg21701 vs. TAIR 10
Match: AT5G34940.2 (glucuronidase 3 )

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12
Identity = 25/62 (40.32%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 23 EHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLSHPLFAKAIQ 82
          E+  + +     V   D +FICAT+DWWP +KCDY  CSW ++S++NL+L++ +   AI+
Sbjct: 29 ENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLNNVILQNAIK 88

Query: 83 GW 85
           +
Sbjct: 89 AF 90

[Close]

BLAST of Carg21701 vs. TAIR 10
Match: AT5G34940.3 (glucuronidase 3 )

HSP 1 Score: 65.5 bits (158), Expect = 3.5e-11
Identity = 23/51 (45.10%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 23 EHARILINANEKVAETDYNFICATIDWWPHDKCDYNHCSWGYSSVINLNLS 74
          E+  + +     V   D +FICAT+DWWP +KCDY  CSW ++S++NL+L+
Sbjct: 29 ENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLT 79

The following BLAST results are available for this feature:

BLAST of Carg21701 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037132.1	2.9e-68	100.00	Heparanase-like protein 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022949131.1	5.5e-43	76.03	heparanase-like protein 1 [Cucurbita moschata] >XP_022949132.1 heparanase-like p...	[more]
KAG6607476.1	5.5e-43	76.03	Heparanase-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023523333.1	2.7e-42	74.38	heparanase-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023523334.1 heparanas...	[more]
XP_022998125.1	1.0e-41	73.55	heparanase-like protein 1 [Cucurbita maxima] >XP_022998126.1 heparanase-like pro...	[more]

BLAST of Carg21701 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FF10	8.9e-20	57.58	Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1	[more]
Q8L608	9.9e-19	53.73	Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1	[more]
Q9FZP1	2.0e-11	40.32	Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2	[more]
Q9LRC8	3.2e-09	37.18	Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis OX=65409 GN=SGUS PE=1 S...	[more]

BLAST of Carg21701 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GB71	2.7e-43	76.03	heparanase-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111452576 PE=3 SV=...	[more]
A0A6J1K9E1	5.0e-42	73.55	heparanase-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492865 PE=3 SV=1	[more]
A0A1S3BH81	2.4e-36	82.56	heparanase-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103489677 PE=3 SV=1	[more]
A0A5D3BL66	2.4e-36	82.56	Heparanase-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0LVK8	5.4e-36	64.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038980 PE=3 SV=1	[more]

BLAST of Carg21701 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07830.1	6.3e-21	57.58	glucuronidase 2	[more]
AT5G61250.2	7.0e-20	53.73	glucuronidase 1	[more]
AT5G61250.1	7.0e-20	53.73	glucuronidase 1	[more]
AT5G34940.2	1.4e-12	40.32	glucuronidase 3	[more]
AT5G34940.3	3.5e-11	45.10	glucuronidase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005199	Glycoside hydrolase, family 79	PFAM	PF03662	Glyco_hydro_79n	coord: 25..86 e-value: 1.5E-24 score: 86.5
None	No IPR available	PANTHER	PTHR14363:SF31	GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN	coord: 1..83
None	No IPR available	PANTHER	PTHR14363	HEPARANASE-RELATED	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21701-RA	Carg21701-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0004566	beta-glucuronidase activity
molecular_function	GO:0016798	hydrolase activity, acting on glycosyl bonds