Homology
BLAST of Carg21425 vs. NCBI nr
Match:
KAG7019446.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1825.4 bits (4727), Expect = 0.0e+00
Identity = 910/910 (100.00%), Postives = 910/910 (100.00%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN 900
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN 900
Query: 901 ESQSATVMHV 911
ESQSATVMHV
Sbjct: 901 ESQSATVMHV 910
BLAST of Carg21425 vs. NCBI nr
Match:
XP_022927392.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1810.8 bits (4689), Expect = 0.0e+00
Identity = 903/910 (99.23%), Postives = 906/910 (99.56%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFS FPSSVSGSGLNFGSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSVFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
MKENASAKSAEST ISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS
Sbjct: 121 MKENASAKSAESTFISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPF+SQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFESQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKISDKIWADDD+KPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISDKIWADDDSKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGKRFHEFTEESSLEVEHAAFNS DAEDIMDKPRVSKMEMEERIQMLS RLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSNRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN 900
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRI+VADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 ESQSATVMHV 911
ESQSATVMHV
Sbjct: 901 ESQSATVMHV 910
BLAST of Carg21425 vs. NCBI nr
Match:
XP_023000737.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1788.9 bits (4632), Expect = 0.0e+00
Identity = 893/910 (98.13%), Postives = 900/910 (98.90%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGF ALYCTQNSHYLLG SFFPSSVSGSGLNFGSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFSALYCTQNSHYLLGLSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVKNKVV VDGEDLFDNSE+ITRKTDLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVYVDGEDLFDNSERITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQ+NDKQHEEKRNGNWSNYIEPK TRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQINDKQHEEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKIS+KIWADDD KPTKDVLKVGKYGVQL+GNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISEKIWADDDIKPTKDVLKVGKYGVQLKGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGKRFHEFTEESSLEVEHAAFNS DA DIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAADIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGR EEALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRWEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMF+EAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFNEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADR LPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRILPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN 900
KEKRFPKDSVI+LIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRI+VADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIQLIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 ESQSATVMHV 911
ESQSA VMHV
Sbjct: 901 ESQSAAVMHV 910
BLAST of Carg21425 vs. NCBI nr
Match:
XP_023519692.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1780.0 bits (4609), Expect = 0.0e+00
Identity = 888/910 (97.58%), Postives = 897/910 (98.57%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPAL+CTQNSHYLLGFSFF SSVSGSGLN GSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDI+LASGNLLE DFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVK KV+CVD EDLFDNSE+ITRK DLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQVNDKQH EKRNGNWSNYIEPK TRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKIS+KIWADDDTK TKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGK+FHEFTEESSLEVEHAAFNS DAEDIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN 900
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRI+VADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 ESQSATVMHV 911
E QSA VMHV
Sbjct: 901 EFQSAAVMHV 910
BLAST of Carg21425 vs. NCBI nr
Match:
KAG6583820.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1687.2 bits (4368), Expect = 0.0e+00
Identity = 849/877 (96.81%), Postives = 849/877 (96.81%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKI RKTDLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKIPRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKS EDIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKS-------------------------EDIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQQ FSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQQFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSA LNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSACLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLS 878
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLS
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLS 852
BLAST of Carg21425 vs. ExPASy Swiss-Prot
Match:
Q9SA76 (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2279 PE=3 SV=1)
HSP 1 Score: 738.8 bits (1906), Expect = 7.4e-212
Identity = 366/616 (59.42%), Postives = 470/616 (76.30%), Query Frame = 0
Query: 304 GLSKSGKRFHEFTEESSLEVEHAAFN-SFDAEDIMDKPRVSKMEMEERIQMLSKRLNGAD 363
G + G + ++ ++S +E AF S ++ DI+DKP S++EME+RI+ L+K LNGAD
Sbjct: 389 GTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKPATSRVEMEDRIEKLAKVLNGAD 448
Query: 364 IDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKLRF 423
I+MPEW F++ +RSAKIRY+D++++R+I LGKLGNW+RVLQVIEWLQ ++R+KS+K+R
Sbjct: 449 INMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRI 508
Query: 424 IYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDS 483
IYTTAL+VLGK+RRPVEALNVFHAM SSYPD+VAY SIAVTLGQAG+++ELF VID+
Sbjct: 509 IYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDT 568
Query: 484 MRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPST 543
MRSPPKKKFK EKWDPRL+PD+V+YNAVLNACV+RK WEGAFWVLQ+LK++G +PS
Sbjct: 569 MRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSP 628
Query: 544 TTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTM 603
TYGL+MEVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+DEAV ++ M
Sbjct: 629 VTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDM 688
Query: 604 EKRGIVGSAALYYDFARCLCSAGRCEEAL----------------------------MQM 663
E RGIVGSAALYYD ARCLCSAGRC E L Q+
Sbjct: 689 ESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQL 748
Query: 664 EKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHG 723
+KIC+VANKPLVVTYTGLIQAC+DS N+++A YIF+ MK CSPNLVTCNI+LK YL G
Sbjct: 749 KKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGG 808
Query: 724 MFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQML 783
+F+EA+ELFQ MSE+G +I SD+ RVLPD YTFNTMLD +++WDDF + Y +ML
Sbjct: 809 LFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREML 868
Query: 784 LYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYS 843
+GYHFN KRHLRM++EA+R GK+E++E TW+H+ +++R P PLIKERF L +GD+
Sbjct: 869 RHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHI 928
Query: 844 EALSCIS----KHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLL-ARNDSPNP 886
A+S ++ K ++ FS SAW +L RF +DSV+ L+ V+ L +R++S +
Sbjct: 929 SAISSLADLNGKIEETELRAFSTSAWSRVL--SRFEQDSVLRLMDDVNRRLGSRSESSDS 988
BLAST of Carg21425 vs. ExPASy Swiss-Prot
Match:
Q9FJW6 (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DG1 PE=1 SV=2)
HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-112
Identity = 222/561 (39.57%), Postives = 342/561 (60.96%), Query Frame = 0
Query: 349 ERIQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEW 408
E +++L RL+G +I+ W F +MM + +++++ +L+++ LG+ +WK+ V+ W
Sbjct: 183 EAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHW 242
Query: 409 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLG 468
+ ++ K + RF+YT L VLG ARRP EAL +F+ M YPD+ AYH IAVTLG
Sbjct: 243 VYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLG 302
Query: 469 QAGYMRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFW 528
QAG ++EL VI+ MR P K K + WDP L+PD+V+YNA+LNACV W+ W
Sbjct: 303 QAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSW 362
Query: 529 VLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKS-SIPNALTYKVLVNTLW 588
V EL++ GL+P+ TYGL MEVML+ GK++ VH+FFRK++ S P A+TYKVLV LW
Sbjct: 363 VFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALW 422
Query: 589 KEGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVAN-KPLV 648
+EGK +EAV A++ ME++G++G+ ++YY+ A CLC+ GR +A++++ ++ ++ N +PL
Sbjct: 423 REGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLE 482
Query: 649 VTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNM 708
+T+TGLI A L+ ++ + IF +MK C PN+ T N++LK Y + MF EAKELF+ +
Sbjct: 483 ITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEI 542
Query: 709 SENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHL 768
VS ++P+ YT++ ML+AS +W+ F H Y M+L GY + +H
Sbjct: 543 ---------VSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHA 602
Query: 769 RMIMEAARGGKDELLETTWKHLAQADRTLPPPL-IKERFCIMLARGDYSEALSCISKHHS 828
M++EA+R GK LLE + + + D +P PL E C A+GD+ A++ I+ +
Sbjct: 603 SMLIEASRAGKWSLLEHAFDAVLE-DGEIPHPLFFTELLCHATAKGDFQRAITLINT-VA 662
Query: 829 SDEHHFSKSAWLNLLKEKR--FPKDSVIELIHKVSMLLARND-SPNPVLQNLLLSGKEFC 888
S+ W +L +E + +D+ +HK+S L D P + NL S K C
Sbjct: 663 LASFQISEEEWTDLFEEHQDWLTQDN----LHKLSDHLIECDYVSEPTVSNLSKSLKSRC 722
Query: 889 RSRITVADPRLEEVVCTNESQ 904
S + A P L V T +SQ
Sbjct: 723 GSSSSSAQPLL-AVDVTTQSQ 727
BLAST of Carg21425 vs. ExPASy Swiss-Prot
Match:
Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)
HSP 1 Score: 112.5 bits (280), Expect = 2.6e-23
Identity = 103/477 (21.59%), Postives = 199/477 (41.72%), Query Frame = 0
Query: 354 LSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRE 413
LS L G D +F M++S + + R+ + K ++ VL + + QM
Sbjct: 60 LSSGLVGIKADDAVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCK--QMES 119
Query: 414 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYM 473
+ +H + + + ++ + R+ A + + + PD V ++++ L +
Sbjct: 120 KGIAHSI-YTLSIMINCFCRCRKLSYAFSTMGKIMK-LGYEPDTVIFNTLLNGLCLECRV 179
Query: 474 RELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQEL 533
E +++D M K P ++ N ++N A ++ +
Sbjct: 180 SEALELVDRMVEMGHK---------------PTLITLNTLVNGLCLNGKVSDAVVLIDRM 239
Query: 534 KEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIP-NALTYKVLVNTLWKEGKT 593
E G QP+ TYG V+ VM + G+ L E RK+++ +I +A+ Y ++++ L K+G
Sbjct: 240 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 299
Query: 594 DEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGL 653
D A ME +G Y C+AGR ++ + + K P VVT++ L
Sbjct: 300 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 359
Query: 654 IQACLDSKNLQSAVYIFNH-MKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGR 713
I + + L+ A + M+ +PN +T N L+ G+ +EA ++ M G
Sbjct: 360 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 419
Query: 714 NISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIME 773
+ PDI TFN +++ R DD + +M L G N + ++
Sbjct: 420 D------------PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 479
Query: 774 AARGGKDELLETTWKHLAQADRTLPPPLIKERFCI--MLARGDYSEALSCISKHHSS 827
+ GK E+ + ++ + R + P ++ + + + G+ +AL K S
Sbjct: 480 FCQSGKLEVAKKLFQEM--VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
BLAST of Carg21425 vs. ExPASy Swiss-Prot
Match:
Q0WPZ6 (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX=3702 GN=At2g17140 PE=2 SV=1)
HSP 1 Score: 109.8 bits (273), Expect = 1.7e-22
Identity = 58/215 (26.98%), Postives = 108/215 (50.23%), Query Frame = 0
Query: 501 PRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPSTTTYGLVMEVMLQCGKYNL 560
P +P + +YN +L +C+K + E W+ +++ G+ P T T+ L++ + +
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 561 VHEFFRKV-QKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFAR 620
E F ++ +K PN T+ +LV K G TD+ + + ME G++ + +Y
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 621 CLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMK-----A 680
C GR +++ +EK+ + P +VT+ I A + A IF+ M+
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 681 FCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSEN 710
PN +T N++LKG+ G+ ++AK LF+++ EN
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
BLAST of Carg21425 vs. ExPASy Swiss-Prot
Match:
Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 2.4e-21
Identity = 73/327 (22.32%), Postives = 146/327 (44.65%), Query Frame = 0
Query: 504 QPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHE 563
+PD+V + ++N + A ++ + E G QP TYG V+ + + G L +
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 564 FFRKVQKSSI-PNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLC 623
FRK+++ +I + + Y +++++L K+G D+A+ ME +GI Y LC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 624 SAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHM-KAFCSPNLV 683
+ G+ ++ + ++ P VVT++ LI + L A ++N M +P+ +
Sbjct: 292 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 684 TCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEK 743
T N L+ G+ EA ++F M G PDI T++ ++++ K
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCE------------PDIVTYSILINSYCKAK 411
Query: 744 RWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPPLIK 803
R DD + ++ G N + +++ + GK + ++ + R +PP ++
Sbjct: 412 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM--VSRGVPPSVVT 471
Query: 804 ERFCI--MLARGDYSEALSCISKHHSS 827
+ + G+ ++AL K S
Sbjct: 472 YGILLDGLCDNGELNKALEIFEKMQKS 484
BLAST of Carg21425 vs. ExPASy TrEMBL
Match:
A0A6J1EH18 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434226 PE=4 SV=1)
HSP 1 Score: 1810.8 bits (4689), Expect = 0.0e+00
Identity = 903/910 (99.23%), Postives = 906/910 (99.56%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFS FPSSVSGSGLNFGSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSVFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
MKENASAKSAEST ISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS
Sbjct: 121 MKENASAKSAESTFISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPF+SQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFESQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKISDKIWADDD+KPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISDKIWADDDSKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGKRFHEFTEESSLEVEHAAFNS DAEDIMDKPRVSKMEMEERIQMLS RLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSNRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN 900
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRI+VADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 ESQSATVMHV 911
ESQSATVMHV
Sbjct: 901 ESQSATVMHV 910
BLAST of Carg21425 vs. ExPASy TrEMBL
Match:
A0A6J1KEH7 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495096 PE=4 SV=1)
HSP 1 Score: 1788.9 bits (4632), Expect = 0.0e+00
Identity = 893/910 (98.13%), Postives = 900/910 (98.90%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGF ALYCTQNSHYLLG SFFPSSVSGSGLNFGSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFSALYCTQNSHYLLGLSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVKNKVV VDGEDLFDNSE+ITRKTDLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVYVDGEDLFDNSERITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQ+NDKQHEEKRNGNWSNYIEPK TRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQINDKQHEEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKIS+KIWADDD KPTKDVLKVGKYGVQL+GNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISEKIWADDDIKPTKDVLKVGKYGVQLKGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGKRFHEFTEESSLEVEHAAFNS DA DIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAADIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGR EEALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRWEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMF+EAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFNEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADR LPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRILPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN 900
KEKRFPKDSVI+LIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRI+VADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIQLIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 ESQSATVMHV 911
ESQSA VMHV
Sbjct: 901 ESQSAAVMHV 910
BLAST of Carg21425 vs. ExPASy TrEMBL
Match:
A0A0A0LVN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1)
HSP 1 Score: 1485.7 bits (3845), Expect = 0.0e+00
Identity = 754/907 (83.13%), Postives = 811/907 (89.42%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMAN NLCIP CE GFP L+CT NSH SFFPSSVSG+ + AK+RVLRH
Sbjct: 1 MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
R HKCG+IKA S GESDI L SGNLLE DFQFKPSFDEYV+VME+VR+RRYKRQ DDPNK
Sbjct: 61 RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
Query: 121 --MKENASAKSAESTSISNI------VTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTD 180
MKEN SAKSAESTSIS I VTDVQ N+DVKN VD +DLF+N+E+I + D
Sbjct: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
Query: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKR 240
LSGNKFD +RK VTRS D++KGK+TPF S VNDKQHEEKRN NWS+YIEP+ TRSN K
Sbjct: 181 LSGNKFD-RRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKP 240
Query: 241 LHFKANTLDVKSESHGVRYGSSMKISDKIWA--DDDTKPTKDVLKVGKYGVQLEGNYIPG 300
+HFKANTL+VK ES V G+SMK S+KIWA DDD KP K VLK GKYG+QLE +Y PG
Sbjct: 241 IHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPG 300
Query: 301 DKVGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEER 360
DKVGRKKTEQSYRG S SGKRF EF E++SLEVEHAAFN+FDA DIMDKPRVSKMEMEER
Sbjct: 301 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEER 360
Query: 361 IQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQ 420
IQMLSKRLNGADIDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQ+IEWLQ
Sbjct: 361 IQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQ 420
Query: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQA 480
MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQA
Sbjct: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
Query: 481 GYMRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVL 540
GYMRELFDVIDSMRSPPKKKFKTG EKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVL
Sbjct: 481 GYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
Query: 541 QELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600
QELK+Q LQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG
Sbjct: 541 QELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600
Query: 601 KTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYT 660
KTDEAVLAI+ ME RGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYT
Sbjct: 601 KTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYT 660
Query: 661 GLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENG 720
GLIQACLDSK+LQSAVYIFNHMKAFCSPNLVT NILLKGYL+HGMF+EA+ELFQN+SE
Sbjct: 661 GLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQR 720
Query: 721 RNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIM 780
RNIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRMI+
Sbjct: 721 RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMIL 780
Query: 781 EAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHH 840
EAARGGKDELLETTWKHLAQADRT PPPL+KERFC+ LARGDYSEALS I H+S D HH
