Carg21504 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg21504
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnon-classical arabinogalactan protein 31-like
LocationCarg_Chr13: 7265083 .. 7265880 (-)
RNA-Seq ExpressionCarg21504
SyntenyCarg21504
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTGTCGCTACCGGTGCTGTCATTGTCCTCCTGCTTGGCTGCGCCCTCAATGCATTCCAAGCGGCTGCAAGCCACGGCAGCCCTACTCTGGCACCAAGGCCAGATGACCGTCACTACCCAGTGCCAGTAGCCGCCCCTAGCCATCACCACCACCACCACCATCATCATCACCCGCCGAGCCAGTCTCCGATTTACCATCACCATTCACATTCCCCTGCTCCTTCCCCTGTTTACGCACCTCCCCCTCCGGCTCACTACGCTCCGGTTCCCTCTCCGGTTCAACCACCCAAACGGTCCACCTACATCCCAAGAAGCTTTGTTGAAGTCCAAGGTGTTGTTTATTGCAAGTCTTGCCATTATCCTGGTGTTGATACTCTTCTTGGAGCTAAACCCCTAAACGGTCAGTTCCAAAACCGTCAAAAGTTTTAACCGTCGTTAACGGAGCTGTTAAAGTACTGTAACTGACTTCTTCCTTTGTACAATGCAGGTGCTACAGTTAAGCTGTCATGCAAGAACACCAAATACGCTCCAACGGTGGAAACCGCCACTACTGACAAGAATGGGTACTTCCGGCTGGCAGCGCCGAAGAACGTAACGAGCTACGCATTCCATCGGTGCAAGGTTTATCTGGTGAAGTCGCCGGACAGCAGCTGCAATAAGATGTCGAAAATGAATGGCGGAGAGGACGGGGCGGAGTTGAAGCCAGCAAAGGCATTCACGGACGCCGAGAAGAAACCGGTTGTGCTCTACAATGTTGGGCCATTGGCTTTTGAACCTACCTGCGCTCGTTGA

mRNA sequence

ATGGGTTCTGTCGCTACCGGTGCTGTCATTGTCCTCCTGCTTGGCTGCGCCCTCAATGCATTCCAAGCGGCTGCAAGCCACGGCAGCCCTACTCTGGCACCAAGGCCAGATGACCGTCACTACCCAGTGCCAGTAGCCGCCCCTAGCCATCACCACCACCACCACCATCATCATCACCCGCCGAGCCAGTCTCCGATTTACCATCACCATTCACATTCCCCTGCTCCTTCCCCTGTTTACGCACCTCCCCCTCCGGCTCACTACGCTCCGGTTCCCTCTCCGGTTCAACCACCCAAACGGTCCACCTACATCCCAAGAAGCTTTGTTGAAGTCCAAGGTGTTGTTTATTGCAAGTCTTGCCATTATCCTGGTGTTGATACTCTTCTTGGAGCTAAACCCCTAAACGGTGCTACAGTTAAGCTGTCATGCAAGAACACCAAATACGCTCCAACGGTGGAAACCGCCACTACTGACAAGAATGGGTACTTCCGGCTGGCAGCGCCGAAGAACGTAACGAGCTACGCATTCCATCGGTGCAAGGTTTATCTGGTGAAGTCGCCGGACAGCAGCTGCAATAAGATGTCGAAAATGAATGGCGGAGAGGACGGGGCGGAGTTGAAGCCAGCAAAGGCATTCACGGACGCCGAGAAGAAACCGGTTGTGCTCTACAATGTTGGGCCATTGGCTTTTGAACCTACCTGCGCTCGTTGA

Coding sequence (CDS)

ATGGGTTCTGTCGCTACCGGTGCTGTCATTGTCCTCCTGCTTGGCTGCGCCCTCAATGCATTCCAAGCGGCTGCAAGCCACGGCAGCCCTACTCTGGCACCAAGGCCAGATGACCGTCACTACCCAGTGCCAGTAGCCGCCCCTAGCCATCACCACCACCACCACCATCATCATCACCCGCCGAGCCAGTCTCCGATTTACCATCACCATTCACATTCCCCTGCTCCTTCCCCTGTTTACGCACCTCCCCCTCCGGCTCACTACGCTCCGGTTCCCTCTCCGGTTCAACCACCCAAACGGTCCACCTACATCCCAAGAAGCTTTGTTGAAGTCCAAGGTGTTGTTTATTGCAAGTCTTGCCATTATCCTGGTGTTGATACTCTTCTTGGAGCTAAACCCCTAAACGGTGCTACAGTTAAGCTGTCATGCAAGAACACCAAATACGCTCCAACGGTGGAAACCGCCACTACTGACAAGAATGGGTACTTCCGGCTGGCAGCGCCGAAGAACGTAACGAGCTACGCATTCCATCGGTGCAAGGTTTATCTGGTGAAGTCGCCGGACAGCAGCTGCAATAAGATGTCGAAAATGAATGGCGGAGAGGACGGGGCGGAGTTGAAGCCAGCAAAGGCATTCACGGACGCCGAGAAGAAACCGGTTGTGCTCTACAATGTTGGGCCATTGGCTTTTGAACCTACCTGCGCTCGTTGA

Protein sequence

MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHPPSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR
Homology
BLAST of Carg21504 vs. NCBI nr
Match: KAG7019613.1 (Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0

Query: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60
           MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP
Sbjct: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60

Query: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120
           PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC
Sbjct: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120

Query: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180
           HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK
Sbjct: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180

Query: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 237
           VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR
Sbjct: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 236

BLAST of Carg21504 vs. NCBI nr
Match: XP_022927607.1 (non-classical arabinogalactan protein 31-like [Cucurbita moschata])

HSP 1 Score: 471.9 bits (1213), Expect = 3.3e-129
Identity = 235/236 (99.58%), Postives = 236/236 (100.00%), Query Frame = 0

Query: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60
           MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP
Sbjct: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60

Query: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120
           PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC
Sbjct: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120

Query: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180
           HYPGVDTLLGAKPLNGATVKLSCKNTKYAPT+ETATTDKNGYFRLAAPKNVTSYAFHRCK
Sbjct: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTMETATTDKNGYFRLAAPKNVTSYAFHRCK 180

Query: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 237
           VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR
Sbjct: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 236

BLAST of Carg21504 vs. NCBI nr
Match: KAG6583991.1 (Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 0

Query: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60
           MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP
Sbjct: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60

Query: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120
           PSQSPIYHH SHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC
Sbjct: 61  PSQSPIYHHRSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120

Query: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180
           HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK
Sbjct: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180

Query: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 237
           VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR
Sbjct: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 236

BLAST of Carg21504 vs. NCBI nr
Match: XP_023001750.1 (non-classical arabinogalactan protein 31-like [Cucurbita maxima])

HSP 1 Score: 428.7 bits (1101), Expect = 3.2e-116
Identity = 219/235 (93.19%), Postives = 224/235 (95.32%), Query Frame = 0

Query: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60
           MGSVAT AVIVLLLGCALNAFQAAA+HGSPT APRPDDRHYPVPVAAPS   HHHHHHHP
Sbjct: 1   MGSVATCAVIVLLLGCALNAFQAAANHGSPTPAPRPDDRHYPVPVAAPS---HHHHHHHP 60

Query: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120
           PSQSPIYHHH+HSPAPSPVYAPPPPAHYA    PVQPPKRSTYIPRSFVEVQGVVYCKSC
Sbjct: 61  PSQSPIYHHHAHSPAPSPVYAPPPPAHYA----PVQPPKRSTYIPRSFVEVQGVVYCKSC 120

Query: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180
           HYPGVDTLLGAKPLNGA VKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK
Sbjct: 121 HYPGVDTLLGAKPLNGAAVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180

