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Carg21579 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTCCTTTATCGCAACCACTTAAACAAAGCTTTTCACAGTCCCATCATCCATGGCTCATAAAATCCTCCCCTGTTTCGCCGGCAGCGTTTAACCGGACCATGGCGGAGCGGCCCAACAAGACGGCGGCGGCGGCGGGAATTGGAGTTCGGAAGCTTAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCATCGAATCCTTATCTCTGCCTCTCGTCTCTGCTTTTTCTCTGTATCTCCGCCGTTTTTCGAGCTCTCCGGCTGAAATTAACGCTTAATGGTCCGTGATTCTTCAGGTTCAGGAAATCGTGTTCGCGGCGGACATTGGCTGCGCTGAATGCCAGAAGAAATTAGCGAATATTCTTGCCAAAATGAACGGTGAGTTTATGGGAATTTTGGGGCTCTGTTTCCTCGGAATCTTATTCCAATCTTCTAATTTCAATGGCCGATATTAGTCATTTCTAACATAGTATTAGAGTCATGCTCTTAATTTGGAAAGGTGTAGTCAATTTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCAGTTTGAGCATGAGTTTTCGTGGCTTTGCTTTGGGTTTACCCAAAATGCCTCCTGTCAATGGAGGGAGTATTTTTTGTTTATAAACTCATGATTATTTCCTAAATTAGCCGATGATGCGGGACTTCCATCATCCAACAGTCAAAAGTGACTAAAGTGTCGAACAAAGGGTGTACTTTGTTCGAAGACTCAAGATAAGGAGTCGAGCCCGAATAAAGGGAGATTGTTCAAGAGCTCCATCGACCTCAGGGAGGCTCTATGATGTAGTTTATTCGATGGGAGAATTGTTAGAGGGAGTCCACACCGGTAGTTTCTTCATTTGTGTGAGATTTTTTGGGGAAGTTTGAAGCAAATCCATGAGAGCTTATGGTCAAAATGGACAATATCATATCATTTGGTGTTCCTTTTTAGAACATGGGTTGTTTATAATTGGAAGTTCTTAATGATTTTTGTCGTGGATTTAGATACAGAGTCTGTGGTGGTGAATTTGCTGGACAAAAAAGTGATACTGACTCGAAAATTGCAGATTCCAACAAGTAGAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCCGATAATGGTGAAGATATTGTGATATATAACAGAATATTTTCGGTCACATTCGTAGATAAATAAAGGATCATACTCTTTGTTGTTTAGTCTCGGCTATTATTGTTTTTATGAGAATATTAAATATTGGGTTCTGAATGCAACAAAATCATCGTACATTAAAAGATGATTTTGATCGGAGTTGAAAACATTTTAAAGGAGTGAGCCTTGCTGGAAAACATGGCTCTGGCTCAATGTAATTACGGGTTTAATCGATGGAGGCTCTGTTTGTGTCGTTTTCGTTATAATTCTTTTGACATTTTTGTTGTCTATTATTGGTGTATTGGTATGTGAGATTCCATATCGGTTTGAGAGGTAGTATGTACCTC CTTCTCCTTTATCGCAACCACTTAAACAAAGCTTTTCACAGTCCCATCATCCATGGCTCATAAAATCCTCCCCTGTTTCGCCGGCAGCGTTTAACCGGACCATGGCGGAGCGGCCCAACAAGACGGCGGCGGCGGCGGGAATTGGAGTTCGGAAGCTTAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCATCGAATCCTTATCTCTGCCTCTCGTTCAGGAAATCGTGTTCGCGGCGGACATTGGCTGCGCTGAATGCCAGAAGAAATTAGCGAATATTCTTGCCAAAATGAACGATACAGAGTCTGTGGTGGTGAATTTGCTGGACAAAAAAGTGATACTGACTCGAAAATTGCAGATTCCAACAAGTAGAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCCGATAATGGTGAAGATATTGTGATATATAACAGAATATTTTCGGTCACATTCGTAGATAAATAAAGGATCATACTCTTTGTTGTTTAGTCTCGGCTATTATTGTTTTTATGAGAATATTAAATATTGGGTTCTGAATGCAACAAAATCATCGTACATTAAAAGATGATTTTGATCGGAGTTGAAAACATTTTAAAGGAGTGAGCCTTGCTGGAAAACATGGCTCTGGCTCAATGTAATTACGGGTTTAATCGATGGAGGCTCTGTTTGTGTCGTTTTCGTTATAATTCTTTTGACATTTTTGTTGTCTATTATTGGTGTATTGGTATGTGAGATTCCATATCGGTTTGAGAGGTAGTATGTACCTC ATGGCGGAGCGGCCCAACAAGACGGCGGCGGCGGCGGGAATTGGAGTTCGGAAGCTTAAGATTTTCCCTCATGCTTCTAGCCTTGCCTCCATCGAATCCTTATCTCTGCCTCTCGTTCAGGAAATCGTGTTCGCGGCGGACATTGGCTGCGCTGAATGCCAGAAGAAATTAGCGAATATTCTTGCCAAAATGAACGATACAGAGTCTGTGGTGGTGAATTTGCTGGACAAAAAAGTGATACTGACTCGAAAATTGCAGATTCCAACAAGTAGAGTTTCAACGATCAAGAGATTGCTTGGTTCTTCTTTCCGATAA MAERPNKTAAAAGIGVRKLKIFPHASSLASIESLSLPLVQEIVFAADIGCAECQKKLANILAKMNDTESVVVNLLDKKVILTRKLQIPTSRVSTIKRLLGSSFR Homology
BLAST of Carg21579 vs. NCBI nr
Match: KAG7013033.1 (hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Carg21579 vs. NCBI nr
Match: KAG6573976.1 (hypothetical protein SDJN03_27863, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 191.4 bits (485), Expect = 3.8e-45 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Carg21579 vs. NCBI nr
Match: XP_023542320.1 (uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43 Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of Carg21579 vs. NCBI nr
Match: XP_022968296.1 (uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima]) HSP 1 Score: 181.8 bits (460), Expect = 3.0e-42 Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Carg21579 vs. NCBI nr
Match: XP_022945539.1 (uncharacterized protein LOC111449743 isoform X3 [Cucurbita moschata]) HSP 1 Score: 181.8 bits (460), Expect = 3.0e-42 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Carg21579 vs. ExPASy TrEMBL
Match: A0A6J1HUG9 (uncharacterized protein LOC111467567 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467567 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42 Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 0
BLAST of Carg21579 vs. ExPASy TrEMBL
Match: A0A6J1G188 (uncharacterized protein LOC111449743 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42 Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of Carg21579 vs. ExPASy TrEMBL
Match: A0A6J1G176 (uncharacterized protein LOC111449743 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.7e-38 Identity = 100/130 (76.92%), Postives = 101/130 (77.69%), Query Frame = 0
BLAST of Carg21579 vs. ExPASy TrEMBL
Match: A0A6J1G168 (uncharacterized protein LOC111449743 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449743 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 3.0e-35 Identity = 98/130 (75.38%), Postives = 99/130 (76.15%), Query Frame = 0
BLAST of Carg21579 vs. ExPASy TrEMBL
Match: A0A6J1DB71 (uncharacterized protein LOC111018707 OS=Momordica charantia OX=3673 GN=LOC111018707 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.4e-31 Identity = 83/110 (75.45%), Postives = 92/110 (83.64%), Query Frame = 0
BLAST of Carg21579 vs. TAIR 10
Match: AT1G68585.1 (unknown protein; Has 23 Blast hits to 23 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 9.2e-13 Identity = 40/85 (47.06%), Postives = 64/85 (75.29%), Query Frame = 0
BLAST of Carg21579 vs. TAIR 10
Match: AT2G35730.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04 Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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