
Carg21694 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAGCAAATGGAGAAGACGAACAAAGACGTTCCTCTTAGAGAACTTAGCGAGAGGGTAGCGGAAATTCGCTCGAGTTAGAGGTTGGGATAAGTATCACAGTCCGAGAAACCTCCTCCTGGCATTAGTAAGTCATTTCAAACCTACTCTTTCTGGTATCGTAATTGGTTATTGAGTTGTTGGTGTGTTTGATTATGGTAAAAAAAAAGGTGGGAGAAGTGGGGGAGGTGTCGGAGATATTCCAATGGAAGGGAGAGGTGGCGAGGGGGCTTCCCAACTGGTCCGCCGCCGACAAGGAGCAGTTGGGGGAGGAGCTCTCGAACGTGCTACTCTACTTGGTTCGTCTTGCGAATGTGTGTGGGGTTGATCTTGGCCGAGCTGCCCTTTCCAAGATCCTTAAGAATGCCACTAAGTACCCTCTCACTCCTCACCAACAACAATGACTATCTTGAATATGATTCAACTGATTAGACATATATGTTCGACGAAACTTTTAAACTAGCTCATGGAAGAAAAAATAACGATGACTTAGATTTTTGTTTACGTAGCATTATGGTTATTTGGGAGTGTTCTACGAAATAATATCAATTTTTACTCTAAATTTTAGTTGCAATTTCAATATAAATTTTACGAGATAATGTATTTTAATCCTGTTG ATGGAAAAGCAAATGGAGAAGACGAACAAAGACGTTCCTCTTAGAGAACTTAGCGAGAGGCGGAAATTCGCTCGAGTTAGAGGTTGGGATAAGTATCACAGTCCGAGAAACCTCCTCCTGGCATTAGTGGGAGAAGTGGGGGAGGTGTCGGAGATATTCCAATGGAAGGGAGAGGTGGCGAGGGGGCTTCCCAACTGGTCCGCCGCCGACAAGGAGCAGTTGGGGGAGGAGCTCTCGAACGTGCTACTCTACTTGGTTCGTCTTGCGAATGTGTGTGGGGTTGATCTTGGCCGAGCTGCCCTTTCCAAGATCCTTAAGAATGCCACTAAGTACCCTCTCACTCCTCACCAACAACAATGACTATCTTGAATATGATTCAACTGATTAGACATATATGTTCGACGAAACTTTTAAACTAGCTCATGGAAGAAAAAATAACGATGACTTAGATTTTTGTTTACGTAGCATTATGGTTATTTGGGAGTGTTCTACGAAATAATATCAATTTTTACTCTAAATTTTAGTTGCAATTTCAATATAAATTTTACGAGATAATGTATTTTAATCCTGTTG ATGGAAAAGCAAATGGAGAAGACGAACAAAGACGTTCCTCTTAGAGAACTTAGCGAGAGGCGGAAATTCGCTCGAGTTAGAGGTTGGGATAAGTATCACAGTCCGAGAAACCTCCTCCTGGCATTAGTGGGAGAAGTGGGGGAGGTGTCGGAGATATTCCAATGGAAGGGAGAGGTGGCGAGGGGGCTTCCCAACTGGTCCGCCGCCGACAAGGAGCAGTTGGGGGAGGAGCTCTCGAACGTGCTACTCTACTTGGTTCGTCTTGCGAATGTGTGTGGGGTTGATCTTGGCCGAGCTGCCCTTTCCAAGATCCTTAAGAATGCCACTAAGTACCCTCTCACTCCTCACCAACAACAATGA MEKQMEKTNKDVPLRELSERRKFARVRGWDKYHSPRNLLLALVGEVGEVSEIFQWKGEVARGLPNWSAADKEQLGEELSNVLLYLVRLANVCGVDLGRAALSKILKNATKYPLTPHQQQ Homology
BLAST of Carg21694 vs. NCBI nr
Match: KAG6607469.1 (dCTP pyrophosphatase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54 Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Carg21694 vs. NCBI nr
Match: XP_022948897.1 (dCTP pyrophosphatase 1-like [Cucurbita moschata]) HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54 Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0
BLAST of Carg21694 vs. NCBI nr
Match: XP_022998186.1 (dCTP pyrophosphatase 1-like [Cucurbita maxima]) HSP 1 Score: 220.3 bits (560), Expect = 8.8e-54 Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Carg21694 vs. NCBI nr
Match: XP_022137081.1 (dCTP pyrophosphatase 1-like [Momordica charantia]) HSP 1 Score: 181.4 bits (459), Expect = 4.5e-42 Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of Carg21694 vs. NCBI nr
Match: XP_038895217.1 (dCTP pyrophosphatase 1-like [Benincasa hispida]) HSP 1 Score: 177.9 bits (450), Expect = 5.0e-41 Identity = 91/121 (75.21%), Postives = 106/121 (87.60%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy Swiss-Prot
Match: Q91VC0 (dCTP pyrophosphatase 1 OS=Rattus norvegicus OX=10116 GN=Dctpp1 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.1e-22 Identity = 49/92 (53.26%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy Swiss-Prot
Match: Q9QY93 (dCTP pyrophosphatase 1 OS=Mus musculus OX=10090 GN=Dctpp1 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.6e-21 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy Swiss-Prot
Match: Q9H773 (dCTP pyrophosphatase 1 OS=Homo sapiens OX=9606 GN=DCTPP1 PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.7e-21 Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy Swiss-Prot
Match: Q32KY6 (dCTP pyrophosphatase 1 OS=Bos taurus OX=9913 GN=DCTPP1 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.5e-21 Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy TrEMBL
Match: A0A6J1GAI3 (dCTP pyrophosphatase 1 OS=Cucurbita moschata OX=3662 GN=LOC111452418 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54 Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy TrEMBL
Match: A0A6J1K9K2 (dCTP pyrophosphatase 1 OS=Cucurbita maxima OX=3661 GN=LOC111492910 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.3e-54 Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy TrEMBL
Match: A0A6J1C5G1 (dCTP pyrophosphatase 1 OS=Momordica charantia OX=3673 GN=LOC111008645 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.2e-42 Identity = 93/119 (78.15%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy TrEMBL
Match: A0A2R6QH57 (dCTP pyrophosphatase 1 OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18308 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.1e-41 Identity = 86/111 (77.48%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of Carg21694 vs. ExPASy TrEMBL
Match: A0A7J0FXY4 (dCTP pyrophosphatase 1 OS=Actinidia rufa OX=165716 GN=Acr_16g0001690 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 5.4e-41 Identity = 86/111 (77.48%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of Carg21694 vs. TAIR 10
Match: AT3G25400.1 (CONTAINS InterPro DOMAIN/s: NTP Pyrophosphohydrolase MazG-related, RS21-C6 (InterPro:IPR011394), EAR (InterPro:IPR009039), NTP pyrophosphohydrolase MazG, putative catalytic core (InterPro:IPR004518); Has 1123 Blast hits to 1121 proteins in 452 species: Archae - 22; Bacteria - 753; Metazoa - 81; Fungi - 3; Plants - 83; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). ) HSP 1 Score: 146.7 bits (369), Expect = 1.2e-35 Identity = 71/103 (68.93%), Postives = 85/103 (82.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|