Carg21482 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21482
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Pinin-like
Location	Carg_Chr13: 7395068 .. 7395907 (-)
RNA-Seq Expression	Carg21482
Synteny	Carg21482

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGCTGTGTCAGTAGTTCCAGGACTTCTAATTCATCCTCTCCGCCCCACCATTCTGGATCTGCATTTTCCCATTCCAAATCCGATCACATTGGAAACAGAGCACCCCCTCCACTGGAAGAAGAGTCTGTCAAAGAGGTTCTCTCTGAAACTCCTAAACCTAAGCCGCCACCGATTGGGGGGAGAAAACTCCACGAATCTGCCTCTGGGAACCTCAATGGGGGAATCCCCATTCATTCCACTGAAGAAATTTCTGAGATTTCTGACGTTTGCAGCTTTAACGAATCCCTGTCTACTACGACTGTAACAGAGAAGCTGGATGATTTCGAAGAGATACGTAAAAGGATTTGCAGATCTCCGGCGAAATTGCCCAAGAATCGGTCGTCTCTCTCGGATGATTGGGTTCAGAGGAGGGATAGAATTGTGGGTAAATCGCCAACAAGAAAACCCGATCAGTCGCCCGGCCGGATTAACAGCGGCGCTGGAACTGTGAAGTTGGTGCAGAGCAGAGACATGGGGCAGGGACTCCTCGCAAGTCGAAGTTTGAGGCCAGAGCAACGCGTTCAGAACAGAACTGAGAATTCATATCGAAGGTCCAGATCCCCTGCCACCACTCGAACCGACGGCGAAGCCTCCAGAACCGCCGCTGGCCGGAGTCCATCTGTCCGGCGGTCTGGAATGTCGCCGGGAAGAGAAGCAACCACCGGAGGAGACTATTACCGGAAAGAAACAGGGGAGGTTCATGCACAGAACGAGACGATAGAGGGAAAATGGCGGACAACAAACGAATCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTTCTCTGA

mRNA sequence

ATGGGTTGCTGTGTCAGTAGTTCCAGGACTTCTAATTCATCCTCTCCGCCCCACCATTCTGGATCTGCATTTTCCCATTCCAAATCCGATCACATTGGAAACAGAGCACCCCCTCCACTGGAAGAAGAGTCTGTCAAAGAGGTTCTCTCTGAAACTCCTAAACCTAAGCCGCCACCGATTGGGGGGAGAAAACTCCACGAATCTGCCTCTGGGAACCTCAATGGGGGAATCCCCATTCATTCCACTGAAGAAATTTCTGAGATTTCTGACGTTTGCAGCTTTAACGAATCCCTGTCTACTACGACTGTAACAGAGAAGCTGGATGATTTCGAAGAGATACGTAAAAGGATTTGCAGATCTCCGGCGAAATTGCCCAAGAATCGGTCGTCTCTCTCGGATGATTGGGTTCAGAGGAGGGATAGAATTGTGGGTAAATCGCCAACAAGAAAACCCGATCAGTCGCCCGGCCGGATTAACAGCGGCGCTGGAACTGTGAAGTTGGTGCAGAGCAGAGACATGGGGCAGGGACTCCTCGCAAGTCGAAGTTTGAGGCCAGAGCAACGCGTTCAGAACAGAACTGAGAATTCATATCGAAGGTCCAGATCCCCTGCCACCACTCGAACCGACGGCGAAGCCTCCAGAACCGCCGCTGGCCGGAGTCCATCTGTCCGGCGGTCTGGAATGTCGCCGGGAAGAGAAGCAACCACCGGAGGAGACTATTACCGGAAAGAAACAGGGGAGGTTCATGCACAGAACGAGACGATAGAGGGAAAATGGCGGACAACAAACGAATCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTTCTCTGA

Coding sequence (CDS)

