Carg21688 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21688
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr01: 4506398 .. 4508933 (-)
RNA-Seq Expression	Carg21688
Synteny	Carg21688

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAGAAATTCTGAAAATTAAAATATTTAAAAGAAAAAGATGGAAGCTAAGAATAAGGAAGTTCAAATTTAAAAGAGAATGAGATGGAGTGTTCGTCATGATGGACCTTCTTCTTTTGTTTGGGCCTTCTCTCATCTCCTCAAATGGACATCGACATTTAGGGCACCAAAAAGCCTAATTTTTCTAATGGGAATTTCGAATTCCTAATTTTGTTCTATCGGATAGAATCGATCAATAATCTTCAATGGCAATTACAAGTTCAAACATCCAAGGAAACACGACTCGGTTCCTTCCTGTTGCATGAACGCATCCCAAGGCGTTTTCTTTGGATCTCTCAAGCTCAAATTACTCTCCATTTTTTGTTTGTTGCAATTCTTTATGTTGAAAAGGGAATTGGGTCGGCAGGTAAATGGCAGGTCATGAAGCCAGATCGGTTTTCGACTGGGAAAACTTCCATTCGTTGAATTCCTATCAGTCGTCTTCTTCATCTCAGCAGCCGAAAATCCAACTGAAAGAATGGTCAATGGTGGGGATTAGGGATTCTCTTCCCAAAGACGATTTCTCCGTCTTCCCACCTTCAAATCACGAGAATCTATGGCTACCATCGATTGAAGGAAACGAACGAGGAAGCCCAGTTTCATTTCAGTCCAATTCGCCATCCTCATCGTTTAGGTCGTCCCAATCATCTTCCTCCTTCTCATCTTTCTCACTTTCTGATGATGAGACTTCACATCCACAGTCACCGAGCCCATCTGATTGTCAAATTCGGAAGTCCATGGCGGCTTCTAGATGGATGGCTTTCGGCGTTCAGATTCTTCGCTCCCGGATTGCTGCAATGACTTCCTCAATTTGGCCCAATGCTGCGCGTAGAACGGCTGTTTGGTTGTTTTCCCCTGCTGGAAGGATTGGGTTATTGGTAACCCTCTGGTGGCTTTACAAGAGACTTCGTCAGCGCCGTTTGCGTCATAGTACAGAACAATTAAAGATGATGATCAAGGAGAAAGACAAGGTTTGTCAATTTCTGACCTCCAAGTGTTTGTGACAATGCTTGTAAGAGTTTTGACGCCCCCTGTATTCTGCAAAATGGGTATTAGAGAATATAATAGCTCTTTTCATAATACAACATTGCGTTACCAACTTACAAAATAACATGATATTGAATCTGGGTGTTTGAACTTGAAGTAAACCAAGTCATGACTGCATGTGGGGGGTTATCAGAAGTAGTTTAGTTCTTGTCTTTCTTGGCATGACCTTATTCCCTTCTACATTATGCTGCTCCTCTCCACTGTCTAATTAAAAAATCTTGGTTTCTTTAGTTGAAGAATGAGCTCAAGAGCTTTTGTCTTGCATTTGTCTGATAGATTCTGGGTTTTTTTTTTTTTTTTTTTTTTTTAATTTCTTTATCCAGAAAATCAGCCAACTACTGCAACAAGTTGCACAATTGAATAGATCAATGTTATTAGCCCAACAGAAAGTACTGCCATCAAATTAGAAAATGTGTCAAGGTAGCCATGTTTAGCGTCTATACCAGAGATGAGGCGGCAAGAAGTATTGCAGCTATTCTGAATATCTTGCTCGTTGAAGAAGTTTAGGCTTGAATTCTTGTTCAGATTCATAGAAGGAATCCAGTAGCATAGAATCGAACTGACACAGAAGCTCATGCCTTTGCCAGGGGAAGAGTATAAGGCAGGCACCATGTATGTCTCAAAACGACATGAATCTGTTTGTGGCTGCACAAAAACAGATGATCAGCTCAGAGATGCAATGTATACACAGATGATTTGTATTGATTTTTTCAGTATTTGTTCCAAGAAATATATATGTTCGATTAGGATTTTCTTGTAATGTCTTTGCCAACATCGTTTATTGACTGGGAAGCTTATGCTTATGCACAGTGTATTGGGGGTTGTAAATCGATATGATTTGCTTGCAATGTTAAACCATAAAACTATGCACTTCCTGCAGAGCATGCTTTCCAATAGAAACTGATAAGCACAGAATCATATTCCTACTTCCTTTATACATTTAATTTTATATCAACACACTTCCATCAGCTTATCTGATAATACATTGAAGACAGTTCATGAGTTCTGATAAAATTGAGATTGATCTTCTGGCTAAGAACTTTCGCAAGTTACATAAGTTGGGATCGGGAGAATAGGGTAAGCTCTTGGCCGTTTCGACTGACATCCCAATTCTTCTCGGCAGTAGATTTTTGATGATCTGATTCGACCAACTTAAGTTTCACCAGGGAGATGGTATTGAAGTACATGTATTTTAGCCCTCAAGACCCCAGCTTGGGAAATCCATGAGCAGCAAGACCGGATAAAGATTACTCAAGTAGTTTCTAGCCACCAGTAACCGCAAGGCTACAAGGACCTGGTGCAAGCAAATGGTGTCATATAACAGCAGAAATGGGTATCCTGCCGACATTGCCGTGATTGCATACAGTAAATATGCACACTTGCTTGCTTCACTGGATAAACAAGCATTCTTCAATAAATATTCCATCCGGATCCATACAGGAACTGAGTAA

mRNA sequence

AGTAGAAATTCTGAAAATTAAAATATTTAAAAGAAAAAGATGGAAGCTAAGAATAAGGAAGTTCAAATTTAAAAGAGAATGAGATGGAGTGTTCGTCATGATGGACCTTCTTCTTTTGTTTGGGCCTTCTCTCATCTCCTCAAATGGACATCGACATTTAGGGCACCAAAAAGCCTAATTTTTCTAATGGGAATTTCGAATTCCTAATTTTGTTCTATCGGATAGAATCGATCAATAATCTTCAATGGCAATTACAAGTTCAAACATCCAAGGAAACACGACTCGGTTCCTTCCTGTTGCATGAACGCATCCCAAGGCGTTTTCTTTGGATCTCTCAAGCTCAAATTACTCTCCATTTTTTGTTTGTTGCAATTCTTTATGTTGAAAAGGGAATTGGGTCGGCAGGTAAATGGCAGGTCATGAAGCCAGATCGGTTTTCGACTGGGAAAACTTCCATTCGTTGAATTCCTATCAGTCGTCTTCTTCATCTCAGCAGCCGAAAATCCAACTGAAAGAATGGTCAATGGTGGGGATTAGGGATTCTCTTCCCAAAGACGATTTCTCCGTCTTCCCACCTTCAAATCACGAGAATCTATGGCTACCATCGATTGAAGGAAACGAACGAGGAAGCCCAGTTTCATTTCAGTCCAATTCGCCATCCTCATCGTTTAGGTCGTCCCAATCATCTTCCTCCTTCTCATCTTTCTCACTTTCTGATGATGAGACTTCACATCCACAGTCACCGAGCCCATCTGATTGTCAAATTCGGAAGTCCATGGCGGCTTCTAGATGGATGGCTTTCGGCGTTCAGATTCTTCGCTCCCGGATTGCTGCAATGACTTCCTCAATTTGGCCCAATGCTGCGCGTAGAACGGCTGTTTGGTTGTTTTCCCCTGCTGGAAGGATTGGGTTATTGGTAACCCTCTGGTGGCTTTACAAGAGACTTCGTCAGCGCCGTTTGCGTCATAGTACAGAACAATTAAAGATGATGATCAAGGAGAAAGACAAGAAAATCAGCCAACTACTGCAACAAGTTGCACAATTGAATAGATCAATAATCGAACTGACACAGAAGCTCATGCCTTTGCCAGGGGAAGAGTATAAGGCAGGCACCATGTATGTCTCAAAACGACATGAATCTGTTTGTGGCTGCACAAAAACAGATGATCAGCTCAGAGATGCAATTAACCGCAAGGCTACAAGGACCTGGTGCAAGCAAATGGTGTCATATAACAGCAGAAATGGGTATCCTGCCGACATTGCCGTGATTGCATACAGTAAATATGCACACTTGCTTGCTTCACTGGATAAACAAGCATTCTTCAATAAATATTCCATCCGGATCCATACAGGAACTGAGTAA

Coding sequence (CDS)

ATGGCAGGTCATGAAGCCAGATCGGTTTTCGACTGGGAAAACTTCCATTCGTTGAATTCCTATCAGTCGTCTTCTTCATCTCAGCAGCCGAAAATCCAACTGAAAGAATGGTCAATGGTGGGGATTAGGGATTCTCTTCCCAAAGACGATTTCTCCGTCTTCCCACCTTCAAATCACGAGAATCTATGGCTACCATCGATTGAAGGAAACGAACGAGGAAGCCCAGTTTCATTTCAGTCCAATTCGCCATCCTCATCGTTTAGGTCGTCCCAATCATCTTCCTCCTTCTCATCTTTCTCACTTTCTGATGATGAGACTTCACATCCACAGTCACCGAGCCCATCTGATTGTCAAATTCGGAAGTCCATGGCGGCTTCTAGATGGATGGCTTTCGGCGTTCAGATTCTTCGCTCCCGGATTGCTGCAATGACTTCCTCAATTTGGCCCAATGCTGCGCGTAGAACGGCTGTTTGGTTGTTTTCCCCTGCTGGAAGGATTGGGTTATTGGTAACCCTCTGGTGGCTTTACAAGAGACTTCGTCAGCGCCGTTTGCGTCATAGTACAGAACAATTAAAGATGATGATCAAGGAGAAAGACAAGAAAATCAGCCAACTACTGCAACAAGTTGCACAATTGAATAGATCAATAATCGAACTGACACAGAAGCTCATGCCTTTGCCAGGGGAAGAGTATAAGGCAGGCACCATGTATGTCTCAAAACGACATGAATCTGTTTGTGGCTGCACAAAAACAGATGATCAGCTCAGAGATGCAATTAACCGCAAGGCTACAAGGACCTGGTGCAAGCAAATGGTGTCATATAACAGCAGAAATGGGTATCCTGCCGACATTGCCGTGATTGCATACAGTAAATATGCACACTTGCTTGCTTCACTGGATAAACAAGCATTCTTCAATAAATATTCCATCCGGATCCATACAGGAACTGAGTAA

Protein sequence

MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIRKSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMPLPGEEYKAGTMYVSKRHESVCGCTKTDDQLRDAINRKATRTWCKQMVSYNSRNGYPADIAVIAYSKYAHLLASLDKQAFFNKYSIRIHTGTE

Homology

[Close]

BLAST of Carg21688 vs. NCBI nr
Match: KAG7037120.1 (hypothetical protein SDJN02_00741 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 619.4 bits (1596), Expect = 1.7e-173
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR
Sbjct: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMPLPGEEYKAGTMYVSK 240
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMPLPGEEYKAGTMYVSK
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMPLPGEEYKAGTMYVSK 240

Query: 241 RHESVCGCTKTDDQLRDAINRKATRTWCKQMVSYNSRNGYPADIAVIAYSKYAHLLASLD 300
           RHESVCGCTKTDDQLRDAINRKATRTWCKQMVSYNSRNGYPADIAVIAYSKYAHLLASLD
Sbjct: 241 RHESVCGCTKTDDQLRDAINRKATRTWCKQMVSYNSRNGYPADIAVIAYSKYAHLLASLD 300

Query: 301 KQAFFNKYSIRIHTGTE 318
           KQAFFNKYSIRIHTGTE
Sbjct: 301 KQAFFNKYSIRIHTGTE 317

[Close]

BLAST of Carg21688 vs. NCBI nr
Match: KAG6607465.1 (hypothetical protein SDJN03_00807, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 418.3 bits (1074), Expect = 5.9e-113
Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR
Sbjct: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRS++   QK++P
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLP 225

[Close]

BLAST of Carg21688 vs. NCBI nr
Match: XP_022948859.1 (uncharacterized protein LOC111452392 [Cucurbita moschata])

HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-112
Identity = 217/225 (96.44%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAAS+WMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR
Sbjct: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRS++   QK++P
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLP 225

[Close]

BLAST of Carg21688 vs. NCBI nr
Match: XP_023524923.1 (uncharacterized protein LOC111788705 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.9 bits (1060), Expect = 2.5e-111
Identity = 215/225 (95.56%), Postives = 221/225 (98.22%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENF SLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFRSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAASRWMAFGVQILRSRIAAMTS+IWPNAARRTAVWLFSPAGRIGLL+TLWWLYKRLR
Sbjct: 121 KSMAASRWMAFGVQILRSRIAAMTSTIWPNAARRTAVWLFSPAGRIGLLLTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRS++   QK++P
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLP 225

[Close]

BLAST of Carg21688 vs. NCBI nr
Match: XP_022997987.1 (uncharacterized protein LOC111492777 [Cucurbita maxima])

HSP 1 Score: 406.8 bits (1044), Expect = 1.8e-109
Identity = 214/228 (93.86%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLN---SYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS 60
           +AGHEARSVFDWENFHSLN   SYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS
Sbjct: 32  LAGHEARSVFDWENFHSLNSYHSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS 91

Query: 61  NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDC 120
           NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSD 
Sbjct: 92  NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDS 151

Query: 121 QIRKSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYK 180
           QIRKSMAASRWMAFGVQILRSRIAAMTS+IWPNAARRTAVWLFSPAGRIGLL+TLWWLYK
Sbjct: 152 QIRKSMAASRWMAFGVQILRSRIAAMTSTIWPNAARRTAVWLFSPAGRIGLLLTLWWLYK 211

Query: 181 RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRS++   QK++P
Sbjct: 212 RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLSAQQKVLP 259

[Close]

BLAST of Carg21688 vs. ExPASy TrEMBL
Match: A0A6J1GB64 (uncharacterized protein LOC111452392 OS=Cucurbita moschata OX=3662 GN=LOC111452392 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 6.3e-113
Identity = 217/225 (96.44%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE
Sbjct: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR
Sbjct: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120

Query: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAAS+WMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR
Sbjct: 121 KSMAASKWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRS++   QK++P
Sbjct: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLLAQQKVLP 225

[Close]

BLAST of Carg21688 vs. ExPASy TrEMBL
Match: A0A6J1K6L4 (uncharacterized protein LOC111492777 OS=Cucurbita maxima OX=3661 GN=LOC111492777 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 8.5e-110
Identity = 214/228 (93.86%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLN---SYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS 60
           +AGHEARSVFDWENFHSLN   SYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS
Sbjct: 32  LAGHEARSVFDWENFHSLNSYHSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPS 91

Query: 61  NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDC 120
           NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSD 
Sbjct: 92  NHENLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDS 151

Query: 121 QIRKSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYK 180
           QIRKSMAASRWMAFGVQILRSRIAAMTS+IWPNAARRTAVWLFSPAGRIGLL+TLWWLYK
Sbjct: 152 QIRKSMAASRWMAFGVQILRSRIAAMTSTIWPNAARRTAVWLFSPAGRIGLLLTLWWLYK 211

Query: 181 RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRS++   QK++P
Sbjct: 212 RLRQRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSMLSAQQKVLP 259

[Close]

BLAST of Carg21688 vs. ExPASy TrEMBL
Match: A0A6J1C560 (uncharacterized protein LOC111008581 OS=Momordica charantia OX=3673 GN=LOC111008581 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 4.4e-82
Identity = 171/225 (76.00%), Postives = 190/225 (84.44%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAG E RSVFDWENF S NS  S S+S+  KI+LKEWSMV I DS P +DFSVFPPSNHE
Sbjct: 1   MAGDETRSVFDWENFPSSNSSVSPSASRLRKIELKEWSMVVITDSRPNNDFSVFPPSNHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NL  PS E +ERGSPVSFQS+SPS+SFRSSQSSSSFSSFS SDDETSH  SP PSDCQIR
Sbjct: 61  NLHCPSNEEDERGSPVSFQSSSPSTSFRSSQSSSSFSSFSFSDDETSHSHSPKPSDCQIR 120

Query: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           KSMAASRWM +GVQILR+RI AM S+IW N ARRTA W+FSPAGRI L+VTLWWLYKR R
Sbjct: 121 KSMAASRWMVYGVQILRARITAMASTIWSNTARRTAFWVFSPAGRIALVVTLWWLYKRAR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           QRRLR S+EQL+M+IKEKDKKISQLLQQVAQLN  ++   QK++P
Sbjct: 181 QRRLRQSSEQLRMIIKEKDKKISQLLQQVAQLN-GLLLAQQKVLP 224

[Close]

BLAST of Carg21688 vs. ExPASy TrEMBL
Match: A0A1S3BA65 (uncharacterized protein LOC103487835 OS=Cucumis melo OX=3656 GN=LOC103487835 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69
Identity = 159/225 (70.67%), Postives = 172/225 (76.44%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MA  E+RSVFDW N    NSYQSS             SMV IRDS PKDDFSVFPPS HE
Sbjct: 50  MADDESRSVFDWGNSPPFNSYQSS-------------SMVVIRDSPPKDDFSVFPPSKHE 109

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NL  PSI  +ERGSPVSFQSNSPSSSFRSSQSSSSFSSFS SDDE SHP SP PS  QI+
Sbjct: 110 NLQPPSIGEDERGSPVSFQSNSPSSSFRSSQSSSSFSSFSFSDDEASHPHSPKPSGSQIQ 169

Query: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           K M  SRW+ +GVQILR RI AM S+IW NA    A WLFSPAGRIGLLVTL WLYKR R
Sbjct: 170 KPMVTSRWLLWGVQILRLRITAMASTIWSNA----AFWLFSPAGRIGLLVTLLWLYKRAR 229

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           +RRLR ST QLKMM+KEKD+KISQL+QQVAQLNRS+I   QK++P
Sbjct: 230 KRRLRRSTNQLKMMMKEKDEKISQLMQQVAQLNRSLILAQQKVLP 257

[Close]

BLAST of Carg21688 vs. ExPASy TrEMBL
Match: A0A0A0LVK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038390 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 8.1e-68
Identity = 155/225 (68.89%), Postives = 171/225 (76.00%), Query Frame = 0


Query: 1   MAGHEARSVFDWENFHSLNSYQSSSSSQQPKIQLKEWSMVGIRDSLPKDDFSVFPPSNHE 60
           MAG E+RSVFDW +F    S+ SS             SMV IRDS PKDDFSVFPPS HE
Sbjct: 1   MAGDESRSVFDWGDFPPFTSHHSS-------------SMVVIRDSPPKDDFSVFPPSKHE 60

Query: 61  NLWLPSIEGNERGSPVSFQSNSPSSSFRSSQSSSSFSSFSLSDDETSHPQSPSPSDCQIR 120
           NL  PS++ +ER S VSFQSNSPSSSFRSS SSSSFSSFS SDDE SHP SP PSD QI+
Sbjct: 61  NLQPPSLQEDERESSVSFQSNSPSSSFRSSHSSSSFSSFSFSDDEASHPHSPKPSDSQIQ 120

Query: 121 KSMAASRWMAFGVQILRSRIAAMTSSIWPNAARRTAVWLFSPAGRIGLLVTLWWLYKRLR 180
           K M ASRW+  GVQILR RI AM S+IW NA    A WLFSPAGRIGLLVTL WLYKR R
Sbjct: 121 KPMVASRWLLLGVQILRPRITAMASTIWSNA----AFWLFSPAGRIGLLVTLLWLYKRAR 180

Query: 181 QRRLRHSTEQLKMMIKEKDKKISQLLQQVAQLNRSIIELTQKLMP 226
           +RRLR S+EQLKMMIKEKD+KIS L+QQVAQLNRS+I   QK++P
Sbjct: 181 KRRLRRSSEQLKMMIKEKDEKISHLMQQVAQLNRSLILAQQKVLP 208

[Close]

BLAST of Carg21688 vs. TAIR 10
Match: AT5G61360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits to 20 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 2.4e-08
Identity = 60/194 (30.93%), Postives = 94/194 (48.45%), Query Frame = 0


Query: 36  EWSMVGIRDS--LPKDDFSVFPPSNHENLWLPSIEGNERGSPVSFQSNSPS-SSFRSSQS 95
           ++ MV +R+S    KDD ++FPP NHENL++  +E     S  S  S+  S SSF  S S
Sbjct: 20  QFPMVFVRESTCFAKDDLAIFPPINHENLYVNGLESPSVSSSSSSSSSRLSDSSFSPSDS 79

Query: 96  SSSFSSFSLSDDETSHPQSPSPSDCQIRKSMAASRWMAFGVQILRSRIAAMTSSIWPNAA 155
              F     S  + S     SP    I   +    W     +IL +R+ +   ++     
Sbjct: 80  DEQFQFSRKSHSQPSEDVGKSPWKSVIEIDIIQGWW-----KILLARVMSNFQNL-VTCF 139

Query: 156 RRTAVWLFSPAGR--IGLLVTLWWLYKRLRQRRLRHSTE----QLKMMIKEKDKKISQLL 215
            R ++  FS   R    ++V   W +KR R RR     E     L+  IKE+D++I+QLL
Sbjct: 140 SRNSLCSFSKTLRSFYSVMVIFLWWWKRNRTRRRLEKGEIIAAHLRDTIKERDERIAQLL 199

Query: 216 QQVAQLNRSIIELT 221
            Q+ Q+N  ++++T
Sbjct: 200 HQITQMNELLVKIT 207

The following BLAST results are available for this feature:

BLAST of Carg21688 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037120.1	1.7e-173	100.00	hypothetical protein SDJN02_00741 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6607465.1	5.9e-113	96.89	hypothetical protein SDJN03_00807, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022948859.1	1.3e-112	96.44	uncharacterized protein LOC111452392 [Cucurbita moschata]	[more]
XP_023524923.1	2.5e-111	95.56	uncharacterized protein LOC111788705 [Cucurbita pepo subsp. pepo]	[more]
XP_022997987.1	1.8e-109	93.86	uncharacterized protein LOC111492777 [Cucurbita maxima]	[more]

BLAST of Carg21688 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21688 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GB64	6.3e-113	96.44	uncharacterized protein LOC111452392 OS=Cucurbita moschata OX=3662 GN=LOC1114523...	[more]
A0A6J1K6L4	8.5e-110	93.86	uncharacterized protein LOC111492777 OS=Cucurbita maxima OX=3661 GN=LOC111492777...	[more]
A0A6J1C560	4.4e-82	76.00	uncharacterized protein LOC111008581 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]
A0A1S3BA65	1.5e-69	70.67	uncharacterized protein LOC103487835 OS=Cucumis melo OX=3656 GN=LOC103487835 PE=...	[more]
A0A0A0LVK1	8.1e-68	68.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G038390 PE=4 SV=1	[more]

BLAST of Carg21688 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61360.1	2.4e-08	30.93	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..119
None	No IPR available	PANTHER	PTHR37206	TRANSMEMBRANE PROTEIN	coord: 1..222
None	No IPR available	PANTHER	PTHR37206:SF1	TRANSMEMBRANE PROTEIN	coord: 1..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21688-RA	Carg21688-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane