Carg21466 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21466
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYB102-like
Location	Carg_Chr13: 7478678 .. 7479223 (+)
RNA-Seq Expression	Carg21466
Synteny	Carg21466

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTTTCAAGCTTGCTTGGAGTGCAGCCATTAGTAAACCCTGAGCTTCTTAAATTGGCTGCTTCATTAATGTCTTCTGAACGTAAAAGTCAAAGCTTTTCGCCGCAAAATCGTATGCAGACTATTCAATTCTCTCATCCTCAGCTAGAAATGCAAGTTCCTGTACAAGAAATTGTTCAATTCCCTCAATTGGTGGAGCCAATTGCAAGCGAATTAAATGATCAATGGCAAATAAGCGAAGGCTGCAATAATATTGAGATTCCGACAGGGTTTGACTATTGTGGGTTTGATCAGCAACACGCCGCCGCAGTGATGGACAATTCGTATGAAATGCCGACGTTTAGTTCCCACAAAGACATGGGTAATAACAAGAACAACTTCAATTTGAGCTCGGTTTTATCTTCGCCATGTTCTTCAAGCCCTACGCAGATGAATTCCAACTCCACATATTTTACTAGTCCAAATGAGGATGAGAGAGAAAGTTACTGTAGCCAGATTTTGAATTTTGATGTCCCTGATTTCTTTGATGAAAGTTTCATGTAA

mRNA sequence

ATGAACCTTTCAAGCTTGCTTGGAGTGCAGCCATTAGTAAACCCTGAGCTTCTTAAATTGGCTGCTTCATTAATGTCTTCTGAACGTAAAAGTCAAAGCTTTTCGCCGCAAAATCGTATGCAGACTATTCAATTCTCTCATCCTCAGCTAGAAATGCAAGTTCCTGTACAAGAAATTGTTCAATTCCCTCAATTGGTGGAGCCAATTGCAAGCGAATTAAATGATCAATGGCAAATAAGCGAAGGCTGCAATAATATTGAGATTCCGACAGGGTTTGACTATTGTGGGTTTGATCAGCAACACGCCGCCGCAGTGATGGACAATTCGTATGAAATGCCGACGTTTAGTTCCCACAAAGACATGGGTAATAACAAGAACAACTTCAATTTGAGCTCGGTTTTATCTTCGCCATGTTCTTCAAGCCCTACGCAGATGAATTCCAACTCCACATATTTTACTAGTCCAAATGAGGATGAGAGAGAAAGTTACTGTAGCCAGATTTTGAATTTTGATGTCCCTGATTTCTTTGATGAAAGTTTCATGTAA

Coding sequence (CDS)

ATGAACCTTTCAAGCTTGCTTGGAGTGCAGCCATTAGTAAACCCTGAGCTTCTTAAATTGGCTGCTTCATTAATGTCTTCTGAACGTAAAAGTCAAAGCTTTTCGCCGCAAAATCGTATGCAGACTATTCAATTCTCTCATCCTCAGCTAGAAATGCAAGTTCCTGTACAAGAAATTGTTCAATTCCCTCAATTGGTGGAGCCAATTGCAAGCGAATTAAATGATCAATGGCAAATAAGCGAAGGCTGCAATAATATTGAGATTCCGACAGGGTTTGACTATTGTGGGTTTGATCAGCAACACGCCGCCGCAGTGATGGACAATTCGTATGAAATGCCGACGTTTAGTTCCCACAAAGACATGGGTAATAACAAGAACAACTTCAATTTGAGCTCGGTTTTATCTTCGCCATGTTCTTCAAGCCCTACGCAGATGAATTCCAACTCCACATATTTTACTAGTCCAAATGAGGATGAGAGAGAAAGTTACTGTAGCCAGATTTTGAATTTTGATGTCCCTGATTTCTTTGATGAAAGTTTCATGTAA

Protein sequence

MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESFM

Homology

[Close]

BLAST of Carg21466 vs. NCBI nr
Match: KAG7019650.1 (hypothetical protein SDJN02_18613, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV
Sbjct: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60

Query: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120
           QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD
Sbjct: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120

Query: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180
           MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF
Sbjct: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180

Query: 181 M 182
           M
Sbjct: 181 M 181

[Close]

BLAST of Carg21466 vs. NCBI nr
Match: KAG6584037.1 (Transcription factor MYB102, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355.9 bits (912), Expect = 2.0e-94
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV
Sbjct: 158 MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 217

Query: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120
           QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD
Sbjct: 218 QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 277

Query: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180
           MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF
Sbjct: 278 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 337

Query: 181 M 182
           M
Sbjct: 338 M 338

[Close]

BLAST of Carg21466 vs. NCBI nr
Match: XP_023519871.1 (transcription factor MYB102-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIV
Sbjct: 149 MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNGMQTIQFSHPQLEMQVPVQEIV 208

Query: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120
           QFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD
Sbjct: 209 QFPQLVEPIASELNDQWQISEECNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 268

Query: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180
           MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESF
Sbjct: 269 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDIPDFFDESF 328

Query: 181 M 182
           M
Sbjct: 329 M 329

[Close]

BLAST of Carg21466 vs. NCBI nr
Match: AXF54217.1 (MYB15 [Cucurbita pepo])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIV
Sbjct: 31  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNGMQTIQFSHPQLEMQVPVQEIV 90

Query: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120
           QFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD
Sbjct: 91  QFPQLVEPIASELNDQWQISEECNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 150

Query: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180
           MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESF
Sbjct: 151 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDIPDFFDESF 210

Query: 181 M 182
           M
Sbjct: 211 M 211

[Close]

BLAST of Carg21466 vs. NCBI nr
Match: XP_022927584.1 (transcription factor MYB102-like [Cucurbita moschata])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIV
Sbjct: 149 MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNCMQTIQFSHPQLEMQVPVQEIV 208

Query: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120
           QFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD
Sbjct: 209 QFPQLVEPIASELNDQWQISEDCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 268

Query: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180
           MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESF
Sbjct: 269 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDIPDFFDESF 328

Query: 181 M 182
           M
Sbjct: 329 M 329

[Close]

BLAST of Carg21466 vs. ExPASy Swiss-Prot
Match: Q9LDR8 (Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 55/181 (30.39%), Postives = 89/181 (49.17%), Query Frame = 0


Query: 11  PLVNPELLKLAASLMS-SERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPI 70
           PLVNPE+LKLA SL S ++ ++      +R Q  Q  + Q  +            + + +
Sbjct: 169 PLVNPEILKLATSLFSQNQNQNLVVDHDSRTQEKQTVYSQTGVNQYQTNQYFENTITQEL 228

Query: 71  ASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYE---MPTFSSHK------D 130
            S +      +   NN++      + GF +Q+  +    S +    P+F+ +       D
Sbjct: 229 QSSMPPFPNEARQFNNMD----HHFNGFGEQNLVSTSTTSVQDCYNPSFNDYSSSNFVLD 288

Query: 131 MGNNKNNFNL-SSVLSSPCSSSPTQMNSNSTYFTSPN---EDERESYCSQILNFDVPDFF 178
              +  +FN  +SVL++P SSSP+    NS+Y  S +   EDE ESYCS ++ FD+PDF 
Sbjct: 289 PSYSDQSFNFANSVLNTP-SSSPSPTTLNSSYINSSSCSTEDEIESYCSNLMKFDIPDFL 344

[Close]

BLAST of Carg21466 vs. ExPASy TrEMBL
Match: A0A6J1EIE8 (transcription factor MYB102-like OS=Cucurbita moschata OX=3662 GN=LOC111434371 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.1e-93
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIV
Sbjct: 149 MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNCMQTIQFSHPQLEMQVPVQEIV 208

Query: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120
           QFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD
Sbjct: 209 QFPQLVEPIASELNDQWQISEDCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 268

Query: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180
           MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESF
Sbjct: 269 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDIPDFFDESF 328

Query: 181 M 182
           M
Sbjct: 329 M 329

[Close]

BLAST of Carg21466 vs. ExPASy TrEMBL
Match: A0A345BTG0 (MYB15 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.1e-93
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIV
Sbjct: 31  MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNGMQTIQFSHPQLEMQVPVQEIV 90

Query: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120
           QFPQLVEPIASELNDQWQISE CNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD
Sbjct: 91  QFPQLVEPIASELNDQWQISEECNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 150

Query: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180
           MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESF
Sbjct: 151 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDIPDFFDESF 210

Query: 181 M 182
           M
Sbjct: 211 M 211

[Close]

BLAST of Carg21466 vs. ExPASy TrEMBL
Match: A0A6J1KNL9 (transcription factor MYB102-like OS=Cucurbita maxima OX=3661 GN=LOC111495134 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.1e-91
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQN MQTIQFSHPQLEMQVPVQEIV
Sbjct: 149 MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNCMQTIQFSHPQLEMQVPVQEIV 208

Query: 61  QFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 120
           QFPQLVEPIASELNDQWQISE CNNI+IPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD
Sbjct: 209 QFPQLVEPIASELNDQWQISEDCNNIKIPTGFDYCGFDQQHAAAVMDNSYEMPTFSSHKD 268

Query: 121 MGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDVPDFFDESF 180
           MG+NKNNF+LSSV+SSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD+PDFFDESF
Sbjct: 269 MGDNKNNFSLSSVISSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFDIPDFFDESF 328

Query: 181 M 182
           M
Sbjct: 329 M 329

[Close]

BLAST of Carg21466 vs. ExPASy TrEMBL
Match: A0A5A7UQN0 (Protein ODORANT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00260 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.2e-57
Identity = 135/190 (71.05%), Postives = 149/190 (78.42%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQ----TIQFSHPQLEMQVPV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERKS SFSPQN       TIQFS+PQL+MQVP+
Sbjct: 149 MNLSSLLGVQPLVNPELLKLAASLMSSERKSPSFSPQNSSHTTTATIQFSNPQLQMQVPM 208

Query: 61  QEIVQFP-QLVEP-IASELNDQWQISEGCNNIEIPTG-FDYCGFDQQHAAAV--MDNSYE 120
           QEIVQFP Q+VEP I SELND    +   NN ++  G F+YCG DQQ  A    +DNSYE
Sbjct: 209 QEIVQFPSQVVEPNITSELNDDQWGNGQLNNFDLAAGSFEYCGLDQQQQAGAVGVDNSYE 268

Query: 121 MPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD 180
            PTFS H    +N NNF+L SVLSSPCSSSPTQMNSNSTYFTSP EDERESYCSQILNF+
Sbjct: 269 TPTFSFHNG-NSNGNNFSLGSVLSSPCSSSPTQMNSNSTYFTSPTEDERESYCSQILNFE 328

Query: 181 VPDFFDESFM 182
           + D FDE F+
Sbjct: 329 ISDIFDEPFI 337

[Close]

BLAST of Carg21466 vs. ExPASy TrEMBL
Match: A0A0A0LXA4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071840 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.2e-57
Identity = 135/190 (71.05%), Postives = 150/190 (78.95%), Query Frame = 0


Query: 1   MNLSSLLGVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQ----TIQFSHPQLEMQVPV 60
           MNLSSLLGVQPLVNPELLKLAASLMSSERK+ SFSPQN       TIQFS+PQL+MQVP+
Sbjct: 124 MNLSSLLGVQPLVNPELLKLAASLMSSERKNPSFSPQNSSHTTTATIQFSNPQLQMQVPM 183

Query: 61  QEIVQFP-QLVEP-IASELNDQWQISEGCNNIEIPTG-FDYCGFDQQH--AAAVMDNSYE 120
           QEIVQFP Q+VEP IASELND    +   NN ++ TG F+YCG DQQ    A  +DNSYE
Sbjct: 184 QEIVQFPSQVVEPNIASELNDDQWGNGQLNNFDLATGSFEYCGLDQQQQAGAIAVDNSYE 243

Query: 121 MPTFSSHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYFTSPNEDERESYCSQILNFD 180
             TF+ H   GN  NNF+L SVLSSPCSSSPTQMNSNSTYFTSP EDERESYCSQILNF+
Sbjct: 244 TATFNFHNGNGNG-NNFSLGSVLSSPCSSSPTQMNSNSTYFTSPTEDERESYCSQILNFE 303

Query: 181 VPDFFDESFM 182
           + D FDE F+
Sbjct: 304 ISDIFDEPFI 312

[Close]

BLAST of Carg21466 vs. TAIR 10
Match: AT4G21440.1 (MYB-like 102 )

HSP 1 Score: 53.1 bits (126), Expect = 2.6e-07
Identity = 55/181 (30.39%), Postives = 89/181 (49.17%), Query Frame = 0


Query: 11  PLVNPELLKLAASLMS-SERKSQSFSPQNRMQTIQFSHPQLEMQVPVQEIVQFPQLVEPI 70
           PLVNPE+LKLA SL S ++ ++      +R Q  Q  + Q  +            + + +
Sbjct: 169 PLVNPEILKLATSLFSQNQNQNLVVDHDSRTQEKQTVYSQTGVNQYQTNQYFENTITQEL 228

Query: 71  ASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYE---MPTFSSHK------D 130
            S +      +   NN++      + GF +Q+  +    S +    P+F+ +       D
Sbjct: 229 QSSMPPFPNEARQFNNMD----HHFNGFGEQNLVSTSTTSVQDCYNPSFNDYSSSNFVLD 288

Query: 131 MGNNKNNFNL-SSVLSSPCSSSPTQMNSNSTYFTSPN---EDERESYCSQILNFDVPDFF 178
              +  +FN  +SVL++P SSSP+    NS+Y  S +   EDE ESYCS ++ FD+PDF 
Sbjct: 289 PSYSDQSFNFANSVLNTP-SSSPSPTTLNSSYINSSSCSTEDEIESYCSNLMKFDIPDFL 344

[Close]

BLAST of Carg21466 vs. TAIR 10
Match: AT4G05100.1 (myb domain protein 74 )

HSP 1 Score: 42.4 bits (98), Expect = 4.7e-04
Identity = 54/186 (29.03%), Postives = 80/186 (43.01%), Query Frame = 0


Query: 1   MNLSSLL----GVQPLVNPELLKLAASLMSSERKSQSFSPQNRMQTIQFSHPQLEMQVPV 60
           MN+S L+      QPLVNPE+LKLA SL S++    +    N +   + +  Q    +P 
Sbjct: 159 MNMSRLMMSDGNHQPLVNPEILKLATSLFSNQNHPNNTHENNTVNQTEVNQYQTGYNMPG 218

Query: 61  QEIVQFPQLVEPIASELNDQWQISEGCNNIEIPTGFDYCGFDQQHAAAVMDNSYEMPTFS 120
            E             EL   + I +   N +          D       + NS       
Sbjct: 219 NE-------------ELQSWFPIMDQFTNFQ----------DLMPMKTTVQNSLSYDDDC 278

Query: 121 SHKDMGNNKNNFNLSSVLSSPCSSSPTQMNSNSTYF----TSPNEDERESYCSQIL---N 176
           S  +        + +SVL++P SSSPT +NS+S+ +    T   EDE+ESY S  +   +
Sbjct: 279 SKSNFVLEPYYSDFASVLTTP-SSSPTPLNSSSSTYINSSTCSTEDEKESYYSDNITNYS 320

The following BLAST results are available for this feature:

BLAST of Carg21466 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019650.1	2.0e-94	100.00	hypothetical protein SDJN02_18613, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6584037.1	2.0e-94	100.00	Transcription factor MYB102, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023519871.1	1.5e-92	98.34	transcription factor MYB102-like [Cucurbita pepo subsp. pepo]	[more]
AXF54217.1	1.5e-92	98.34	MYB15 [Cucurbita pepo]	[more]
XP_022927584.1	1.5e-92	98.34	transcription factor MYB102-like [Cucurbita moschata]	[more]

BLAST of Carg21466 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDR8	3.7e-06	30.39	Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1	[more]

BLAST of Carg21466 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIE8	7.1e-93	98.34	transcription factor MYB102-like OS=Cucurbita moschata OX=3662 GN=LOC111434371 P...	[more]
A0A345BTG0	7.1e-93	98.34	MYB15 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A6J1KNL9	5.1e-91	96.13	transcription factor MYB102-like OS=Cucurbita maxima OX=3661 GN=LOC111495134 PE=...	[more]
A0A5A7UQN0	8.2e-57	71.05	Protein ODORANT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold86...	[more]
A0A0A0LXA4	8.2e-57	71.05	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G07184...	[more]

BLAST of Carg21466 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21440.1	2.6e-07	30.39	MYB-like 102	[more]
AT4G05100.1	4.7e-04	29.03	myb domain protein 74	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 2..177
None	No IPR available	PANTHER	PTHR10641:SF1021	PROTEIN ODORANT1-LIKE	coord: 2..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21466-RA	Carg21466-RA	mRNA