Carg21197 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21197
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein indeterminate-domain 5, chloroplastic-like
Location	Carg_Chr18: 7265420 .. 7267236 (+)
RNA-Seq Expression	Carg21197
Synteny	Carg21197

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCTCTTCAAGATATTCCCAATATAACCCAATCCGATGTCCTCCGCCTTGGCGGCGGAGGACGAACCGGGCAGTTTAATCATCTTCTTCCTCCGTCTATCGGCTCGTCGTTTCGACCACCACCGCAACAAGCAATGCCGTCTTCGGCTGCGGCTGCGGCGTTCTTCTTGAATGATCAAACTAGCCAGAATAGCTTCCATGAGGATCATGGAAGTCAATCTCAACAAGGGTTGTTTGGAAACAAGGCGTTTCATGGATTAATGCAATTTTCTGATATGCAAAGTCATACGAGTAATAGTAACAACCCTTCCTCAAATCTCTTCAATTTGGGGTTCATTTCGAACCCGACTGGTGATAGTACGACGAATATGAACAACAACAACAACAACACCAACAGTAATAATACGAGTAATAGCAACAACAACAGCAACAGCAACAACAACAATCTTCAATCGTCTTTGCTTAATCAATTCAATGGCACGAACAATGGCAACAATGAAGGTGGTGCATCAAACATTTTCTCAATGATGGGCGATCAAATGAATTCAGGTGCAGTCCCGTCTCTCTATAGCAACACGACGGGAGTCGGCGGTAGCGGTACGAGCGGAGCAATTCCACACATGTCAGCAACGGCGCTTCTCCAAAAGGCAGCTCAATTAGGCTCAACAACGTCAAGTAGCAACACAACAGCGACATTGCTACGATCATTTGGAAGCTCGTCAACTTCAGGTGGGAAAGCATCCGACAGGACGCTTTTCCCACCGAGCTACGGCGGAGTATTCGGTGAAAATGAGAGCAATCTTCAAGATCTGATGAATTCATTCACCACCGGAAGCTCAGCAGGCGGGCTCTTCGGTGGCGGAATGAGCTCATTCGGTACATTCGACGGCGGAAATAATAGACCAAACAACATGGAAACATTGGAAGATCCAAAACTACAACAAAATCTAAGCTCAGTTAGCATGGGAGGAACAGATAGATTAACAAGAGACTTCCTAGGTGTTGGACAAATTGTAAGAAGTATGAGTAGCGGAGGAGGAGGAGGAGGCGGCGGTGGCGGCGGTTATTCGCAACGAGAACATAAACAACCGCCGCAAGGGATCGTTATGGAGGGAAATGAGAGCAATTCAGCTGCATCAAGCCAAGCATTTGGTGGTGGAGGAAATGGAAACTACCAGTGAAGAAGAAGAAGAAGAAGAACAAAGTACAGACAGAAACAGGTACGTACATGAAAATAAAAATTTTAAATTATTAATTATTATTTTTATTTAACTGCAAAAGTAACGTGGAGGGCTTTGGTAATTGTGTCATTTTTTTTTAAATTAAAAAAAAAATTACTAATTTACTGTTACTGCCTTGCAGTCGTGGGGATTTGGATTTGGATTTATTTTATTATTTTTATTATATTTAATTAAAAAATTAAAATTTTTTTTTAAAAAAAGGTGTTTTTATTCCGTCTGGCACGTTATGTTGCATGAAGACAGTGAAGAGCATGCAGTACATTTAGGGTTTTTTGTTTCATTCGTTGTCGTTTTTGTTCTCTTTATGTCGTTACGTCTTTATACTGCACAACACACAGAGAGTCACGAGTTCCATTTCTTCCATTCTTTCATACTTTATTATAAAAAATATATATGCATTAAAACCTTATAATATAATTATATTTTGTTACTTTTTCATATATTATAATTAATATGCTTATAATATGCTTATCAGATATTATAAATGCAACAAATCTCTCCAAGCTACCAAGCTGCTTAAGTTCAGTGATCTCCACAAATATCAGGTAGTTTTTTTTTTCTTTTTTTTTCTT

mRNA sequence

ATGTCATCTCTTCAAGATATTCCCAATATAACCCAATCCGATGTCCTCCGCCTTGGCGGCGGAGGACGAACCGGGCAGTTTAATCATCTTCTTCCTCCGTCTATCGGCTCGTCGTTTCGACCACCACCGCAACAAGCAATGCCGTCTTCGGCTGCGGCTGCGGCGTTCTTCTTGAATGATCAAACTAGCCAGAATAGCTTCCATGAGGATCATGGAAGTCAATCTCAACAAGGGTTGTTTGGAAACAAGGCGTTTCATGGATTAATGCAATTTTCTGATATGCAAAGTCATACGAGTAATAGTAACAACCCTTCCTCAAATCTCTTCAATTTGGGGTTCATTTCGAACCCGACTGGTGATAGTACGACGAATATGAACAACAACAACAACAACACCAACAGTAATAATACGAGTAATAGCAACAACAACAGCAACAGCAACAACAACAATCTTCAATCGTCTTTGCTTAATCAATTCAATGGCACGAACAATGGCAACAATGAAGGTGGTGCATCAAACATTTTCTCAATGATGGGCGATCAAATGAATTCAGGTGCAGTCCCGTCTCTCTATAGCAACACGACGGGAGTCGGCGGTAGCGGTACGAGCGGAGCAATTCCACACATGTCAGCAACGGCGCTTCTCCAAAAGGCAGCTCAATTAGGCTCAACAACGTCAAGTAGCAACACAACAGCGACATTGCTACGATCATTTGGAAGCTCGTCAACTTCAGGTGGGAAAGCATCCGACAGGACGCTTTTCCCACCGAGCTACGGCGGAGTATTCGGTGAAAATGAGAGCAATCTTCAAGATCTGATGAATTCATTCACCACCGGAAGCTCAGCAGGCGGGCTCTTCGGTGGCGGAATGAGCTCATTCGGTACATTCGACGGCGGAAATAATAGACCAAACAACATGGAAACATTGGAAGATCCAAAACTACAACAAAATCTAAGCTCAGTTAGCATGGGAGGAACAGATAGATTAACAAGAGACTTCCTAGGTGTTGGACAAATTGTAAGAACGGAGGAGGAGGAGGAGGCGGCGGTGGCGGCGGTTATTCGCAACGAGAACATAAACAACCGCCGCAAGGGATCGTTATGGAGGGAAATGAGAGCAATTCAGCTGCATCAAGCCAAGCATTTGGTGGTGGAGGAAATGGAAACTACCAGTGAAGAAGAAGAAGAAGAAGAACAAAGTACAGACAGAAACAGATATTATAAATGCAACAAATCTCTCCAAGCTACCAAGCTGCTTAAGTTCAGTGATCTCCACAAATATCAGGTAGTTTTTTTTTTCTTTTTTTTTCTT

Coding sequence (CDS)

ATGTCATCTCTTCAAGATATTCCCAATATAACCCAATCCGATGTCCTCCGCCTTGGCGGCGGAGGACGAACCGGGCAGTTTAATCATCTTCTTCCTCCGTCTATCGGCTCGTCGTTTCGACCACCACCGCAACAAGCAATGCCGTCTTCGGCTGCGGCTGCGGCGTTCTTCTTGAATGATCAAACTAGCCAGAATAGCTTCCATGAGGATCATGGAAGTCAATCTCAACAAGGGTTGTTTGGAAACAAGGCGTTTCATGGATTAATGCAATTTTCTGATATGCAAAGTCATACGAGTAATAGTAACAACCCTTCCTCAAATCTCTTCAATTTGGGGTTCATTTCGAACCCGACTGGTGATAGTACGACGAATATGAACAACAACAACAACAACACCAACAGTAATAATACGAGTAATAGCAACAACAACAGCAACAGCAACAACAACAATCTTCAATCGTCTTTGCTTAATCAATTCAATGGCACGAACAATGGCAACAATGAAGGTGGTGCATCAAACATTTTCTCAATGATGGGCGATCAAATGAATTCAGGTGCAGTCCCGTCTCTCTATAGCAACACGACGGGAGTCGGCGGTAGCGGTACGAGCGGAGCAATTCCACACATGTCAGCAACGGCGCTTCTCCAAAAGGCAGCTCAATTAGGCTCAACAACGTCAAGTAGCAACACAACAGCGACATTGCTACGATCATTTGGAAGCTCGTCAACTTCAGGTGGGAAAGCATCCGACAGGACGCTTTTCCCACCGAGCTACGGCGGAGTATTCGGTGAAAATGAGAGCAATCTTCAAGATCTGATGAATTCATTCACCACCGGAAGCTCAGCAGGCGGGCTCTTCGGTGGCGGAATGAGCTCATTCGGTACATTCGACGGCGGAAATAATAGACCAAACAACATGGAAACATTGGAAGATCCAAAACTACAACAAAATCTAAGCTCAGTTAGCATGGGAGGAACAGATAGATTAACAAGAGACTTCCTAGGTGTTGGACAAATTGTAAGAACGGAGGAGGAGGAGGAGGCGGCGGTGGCGGCGGTTATTCGCAACGAGAACATAAACAACCGCCGCAAGGGATCGTTATGGAGGGAAATGAGAGCAATTCAGCTGCATCAAGCCAAGCATTTGGTGGTGGAGGAAATGGAAACTACCAGTGAAGAAGAAGAAGAAGAAGAACAAAGTACAGACAGAAACAGATATTATAAATGCAACAAATCTCTCCAAGCTACCAAGCTGCTTAAGTTCAGTGATCTCCACAAATATCAGGTAGTTTTTTTTTTCTTTTTTTTTCTT

Protein sequence

MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLNDQTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGDSTTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGDQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGSSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGNNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRTEEEEEAAVAAVIRNENINNRRKGSLWREMRAIQLHQAKHLVVEEMETTSEEEEEEEQSTDRNRYYKCNKSLQATKLLKFSDLHKYQVVFFFFFFL

Homology

[Close]

BLAST of Carg21197 vs. NCBI nr
Match: KAG7012699.1 (Protein indeterminate-domain 5, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 794.7 bits (2051), Expect = 4.1e-226
Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0


Query: 1   MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 60
           MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND
Sbjct: 1   MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 60

Query: 61  QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 120
           QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD
Sbjct: 61  QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 120

Query: 121 STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD 180
           STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD
Sbjct: 121 STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD 180

Query: 181 QMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS 240
           QMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS
Sbjct: 181 QMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS 240

Query: 241 SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN 300
           SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN
Sbjct: 241 SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN 300

Query: 301 NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRTEEEEEAAVAAVIRNENIN 360
           NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRTEEEEEAAVAAVIRNENIN
Sbjct: 301 NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRTEEEEEAAVAAVIRNENIN 360

Query: 361 NRRKGSLWREMRAIQLHQAKHLVVEEMETTSEEEEEEEQSTDRNRYYKCNKSLQATKLLK 420
           NRRKGSLWREMRAIQLHQAKHLVVEEMETTSEEEEEEEQSTDRNRYYKCNKSLQATKLLK
Sbjct: 361 NRRKGSLWREMRAIQLHQAKHLVVEEMETTSEEEEEEEQSTDRNRYYKCNKSLQATKLLK 420

Query: 421 FSDLHKYQVVFFFFFFL 438
           FSDLHKYQVVFFFFFFL
Sbjct: 421 FSDLHKYQVVFFFFFFL 437

[Close]

BLAST of Carg21197 vs. NCBI nr
Match: KAG6573617.1 (Protein indeterminate-domain 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 715.3 bits (1845), Expect = 3.2e-202
Identity = 405/435 (93.10%), Postives = 406/435 (93.33%), Query Frame = 0


Query: 1   MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 60
           MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND
Sbjct: 240 MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 299

Query: 61  QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 120
           QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD
Sbjct: 300 QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 359

Query: 121 STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD 180
           STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD
Sbjct: 360 STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD 419

Query: 181 QMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS 240
           QMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS
Sbjct: 420 QMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS 479

Query: 241 SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN 300
           SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN
Sbjct: 480 SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN 539

Query: 301 NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRTEEEEEAAVAAVIRNENIN 360
           NRPNNMETLEDPKLQQNLSS                       EEEEAAVAAVIRNENIN
Sbjct: 540 NRPNNMETLEDPKLQQNLSS-----------------------EEEEAAVAAVIRNENIN 599

Query: 361 NRRKGSLWREMRAIQLHQAKHLVVEEMETTSEEEEEEEQSTDRNRYYKCNKSLQATKLLK 420
           NRRKGSLWREMRAIQLHQAKHLVVEEMETTS EEEEEEQSTDRNRYYKCNKSLQATKLLK
Sbjct: 600 NRRKGSLWREMRAIQLHQAKHLVVEEMETTS-EEEEEEQSTDRNRYYKCNKSLQATKLLK 650

Query: 421 FSDLHKYQVVFFFFF 436
           FSDLHKYQ +    F
Sbjct: 660 FSDLHKYQYLIVSMF 650

[Close]

BLAST of Carg21197 vs. NCBI nr
Match: XP_022945583.1 (protein indeterminate-domain 5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 611.3 bits (1575), Expect = 6.5e-171
Identity = 339/342 (99.12%), Postives = 340/342 (99.42%), Query Frame = 0


Query: 1   MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 60
           MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND
Sbjct: 232 MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 291

Query: 61  QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 120
           QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD
Sbjct: 292 QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 351

Query: 121 STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD 180
           STTNM NNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD
Sbjct: 352 STTNM-NNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD 411

Query: 181 QMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS 240
           QMNSGAVPSLYSNTTGVGGSGTSGAI HMSATALLQKAAQLGSTTSSSNTTATLLRSFGS
Sbjct: 412 QMNSGAVPSLYSNTTGVGGSGTSGAIAHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS 471

Query: 241 SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN 300
           SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN
Sbjct: 472 SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN 531

Query: 301 NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRT 343
           NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVR+
Sbjct: 532 NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRS 572

[Close]

BLAST of Carg21197 vs. NCBI nr
Match: XP_023541938.1 (protein indeterminate-domain 5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 607.1 bits (1564), Expect = 1.2e-169
Identity = 338/343 (98.54%), Postives = 340/343 (99.13%), Query Frame = 0


Query: 1   MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 60
           MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND
Sbjct: 238 MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 297

Query: 61  QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 120
           QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD
Sbjct: 298 QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 357

Query: 121 STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNE-GGASNIFSMMG 180
           STTNM NNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNE GGASNIFSMMG
Sbjct: 358 STTNM-NNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGGASNIFSMMG 417

Query: 181 DQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFG 240
           DQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFG
Sbjct: 418 DQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFG 477

Query: 241 SSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGG 300
           SSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTG+S GGLFGGGMSSFGTFDGG
Sbjct: 478 SSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGNSTGGLFGGGMSSFGTFDGG 537

Query: 301 NNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRT 343
           NNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVR+
Sbjct: 538 NNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRS 579

[Close]

BLAST of Carg21197 vs. NCBI nr
Match: XP_022967062.1 (protein indeterminate-domain 5, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 602.8 bits (1553), Expect = 2.3e-168
Identity = 337/344 (97.97%), Postives = 340/344 (98.84%), Query Frame = 0


Query: 1   MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 60
           +SSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND
Sbjct: 234 ISSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 293

Query: 61  QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 120
           QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD
Sbjct: 294 QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 353

Query: 121 STTNMNNNNNNTNSNNTSNSNN--NSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMM 180
           STTNMNNNN N NSNNTSNSNN  NSNSNNNNLQSSLLNQF+GTNNGNNEGGASNIFSMM
Sbjct: 354 STTNMNNNNTN-NSNNTSNSNNNSNSNSNNNNLQSSLLNQFSGTNNGNNEGGASNIFSMM 413

Query: 181 GDQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSF 240
           GDQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSF
Sbjct: 414 GDQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSF 473

Query: 241 GSSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDG 300
           GSSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDG
Sbjct: 474 GSSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDG 533

Query: 301 GNNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRT 343
           GNNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVR+
Sbjct: 534 GNNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRS 576

[Close]

BLAST of Carg21197 vs. ExPASy Swiss-Prot
Match: Q9ZUL3 (Protein indeterminate-domain 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IDD5 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.4e-13
Identity = 114/338 (33.73%), Postives = 164/338 (48.52%), Query Frame = 0


Query: 14  DVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLNDQTSQNSFHEDHGS 73
           DVLRLG GG  G          G++ R         +A A+ +F+ +Q       +DH  
Sbjct: 262 DVLRLGSGGGGG----------GAASRSSSDLI---AANASGYFMQEQNPSFHDQQDHHH 321

Query: 74  QSQQGLF--GNKAFHGLMQFSD--MQSHTSNSNNPSSNLFNLGFISNPTGDSTTNMNNNN 133
             QQG     N      M F    MQ    N N+  SN+FNL F+S            NN
Sbjct: 322 HHQQGFLAGNNNIKQSPMSFQQNLMQFSHDNHNSAPSNVFNLSFLS-----------GNN 381

Query: 134 NNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTN--NGNNEGGAS---NIFSMMGDQMNS 193
             T++ +  N+   +  ++ NL  S  N ++G N   G  EG      N      D+++S
Sbjct: 382 GVTSATSNPNAAAAAAVSSGNLMIS--NHYDGENAVGGGGEGSTGLFPNNLMSSADRISS 441

Query: 194 GAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGSSSTS 253
           G+VPSL+S++       +  + PHMSATALLQKAAQ+GST+S++N         GS++ +
Sbjct: 442 GSVPSLFSSS-----MQSPNSAPHMSATALLQKAAQMGSTSSNNNN--------GSNTNN 501

Query: 254 GGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGNNRPN 313
              AS  ++      G++GENESNLQDLMNSF+   + G +  G  S FG++ G N    
Sbjct: 502 NNNAS--SILRSFGSGIYGENESNLQDLMNSFSNPGATGNV-NGVDSPFGSYGGVN---- 538

Query: 314 NMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRT 343
                      + LS+        +TRDFLGVGQIV++
Sbjct: 562 -----------KGLSA----DKQSMTRDFLGVGQIVKS 538

[Close]

BLAST of Carg21197 vs. ExPASy TrEMBL
Match: A0A6J1G1A8 (protein indeterminate-domain 5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111449777 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 3.1e-171
Identity = 339/342 (99.12%), Postives = 340/342 (99.42%), Query Frame = 0


Query: 1   MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 60
           MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND
Sbjct: 232 MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 291

Query: 61  QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 120
           QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD
Sbjct: 292 QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 351

Query: 121 STTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD 180
           STTNM NNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD
Sbjct: 352 STTNM-NNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMMGD 411

Query: 181 QMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS 240
           QMNSGAVPSLYSNTTGVGGSGTSGAI HMSATALLQKAAQLGSTTSSSNTTATLLRSFGS
Sbjct: 412 QMNSGAVPSLYSNTTGVGGSGTSGAIAHMSATALLQKAAQLGSTTSSSNTTATLLRSFGS 471

Query: 241 SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN 300
           SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN
Sbjct: 472 SSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGN 531

Query: 301 NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRT 343
           NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVR+
Sbjct: 532 NRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRS 572

[Close]

BLAST of Carg21197 vs. ExPASy TrEMBL
Match: A0A6J1HPQ0 (protein indeterminate-domain 5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111466576 PE=3 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 1.1e-168
Identity = 337/344 (97.97%), Postives = 340/344 (98.84%), Query Frame = 0


Query: 1   MSSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 60
           +SSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND
Sbjct: 234 ISSLQDIPNITQSDVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLND 293

Query: 61  QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 120
           QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD
Sbjct: 294 QTSQNSFHEDHGSQSQQGLFGNKAFHGLMQFSDMQSHTSNSNNPSSNLFNLGFISNPTGD 353

Query: 121 STTNMNNNNNNTNSNNTSNSNN--NSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIFSMM 180
           STTNMNNNN N NSNNTSNSNN  NSNSNNNNLQSSLLNQF+GTNNGNNEGGASNIFSMM
Sbjct: 354 STTNMNNNNTN-NSNNTSNSNNNSNSNSNNNNLQSSLLNQFSGTNNGNNEGGASNIFSMM 413

Query: 181 GDQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSF 240
           GDQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSF
Sbjct: 414 GDQMNSGAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSF 473

Query: 241 GSSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDG 300
           GSSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDG
Sbjct: 474 GSSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDG 533

Query: 301 GNNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRT 343
           GNNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVR+
Sbjct: 534 GNNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRS 576

[Close]

BLAST of Carg21197 vs. ExPASy TrEMBL
Match: A0A6J1E1A5 (protein indeterminate-domain 5, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111025024 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 1.5e-120
Identity = 269/356 (75.56%), Postives = 300/356 (84.27%), Query Frame = 0


Query: 1   MSSLQDIPNITQS--DVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFL 60
           +SSLQD PNI+QS  DVLRL GG R GQF+HLLPPSIGSSFR PPQQAMPSS+++AAFFL
Sbjct: 235 LSSLQDHPNISQSAHDVLRL-GGARAGQFSHLLPPSIGSSFR-PPQQAMPSSSSSAAFFL 294

Query: 61  NDQTSQNSFHEDHGSQSQQGLFGNKAFHGLMQF-SDMQSHTSNSNNP---SSNLFNLGFI 120
            DQT+QNSFHEDH SQSQQGLFGNK FHGLMQF SD+QSHTS++NNP   ++NLFNLGFI
Sbjct: 295 TDQTNQNSFHEDHQSQSQQGLFGNKGFHGLMQFPSDIQSHTSSNNNPATTATNLFNLGFI 354

Query: 121 SNPTGDSTTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNI 180
           SNPTGD        NNNTNS        NS++NNNNLQSSLLNQF+G NNG+NEGGA+NI
Sbjct: 355 SNPTGD--------NNNTNS--------NSSNNNNNLQSSLLNQFSGGNNGSNEGGAANI 414

Query: 181 FS--MMGD-QMNSGAVPSLYSNTTGVG---GSGTSGAIPHMSATALLQKAAQLGSTTSSS 240
           FS  +MGD Q++SGAVPSLYSN TGV      G+ G +PHMSATALLQKAAQLGSTTSSS
Sbjct: 415 FSVNIMGDHQISSGAVPSLYSNATGVSVGVAGGSGGGMPHMSATALLQKAAQLGSTTSSS 474

Query: 241 NTTATLLRSFGSSSTSGGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLF-- 300
           NTTATLLR+FGSSS+SGGK SDR LFPPSYGGVFGENE+NLQDLMNSF +G SA G+F  
Sbjct: 475 NTTATLLRTFGSSSSSGGKPSDRMLFPPSYGGVFGENENNLQDLMNSFASGGSASGIFGA 534

Query: 301 GGGMSSFGTFDGGNNRPNNMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRT 343
           G GM+SFG FD G NR  NMETLEDPKLQQNL++VSMGGTDRLTRDFLGVGQIVR+
Sbjct: 535 GNGMNSFGGFDSGGNRTTNMETLEDPKLQQNLTAVSMGGTDRLTRDFLGVGQIVRS 572

[Close]

BLAST of Carg21197 vs. ExPASy TrEMBL
Match: A0A0A0KMB9 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G270900 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 1.6e-111
Identity = 272/354 (76.84%), Postives = 295/354 (83.33%), Query Frame = 0


Query: 1   MSSLQDIPNITQS--DVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFL 60
           MSSLQD  NITQS  DVLRL GGGRTGQF HLLPPSIGSSFRPPPQQAMPSS  AA F L
Sbjct: 241 MSSLQDHSNITQSPHDVLRL-GGGRTGQFTHLLPPSIGSSFRPPPQQAMPSS-NAAFFGL 300

Query: 61  NDQTSQNSFHED-HGSQSQQGLFGNKAFHGLMQF-SDMQSHTSNSNNPSSNLFNLGFISN 120
           +DQT+QNSFHED H SQSQQGLFGNK FHGLMQF SD+Q+H +N+NN +SNLFNL FISN
Sbjct: 301 SDQTNQNSFHEDHHQSQSQQGLFGNKPFHGLMQFPSDIQTHANNNNNSASNLFNLSFISN 360

Query: 121 PTGDSTTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIF- 180
           PTGD+T+NMNNNN+     NT+NSN++SN NNNNL SSLLNQFNGTNNGNN+G ASNIF 
Sbjct: 361 PTGDNTSNMNNNND----TNTNNSNSSSN-NNNNLPSSLLNQFNGTNNGNNDGPASNIFA 420

Query: 181 -SMMGDQMNSGAVPSLYSNTTGVG-GSGTS--GAIPHMSATALLQKAAQLGSTTSSSNTT 240
            ++MGDQ+NS AVPSLYSNT   G  SGTS  GAIPHMSATALLQKAAQLGSTTSSSNTT
Sbjct: 421 VNIMGDQINSAAVPSLYSNTAPGGCSSGTSGGGAIPHMSATALLQKAAQLGSTTSSSNTT 480

Query: 241 ATLLRSFGSSSTSGGKASDRTLFPPSYGG-VFGENESNLQDLMNSFTTGSSAGGLFGGGM 300
           ATLLR+FGSSSTS GKASDRTLFPPSYGG VFGENESNLQDLMNSF   SS  G+FG   
Sbjct: 481 ATLLRTFGSSSTSSGKASDRTLFPPSYGGVVFGENESNLQDLMNSFANASSGSGMFG--- 540

Query: 301 SSFGTFDGGNNRPNNMETLEDP-KLQQNLSSVSM-GGTDRLTRDFLGVGQIVRT 343
            SFG           +E+LEDP KLQQNLS+VSM GGTDRLTRDFLGVGQIVR+
Sbjct: 541 -SFG-----------VESLEDPTKLQQNLSTVSMGGGTDRLTRDFLGVGQIVRS 572

[Close]

BLAST of Carg21197 vs. ExPASy TrEMBL
Match: A0A1S3CCG7 (protein indeterminate-domain 5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499101 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 6.9e-110
Identity = 269/354 (75.99%), Postives = 294/354 (83.05%), Query Frame = 0


Query: 1   MSSLQDIPNITQS--DVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFL 60
           +SSLQD  NITQS  DVLRL GGGRTGQF HLLPPSIGSSFRPPPQQAMPSS  AA F L
Sbjct: 241 LSSLQDHSNITQSPHDVLRL-GGGRTGQFTHLLPPSIGSSFRPPPQQAMPSS-NAAFFGL 300

Query: 61  NDQTSQNSFHED-HGSQSQQGLFGNKAFHGLMQF-SDMQSHTSNSNNPSSNLFNLGFISN 120
           +DQT+QNSFHED H SQSQQGLFGNK FHGLMQF SD+Q+H +N++N +SNLFNL FISN
Sbjct: 301 SDQTNQNSFHEDHHQSQSQQGLFGNKPFHGLMQFPSDIQTHANNNSNSASNLFNLSFISN 360

Query: 121 PTGDSTTNMNNNNNNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTNNGNNEGGASNIF- 180
           PTGD+T+NMNNNN+     NT+NSN++SN NNNNL SSLLNQFNGTNNGNN+G ASNIF 
Sbjct: 361 PTGDNTSNMNNNND----TNTNNSNSSSN-NNNNLPSSLLNQFNGTNNGNNDGPASNIFA 420

Query: 181 -SMMGDQMNSGAVPSLYSNTTGVG-GSGTS--GAIPHMSATALLQKAAQLGSTTSSSNTT 240
            ++MGDQ+NS AVPSLYSNT   G  SGTS  GAIPHMSATALLQKAAQLGSTTSSSNTT
Sbjct: 421 VNIMGDQINSAAVPSLYSNTAPGGCSSGTSGGGAIPHMSATALLQKAAQLGSTTSSSNTT 480

Query: 241 ATLLRSFGSSSTSGGKASDRTLFPPSYGG-VFGENESNLQDLMNSFTTGSSAGGLFGGGM 300
           ATLLR+FGSSSTS GKASDRTLFPPSYGG VF ENESNLQDLMNSF   SS  G+FG   
Sbjct: 481 ATLLRTFGSSSTSSGKASDRTLFPPSYGGVVFSENESNLQDLMNSFANASSGSGMFG--- 540

Query: 301 SSFGTFDGGNNRPNNMETLEDP-KLQQNLSSVSM-GGTDRLTRDFLGVGQIVRT 343
            SFG           +E+LEDP KLQQNLS+VSM GGTDRLTRDFLGVGQIVR+
Sbjct: 541 -SFG-----------VESLEDPTKLQQNLSTVSMGGGTDRLTRDFLGVGQIVRS 572

[Close]

BLAST of Carg21197 vs. TAIR 10
Match: AT2G02070.1 (indeterminate(ID)-domain 5 )

HSP 1 Score: 77.4 bits (189), Expect = 3.2e-14
Identity = 114/338 (33.73%), Postives = 164/338 (48.52%), Query Frame = 0


Query: 14  DVLRLGGGGRTGQFNHLLPPSIGSSFRPPPQQAMPSSAAAAAFFLNDQTSQNSFHEDHGS 73
           DVLRLG GG  G          G++ R         +A A+ +F+ +Q       +DH  
Sbjct: 262 DVLRLGSGGGGG----------GAASRSSSDLI---AANASGYFMQEQNPSFHDQQDHHH 321

Query: 74  QSQQGLF--GNKAFHGLMQFSD--MQSHTSNSNNPSSNLFNLGFISNPTGDSTTNMNNNN 133
             QQG     N      M F    MQ    N N+  SN+FNL F+S            NN
Sbjct: 322 HHQQGFLAGNNNIKQSPMSFQQNLMQFSHDNHNSAPSNVFNLSFLS-----------GNN 381

Query: 134 NNTNSNNTSNSNNNSNSNNNNLQSSLLNQFNGTN--NGNNEGGAS---NIFSMMGDQMNS 193
             T++ +  N+   +  ++ NL  S  N ++G N   G  EG      N      D+++S
Sbjct: 382 GVTSATSNPNAAAAAAVSSGNLMIS--NHYDGENAVGGGGEGSTGLFPNNLMSSADRISS 441

Query: 194 GAVPSLYSNTTGVGGSGTSGAIPHMSATALLQKAAQLGSTTSSSNTTATLLRSFGSSSTS 253
           G+VPSL+S++       +  + PHMSATALLQKAAQ+GST+S++N         GS++ +
Sbjct: 442 GSVPSLFSSS-----MQSPNSAPHMSATALLQKAAQMGSTSSNNNN--------GSNTNN 501

Query: 254 GGKASDRTLFPPSYGGVFGENESNLQDLMNSFTTGSSAGGLFGGGMSSFGTFDGGNNRPN 313
              AS  ++      G++GENESNLQDLMNSF+   + G +  G  S FG++ G N    
Sbjct: 502 NNNAS--SILRSFGSGIYGENESNLQDLMNSFSNPGATGNV-NGVDSPFGSYGGVN---- 538

Query: 314 NMETLEDPKLQQNLSSVSMGGTDRLTRDFLGVGQIVRT 343
                      + LS+        +TRDFLGVGQIV++
Sbjct: 562 -----------KGLSA----DKQSMTRDFLGVGQIVKS 538

The following BLAST results are available for this feature:

BLAST of Carg21197 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012699.1	4.1e-226	100.00	Protein indeterminate-domain 5, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
KAG6573617.1	3.2e-202	93.10	Protein indeterminate-domain 6, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_022945583.1	6.5e-171	99.12	protein indeterminate-domain 5, chloroplastic-like [Cucurbita moschata]	[more]
XP_023541938.1	1.2e-169	98.54	protein indeterminate-domain 5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967062.1	2.3e-168	97.97	protein indeterminate-domain 5, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Carg21197 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUL3	4.4e-13	33.73	Protein indeterminate-domain 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg21197 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G1A8	3.1e-171	99.12	protein indeterminate-domain 5, chloroplastic-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1HPQ0	1.1e-168	97.97	protein indeterminate-domain 5, chloroplastic-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1E1A5	1.5e-120	75.56	protein indeterminate-domain 5, chloroplastic-like OS=Momordica charantia OX=367...	[more]
A0A0A0KMB9	1.6e-111	76.84	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G270900 P...	[more]
A0A1S3CCG7	6.9e-110	75.99	protein indeterminate-domain 5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Carg21197 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02070.1	3.2e-14	33.73	indeterminate(ID)-domain 5	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 384..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..50
None	No IPR available	PANTHER	PTHR10593:SF186	ZINC FINGER PROTEIN, PUTATIVE-RELATED	coord: 64..345
None	No IPR available	PANTHER	PTHR10593	SERINE/THREONINE-PROTEIN KINASE RIO	coord: 64..345
IPR023828	Peptidase S8, subtilisin, Ser-active site	PROSITE	PS00138	SUBTILASE_SER	coord: 201..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21197-RA	Carg21197-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008236	serine-type peptidase activity