ATGGGTTGCTGTGTCAGTAGTTCCAGGACTTCTAATTCATCCTCTCCGCCCCACCATTCTGGATCTGCATTTTCCCATTCCAAATCCGATCACATTGGAAACAGAGCACCCCCTCCACTGGAAGAAGAGTCTGTCAAAGAGGTTCTCTCTGAAACTCCTAAACCTAAGCCGCCACCGATTGGGGGGAGAAAACTCCACGAATCTGCCTCTGGGAACCTCAATGGGGGAATCCCCATTCATTCCACTGAAGAAATTTCTGAGATTTCTGACGTTTGCAGCTTTAACGAATCCCTGTCTACTACGACTGTAACAGAGAAGCTGGATGATTTCGAAGAGATACGTAAAAGGATTTGCAGATCTCCGGCGAAATTGCCCAAGAATCGGTCGTCTCTCTCGGATGATTGGGTTCAGAGGAGGGATAGAATTGTGGGTAAATCGCCAACAAGAAAACCCGATCAGTCGCCCGGCCGGATTAACAGCGGCGCTGGAACTGTGAAGTTGGTGCAGAGCAGAGACATGGGGCAGGGACTCCTCGCAAGTCGAAGTTTGAGGCCAGAGCAACGCGTTCAGAACAGAACTGAGAATTCATATCGAAGGTCCAGATCCCCTGCCACCACTCGAACCGACGGCGAAGCCTCCAGAACCGCCGCTGGCCGGAGTCCATCTGTCCGGCGGTCTGGAATGTCGCCGGGAAGAGAAGCAACCACCGGAGGAGACTATTACCGGAAAGAAACAGGGGAGGTTCATGCACAGAACGAGACGATAGAGGGAAAATGGCGGACAACAAACGAATCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTTCTCTGA

Protein sequence

MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPIGGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRSPAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLASRSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDYYRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL

Homology

[Close]

BLAST of Carg21482 vs. NCBI nr
Match: KAG7019635.1 (hypothetical protein SDJN02_18598, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 537.7 bits (1384), Expect = 5.8e-149
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI
Sbjct: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS
Sbjct: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS
Sbjct: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY
Sbjct: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240

Query: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of Carg21482 vs. NCBI nr
Match: XP_022927125.1 (uncharacterized protein LOC111434064 [Cucurbita moschata])

HSP 1 Score: 533.9 bits (1374), Expect = 8.4e-148
Identity = 276/279 (98.92%), Postives = 278/279 (99.64%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVS+SRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI
Sbjct: 1   MGCCVSTSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS
Sbjct: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPKNRSSLSDDWVQRRDR+VGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS
Sbjct: 121 PAKLPKNRSSLSDDWVQRRDRMVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRT AGRSPSVRRSGMSPGREATTGGDY
Sbjct: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTTAGRSPSVRRSGMSPGREATTGGDY 240

Query: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of Carg21482 vs. NCBI nr
Match: XP_023001643.1 (uncharacterized protein LOC111495715 [Cucurbita maxima])

HSP 1 Score: 531.2 bits (1367), Expect = 5.5e-147
Identity = 275/279 (98.57%), Postives = 278/279 (99.64%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVS+SRTSNSSSPPHHSGSAFSHSKS+HIGNRAPPPLEEESVKEVLSETPKPKPPPI
Sbjct: 1   MGCCVSTSRTSNSSSPPHHSGSAFSHSKSNHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS
Sbjct: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPKNRSSLSDDWVQRRDR+VGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS
Sbjct: 121 PAKLPKNRSSLSDDWVQRRDRMVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPE RVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY
Sbjct: 181 RSLRPEPRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240

Query: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of Carg21482 vs. NCBI nr
Match: KAG6584017.1 (hypothetical protein SDJN03_19949, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 531.2 bits (1367), Expect = 5.5e-147
Identity = 277/279 (99.28%), Postives = 278/279 (99.64%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVS+SRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI
Sbjct: 1   MGCCVSTSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS
Sbjct: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS
Sbjct: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY
Sbjct: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240

Query: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           YRKETGEVHAQNETIEGK RTTNESLDNPLVSLECFIFL
Sbjct: 241 YRKETGEVHAQNETIEGKRRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of Carg21482 vs. NCBI nr
Match: XP_023520218.1 (uncharacterized protein LOC111783521 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144
Identity = 271/279 (97.13%), Postives = 275/279 (98.57%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVS+SRTSNSSSPP HSGSAFSHSKS+HIGNRAPPPLEEESVKEVLSETPKPKPPPI
Sbjct: 1   MGCCVSTSRTSNSSSPPRHSGSAFSHSKSNHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS
Sbjct: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPKNRSSLSDDWVQRRDR+VGKSPTRKPDQSPGRINSGAGTVKLVQ+RDMGQGLLAS
Sbjct: 121 PAKLPKNRSSLSDDWVQRRDRMVGKSPTRKPDQSPGRINSGAGTVKLVQNRDMGQGLLAS 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRT AGR PSVRRSGMSPGREA TGGDY
Sbjct: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTTAGRIPSVRRSGMSPGREAATGGDY 240

Query: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of Carg21482 vs. ExPASy TrEMBL
Match: A0A6J1EN02 (uncharacterized protein LOC111434064 OS=Cucurbita moschata OX=3662 GN=LOC111434064 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.1e-148
Identity = 276/279 (98.92%), Postives = 278/279 (99.64%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVS+SRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI
Sbjct: 1   MGCCVSTSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS
Sbjct: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPKNRSSLSDDWVQRRDR+VGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS
Sbjct: 121 PAKLPKNRSSLSDDWVQRRDRMVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRT AGRSPSVRRSGMSPGREATTGGDY
Sbjct: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTTAGRSPSVRRSGMSPGREATTGGDY 240

Query: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of Carg21482 vs. ExPASy TrEMBL
Match: A0A6J1KR40 (uncharacterized protein LOC111495715 OS=Cucurbita maxima OX=3661 GN=LOC111495715 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.6e-147
Identity = 275/279 (98.57%), Postives = 278/279 (99.64%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVS+SRTSNSSSPPHHSGSAFSHSKS+HIGNRAPPPLEEESVKEVLSETPKPKPPPI
Sbjct: 1   MGCCVSTSRTSNSSSPPHHSGSAFSHSKSNHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS
Sbjct: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPKNRSSLSDDWVQRRDR+VGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS
Sbjct: 121 PAKLPKNRSSLSDDWVQRRDRMVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPE RVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY
Sbjct: 181 RSLRPEPRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240

Query: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 YRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of Carg21482 vs. ExPASy TrEMBL
Match: A0A6J1JZ58 (uncharacterized protein LOC111490165 OS=Cucurbita maxima OX=3661 GN=LOC111490165 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 6.6e-106
Identity = 223/280 (79.64%), Postives = 238/280 (85.00%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVSSSR+SNSSSPPHHSGS  S+ K   IGNRAPPPLEEESVKEVLSETPKPK    
Sbjct: 1   MGCCVSSSRSSNSSSPPHHSGSGCSYPKPTAIGNRAPPPLEEESVKEVLSETPKPK-SSF 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           G RK  ES SG +NGGIPIH TEEISE+SDVCSF+E+LSTTTVTEK+DD+EEIR+RI RS
Sbjct: 61  GERKTGESFSGRINGGIPIHPTEEISEVSDVCSFSETLSTTTVTEKVDDYEEIRQRISRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPK+R + SDDWV  RDR VGKSPTRK +QSPGRIN   GTVKLVQSRDM QG L+ 
Sbjct: 121 PAKLPKSRPN-SDDWVLGRDRQVGKSPTRKSNQSPGRIN--GGTVKLVQSRDMVQG-LSR 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPE R+ N TENSYRRSRSPATTR D  ASRTAAGRSPSVRRSGMSPGREAT G DY
Sbjct: 181 RSLRPEPRLHNSTENSYRRSRSPATTRIDSVASRTAAGRSPSVRRSGMSPGREATGGRDY 240

Query: 241 YRKETGEVH-AQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           YRKETG+    QNETIEGKW TTNESLDNPLVSLECFIFL
Sbjct: 241 YRKETGQAQPPQNETIEGKWPTTNESLDNPLVSLECFIFL 275

[Close]

BLAST of Carg21482 vs. ExPASy TrEMBL
Match: A0A6J1GRS3 (uncharacterized protein LOC111456914 OS=Cucurbita moschata OX=3662 GN=LOC111456914 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.6e-104
Identity = 222/280 (79.29%), Postives = 236/280 (84.29%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPKPPPI 60
           MGCCVSSSR+SNSSSPPHHSGS  S+ K   IGNRAPPPLEEESVKEVLSETPKPK    
Sbjct: 1   MGCCVSSSRSSNSSSPPHHSGSGCSYPKPTAIGNRAPPPLEEESVKEVLSETPKPK-SSF 60

Query: 61  GGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKRICRS 120
           G RK  ES SG +NGGIPIH TEEISE+SDVCSF+E+LSTTTVTEK+DD+EEIR+RI RS
Sbjct: 61  GERKTGESFSGRINGGIPIHPTEEISEVSDVCSFSETLSTTTVTEKVDDYEEIRQRISRS 120

Query: 121 PAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQGLLAS 180
           PAKLPK+R + SDDWV  RDR VGKSPTRK +QSPGRIN   GTVKLVQSRDM QG L+ 
Sbjct: 121 PAKLPKSRPN-SDDWVLGRDRQVGKSPTRKSNQSPGRIN--GGTVKLVQSRDMAQG-LSR 180

Query: 181 RSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATTGGDY 240
           RSLRPE R+ N TENSYRRSRSPATTR D  ASRTAAGRSPSVRRSGMSPGREAT G DY
Sbjct: 181 RSLRPEPRLHNSTENSYRRSRSPATTRIDSVASRTAAGRSPSVRRSGMSPGREATGGRDY 240

Query: 241 YRKETGEVH-AQNETIEGKWRTTNESLDNPLVSLECFIFL 280
            RKETG    AQNE IEGKW TTNESLDNPLVSLECFIFL
Sbjct: 241 SRKETGLAQPAQNEMIEGKWPTTNESLDNPLVSLECFIFL 275

[Close]

BLAST of Carg21482 vs. ExPASy TrEMBL
Match: A0A5D3DT19 (Pinin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00420 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 5.8e-102
Identity = 216/284 (76.06%), Postives = 234/284 (82.39%), Query Frame = 0


Query: 1   MGCCVS----SSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSETPKPK 60
           MGCCVS    SS +S+SSSPPHHS SA+SH K + I NRAPPPLEEESVKEVLSETPKPK
Sbjct: 1   MGCCVSTSKHSSSSSSSSSPPHHSRSAYSHPKLNRIANRAPPPLEEESVKEVLSETPKPK 60

Query: 61  PPPIGGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNESLSTTTVTEKLDDFEEIRKR 120
                     ESAS  +NG IPIH TEEISE+SDVCSF+E+LSTTTVTEKLDDFEEIR+R
Sbjct: 61  TLL---SNHDESASRKVNGRIPIHPTEEISEVSDVCSFSETLSTTTVTEKLDDFEEIRQR 120

Query: 121 ICRSPAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQSRDMGQG 180
           ICRSPAKLP+NRS  SDDW  +RDR+VGKSPTRK DQSPGRI  G GTVKLVQSRDMGQG
Sbjct: 121 ICRSPAKLPQNRSP-SDDWAPKRDRMVGKSPTRKSDQSPGRIYGGGGTVKLVQSRDMGQG 180

Query: 181 LLASRSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAAGRSPSVRRSGMSPGREATT 240
            L  RS R E R+QNRTEN+YRRSRSPA TRTDG  SRT AGRSPSVRRSGMSPGRE+T 
Sbjct: 181 -LTRRSPRSEPRLQNRTENAYRRSRSPAYTRTDGGGSRTGAGRSPSVRRSGMSPGRESTP 240

Query: 241 GGDYYRKETGE-VHAQNETIEGKWRTTNESLDNPLVSLECFIFL 280
           G +YYRKE G+    +N TIEGKWRTTNESLDNPLVSLECFIFL
Sbjct: 241 GREYYRKEPGQSQETRNSTIEGKWRTTNESLDNPLVSLECFIFL 279

[Close]

BLAST of Carg21482 vs. TAIR 10
Match: AT1G61170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-09
Identity = 89/302 (29.47%), Postives = 132/302 (43.71%), Query Frame = 0


Query: 3   CCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEES-VKEVLSETPKPKP---- 62
           CCVSS  T                 +++++ ++    +EEE+ VKEVLSET    P    
Sbjct: 4   CCVSSGTTDR---------------ENENVSDKNTTIVEEETVVKEVLSETTLFTPSSSF 63

Query: 63  ------PPIGG--RKLHESASGNLN-GGIPI------HSTEEISEISDVC--SFNESLST 122
                  P+    R+  E   G L     P+         EE SE+S++C  S +ES+S+
Sbjct: 64  RTSTFKDPVKTKIREDEEKKPGFLKMASDPVLIRPGSVDPEEGSEVSEICSLSLSESVSS 123

Query: 123 TTVTEKLDDFEEIRK--RICRSPAKLPKNRSSLSDDWVQRRDRIVGKS-PTRKPDQSPGR 182
           T V    D+   + K  +  RSPAK               R ++ G + PTR+ DQSP +
Sbjct: 124 TVVMNGYDEEHVMMKQRKSQRSPAK--------------TRTQVTGNNYPTRRTDQSPRK 183

Query: 183 INSGAGTVKLVQSRDMGQGLLASRSLRPEQRVQNRTENSYRRSRSPATTRTDGEASRTAA 242
            N+G                      R    V++  E S RRSRSPAT R+  ++++++ 
Sbjct: 184 RNNG-----------------TCNGARYGSGVRDPGERSGRRSRSPATNRSVMDSNQSSR 243

Query: 243 GRSPSVRRSGMSPGREATTGGDYYRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECFI 280
                 R++  SPGR         R +  +     +  +    TT E L+NPLVSLECFI
Sbjct: 244 VGGAKTRKNNQSPGR--------VRLDPAKNGLDQQQHQNYGYTTEELLENPLVSLECFI 251

[Close]

BLAST of Carg21482 vs. TAIR 10
Match: AT1G11125.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61170.1). )

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-08
Identity = 86/309 (27.83%), Postives = 128/309 (41.42%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEES-VKEVLSET------- 60
           MGCC+SS+       P     +A           R P  ++EE+ VKEVLSET       
Sbjct: 1   MGCCLSSATADKKDDPVSGKNTA-----------RPPSVIDEETVVKEVLSETTLLTSSN 60

Query: 61  ---------------PKPKPPPIGGRKLHESASGNLNGGIPIHSTEEISEISDVCSFNES 120
                           + K P I    + + A   +     +   E+ SE+S+ CS +ES
Sbjct: 61  DNSTVEKTTLTKIQEEEEKKPGI----VVDVAQEPVLTKPSLVEPEKGSEVSENCSLSES 120

Query: 121 LSTTTVTEKLDDFEEIRKRIC--RSPAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSP 180
           L +       ++ ++++  +   RSPAK               R+R++   P R+ D SP
Sbjct: 121 LLSIVNKYDEEEVKQMKSHVVRQRSPAK--------------SRNRVMVSYPNRRTDMSP 180

Query: 181 GRINS--GAGTVKLVQSRDMGQGLLASRSLRPEQRVQNRTENSYRRSRSPATTRT---DG 240
            + N+   AG+V+LV S                   ++ TE S RRSRSPA  R+     
Sbjct: 181 RKRNNEEEAGSVRLVPS---------------ATGTRDSTERSERRSRSPAMNRSVMMGP 240

Query: 241 EASRTAAGRSPSVRRSGMSPGREATTGGDYYRKETGEVHAQNETIEGKWRTTNESLDNPL 280
             S+ +     ++RR   SPGR           +    H    +I       N+S +NPL
Sbjct: 241 TRSQQSTDSCGAMRRQSQSPGRVRLNPNMNGSDQECNHHKWPGSIGNYNSAPNDSFENPL 265

[Close]

BLAST of Carg21482 vs. TAIR 10
Match: AT4G28180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; Has 1508 Blast hits to 1315 proteins in 223 species: Archae - 4; Bacteria - 127; Metazoa - 687; Fungi - 310; Plants - 142; Viruses - 28; Other Eukaryotes - 210 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 2.5e-04
Identity = 81/303 (26.73%), Postives = 121/303 (39.93%), Query Frame = 0


Query: 1   MGCCVSSSRTSNSSSPPHHSGSAFSHSKSDHIGNRAPPPLEEESVKEVLSET-----PKP 60
           MGCC S+ +    ++PP  +              + PPPLEEESVKEV+ ++     P P
Sbjct: 1   MGCCFSAGKV---TAPPVAAA-------------QIPPPLEEESVKEVVVQSVSVSVPIP 60

Query: 61  KPPPIGGRKLHESAS--GNLNGGIPIHSTEEISEI----SDVCSFNESLSTTTVTEKLDD 120
              P+    L  SA    +    +P+  +    EI    SD+CS + S S +T T     
Sbjct: 61  ISVPVPVPDLVPSAPTVSDSEAQVPLPLSPPAPEISHSKSDICSVSVSHSYSTAT----- 120

Query: 121 FEEIRKRICRSPAKLPKNRSSLSDDWVQRRDRIVGKSPTRKPDQSPGRINSGAGTVKLVQ 180
                              S L DD + +  R    S +      P R+          Q
Sbjct: 121 --------------TATAASILEDDALSKPHRPPPPSSSTSRRNRPDRVLRSPAERHSPQ 180

Query: 181 SRDMGQGLLASRSLRPEQRVQNR-------------TENSYRRSRSPATTRTDGEASRTA 240
            + +   L+  R  R      NR             ++N  RRS+SPAT       + ++
Sbjct: 181 GKQLRPRLVRERQSRQPNPTHNRRNVDSGPLPRSGLSDNPRRRSQSPAT------RAPSS 240

Query: 241 AGRSPSVRRSGMSPGREATTGGDYYRKETGEVHAQNETIEGKWRTTNESLDNPLVSLECF 280
           A RSP  +R G +P ++  T      +ET +V     T E K      ++ +P VS+ECF
Sbjct: 241 ARRSPMKKRVG-APEKDGATEVKKKEEETEKV-----TAEVKKEEDVTAVRDPEVSMECF 256

The following BLAST results are available for this feature:

BLAST of Carg21482 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019635.1	5.8e-149	100.00	hypothetical protein SDJN02_18598, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022927125.1	8.4e-148	98.92	uncharacterized protein LOC111434064 [Cucurbita moschata]	[more]
XP_023001643.1	5.5e-147	98.57	uncharacterized protein LOC111495715 [Cucurbita maxima]	[more]
KAG6584017.1	5.5e-147	99.28	hypothetical protein SDJN03_19949, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023520218.1	1.1e-144	97.13	uncharacterized protein LOC111783521 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg21482 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21482 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EN02	4.1e-148	98.92	uncharacterized protein LOC111434064 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A6J1KR40	2.6e-147	98.57	uncharacterized protein LOC111495715 OS=Cucurbita maxima OX=3661 GN=LOC111495715...	[more]
A0A6J1JZ58	6.6e-106	79.64	uncharacterized protein LOC111490165 OS=Cucurbita maxima OX=3661 GN=LOC111490165...	[more]
A0A6J1GRS3	1.6e-104	79.29	uncharacterized protein LOC111456914 OS=Cucurbita moschata OX=3662 GN=LOC1114569...	[more]
A0A5D3DT19	5.8e-102	76.06	Pinin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00420 PE=...	[more]

BLAST of Carg21482 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61170.1	2.5e-09	29.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G11125.1	4.8e-08	27.83	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G28180.1	2.5e-04	26.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..147
None	No IPR available	PANTHER	PTHR33871	OS05G0503100 PROTEIN-RELATED	coord: 1..279
None	No IPR available	PANTHER	PTHR33871:SF1	OS05G0503100 PROTEIN	coord: 1..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21482-RA	Carg21482-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane