Carg21483 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg21483
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr13: 7390909 .. 7393731 (+)
RNA-Seq ExpressionCarg21483
SyntenyCarg21483
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTAGCAATGGCGATACTGTAAATTGGCGCAGTCAATTGGAATCTGAAACTTTCGGAAATTTCTGGGTTTAGCTAAAACAACCACTTCCGAAACGATGATTCTAATGGAATTTCTAATCCAAATTCCAAAGCCCCCTTTTCACCTTCTGGTAAACTGTGGAATTTTGTTGTGATGGTAATGGTAGCCCACACCTTCAATCTCTCTCTCTCTCTTCTGTCGCTGTTCTCTCTCTCTATATTACGAGTTTGGTAGCTGCTTAAGTTTTTGATAACACCGAAAAACCCTGAAACTTTTCCCTCCAATTCTTCTCCTTCATAATTAAGCTGCCATGAGCTACAAATCCAGCTATGTCGGAGCGGGGAAATTCGTCTGAAACTTTTGGGGATAATATGGGTGAAGAAGGTTATGGATGGTCCCCGACTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTGGAGGCACTTCGACAACTCCGTCGATGCAGTCTCTTTTGGTTTTGTTGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCTATCTTTGAAAGGTTTTTGCGACCTACTCCGACCGCTTTCTCTCACGCCGGCCGTCGGACCCACCTTGACCCTGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGGCCACCCATCACCCAAAGTGAGTTCGCCCAATTTGTCCCCCATCGGTTTCTATTTCGTTTTAGATTTTGCTGTTTATGTCTGAATTTTCTTATCTGGACTGTTGGATTCCCGGTATGAAAGCTGAAATGAATTGGGTTTAGATATCTGTTTTTCTTTTGGATCATAACATGCGAGTGTTTGGATATTCATAACTTAATTTTGACAAATTTGTACGTTATATCTATGACTTTTCTTCTAAATTGCATTCTAAAGGGCACCTTGAACATCAAGATGAGCTCGTAGTTCTTGCCTTCTCCCTGAATTTTGCAGTATTTCCTATGAACACTGAGTTTTATCAGCCTTATCTTTCTTCAACTCCATAAGGGGGTGGGGGGGACAACCTAGTGGGCGTATAATTCGTTATTTACTTTTTAGAATTCTCTTCCATTTCAAAATAAGCAATCTCATTATCACAGGACGGTATCATCCTGTAATTATGGATACTAGGCAAGGACATGGTAGTTGTTCGTTTAATGGTCACTTCTTGTTTTGCCACTTTCGGCCAAGTGCTTCTGATGTTTTGCCCCACCAACTCACTCATCATGTCAACCTCAATGCCTTCCATATCCCACATGCCCCTTGCCTCTGTCATGGCCATGGAGTCACTTTCCCCCCTTGTCTCGTTAGTATTCTCATACAATCAAATTGGTTAGACGAAGAATCGACTTGAGGATGATTTTTTTTTTTAATTTTACATCCTAAAATATAAAGTTGCTGGCTGAAACCGTGTCAAGAATTTGTGACACATCTGTAATCTATGGATGCAGCTTGCAGCCTTCAAAGAAACATATGAGGCCTACCTAGTTGTCCTGTCTAATTACTCAAGAACAGGGCTGATTCTTGTATGTGCAAAGGTGTTGGGAATACTAACAAGGGCATACTTTTAATTACCTAGAAGTTGTTTGAGTTGAGTGGCTATAAATAGAGTGAGTTTAGGGGTTTGGGAGGTACCTAGAATTTGGATCCCAGTTTTGGATTTAGTATCTCTACCATTTTCTGTTTTGGTTTTAGTAGTGATTTAACAGGAAATATAGTACTACTTCTAGTAATGGATTGTTGTATCTCAATACAAATTTGTGCTTTCTTTAAGCTACAAAAATGGTAAGCACTAATGAGGGAAGAAGAGATATACACCATAGATTGCTTCTTTAACTGGTCTATGATCGATTCCCTATAATTGTGAGGTCCAACATCGATTGGAGAGGAAAATGATTGTGAAGCTCGAAGGGGGGTGGACACGTTGGCGGTGGGCCAGCGAGGATGCTGGGTCCCGAAGGGGGTGGATTGTGAGTTCCCACGTTGATTGGAGAGAGAACAAGTGCACGTTGGGCCCTAAAAGGGGGTCGATTCTGAGATCCAATATTGATTGGAGAGGGAAACGATTGTCAGCGAGGACACTGGGCCTCGAAGAGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGCAGACTCGTTTTAAAAATCTTGAGGGGAAGCCTGAGAGGGAAAGCCCAAAGAGAACATTATTTGCTAGCGGTAGGCTCGGGCCATTAGAATAACATTGTAAGATCTCAAGACTTGCTGCTTTCTCGCAAGGGCCGACCCTTAGTGACAAAGTCATTGGCTGCTGCCCGTTTACAACGTGAGAAAAGTTATCCGTTTGTTTTGCAGTTCTGTTTGTCAAATATATTGTGCTGTTTCTTTATACTGCTGTCTGTCTTATGATATGTTGGACCTTGTCCTTTCCTCTTGAACTTGTCCTTTCATCTACAAGTAAGGAAGTTGATTACCGGTAAAATTCCAAAGGCATAACAATCTTCAGCCATCTACATTTTTGTTTTGTTTATATGCAGATGACTGTGTATTCCTGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCCGTCCCGTGTCCCCCTGAACGCATTCCATGGCCACAACATCAACATAATGACTTATCCTATGCCACAACCAGTTCCCATATCACTGAAAACTCGAGTTCCTTATGAGATCGAACATACCGAGGATGCAAAAGAGTTCACTAGTTTTCGATTGATTCAAGCAAAACTGAGGCTGTTTTTCCCC

mRNA sequence

CTTTAGCAATGGCGATACTGTAAATTGGCGCAGTCAATTGGAATCTGAAACTTTCGGAAATTTCTGGGTTTAGCTAAAACAACCACTTCCGAAACGATGATTCTAATGGAATTTCTAATCCAAATTCCAAAGCCCCCTTTTCACCTTCTGGTAAACTGTGGAATTTTGTTGTGATGGTAATGGTAGCCCACACCTTCAATCTCTCTCTCTCTCTTCTGTCGCTGTTCTCTCTCTCTATATTACGAGTTTGGTAGCTGCTTAAGTTTTTGATAACACCGAAAAACCCTGAAACTTTTCCCTCCAATTCTTCTCCTTCATAATTAAGCTGCCATGAGCTACAAATCCAGCTATGTCGGAGCGGGGAAATTCGTCTGAAACTTTTGGGGATAATATGGGTGAAGAAGGTTATGGATGGTCCCCGACTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTGGAGGCACTTCGACAACTCCGTCGATGCAGTCTCTTTTGGTTTTGTTGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCTATCTTTGAAAGGTTTTTGCGACCTACTCCGACCGCTTTCTCTCACGCCGGCCGTCGGACCCACCTTGACCCTGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGGCCACCCATCACCCAAAATGACTGTGTATTCCTGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCCGTCCCGTGTCCCCCTGAACGCATTCCATGGCCACAACATCAACATAATGACTTATCCTATGCCACAACCAGTTCCCATATCACTGAAAACTCGAGTTCCTTATGAGATCGAACATACCGAGGATGCAAAAGAGTTCACTAGTTTTCGATTGATTCAAGCAAAACTGAGGCTGTTTTTCCCC

Coding sequence (CDS)

ATGTCGGAGCGGGGAAATTCGTCTGAAACTTTTGGGGATAATATGGGTGAAGAAGGTTATGGATGGTCCCCGACTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTGGAGGCACTTCGACAACTCCGTCGATGCAGTCTCTTTTGGTTTTGTTGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCTATCTTTGAAAGGTTTTTGCGACCTACTCCGACCGCTTTCTCTCACGCCGGCCGTCGGACCCACCTTGACCCTGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGGCCACCCATCACCCAAAATGACTGTGTATTCCTGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCCGTCCCGTGTCCCCCTGAACGCATTCCATGGCCACAACATCAACATAATGACTTATCCTATGCCACAACCAGTTCCCATATCACTGAAAACTCGAGTTCCTTATGA

Protein sequence

MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL
Homology
[Close]
BLAST of Carg21483 vs. NCBI nr
Match: KAG6584016.1 (hypothetical protein SDJN03_19948, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019634.1 hypothetical protein SDJN02_18597 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345.5 bits (885), Expect = 2.5e-91
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 

Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 165

[Close]
BLAST of Carg21483 vs. NCBI nr
Match: XP_023001755.1 (uncharacterized protein LOC111495798 [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 4.7e-90
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0 

Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFG NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGHNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSH TENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHFTENSSSL 165

[Close]
BLAST of Carg21483 vs. NCBI nr
Match: XP_022927571.1 (uncharacterized protein LOC111434363 [Cucurbita moschata])

HSP 1 Score: 340.9 bits (873), Expect = 6.2e-90
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0 

Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPV CPPERIPWPQHQHNDLSYATTSSH TENSSSL
Sbjct: 121 HIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL 165

[Close]
BLAST of Carg21483 vs. NCBI nr
Match: XP_023519551.1 (uncharacterized protein LOC111782932 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.0 bits (855), Expect = 7.6e-88
Identity = 159/165 (96.36%), Postives = 161/165 (97.58%), Query Frame = 0 

Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFG NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGHNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSH GRRTHLDPEAQMGFAGKLGH SPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHTGRRTHLDPEAQMGFAGKLGHSSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHND+S+ATTSSH TENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDISHATTSSHFTENSSSL 165

[Close]
BLAST of Carg21483 vs. NCBI nr
Match: XP_022139852.1 (uncharacterized protein LOC111010664 [Momordica charantia])

HSP 1 Score: 304.7 bits (779), Expect = 4.9e-79
Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 0 

Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MS+RGN SETF  +MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSKRGNFSETFRHHMGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FL+MAIFERFLRP PTAFSH   R+HLDPEAQ+ FAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVRFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHN  SYATTSSH+TENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL 165

[Close]
BLAST of Carg21483 vs. ExPASy TrEMBL
Match: A0A6J1KM25 (uncharacterized protein LOC111495798 OS=Cucurbita maxima OX=3661 GN=LOC111495798 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.3e-90
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0 

Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFG NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGHNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSH TENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHFTENSSSL 165

[Close]
BLAST of Carg21483 vs. ExPASy TrEMBL
Match: A0A6J1EI19 (uncharacterized protein LOC111434363 OS=Cucurbita moschata OX=3662 GN=LOC111434363 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 3.0e-90
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0 

Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPV CPPERIPWPQHQHNDLSYATTSSH TENSSSL
Sbjct: 121 HIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL 165

[Close]
BLAST of Carg21483 vs. ExPASy TrEMBL
Match: A0A6J1CF31 (uncharacterized protein LOC111010664 OS=Momordica charantia OX=3673 GN=LOC111010664 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 2.4e-79
Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 0 

Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MS+RGN SETF  +MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSKRGNFSETFRHHMGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FL+MAIFERFLRP PTAFSH   R+HLDPEAQ+ FAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVRFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHN  SYATTSSH+TENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL 165

[Close]
BLAST of Carg21483 vs. ExPASy TrEMBL
Match: A0A0A0LRU5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073000 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.8e-77
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0 

Query: 15  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 74
           MGEEGYGWSP GAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1   MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 75  PTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 134
           PTAFSHAG RTHLDPEAQMGFAGKL HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC
Sbjct: 61  PTAFSHAGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 120

Query: 135 PPERIPWPQHQHNDLSYATTSSHITENSSS 165
            PERIPWPQHQHND+SY T SSH  ENSSS
Sbjct: 121 APERIPWPQHQHNDISYVTNSSHFIENSSS 150

[Close]
BLAST of Carg21483 vs. ExPASy TrEMBL
Match: A0A5D3DRS2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00430 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.0e-77
Identity = 139/150 (92.67%), Postives = 143/150 (95.33%), Query Frame = 0 

Query: 15  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 74
           MGEEGYGWSP GAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1   MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 75  PTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 134
           PTAFSHAG RTHLDPEAQMGF GKL HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC
Sbjct: 61  PTAFSHAGGRTHLDPEAQMGFTGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 120

Query: 135 PPERIPWPQHQHNDLSYATTSSHITENSSS 165
            PERIPWPQHQHND+SY T SSH+TE+SSS
Sbjct: 121 APERIPWPQHQHNDISYVTNSSHLTESSSS 150

[Close]
BLAST of Carg21483 vs. TAIR 10
Match: AT1G11120.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 158.3 bits (399), Expect = 5.3e-39
Identity = 83/146 (56.85%), Postives = 109/146 (74.66%), Query Frame = 0 

Query: 22  WSPTGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH 81
           W P GAP++++RE+ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R T T+ ++
Sbjct: 15  WPPIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTTN 74

Query: 82  ---AGRRTHLDPEAQMGFAG---KLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 141
              +  R     ++++GF G   KLG+ SPKMTVYS GVSVLMPGD IPT+IAHPAPVPC
Sbjct: 75  SDSSSSRVLPGMDSRVGFNGAATKLGYQSPKMTVYSNGVSVLMPGDDIPTFIAHPAPVPC 134

Query: 142 PPERIPWPQHQHNDLSYATTSSHITE 161
           PP+ I   QHQH     +++S+ I E
Sbjct: 135 PPQNISQSQHQHGSSKDSSSSNSIQE 160

[Close]
BLAST of Carg21483 vs. TAIR 10
Match: AT1G11120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 270 Blast hits to 255 proteins in 62 species: Archae - 0; Bacteria - 2; Metazoa - 93; Fungi - 14; Plants - 126; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-34
Identity = 83/172 (48.26%), Postives = 109/172 (63.37%), Query Frame = 0 

Query: 22  WSPTGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSH 81
           W P GAP++++RE+ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R T T+ ++
Sbjct: 15  WPPIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRTTTTSTTN 74

Query: 82  ---AGRRTHLDPEAQMGFAG---KLGHPSPK--------------------------MTV 141
              +  R     ++++GF G   KLG+ SPK                          MTV
Sbjct: 75  SDSSSSRVLPGMDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILRMTV 134

Query: 142 YSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITE 161
           YS GVSVLMPGD IPT+IAHPAPVPCPP+ I   QHQH     +++S+ I E
Sbjct: 135 YSNGVSVLMPGDDIPTFIAHPAPVPCPPQNISQSQHQHGSSKDSSSSNSIQE 186

[Close]
BLAST of Carg21483 vs. TAIR 10
Match: AT1G09812.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G58007.2); Has 93 Blast hits to 93 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 3.0e-18
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 0 

Query: 27  APLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFS--HAGRR 86
           +P +   E  WR    S++A+SFGFVATAIL+SMFL+MAIFE   RP  ++F   H  R+
Sbjct: 11  SPREGDSEGPWRS-STSMNAISFGFVATAILISMFLIMAIFEHLFRPENSSFDSPHQIRQ 70

Query: 87  THLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWP 143
              D  +Q           P  TV    VSV+MPG+ +P++IA PAP+PC  E I WP
Sbjct: 71  RQRDGSSQFQKLADQASMVPVSTVVD--VSVVMPGEKLPSHIALPAPLPCRREGIHWP 125

[Close]
BLAST of Carg21483 vs. TAIR 10
Match: AT1G58007.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 91 Blast hits to 91 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 7.0e-15
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0 

Query: 42  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGH 101
           +S++A+SFGFVATAIL+ MF++MAI E   R      S       +D  +Q     KL  
Sbjct: 21  SSMNAISFGFVATAILILMFIIMAILEHLFR------SDHSSSYDVDDSSQF---QKLAE 80

Query: 102 PSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQH 145
            +  + V +  VSV+MPGD +P+Y+A PAP PC  E I WP H
Sbjct: 81  KASMVPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWPSH 114

[Close]
BLAST of Carg21483 vs. TAIR 10
Match: AT1G58007.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09812.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 7.0e-15
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0 

Query: 42  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGH 101
           +S++A+SFGFVATAIL+ MF++MAI E   R      S       +D  +Q     KL  
Sbjct: 21  SSMNAISFGFVATAILILMFIIMAILEHLFR------SDHSSSYDVDDSSQF---QKLAE 80

Query: 102 PSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQH 145
            +  + V +  VSV+MPGD +P+Y+A PAP PC  E I WP H
Sbjct: 81  KASMVPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWPSH 114

The following BLAST results are available for this feature:
BLAST of Carg21483 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6584016.12.5e-91100.00hypothetical protein SDJN03_19948, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023001755.14.7e-9098.79uncharacterized protein LOC111495798 [Cucurbita maxima][more]
XP_022927571.16.2e-9098.79uncharacterized protein LOC111434363 [Cucurbita moschata][more]
XP_023519551.17.6e-8896.36uncharacterized protein LOC111782932 [Cucurbita pepo subsp. pepo][more]
XP_022139852.14.9e-7987.88uncharacterized protein LOC111010664 [Momordica charantia][more]
BLAST of Carg21483 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg21483 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KM252.3e-9098.79uncharacterized protein LOC111495798 OS=Cucurbita maxima OX=3661 GN=LOC111495798... [more]
A0A6J1EI193.0e-9098.79uncharacterized protein LOC111434363 OS=Cucurbita moschata OX=3662 GN=LOC1114343... [more]
A0A6J1CF312.4e-7987.88uncharacterized protein LOC111010664 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A0A0LRU53.8e-7793.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073000 PE=4 SV=1[more]
A0A5D3DRS25.0e-7792.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Carg21483 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G11120.25.3e-3956.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G11120.11.0e-3448.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G09812.13.0e-1844.92unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G58007.17.0e-1543.69unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G58007.27.0e-1543.69unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR33728:SF13CTTNBP 2 AMINO-TERMINAL-LIKE PROTEINcoord: 15..154
NoneNo IPR availablePANTHERPTHR33728CTTNBP 2 AMINO-TERMINAL-LIKE PROTEINcoord: 15..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21483-RACarg21483-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane