Carg21513 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg21513
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionethylene-responsive transcription factor 12-like
LocationCarg_Chr13: 7219451 .. 7219954 (-)
RNA-Seq ExpressionCarg21513
SyntenyCarg21513
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACTCGCGAGGCTCACTACAGGGGCGTCAGAAAGAGGCCATGGGGTCGCTACGCCGCTGAGATTCGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCTTACGACGGTGCCGCCAGGTCCCTCCGCGGCTCCAAAGCCAAGACCAACTTCCCTCCCCCTCTCTCCCTCGACCTCAACGTCTCCTCCACTCCTACAACCTGCAACTGGCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCCCTTCCTCCTCCTCCTCCTCCTCCGCCGCTCGTCTTCTCCTCGGCGATTTCCTCCGCCACGGCGCTCGCAACGACTTGTGTAATGTCAATGTGGAGGCCTCTCCGGGACTGGTGGACTCGAGCGATCCAGCGCCCAACACTACGGCGTCGTTTATGGGGCACGTGCGTCGTGGCCTCCCCTTTGATCTGAACGAGCCTCCTCCGGTGTGGCTATGA

mRNA sequence

ATGGCTTCCACTCGCGAGGCTCACTACAGGGGCGTCAGAAAGAGGCCATGGGGTCGCTACGCCGCTGAGATTCGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCTTACGACGGTGCCGCCAGGTCCCTCCGCGGCTCCAAAGCCAAGACCAACTTCCCTCCCCCTCTCTCCCTCGACCTCAACGTCTCCTCCACTCCTACAACCTGCAACTGGCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCCCTTCCTCCTCCTCCTCCTCCTCCGCCGCTCGTCTTCTCCTCGGCGATTTCCTCCGCCACGGCGCTCGCAACGACTTGTGTAATGTCAATGTGGAGGCCTCTCCGGGACTGGTGGACTCGAGCGATCCAGCGCCCAACACTACGGCGTCGTTTATGGGGCACGTGCGTCGTGGCCTCCCCTTTGATCTGAACGAGCCTCCTCCGGTGTGGCTATGA

Coding sequence (CDS)

ATGGCTTCCACTCGCGAGGCTCACTACAGGGGCGTCAGAAAGAGGCCATGGGGTCGCTACGCCGCTGAGATTCGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCTTACGACGGTGCCGCCAGGTCCCTCCGCGGCTCCAAAGCCAAGACCAACTTCCCTCCCCCTCTCTCCCTCGACCTCAACGTCTCCTCCACTCCTACAACCTGCAACTGGCCTTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCCCTTCCTCCTCCTCCTCCTCCTCCGCCGCTCGTCTTCTCCTCGGCGATTTCCTCCGCCACGGCGCTCGCAACGACTTGTGTAATGTCAATGTGGAGGCCTCTCCGGGACTGGTGGACTCGAGCGATCCAGCGCCCAACACTACGGCGTCGTTTATGGGGCACGTGCGTCGTGGCCTCCCCTTTGATCTGAACGAGCCTCCTCCGGTGTGGCTATGA

Protein sequence

MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARNDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Homology
[Close]
BLAST of Carg21513 vs. NCBI nr
Match: KAG7019604.1 (Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333.6 bits (854), Expect = 1.0e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN 120

Query: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168
           DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 167

[Close]
BLAST of Carg21513 vs. NCBI nr
Match: KAG6583981.1 (Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.8 bits (839), Expect = 5.5e-86
Identity = 166/168 (98.81%), Postives = 167/168 (99.40%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAA-AAPSSSSSSSAARLLLGDFLRHGAR 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSS+AAAA AAPSSSSSSSAARLLLGDFLRHGAR
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSAAAAATAAPSSSSSSSAARLLLGDFLRHGAR 120

Query: 121 NDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168
           NDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NDLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168

[Close]
BLAST of Carg21513 vs. NCBI nr
Match: XP_022927218.1 (ethylene-responsive transcription factor 12-like [Cucurbita moschata])

HSP 1 Score: 327.8 bits (839), Expect = 5.5e-86
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS AAAAAPSSSSSSSAARLLLGDFLRHGARN
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS-AAAAAPSSSSSSSAARLLLGDFLRHGARN 120

Query: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168
           DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 166

[Close]
BLAST of Carg21513 vs. NCBI nr
Match: XP_023520106.1 (ethylene-responsive transcription factor 12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.3 bits (830), Expect = 6.1e-85
Identity = 164/167 (98.20%), Postives = 164/167 (98.20%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS  AAAAPSSSSSSSAARLLLGDFLRHGARN
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS--AAAAPSSSSSSSAARLLLGDFLRHGARN 120

Query: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168
           DLCNVNVEASPGLVDS DPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 DLCNVNVEASPGLVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 165

[Close]
BLAST of Carg21513 vs. NCBI nr
Match: XP_023001756.1 (ethylene-responsive transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 158/167 (94.61%), Postives = 159/167 (95.21%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSS       AAPSSSSSSS+ARLLLGDFLRHGARN
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSS-------AAPSSSSSSSSARLLLGDFLRHGARN 120

Query: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168
           DLCNVNVEASPGLVDS DPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 DLCNVNVEASPGLVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 160

[Close]
BLAST of Carg21513 vs. ExPASy Swiss-Prot
Match: Q94ID6 (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=ERF12 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-38
Identity = 106/199 (53.27%), Postives = 115/199 (57.79%), Query Frame = 0 

Query: 1   MAST---REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAA-------------AAAPSSSSSSS 120
            KAKTNFP PLSLDLN        + PS+ S++ AA             AA P    SS 
Sbjct: 61  IKAKTNFPSPLSLDLN--------HLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSD 120

Query: 121 AARLLLGDFLRHGARNDLCNVNVEASPGLVDSSDPAPNTTASFMGH-------------- 168
                   FLR G  ND  +        L  +S  +PNT  S  G+              
Sbjct: 121 HHHQHHRIFLRTGVLNDKTSDYSSTEAPLYFTS--SPNTATSSPGYQVVGFPMMNSSPSP 180

[Close]
BLAST of Carg21513 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-24
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 5  REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65 PPP 68
          P P
Sbjct: 89 PLP 91

[Close]
BLAST of Carg21513 vs. ExPASy Swiss-Prot
Match: O80339 (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.1e-24
Identity = 54/77 (70.13%), Postives = 60/77 (77.92%), Query Frame = 0 

Query: 3  STREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          S +E  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63 NF------PPPLSLDLN 74
          NF      PPP +L  N
Sbjct: 82 NFPIDSSSPPPPNLRFN 98

[Close]
BLAST of Carg21513 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.9e-23
Identity = 78/192 (40.62%), Postives = 99/192 (51.56%), Query Frame = 0 

Query: 4   TREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTN 63
           ++E  +RGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AAR+LRG KAKTN
Sbjct: 23  SKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTN 82

Query: 64  FPPPLSLDLNVSSTPTTCNWPSSSS-----SSAAAAAAPSSSSSSSAARLLLGDFLRHGA 123
           FP P +     +      N P   S      +   +  P+SSS SS      G       
Sbjct: 83  FPLPYAHHHQFNQGHNPNNDPFVDSRFYPQDNPIISQRPTSSSMSSTVESFSGPRPPPAP 142

Query: 124 RN-----------------DLCNVNVEASPGLVDSSDPAPN--------TTASFMGHVRR 166
           R                  D C+ + ++S  +VD  D             ++SF    R+
Sbjct: 143 RQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDHGDCEKENDNDNDNIASSSF----RK 202

[Close]
BLAST of Carg21513 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.9e-21
Identity = 62/104 (59.62%), Postives = 71/104 (68.27%), Query Frame = 0 

Query: 3   STREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
           + +E  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 63  NFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAA 107
           NF  P  L+L+    PT      S SS+   A+ P+    S+ A
Sbjct: 79  NF--PTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATA 120

[Close]
BLAST of Carg21513 vs. ExPASy TrEMBL
Match: A0A6J1EKE1 (ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111434133 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86
Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS AAAAAPSSSSSSSAARLLLGDFLRHGARN
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSS-AAAAAPSSSSSSSAARLLLGDFLRHGARN 120

Query: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168
           DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 166

[Close]
BLAST of Carg21513 vs. ExPASy TrEMBL
Match: A0A6J1KJH9 (ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC111495799 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.0e-83
Identity = 158/167 (94.61%), Postives = 159/167 (95.21%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHGARN 120
           KTNFPPPLSLDLNVSSTPTTCNWPSSS       AAPSSSSSSS+ARLLLGDFLRHGARN
Sbjct: 61  KTNFPPPLSLDLNVSSTPTTCNWPSSS-------AAPSSSSSSSSARLLLGDFLRHGARN 120

Query: 121 DLCNVNVEASPGLVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168
           DLCNVNVEASPGLVDS DPAPNTTASFMGHVRRGLPFDLNEPPPVWL
Sbjct: 121 DLCNVNVEASPGLVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 160

[Close]
BLAST of Carg21513 vs. ExPASy TrEMBL
Match: A0A5D3DSV2 (Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00990 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.5e-62
Identity = 134/172 (77.91%), Postives = 144/172 (83.72%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHG 120
           KTNFPPP   LSLDLNVS       WP+ +S    A    SSSSSSS+AR LLGDFLRHG
Sbjct: 61  KTNFPPPLPGLSLDLNVSGP-----WPTPTS----APPCSSSSSSSSSARFLLGDFLRHG 120

Query: 121 ARNDLCNVNVE-ASPGLVDSSDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 168
            RND+CN+NV+ ASP LVD+S  A +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 VRNDMCNLNVDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]
BLAST of Carg21513 vs. ExPASy TrEMBL
Match: A0A1S3B631 (ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486573 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.5e-62
Identity = 134/172 (77.91%), Postives = 144/172 (83.72%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHG 120
           KTNFPPP   LSLDLNVS       WP+ +S    A    SSSSSSS+AR LLGDFLRHG
Sbjct: 61  KTNFPPPLPGLSLDLNVSGP-----WPTPTS----APPCSSSSSSSSSARFLLGDFLRHG 120

Query: 121 ARNDLCNVNVE-ASPGLVDSSDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 168
            RND+CN+NV+ ASP LVD+S  A +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 VRNDMCNLNVDAASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]
BLAST of Carg21513 vs. ExPASy TrEMBL
Match: A0A0A0LSE4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.6e-62
Identity = 131/171 (76.61%), Postives = 142/171 (83.04%), Query Frame = 0 

Query: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPP---LSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAARLLLGDFLRHG 120
           KTNFPPP   LSLDLNVS       WP  + +SA   ++ SSS S S+ R LLGDFLRHG
Sbjct: 61  KTNFPPPLPGLSLDLNVSGP-----WP--TPTSAPPCSSSSSSPSPSSTRFLLGDFLRHG 120

Query: 121 ARNDLCNVNVEASPGLVDSSDPAPNT-TASFMGHVRRGLPFDLNEPPPVWL 168
            RND+CN+NV+ASP LVDSS    +T +ASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 VRNDICNLNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]
BLAST of Carg21513 vs. TAIR 10
Match: AT1G28360.1 (ERF domain protein 12 )

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-39
Identity = 106/199 (53.27%), Postives = 115/199 (57.79%), Query Frame = 0 

Query: 1   MAST---REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLSLDLNVSSTPTTCNWPSSSSSSAAA-------------AAAPSSSSSSS 120
            KAKTNFP PLSLDLN        + PS+ S++ AA             AA P    SS 
Sbjct: 61  IKAKTNFPSPLSLDLN--------HLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSD 120

Query: 121 AARLLLGDFLRHGARNDLCNVNVEASPGLVDSSDPAPNTTASFMGH-------------- 168
                   FLR G  ND  +        L  +S  +PNT  S  G+              
Sbjct: 121 HHHQHHRIFLRTGVLNDKTSDYSSTEAPLYFTS--SPNTATSSPGYQVVGFPMMNSSPSP 180

[Close]
BLAST of Carg21513 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = 0 

Query: 5  REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65 PPP 68
          P P
Sbjct: 89 PLP 91

[Close]
BLAST of Carg21513 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 111.7 bits (278), Expect = 5.8e-25
Identity = 54/77 (70.13%), Postives = 60/77 (77.92%), Query Frame = 0 

Query: 3  STREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          S +E  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63 NF------PPPLSLDLN 74
          NF      PPP +L  N
Sbjct: 82 NFPIDSSSPPPPNLRFN 98

[Close]
BLAST of Carg21513 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 62/104 (59.62%), Postives = 71/104 (68.27%), Query Frame = 0 

Query: 3   STREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
           + +E  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 63  NFPPPLSLDLNVSSTPTTCNWPSSSSSSAAAAAAPSSSSSSSAA 107
           NF  P  L+L+    PT      S SS+   A+ P+    S+ A
Sbjct: 79  NF--PTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATA 120

[Close]
BLAST of Carg21513 vs. TAIR 10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-21
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 5   REAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
           R+ HYRGVR+RPWG++AAEIRDP K  RVWLGTF+T E AALAYD AA   +GSKAK NF
Sbjct: 88  RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNF 147

Query: 65  PPPLSLDLNVSSTPTTCNWPSSSS 89
           P    L  N S+T    N+ SS++
Sbjct: 148 PERAQLASNTSTTTGPPNYYSSNN 171

The following BLAST results are available for this feature:
BLAST of Carg21513 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7019604.11.0e-87100.00Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma sub... [more]
KAG6583981.15.5e-8698.81Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma sub... [more]
XP_022927218.15.5e-8699.40ethylene-responsive transcription factor 12-like [Cucurbita moschata][more]
XP_023520106.16.1e-8598.20ethylene-responsive transcription factor 12 [Cucurbita pepo subsp. pepo][more]
XP_023001756.11.7e-8294.61ethylene-responsive transcription factor 12 [Cucurbita maxima][more]
BLAST of Carg21513 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94ID62.0e-3853.27Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=E... [more]
Q9FE673.6e-2484.13Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
O803398.1e-2470.13Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
Q9SXS86.9e-2340.63Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ... [more]
O803402.9e-2159.62Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER... [more]
BLAST of Carg21513 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EKE12.7e-8699.40ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 G... [more]
A0A6J1KJH98.0e-8394.61ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A5D3DSV23.5e-6277.91Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B6313.5e-6277.91ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486... [more]
A0A0A0LSE44.6e-6276.61AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=... [more]
BLAST of Carg21513 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G28360.11.4e-3953.27ERF domain protein 12 [more]
AT5G44210.12.6e-2584.13erf domain protein 9 [more]
AT1G50640.15.8e-2570.13ethylene responsive element binding factor 3 [more]
AT3G15210.12.0e-2259.62ethylene responsive element binding factor 4 [more]
AT5G07310.13.0e-2160.71Integrase-type DNA-binding superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 31..47
score: 70.59
coord: 9..20
score: 66.67
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 8..71
e-value: 9.4E-37
score: 138.1
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 8..57
e-value: 1.7E-14
score: 53.7
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 8..65
score: 22.760784
IPR001471AP2/ERF domainCDDcd00018AP2coord: 7..65
e-value: 3.77037E-31
score: 105.046
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10AP2/ERF domaincoord: 7..66
e-value: 2.6E-27
score: 96.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..101
NoneNo IPR availablePANTHERPTHR31677:SF46AP2 DOMAIN CLASS TRANSCRIPTION FACTORcoord: 4..140
NoneNo IPR availablePANTHERPTHR31677AP2 DOMAIN CLASS TRANSCRIPTION FACTORcoord: 4..140
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 8..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21513-RACarg21513-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity