Carg21503 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTACGAATTATAAAACCCTTTGCGAACTGCAAAATTTCCTCAACGATTTTTTTCATGGTGTTTTGTTGCTGCAATGATATAGATATGGCTCCAATGGTGCCGGAGACTCCATCGTTTTGTGTATCTCCTGGTGAGTTTCTTCTTTATTTTCTCTCATAATCTTTTGTTTCCGTTTTTGGGTCATATACTGATTGCATTTTCTTGATTTTGCTTACGGTTCATTTTGTGTTCGAACAATGATTGTGGGTGTTGTTTATGTGAATCGACGGCTAATGTGATTATAAGTTTTTCCGTAGTATGGATTCGATTGTTTTCTTTTGCCTTGTTGATTCAATTTGTTTATTGGAATTCTGGTGTGGGATTTTCCAGACGTAGGAACGCGAGGTCGTTTGACTTCTTGAGGCCAACAGTGTAGGTTTGAAAAGAGGAAGAGGTTGTTCAGACAATGTGGCTGAGGGTTCGAGGGAGAGACTTCGACTTGGGTGCTCCGAGATTGAGAATTTCTCTTGGATTTTGATGGGATATCTTGGTTTTCAAGGGATTTTGGTTTCAATGGAGATGAGGTTATTGGTTGAGACGATTTTGTTCTTGATTGATCTTCACAGCTTTGATTAGCCCTCTTAAGCTTCCGCTAAACAAGAACAATTTCTGTTTCTATGTTCGTGTTGCGTCCTGTTTTCTTTATAGTAGGTGGGGGTTTGTTGATTGAGAGTCTTGATTAGATTCTTTGTTTTTGAGCCTTTTGAAAGCCATGGAGGAAGATCCTAATTCTTGGCTAAGAAGAACCAAGTTTTCTCACACAATATGCTATCGTTTAGAGTCCTTACGATTGGCTTCCTTTCCTGCCGCCACTCACCCACCACTCAACTCAGTTGCACAATCAAGATCTCATGTTCTTAACAAGCAGAGGTCCTTGTCTCCGGCTCCGTCTCCGTCTCCACAAACTACACTTTCCGATGCATTTAAGAGTGCACGTACCGATCAGAAGCGGTTTTCAACGCCGCCGCCTCAGAGGAAGGCACCTGGAAAAGAGAAGGGTAGAAGACTATTTAGTAAAAAAGCCAAGGAGCGCAATTCCTTAAAGGAAGAGAAGTTAAAAGGCCTTCTGAGGCATTTTGCCTCATTTAAAGGCAATGGGAAGTCCAAGTTCAAGGAGTCTTCTTGGACAAGGTTTTTTGAGCACAATGGGGGGAAGGTCACCGCTGTCGAGGCTGTAGATGAATCGTCTATTGACCTGTCCAAGTTGAGTTTCGGGCATAAATTTGCTTTCGGAGCTCATAGTCGGCTTTACCATGGACTTTACGAAGATAATGTTGTTGCTGCTAAGATGATCAATCTTCCAGTCGATGACGAAAATGGAGAACTCGCAGGTCGCTTAAAAAAGCAGTTTGATAGGGAAGTAACCCTTTTATCTCGTCTCCGCCATCCCAACGTTATAAAGGTGAGCATCTTGCTCCTTGATTGATGACAAGTTCATCTGAATTACCTTTTCTTAGGTTAGTTTTGAGGTGTTTTTAATGTTTGTATGAGTTCCCAGTTGCTGCTTGAAAAGAAAAGTATCTGTGTTATGAATTATGCATGAACAGTATTGTATTTGTCATTGATTTACAGTTGGTAGCAGCCGTGAAAATGCCACCCGTTTATTGCATCATCACTGAGTATCTACCTCTGGGTTCCTTAAGGGCATATCTTCACAAACTTGAAAAAAAATCTCTCCCATTGCAAAAACTATTTGCTATTGCCTTGGACATTGCTCGTGGGATGGAATACATTCACTCACAAGGCGTCGTTCATCGGGATCTCAAACCTGAAAACGTTCTTATTGATGAAAACTTTTGTCTAAAGATTGCCGATTTCGGCATCGCTTGTGAGGAGGCACGTTGTGATACACTAGCGGAGGACCCTGGAACTTTTCGTTGGATGGCCCCCGAGATGATCAAACGTAAACCTTATGGAAGAAAGGTTGATATGTACAGCTTCGGACTCATCCTGTGGGAATTAGTAGCTGGAAAAATCCCTTATGAGGATATGACTCCCATCCAAGCAGCTTTTGCAGTTGTAGATAAGGTATTTTTATTGTTAAGCACCATCTTTTTATTTACCAACTTATCTGTTCTGTAACACTGTTGGGGCTGTATGGTTCAGAATATTAGACCGGCGATCCCGAGCGAGTGTCCTCCAGTGATGCAGGCGTTAATGGAGCAATGTTGGTCCACACAACCAGAAGAGAGGCCGGAGTTTTGGCAGGTGGTAAAAGTATTAGAGCAGCTTGAGAGTTGTGTTTGAAGGGAAGTTGGGAAGATCACAAGAAAGGGTCTAAAGCAACATGGGTTGGTCCCCTCTTCATTCTCATAATTCTCTCACCTCCACACCTAAATTCATATGAATCTTTCTCTGTGCGCTTTTAGCTTTTCTTGAAAATATCATGTTGGCTCCCCAGGTTCATTGTAGATAAAAAGAAACAAAACTTTTGCAGTTTTTTTTGGTTCCTTCAATTGTTTCTGTTTCTAACATTCACATGACTGAAATGAATACGTTTCTGACGATATTTTTGGAATTCTCCTCTCAGAATTGTGAACTTATCTGTTCCTTTGCACTTTATTTC TTTACGAATTATAAAACCCTTTGCGAACTGCAAAATTTCCTCAACGATTTTTTTCATGGTGTTTTGTTGCTGCAATGATATAGATATGGCTCCAATGGTGCCGGAGACTCCATCGTTTTGTGTATCTCCTGAGTCCTTACGATTGGCTTCCTTTCCTGCCGCCACTCACCCACCACTCAACTCAGTTGCACAATCAAGATCTCATGTTCTTAACAAGCAGAGGTCCTTGTCTCCGGCTCCGTCTCCGTCTCCACAAACTACACTTTCCGATGCATTTAAGAGTGCACGTACCGATCAGAAGCGGTTTTCAACGCCGCCGCCTCAGAGGAAGGCACCTGGAAAAGAGAAGGGTAGAAGACTATTTAGTAAAAAAGCCAAGGAGCGCAATTCCTTAAAGGAAGAGAAGTTAAAAGGCCTTCTGAGGCATTTTGCCTCATTTAAAGGCAATGGGAAGTCCAAGTTCAAGGAGTCTTCTTGGACAAGGTTTTTTGAGCACAATGGGGGGAAGGTCACCGCTGTCGAGGCTGTAGATGAATCGTCTATTGACCTGTCCAAGTTGAGTTTCGGGCATAAATTTGCTTTCGGAGCTCATAGTCGGCTTTACCATGGACTTTACGAAGATAATGTTGTTGCTGCTAAGATGATCAATCTTCCAGTCGATGACGAAAATGGAGAACTCGCAGGTCGCTTAAAAAAGCAGTTTGATAGGGAAGTAACCCTTTTATCTCGTCTCCGCCATCCCAACGTTATAAAGGTTGATATGTACAGCTTCGGACTCATCCTGTGGGAATTAGTAGCTGGAAAAATCCCTTATGAGGATATGACTCCCATCCAAGCAGCTTTTGCAGTTGTAGATAAGAATATTAGACCGGCGATCCCGAGCGAGTGTCCTCCAGTGATGCAGGCGTTAATGGAGCAATGTTGGTCCACACAACCAGAAGAGAGGCCGGAGTTTTGGCAGGTGGTAAAAGTATTAGAGCAGCTTGAGAGTTGTGTTTGAAGGGAAGTTGGGAAGATCACAAGAAAGGGTCTAAAGCAACATGGGTTGGTCCCCTCTTCATTCTCATAATTCTCTCACCTCCACACCTAAATTCATATGAATCTTTCTCTGTGCGCTTTTAGCTTTTCTTGAAAATATCATGTTGGCTCCCCAGGTTCATTGTAGATAAAAAGAAACAAAACTTTTGCAGTTTTTTTTGGTTCCTTCAATTGTTTCTGTTTCTAACATTCACATGACTGAAATGAATACGTTTCTGACGATATTTTTGGAATTCTCCTCTCAGAATTGTGAACTTATCTGTTCCTTTGCACTTTATTTC ATGGTGTTTTGTTGCTGCAATGATATAGATATGGCTCCAATGGTGCCGGAGACTCCATCGTTTTGTGTATCTCCTGAGTCCTTACGATTGGCTTCCTTTCCTGCCGCCACTCACCCACCACTCAACTCAGTTGCACAATCAAGATCTCATGTTCTTAACAAGCAGAGGTCCTTGTCTCCGGCTCCGTCTCCGTCTCCACAAACTACACTTTCCGATGCATTTAAGAGTGCACGTACCGATCAGAAGCGGTTTTCAACGCCGCCGCCTCAGAGGAAGGCACCTGGAAAAGAGAAGGGTAGAAGACTATTTAGTAAAAAAGCCAAGGAGCGCAATTCCTTAAAGGAAGAGAAGTTAAAAGGCCTTCTGAGGCATTTTGCCTCATTTAAAGGCAATGGGAAGTCCAAGTTCAAGGAGTCTTCTTGGACAAGGTTTTTTGAGCACAATGGGGGGAAGGTCACCGCTGTCGAGGCTGTAGATGAATCGTCTATTGACCTGTCCAAGTTGAGTTTCGGGCATAAATTTGCTTTCGGAGCTCATAGTCGGCTTTACCATGGACTTTACGAAGATAATGTTGTTGCTGCTAAGATGATCAATCTTCCAGTCGATGACGAAAATGGAGAACTCGCAGGTCGCTTAAAAAAGCAGTTTGATAGGGAAGTAACCCTTTTATCTCGTCTCCGCCATCCCAACGTTATAAAGGTTGATATGTACAGCTTCGGACTCATCCTGTGGGAATTAGTAGCTGGAAAAATCCCTTATGAGGATATGACTCCCATCCAAGCAGCTTTTGCAGTTGTAGATAAGAATATTAGACCGGCGATCCCGAGCGAGTGTCCTCCAGTGATGCAGGCGTTAATGGAGCAATGTTGGTCCACACAACCAGAAGAGAGGCCGGAGTTTTGGCAGGTGGTAAAAGTATTAGAGCAGCTTGAGAGTTGTGTTTGA MVFCCCNDIDMAPMVPETPSFCVSPESLRLASFPAATHPPLNSVAQSRSHVLNKQRSLSPAPSPSPQTTLSDAFKSARTDQKRFSTPPPQRKAPGKEKGRRLFSKKAKERNSLKEEKLKGLLRHFASFKGNGKSKFKESSWTRFFEHNGGKVTAVEAVDESSIDLSKLSFGHKFAFGAHSRLYHGLYEDNVVAAKMINLPVDDENGELAGRLKKQFDREVTLLSRLRHPNVIKVDMYSFGLILWELVAGKIPYEDMTPIQAAFAVVDKNIRPAIPSECPPVMQALMEQCWSTQPEERPEFWQVVKVLEQLESCV Homology
BLAST of Carg21503 vs. NCBI nr
Match: KAG7019614.1 (Serine/threonine-protein kinase HT1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 624.8 bits (1610), Expect = 4.1e-175 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of Carg21503 vs. NCBI nr
Match: KAG6583992.1 (Serine/threonine/tyrosine-protein kinase HT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 510.4 bits (1313), Expect = 1.1e-140 Identity = 286/412 (69.42%), Postives = 288/412 (69.90%), Query Frame = 0
BLAST of Carg21503 vs. NCBI nr
Match: XP_023001722.1 (serine/threonine-protein kinase HT1-like [Cucurbita maxima]) HSP 1 Score: 502.7 bits (1293), Expect = 2.3e-138 Identity = 283/412 (68.69%), Postives = 286/412 (69.42%), Query Frame = 0
BLAST of Carg21503 vs. NCBI nr
Match: XP_008442647.1 (PREDICTED: serine/threonine-protein kinase HT1-like [Cucumis melo]) HSP 1 Score: 378.3 bits (970), Expect = 6.7e-101 Identity = 224/415 (53.98%), Postives = 245/415 (59.04%), Query Frame = 0
BLAST of Carg21503 vs. NCBI nr
Match: XP_038876996.1 (serine/threonine/tyrosine-protein kinase HT1-like [Benincasa hispida] >XP_038876997.1 serine/threonine/tyrosine-protein kinase HT1-like [Benincasa hispida]) HSP 1 Score: 378.3 bits (970), Expect = 6.7e-101 Identity = 231/415 (55.66%), Postives = 247/415 (59.52%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy Swiss-Prot
Match: Q2MHE4 (Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.1e-28 Identity = 79/273 (28.94%), Postives = 112/273 (41.03%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy Swiss-Prot
Match: Q9ZQ31 (Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 1.5e-23 Identity = 73/271 (26.94%), Postives = 111/271 (40.96%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy Swiss-Prot
Match: O22558 (Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 1.4e-16 Identity = 35/78 (44.87%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy Swiss-Prot
Match: Q8RWL6 (Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana OX=3702 GN=STY17 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.0e-16 Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy Swiss-Prot
Match: F4JTP5 (Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana OX=3702 GN=STY46 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-15 Identity = 34/78 (43.59%), Postives = 55/78 (70.51%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy TrEMBL
Match: A0A6J1KHF2 (serine/threonine-protein kinase HT1-like OS=Cucurbita maxima OX=3661 GN=LOC111495774 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 1.1e-138 Identity = 283/412 (68.69%), Postives = 286/412 (69.42%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy TrEMBL
Match: A0A1S3B6U5 (serine/threonine-protein kinase HT1-like OS=Cucumis melo OX=3656 GN=LOC103486451 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 3.2e-101 Identity = 224/415 (53.98%), Postives = 245/415 (59.04%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy TrEMBL
Match: A0A5A7UTW7 (Serine/threonine-protein kinase HT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00860 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 9.4e-101 Identity = 223/409 (54.52%), Postives = 243/409 (59.41%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy TrEMBL
Match: A0A0A0LRX5 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G074900 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.6e-100 Identity = 222/415 (53.49%), Postives = 247/415 (59.52%), Query Frame = 0
BLAST of Carg21503 vs. ExPASy TrEMBL
Match: A0A6J1CDY2 (serine/threonine-protein kinase HT1-like OS=Momordica charantia OX=3673 GN=LOC111010663 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 9.4e-93 Identity = 212/424 (50.00%), Postives = 244/424 (57.55%), Query Frame = 0
BLAST of Carg21503 vs. TAIR 10
Match: AT5G58950.1 (Protein kinase superfamily protein ) HSP 1 Score: 231.5 bits (589), Expect = 9.4e-61 Identity = 146/377 (38.73%), Postives = 187/377 (49.60%), Query Frame = 0
BLAST of Carg21503 vs. TAIR 10
Match: AT3G46930.1 (Protein kinase superfamily protein ) HSP 1 Score: 180.3 bits (456), Expect = 2.5e-45 Identity = 130/393 (33.08%), Postives = 182/393 (46.31%), Query Frame = 0
BLAST of Carg21503 vs. TAIR 10
Match: AT1G62400.1 (Protein kinase superfamily protein ) HSP 1 Score: 127.9 bits (320), Expect = 1.5e-29 Identity = 79/273 (28.94%), Postives = 112/273 (41.03%), Query Frame = 0
BLAST of Carg21503 vs. TAIR 10
Match: AT2G24360.1 (Protein kinase superfamily protein ) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-24 Identity = 73/271 (26.94%), Postives = 111/271 (40.96%), Query Frame = 0
BLAST of Carg21503 vs. TAIR 10
Match: AT4G31170.1 (Protein kinase superfamily protein ) HSP 1 Score: 108.2 bits (269), Expect = 1.2e-23 Identity = 73/271 (26.94%), Postives = 108/271 (39.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|