Query: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 236
           V+LVKSPDSSC+KMSKMNGG DGAELKPAKAFTDAEKKPVVLYNVGPLAFEP+CA
Sbjct: 181 VHLVKSPDSSCSKMSKMNGGVDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPSCA 228

BLAST of Carg21504 vs. NCBI nr
Match: XP_023519972.1 (non-classical arabinogalactan protein 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.2 bits (1097), Expect = 9.4e-116
Identity = 217/236 (91.95%), Postives = 220/236 (93.22%), Query Frame = 0

Query: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60
           M SVATGAVIVLLLGCALNAFQAAA+HGSPT APRPDDRHYPVPVAAPSHHHH       
Sbjct: 1   MASVATGAVIVLLLGCALNAFQAAANHGSPTPAPRPDDRHYPVPVAAPSHHHH------- 60

Query: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120
                  HHHSH+PAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC
Sbjct: 61  -------HHHSHAPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120

Query: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180
           HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK
Sbjct: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180

Query: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 237
           VYLVKSPDSSC+KMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR
Sbjct: 181 VYLVKSPDSSCSKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 222

BLAST of Carg21504 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 4.5e-36
Identity = 102/213 (47.89%), Postives = 122/213 (57.28%), Query Frame = 0

Query: 30  PTLAPRPDDRHYPV--PVAAPSHHHHHHHHHHPPSQSPIYHHHSHSPAPSPVYAPPPPAH 89
           PT AP       PV  PV+ P+          PP + P+Y      P  +PV  P  P  
Sbjct: 167 PTKAPVKPPTKPPVKPPVSPPA---------KPPVKPPVY-----PPTKAPVKPPVSPPT 226

Query: 90  YAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTK 149
             PV  PV PPK      RS V V+G VYCKSC Y   +TLLGAKP+ GATVKL CK+ K
Sbjct: 227 KPPVTPPVYPPK----FNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKK 286

Query: 150 YAPTVETATTDKNGYFRLAAPKNVTSYAFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELK 209
              T ET TTDKNGYF L APK VT++ F  C+VYLVKS D  C+K+SK+ GG+ GAELK
Sbjct: 287 NI-TAET-TTDKNGYFLLLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELK 346

Query: 210 P----AKAFTDAEKKPVVLYNVGPLAFEPTCAR 237
           P     K+     K    L+NVGP AF P+C +
Sbjct: 347 PEKKLGKSTVVVNKLVYGLFNVGPFAFNPSCPK 359

BLAST of Carg21504 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29
Identity = 79/189 (41.80%), Postives = 112/189 (59.26%), Query Frame = 0

Query: 60  PPSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIP--------RSFVEV 119
           PP+++PI    ++ PA +P+  P  P   AP+  P  PP +   +P        ++ V V
Sbjct: 54  PPAKAPI-KLPAYPPAKAPIKLPTLPPAKAPIKLPTLPPIKPPVLPPVYPPKYNKTLVAV 113

Query: 120 QGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNV 179
           +GVVYCK+C Y GV+ + GAKP+  A V+L CKN K   ++    TDKNGYF L APK V
Sbjct: 114 RGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKK--NSISETKTDKNGYFMLLAPKTV 173

Query: 180 TSYAFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPA--KAFTDAEKK--PVVLYNVGP 237
           T+Y    C+ +LVKSPD+ C+K+S ++ G  G+ LKP     F+    +     +YNVGP
Sbjct: 174 TNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVGP 233

BLAST of Carg21504 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.6e-17
Identity = 94/257 (36.58%), Postives = 111/257 (43.19%), Query Frame = 0

Query: 22  QAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP-----PSQSPIYHHHSHSPAP 81
           Q+A     P  A +P     P PV APS          P     PS SP     +  P P
Sbjct: 163 QSAKQPPQPPPAKQPSPPPPPPPVKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPP 222

Query: 82  ------SPVYAPPPPAHYAPV----PSPV----------QPPKRSTYIPRSFVE------ 141
                 SP+  PPPP  Y PV    PSP            PP     IPR          
Sbjct: 223 PPRAKKSPLLPPPPPVAYPPVMTPSPSPAAEPPIIAPFPSPPANPPLIPRRPAPPVVKPL 282

Query: 142 --------VQGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGY 201
                   V G+VYCKSC+  GV TLL A  L GA VKL C   K    V+ ATTD  G 
Sbjct: 283 PPLGKPPIVSGLVYCKSCNSYGVPTLLNASLLQGAVVKLICYGKK--TMVQWATTDNKGE 342

Query: 202 FRLAAPKNVTSYAFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKP--------AKAFTD 232
           FR+  PK++T+    +CKVYLVKSP+ +CN  +  NGG+ G  LKP          A   
Sbjct: 343 FRI-MPKSLTTADVGKCKVYLVKSPNPNCNVPTNFNGGKSGGLLKPLLPPKQPITPAVVP 402

BLAST of Carg21504 vs. ExPASy TrEMBL
Match: A0A6J1EHN2 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111434378 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.6e-129
Identity = 235/236 (99.58%), Postives = 236/236 (100.00%), Query Frame = 0

Query: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60
           MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP
Sbjct: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60

Query: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120
           PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC
Sbjct: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120

Query: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180
           HYPGVDTLLGAKPLNGATVKLSCKNTKYAPT+ETATTDKNGYFRLAAPKNVTSYAFHRCK
Sbjct: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTMETATTDKNGYFRLAAPKNVTSYAFHRCK 180

Query: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 237
           VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR
Sbjct: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCAR 236

BLAST of Carg21504 vs. ExPASy TrEMBL
Match: A0A6J1KM21 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111495792 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.6e-116
Identity = 219/235 (93.19%), Postives = 224/235 (95.32%), Query Frame = 0

Query: 1   MGSVATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHHP 60
           MGSVAT AVIVLLLGCALNAFQAAA+HGSPT APRPDDRHYPVPVAAPS   HHHHHHHP
Sbjct: 1   MGSVATCAVIVLLLGCALNAFQAAANHGSPTPAPRPDDRHYPVPVAAPS---HHHHHHHP 60

Query: 61  PSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSC 120
           PSQSPIYHHH+HSPAPSPVYAPPPPAHYA    PVQPPKRSTYIPRSFVEVQGVVYCKSC
Sbjct: 61  PSQSPIYHHHAHSPAPSPVYAPPPPAHYA----PVQPPKRSTYIPRSFVEVQGVVYCKSC 120

Query: 121 HYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180
           HYPGVDTLLGAKPLNGA VKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK
Sbjct: 121 HYPGVDTLLGAKPLNGAAVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFHRCK 180

Query: 181 VYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 236
           V+LVKSPDSSC+KMSKMNGG DGAELKPAKAFTDAEKKPVVLYNVGPLAFEP+CA
Sbjct: 181 VHLVKSPDSSCSKMSKMNGGVDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPSCA 228

BLAST of Carg21504 vs. ExPASy TrEMBL
Match: A0A5A7URZ5 (Non-classical arabinogalactan protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00870 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.7e-92
Identity = 187/244 (76.64%), Postives = 203/244 (83.20%), Query Frame = 0

Query: 1   MGSVATGA--VIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHH-HHHH 60
           M S+   A  +++LLL C+LNAFQAAA   +P  AP   + H+PV   APS HHH HHHH
Sbjct: 1   MASLTANASFLVLLLLCCSLNAFQAAAYSSTPAPAPTHHNAHHPVAAPAPSFHHHGHHHH 60

Query: 61  HHPPSQSPIYHHHSH--SPAPSPVYAPPPPAHYA----PVPSPVQPPKRSTYIPRSFVEV 120
           HH PSQSP  HHH H  SPAPSPVY  PP AHYA    PVPSPV  PK STY+PRSFVEV
Sbjct: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFVEV 120

Query: 121 QGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNV 180
           QGVVYCKSC YPGVDTLLGAKPL+GATVKLSCKNTKYAPTVETAT+DKNGYFRLAAPKNV
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 181 TSYAFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFE 236
           TSYAFHRCKVYLV+SPDS+C K SK+NGGEDGAELKPA+AFTD EKKPVVLYNVGPLAFE
Sbjct: 181 TSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240

BLAST of Carg21504 vs. ExPASy TrEMBL
Match: A0A1S3B5Q3 (non-classical arabinogalactan protein 31 OS=Cucumis melo OX=3656 GN=LOC103486459 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.7e-92
Identity = 187/244 (76.64%), Postives = 203/244 (83.20%), Query Frame = 0

Query: 1   MGSVATGA--VIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHH-HHHH 60
           M S+   A  +++LLL C+LNAFQAAA   +P  AP   + H+PV   APS HHH HHHH
Sbjct: 1   MASLTANASFLVLLLLCCSLNAFQAAAYSSTPAPAPTHHNAHHPVAAPAPSFHHHGHHHH 60

Query: 61  HHPPSQSPIYHHHSH--SPAPSPVYAPPPPAHYA----PVPSPVQPPKRSTYIPRSFVEV 120
           HH PSQSP  HHH H  SPAPSPVY  PP AHYA    PVPSPV  PK STY+PRSFVEV
Sbjct: 61  HHSPSQSPTSHHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFVEV 120

Query: 121 QGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNV 180
           QGVVYCKSC YPGVDTLLGAKPL+GATVKLSCKNTKYAPTVETAT+DKNGYFRLAAPKNV
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 181 TSYAFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFE 236
           TSYAFHRCKVYLV+SPDS+C K SK+NGGEDGAELKPA+AFTD EKKPVVLYNVGPLAFE
Sbjct: 181 TSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLAFE 240

BLAST of Carg21504 vs. ExPASy TrEMBL
Match: A0A0A0LXF0 (Structural constituent of cell wall OS=Cucumis sativus OX=3659 GN=Csa_1G074910 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 3.1e-88
Identity = 181/241 (75.10%), Postives = 193/241 (80.08%), Query Frame = 0

Query: 1   MGSVATGAVIVLLLGCA--LNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHH-HHHH 60
           M S+   A  +LLL C   LNAFQAAA   +P  AP   + H+PV    PS HH  HHHH
Sbjct: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHNAHHPVAAPTPSFHHRGHHHH 60

Query: 61  HHPPSQSPIYHHHSH--SPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVV 120
           HH P+QSP  HHH H  SPAPSPVY   PPAHYAPVPSP   PK ST IPRSFV+VQGVV
Sbjct: 61  HHSPTQSPTSHHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQGVV 120

Query: 121 YCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYA 180
           YCKSC YP VDTLLGAKPL+GATVKLSCKNTKYAP VETAT+D+NGYFRLAAPKNVTSYA
Sbjct: 121 YCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTSYA 180

Query: 181 FHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 237
           FHRCKVYLVKSPDS C K SKMNGG DGAELKPA+AFTD EKKPVVLYNVGPLAFEPTC+
Sbjct: 181 FHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPTCS 240

BLAST of Carg21504 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 )

HSP 1 Score: 152.9 bits (385), Expect = 3.2e-37
Identity = 102/213 (47.89%), Postives = 122/213 (57.28%), Query Frame = 0

Query: 30  PTLAPRPDDRHYPV--PVAAPSHHHHHHHHHHPPSQSPIYHHHSHSPAPSPVYAPPPPAH 89
           PT AP       PV  PV+ P+          PP + P+Y      P  +PV  P  P  
Sbjct: 167 PTKAPVKPPTKPPVKPPVSPPA---------KPPVKPPVY-----PPTKAPVKPPVSPPT 226

Query: 90  YAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTK 149
             PV  PV PPK      RS V V+G VYCKSC Y   +TLLGAKP+ GATVKL CK+ K
Sbjct: 227 KPPVTPPVYPPK----FNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKK 286

Query: 150 YAPTVETATTDKNGYFRLAAPKNVTSYAFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELK 209
              T ET TTDKNGYF L APK VT++ F  C+VYLVKS D  C+K+SK+ GG+ GAELK
Sbjct: 287 NI-TAET-TTDKNGYFLLLAPKTVTNFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELK 346

Query: 210 P----AKAFTDAEKKPVVLYNVGPLAFEPTCAR 237
           P     K+     K    L+NVGP AF P+C +
Sbjct: 347 PEKKLGKSTVVVNKLVYGLFNVGPFAFNPSCPK 359

BLAST of Carg21504 vs. TAIR 10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-34
Identity = 76/147 (51.70%), Postives = 93/147 (63.27%), Query Frame = 0

Query: 93  SPVQPPKRSTYIPRSFVEVQGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTV 152
           SP+ PP     + R  V V+G+VYCKSC Y GVDTLL A PL GATVKL+C NTK   T+
Sbjct: 30  SPMTPPSSPAKMSRRLVAVEGMVYCKSCKYSGVDTLLEASPLQGATVKLACNNTKRGVTM 89

Query: 153 ETATTDKNGYFRLAAPKNVTSYAFHRCKVYLVK----SPDSSCNKMSKMNGGEDGAELKP 212
           ET  TDKNGYF + APK +T+YAFH C+ +       +   +C   SK+N G  GA LKP
Sbjct: 90  ET-KTDKNGYFFMLAPKKLTTYAFHTCRAWPTNPGPTTATMTCTVPSKLNNGITGAMLKP 149

Query: 213 AKAFTDAEKKPVVLYNVGPLAFEPTCA 236
           +K     E    VL++VGP AFEP CA
Sbjct: 150 SKTINIGE-HDYVLFSVGPFAFEPACA 174

BLAST of Carg21504 vs. TAIR 10
Match: AT1G28290.2 (arabinogalactan protein 31 )

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-32
Identity = 117/317 (36.91%), Postives = 146/317 (46.06%), Query Frame = 0

Query: 1   MGSVATGAVIVLL-LGC-ALNAFQAAASH--GSPTLAPRPDDRHYPVPVAAPSHHH--HH 60
           MG +    ++ L+ L C   + F    +H   +P+LAP P   H+      P HHH  H 
Sbjct: 1   MGFIGKSVLVSLVALWCFTSSVFTEEVNHKTQTPSLAPAPAPYHHGHHHPHPPHHHHPHP 60

Query: 61  HHHHHPPSQSPI------------------------------------------------ 120
           H H HPP++SP+                                                
Sbjct: 61  HPHPHPPAKSPVKPPVKAPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPV 120

Query: 121 -----------YHHHSHSPAPSPVYAPPPPAHY----APVPSPVQPPKRSTYIP------ 180
                          +  P   PVY P  P  Y    APV  PV PP +    P      
Sbjct: 121 KPPVYPPTKAPVKPPTKPPVKPPVYPPTKPPVYPPTKAPVKPPVSPPTKPPVTPPVYPPK 180

Query: 181 --RSFVEVQGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYF 237
             RS V V+G VYCKSC Y   +TLLGAKP+ GATVKL CK+ K   T ET TTDKNGYF
Sbjct: 181 FNRSLVAVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNI-TAET-TTDKNGYF 240

BLAST of Carg21504 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 )

HSP 1 Score: 131.7 bits (330), Expect = 7.6e-31
Identity = 79/189 (41.80%), Postives = 112/189 (59.26%), Query Frame = 0

Query: 60  PPSQSPIYHHHSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIP--------RSFVEV 119
           PP+++PI    ++ PA +P+  P  P   AP+  P  PP +   +P        ++ V V
Sbjct: 54  PPAKAPI-KLPAYPPAKAPIKLPTLPPAKAPIKLPTLPPIKPPVLPPVYPPKYNKTLVAV 113

Query: 120 QGVVYCKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNV 179
           +GVVYCK+C Y GV+ + GAKP+  A V+L CKN K   ++    TDKNGYF L APK V
Sbjct: 114 RGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKK--NSISETKTDKNGYFMLLAPKTV 173

Query: 180 TSYAFHRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPA--KAFTDAEKK--PVVLYNVGP 237
           T+Y    C+ +LVKSPD+ C+K+S ++ G  G+ LKP     F+    +     +YNVGP
Sbjct: 174 TNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVGP 233

BLAST of Carg21504 vs. TAIR 10
Match: AT5G05500.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-12
Identity = 49/159 (30.82%), Postives = 71/159 (44.65%), Query Frame = 0

Query: 80  YAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVYCKSCHYPGVDTLLGAKPLNGATV 139
           Y PPPP      P+   P  ++         V+G+VYC+SC   G  +L GA+ + GA +
Sbjct: 24  YTPPPPP-----PTTAYPAVKTVE-----AAVEGMVYCQSCDKFGSWSLAGAEAIAGAKI 83

Query: 140 KLSCKNTKYAPT-VETATTDKNGYF-----RLAAPKNVTSYAFHRCKVYLVKSPDSSCNK 199
            + CKN +   +  +   TD  G+F           +   +  H C+  LV SP   CN 
Sbjct: 84  SIICKNHRQQVSFYKVFRTDSYGHFYGELKGFKMTPHFLDHPLHSCRAKLVSSPREDCNL 143

Query: 200 MSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEP 233
            S +N   DGA L+  +          V+Y  GPLAF P
Sbjct: 144 FSNINNALDGAPLRYEEKRLKWTNYEAVIYAAGPLAFRP 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7019613.11.5e-129100.00Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp.... [more]
XP_022927607.13.3e-12999.58non-classical arabinogalactan protein 31-like [Cucurbita moschata][more]
KAG6583991.11.3e-12899.58Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp.... [more]
XP_023001750.13.2e-11693.19non-classical arabinogalactan protein 31-like [Cucurbita maxima][more]
XP_023519972.19.4e-11691.95non-classical arabinogalactan protein 31-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9FZA24.5e-3647.89Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP3... [more]
P930131.1e-2941.80Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP3... [more]
Q032113.6e-1736.58Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1EHN21.6e-12999.58non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1KM211.6e-11693.19non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A5A7URZ52.7e-9276.64Non-classical arabinogalactan protein 31 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3B5Q32.7e-9276.64non-classical arabinogalactan protein 31 OS=Cucumis melo OX=3656 GN=LOC103486459... [more]
A0A0A0LXF03.1e-8875.10Structural constituent of cell wall OS=Cucumis sativus OX=3659 GN=Csa_1G074910 P... [more]
Match NameE-valueIdentityDescription
AT1G28290.13.2e-3747.89arabinogalactan protein 31 [more]
AT2G34700.12.5e-3451.70Pollen Ole e 1 allergen and extensin family protein [more]
AT1G28290.21.4e-3236.91arabinogalactan protein 31 [more]
AT2G33790.17.6e-3141.80arabinogalactan protein 30 [more]
AT5G05500.14.6e-1230.82Pollen Ole e 1 allergen and extensin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003882Pistil-specific extensin-like proteinPRINTSPR01218PSTLEXTENSINcoord: 120..144
score: 56.0
coord: 221..236
score: 33.33
coord: 60..83
score: 25.0
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_1coord: 111..203
e-value: 1.2E-26
score: 92.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..96
NoneNo IPR availablePANTHERPTHR33470OS01G0164075 PROTEINcoord: 16..234
NoneNo IPR availablePANTHERPTHR33470:SF22POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEINcoord: 16..234

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21504-RACarg21504-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0071944 cell periphery