Sbjct: 781 EAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHH 840
Query: 841 FSKSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVAD 898
FS+SAWLNLLKEKRFP+D+VIELIHKV M+L RN+SPNPV +NLLLS KEFCR+RI++AD
Sbjct: 841 FSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLAD 900
BLAST of Carg21425 vs. ExPASy TrEMBL
Match:
A0A1S3C8Z0 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498323 PE=4 SV=1)
HSP 1 Score: 1484.5 bits (3842), Expect = 0.0e+00
Identity = 753/913 (82.48%), Postives = 813/913 (89.05%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSG--LNFGSAKSRVL 60
MVGVIMAN NL IP CE GFP L+CT NSH SFFPSSVSG G LNF AK+RVL
Sbjct: 1 MVGVIMANVNLSIPNCERYGFPTLHCTHNSHTSFWVSFFPSSVSGGGTDLNFSDAKNRVL 60
Query: 61 RHRGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDP 120
RHR HKCG+IKA S GESDI L +GNLLE DFQFKPSFDEYV+VME+VR+RRYKRQ D P
Sbjct: 61 RHRIHKCGSIKALSNGESDISLPNGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDYP 120
Query: 121 NK--MKENASAKSAESTSISNI------VTDVQGNMDVKNKVVCVDGEDLFDNSEKITRK 180
NK MKEN SAKSAESTSIS I VTDVQ N++VKN VD +DLF+N+E+I R+
Sbjct: 121 NKLTMKENCSAKSAESTSISKIDNGKNKVTDVQHNVEVKNMFKRVDKKDLFNNTERIARE 180
Query: 181 TDLSGNKFDSKRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHD 240
LSGNKFD + KGVTRS D++KGK+TPF S VNDKQHEEK+NGNWS+YIEPK TRSN +
Sbjct: 181 KHLSGNKFD-RSKGVTRSNDKVKGKMTPFGSLVNDKQHEEKKNGNWSSYIEPKVTRSNCE 240
Query: 241 KRLHFKANTLDVKSESHGVRYGSSMKISDKIWA--DDDTKPTKDVLKVGKYGVQLEGNYI 300
K +HFKAN L+ K E V YG+SMK S+KIWA +DD KP KDVLK GKYG+QLE +Y
Sbjct: 241 KPIHFKANALEFKKEGSRVSYGNSMKTSEKIWAWGEDDAKPAKDVLKAGKYGIQLERSYS 300
Query: 301 PGDKVGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEME 360
PGDKVGRKKTEQSYRG S SGKRF EFTEE+SLEVEHAAFN+FDA DIMDKPRVSKMEME
Sbjct: 301 PGDKVGRKKTEQSYRGTSTSGKRFLEFTEENSLEVEHAAFNNFDALDIMDKPRVSKMEME 360
Query: 361 ERIQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEW 420
ERIQMLSKRLNGADIDMPEWMF+QMMR AKIRYSDHSILRVIQVLGKLGNW+RVLQVIEW
Sbjct: 361 ERIQMLSKRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW 420
Query: 421 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLG 480
LQMRERFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLG
Sbjct: 421 LQMRERFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 480
Query: 481 QAGYMRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFW 540
QAGYMRELFDVIDSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKN EGAFW
Sbjct: 481 QAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 540
Query: 541 VLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWK 600
VLQELK+QGLQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWK
Sbjct: 541 VLQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWK 600
Query: 601 EGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVT 660
EGKTDEAVLAI+ ME RG+VGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVT
Sbjct: 601 EGKTDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVT 660
Query: 661 YTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSE 720
YTGLIQACLDSK+LQSAVY+FN MKAFCSPNLVT NILLKGYL+HGMF+EA+EL QN+SE
Sbjct: 661 YTGLIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNILLKGYLEHGMFEEARELLQNLSE 720
Query: 721 NGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRM 780
+NIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRM
Sbjct: 721 QRQNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRM 780
Query: 781 IMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDE 840
I+EAAR GKDELLETTWKHLAQADRT PPPL+KERFC+ +ARGDY+EAL CIS H+S D
Sbjct: 781 ILEAARVGKDELLETTWKHLAQADRTPPPPLLKERFCMKVARGDYTEALRCISNHNSGDA 840
Query: 841 HHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITV 900
HHFS+SAWLNLLKEKRFPKD+VIELIHKV M+ A N+SPNPV +NLLLS KEFCR+RI+V
Sbjct: 841 HHFSESAWLNLLKEKRFPKDTVIELIHKVGMVFATNESPNPVFKNLLLSCKEFCRTRISV 900
Query: 901 ADPRLEEVVCTNE 902
AD RLEE V TNE
Sbjct: 901 ADHRLEETVHTNE 912
BLAST of Carg21425 vs. ExPASy TrEMBL
Match:
A0A6J1CLQ9 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012614 PE=4 SV=1)
HSP 1 Score: 1478.0 bits (3825), Expect = 0.0e+00
Identity = 745/918 (81.15%), Postives = 814/918 (88.67%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
MVGVIMANAN+CIPCCE NGF AL+CTQ+SH L GFS FPS +SG GLN G K+R+ R+
Sbjct: 1 MVGVIMANANMCIPCCERNGFRALHCTQSSHNLFGFSLFPSPISGIGLNVGYEKNRIFRY 60
Query: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPN- 120
RG+KCGAI+ SSKGESDI+L +GN+LE DF FKPSFDEYVRVMESVR+ RYK+Q DDPN
Sbjct: 61 RGNKCGAIRVSSKGESDIRLQNGNVLENDFLFKPSFDEYVRVMESVRTSRYKKQPDDPNK 120
Query: 121 -KMKENASAKSAESTSISNI------VTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTD 180
KMKENASAKSAES+S+S I VTDVQGN+DVKN VD + LF+N+E++TRK D
Sbjct: 121 LKMKENASAKSAESSSVSEIDNEKTKVTDVQGNVDVKNMFKRVDQKKLFNNAERVTRKKD 180
Query: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKR 240
L NKFD+KRKG+TR+KDE +GKVT FDSQVNDKQHEE+R N + IEPK R N++
Sbjct: 181 LLENKFDNKRKGITRTKDEFRGKVTHFDSQVNDKQHEEQRKRNRLDCIEPKVRRLNNEAL 240
Query: 241 LHFKANTLDVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDK 300
+ KANTLD+K + V SSMK ++IWAD DTK K L+VGK GVQL NY+PG+K
Sbjct: 241 VCSKANTLDIKRQRQRVCDESSMKTVERIWADGDTKLAKGDLEVGKSGVQLARNYVPGEK 300
Query: 301 VGRKKTEQSYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQ 360
V KKT QSY+GLSKSGK F E TEESSLEVE AA N+FDA DIMDKPRVSKMEMEERIQ
Sbjct: 301 VSGKKTGQSYQGLSKSGKPFIESTEESSLEVERAALNNFDALDIMDKPRVSKMEMEERIQ 360
Query: 361 MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR 420
MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR
Sbjct: 361 MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR 420
Query: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY
Sbjct: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
Query: 481 MRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE 540
MRELFDVIDSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE
Sbjct: 481 MRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE 540
Query: 541 LKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKT 600
LK+QGLQPST+TYGLVMEVML+CGKYNLVHEFFRKVQ+SSIPNALTYKVLVNTL KEGKT
Sbjct: 541 LKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQRSSIPNALTYKVLVNTLSKEGKT 600
Query: 601 DEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGL 660
DEAVLAIQ ME+RGIVGSAALYYDFARCLCSAGRC+EALMQ+EKICKVANKPLVVTYTGL
Sbjct: 601 DEAVLAIQNMERRGIVGSAALYYDFARCLCSAGRCKEALMQIEKICKVANKPLVVTYTGL 660
Query: 661 IQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRN 720
IQACLDSKNL SAVYIFNHMKAFCSPNLVT NILLKGYLDHGMF+EA+ELFQN+SE+G++
Sbjct: 661 IQACLDSKNLDSAVYIFNHMKAFCSPNLVTYNILLKGYLDHGMFEEARELFQNLSESGQS 720
Query: 721 ISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEA 780
IS +SDY+DRVLPDIYTFN MLDA FA KRWDDF +FYNQM LYGYHFNPKRHLRMI+EA
Sbjct: 721 ISTISDYKDRVLPDIYTFNIMLDAFFAVKRWDDFGYFYNQMFLYGYHFNPKRHLRMILEA 780
Query: 781 ARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFS 840
R GKDE+LETTWKHLAQ DRTLPPPL+KERFC+ LARGDYSEALSCIS HHSSD HHFS
Sbjct: 781 GRAGKDEILETTWKHLAQTDRTLPPPLVKERFCMKLARGDYSEALSCISNHHSSDAHHFS 840
Query: 841 KSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPR 900
+SAWLNLLKEK FPKD+VI LIHKVSMLL N PNPV QNLL S KEFCR+RITVAD +
Sbjct: 841 ESAWLNLLKEKGFPKDTVILLIHKVSMLLTGNHPPNPVFQNLLSSCKEFCRTRITVADSK 900
Query: 901 LEEVVCTNESQSATVMHV 911
LE++VC +E+QSA VMH+
Sbjct: 901 LEQIVCRDETQSAAVMHI 918
BLAST of Carg21425 vs. TAIR 10
Match:
AT1G30610.2 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 751.1 bits (1938), Expect = 1.0e-216
Identity = 365/588 (62.07%), Postives = 469/588 (79.76%), Query Frame = 0
Query: 304 GLSKSGKRFHEFTEESSLEVEHAAFN-SFDAEDIMDKPRVSKMEMEERIQMLSKRLNGAD 363
G + G + ++ ++S +E AF S ++ DI+DKP S++EME+RI+ L+K LNGAD
Sbjct: 389 GTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKPATSRVEMEDRIEKLAKVLNGAD 448
Query: 364 IDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKLRF 423
I+MPEW F++ +RSAKIRY+D++++R+I LGKLGNW+RVLQVIEWLQ ++R+KS+K+R
Sbjct: 449 INMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRI 508
Query: 424 IYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDS 483
IYTTAL+VLGK+RRPVEALNVFHAM SSYPD+VAY SIAVTLGQAG+++ELF VID+
Sbjct: 509 IYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDT 568
Query: 484 MRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPST 543
MRSPPKKKFK EKWDPRL+PD+V+YNAVLNACV+RK WEGAFWVLQ+LK++G +PS
Sbjct: 569 MRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSP 628
Query: 544 TTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTM 603
TYGL+MEVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+DEAV ++ M
Sbjct: 629 VTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDM 688
Query: 604 EKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSKNL 663
E RGIVGSAALYYD ARCLCSAGRC E L ++KIC+VANKPLVVTYTGLIQAC+DS N+
Sbjct: 689 ESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNI 748
Query: 664 QSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYRDR 723
++A YIF+ MK CSPNLVTCNI+LK YL G+F+EA+ELFQ MSE+G +I SD+ R
Sbjct: 749 KNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESR 808
Query: 724 VLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDELLE 783
VLPD YTFNTMLD +++WDDF + Y +ML +GYHFN KRHLRM++EA+R GK+E++E
Sbjct: 809 VLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVME 868
Query: 784 TTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCIS----KHHSSDEHHFSKSAWLN 843
TW+H+ +++R P PLIKERF L +GD+ A+S ++ K ++ FS SAW
Sbjct: 869 ATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSR 928
Query: 844 LLKEKRFPKDSVIELIHKVSMLL-ARNDSPNPVLQNLLLSGKEFCRSR 886
+L RF +DSV+ L+ V+ L +R++S + VL NLL S K++ ++R
Sbjct: 929 VL--SRFEQDSVLRLMDDVNRRLGSRSESSDSVLGNLLSSCKDYLKTR 974
HSP 2 Score: 39.7 bits (91), Expect = 1.5e-02
Identity = 16/30 (53.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query: 87 EKDFQFKPSFDEYVRVMESVRSRRYKRQSD 117
+K F+FKPSFD+Y+++MESV++ R K++ D
Sbjct: 68 DKGFEFKPSFDQYLQIMESVKTARKKKKFD 97
BLAST of Carg21425 vs. TAIR 10
Match:
AT1G30610.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 738.8 bits (1906), Expect = 5.2e-213
Identity = 366/616 (59.42%), Postives = 470/616 (76.30%), Query Frame = 0
Query: 304 GLSKSGKRFHEFTEESSLEVEHAAFN-SFDAEDIMDKPRVSKMEMEERIQMLSKRLNGAD 363
G + G + ++ ++S +E AF S ++ DI+DKP S++EME+RI+ L+K LNGAD
Sbjct: 389 GTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKPATSRVEMEDRIEKLAKVLNGAD 448
Query: 364 IDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKLRF 423
I+MPEW F++ +RSAKIRY+D++++R+I LGKLGNW+RVLQVIEWLQ ++R+KS+K+R
Sbjct: 449 INMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRI 508
Query: 424 IYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDS 483
IYTTAL+VLGK+RRPVEALNVFHAM SSYPD+VAY SIAVTLGQAG+++ELF VID+
Sbjct: 509 IYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDT 568
Query: 484 MRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPST 543
MRSPPKKKFK EKWDPRL+PD+V+YNAVLNACV+RK WEGAFWVLQ+LK++G +PS
Sbjct: 569 MRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSP 628
Query: 544 TTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTM 603
TYGL+MEVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+DEAV ++ M
Sbjct: 629 VTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDM 688
Query: 604 EKRGIVGSAALYYDFARCLCSAGRCEEAL----------------------------MQM 663
E RGIVGSAALYYD ARCLCSAGRC E L Q+
Sbjct: 689 ESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQL 748
Query: 664 EKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHG 723
+KIC+VANKPLVVTYTGLIQAC+DS N+++A YIF+ MK CSPNLVTCNI+LK YL G
Sbjct: 749 KKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGG 808
Query: 724 MFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQML 783
+F+EA+ELFQ MSE+G +I SD+ RVLPD YTFNTMLD +++WDDF + Y +ML
Sbjct: 809 LFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREML 868
Query: 784 LYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYS 843
+GYHFN KRHLRM++EA+R GK+E++E TW+H+ +++R P PLIKERF L +GD+
Sbjct: 869 RHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHI 928
Query: 844 EALSCIS----KHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLL-ARNDSPNP 886
A+S ++ K ++ FS SAW +L RF +DSV+ L+ V+ L +R++S +
Sbjct: 929 SAISSLADLNGKIEETELRAFSTSAWSRVL--SRFEQDSVLRLMDDVNRRLGSRSESSDS 988
HSP 2 Score: 39.7 bits (91), Expect = 1.5e-02
Identity = 16/30 (53.33%), Postives = 26/30 (86.67%), Query Frame = 0
Query: 87 EKDFQFKPSFDEYVRVMESVRSRRYKRQSD 117
+K F+FKPSFD+Y+++MESV++ R K++ D
Sbjct: 68 DKGFEFKPSFDQYLQIMESVKTARKKKKFD 97
BLAST of Carg21425 vs. TAIR 10
Match:
AT5G67570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 408.7 bits (1049), Expect = 1.2e-113
Identity = 222/561 (39.57%), Postives = 342/561 (60.96%), Query Frame = 0
Query: 349 ERIQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEW 408
E +++L RL+G +I+ W F +MM + +++++ +L+++ LG+ +WK+ V+ W
Sbjct: 183 EAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHW 242
Query: 409 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLG 468
+ ++ K + RF+YT L VLG ARRP EAL +F+ M YPD+ AYH IAVTLG
Sbjct: 243 VYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLG 302
Query: 469 QAGYMRELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFW 528
QAG ++EL VI+ MR P K K + WDP L+PD+V+YNA+LNACV W+ W
Sbjct: 303 QAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSW 362
Query: 529 VLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKS-SIPNALTYKVLVNTLW 588
V EL++ GL+P+ TYGL MEVML+ GK++ VH+FFRK++ S P A+TYKVLV LW
Sbjct: 363 VFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALW 422
Query: 589 KEGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVAN-KPLV 648
+EGK +EAV A++ ME++G++G+ ++YY+ A CLC+ GR +A++++ ++ ++ N +PL
Sbjct: 423 REGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLE 482
Query: 649 VTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNM 708
+T+TGLI A L+ ++ + IF +MK C PN+ T N++LK Y + MF EAKELF+ +
Sbjct: 483 ITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEI 542
Query: 709 SENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHL 768
VS ++P+ YT++ ML+AS +W+ F H Y M+L GY + +H
Sbjct: 543 ---------VSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHA 602
Query: 769 RMIMEAARGGKDELLETTWKHLAQADRTLPPPL-IKERFCIMLARGDYSEALSCISKHHS 828
M++EA+R GK LLE + + + D +P PL E C A+GD+ A++ I+ +
Sbjct: 603 SMLIEASRAGKWSLLEHAFDAVLE-DGEIPHPLFFTELLCHATAKGDFQRAITLINT-VA 662
Query: 829 SDEHHFSKSAWLNLLKEKR--FPKDSVIELIHKVSMLLARND-SPNPVLQNLLLSGKEFC 888
S+ W +L +E + +D+ +HK+S L D P + NL S K C
Sbjct: 663 LASFQISEEEWTDLFEEHQDWLTQDN----LHKLSDHLIECDYVSEPTVSNLSKSLKSRC 722
Query: 889 RSRITVADPRLEEVVCTNESQ 904
S + A P L V T +SQ
Sbjct: 723 GSSSSSAQPLL-AVDVTTQSQ 727
BLAST of Carg21425 vs. TAIR 10
Match:
AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 112.5 bits (280), Expect = 1.8e-24
Identity = 103/477 (21.59%), Postives = 199/477 (41.72%), Query Frame = 0
Query: 354 LSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRE 413
LS L G D +F M++S + + R+ + K ++ VL + + QM
Sbjct: 60 LSSGLVGIKADDAVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCK--QMES 119
Query: 414 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYM 473
+ +H + + + ++ + R+ A + + + PD V ++++ L +
Sbjct: 120 KGIAHSI-YTLSIMINCFCRCRKLSYAFSTMGKIMK-LGYEPDTVIFNTLLNGLCLECRV 179
Query: 474 RELFDVIDSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQEL 533
E +++D M K P ++ N ++N A ++ +
Sbjct: 180 SEALELVDRMVEMGHK---------------PTLITLNTLVNGLCLNGKVSDAVVLIDRM 239
Query: 534 KEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIP-NALTYKVLVNTLWKEGKT 593
E G QP+ TYG V+ VM + G+ L E RK+++ +I +A+ Y ++++ L K+G
Sbjct: 240 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 299
Query: 594 DEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGL 653
D A ME +G Y C+AGR ++ + + K P VVT++ L
Sbjct: 300 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 359
Query: 654 IQACLDSKNLQSAVYIFNH-MKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGR 713
I + + L+ A + M+ +PN +T N L+ G+ +EA ++ M G
Sbjct: 360 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 419
Query: 714 NISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIME 773
+ PDI TFN +++ R DD + +M L G N + ++
Sbjct: 420 D------------PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 479
Query: 774 AARGGKDELLETTWKHLAQADRTLPPPLIKERFCI--MLARGDYSEALSCISKHHSS 827
+ GK E+ + ++ + R + P ++ + + + G+ +AL K S
Sbjct: 480 FCQSGKLEVAKKLFQEM--VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
BLAST of Carg21425 vs. TAIR 10
Match:
AT2G17140.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 109.8 bits (273), Expect = 1.2e-23
Identity = 58/215 (26.98%), Postives = 108/215 (50.23%), Query Frame = 0
Query: 501 PRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPSTTTYGLVMEVMLQCGKYNL 560
P +P + +YN +L +C+K + E W+ +++ G+ P T T+ L++ + +
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 561 VHEFFRKV-QKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFAR 620
E F ++ +K PN T+ +LV K G TD+ + + ME G++ + +Y
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 621 CLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMK-----A 680
C GR +++ +EK+ + P +VT+ I A + A IF+ M+
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 681 FCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSEN 710
PN +T N++LKG+ G+ ++AK LF+++ EN
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7019446.1 | 0.0e+00 | 100.00 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022927392.1 | 0.0e+00 | 99.23 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chlo... | [more] |
XP_023000737.1 | 0.0e+00 | 98.13 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita ... | [more] |
XP_023519692.1 | 0.0e+00 | 97.58 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita ... | [more] |
KAG6583820.1 | 0.0e+00 | 96.81 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9SA76 | 7.4e-212 | 59.42 | Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop... | [more] |
Q9FJW6 | 1.7e-112 | 39.57 | Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop... | [more] |
Q9LPX2 | 2.6e-23 | 21.59 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... | [more] |
Q0WPZ6 | 1.7e-22 | 26.98 | Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX... | [more] |
Q6NQ83 | 2.4e-21 | 22.32 | Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EH18 | 0.0e+00 | 99.23 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chlo... | [more] |
A0A6J1KEH7 | 0.0e+00 | 98.13 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbit... | [more] |
A0A0A0LVN7 | 0.0e+00 | 83.13 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1 | [more] |
A0A1S3C8Z0 | 0.0e+00 | 82.48 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis ... | [more] |
A0A6J1CLQ9 | 0.0e+00 | 81.15 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordic... | [more] |
Match Name | E-value | Identity | Description | |
AT1G30610.2 | 1.0e-216 | 62.07 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G30610.1 | 5.2e-213 | 59.42 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT5G67570.1 | 1.2e-113 | 39.57 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G12775.1 | 1.8e-24 | 21.59 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G17140.1 | 1.2e-23 | 26.98 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |