Carg21185 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg21185
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	trihelix transcription factor ASR3-like
Location	Carg_Chr01: 11110858 .. 11112585 (-)
RNA-Seq Expression	Carg21185
Synteny	Carg21185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGGAGGACGGCAAACGTGGAACGGAGGTTTCAGGTTCTCGTCGGACGCGGTCTCGTATAGCGCCGGATTGGACAGCGGCGGATTGCCTCGTTCTTGTTAATGTGATTGCAGCTGTGGAGGCCGATTGTTGGAAAGCTTTGTCTAGCTTTCAGAAATGGAAAATTGTTGCAGAGAACTGCACGTCTTTGGATGTGGCTCGGAACTCGAATCAGTGCAGGAGGAAGTGGGACTGTTTGCTGATTGAACATGATGTTATCAAGCAATGGGAGTTAGAGATGCCGGATGATGATTCGTATTGGTGTTTGGAAAGTGGAAGGAGAAAGGAATTGGGACTTCCTGATAACTTTGACGAGGAGGTGTTCAAAGCAATTGATAATGTTGTATCGATGAGGGCGAATCAGTCGGATACGGAGCCTGATAGCGATCCTGAGGCTGCGGTTGAGAAGGTAGATGAAGCTGCAGAGCCTGGTATGGTTCTTTGTTTCCTAGAGTGCTTATTGATCACATTTCTATGGTATCAAGTTTTCATGTGAATTTGTACACTTTTAGAGTTCCTTTGAATACACTTGATACCATCGTTTTTTGCTTCACTTAATGACTTAAAAGCCTTTGTTTCCTGGCCTTGGGCGAGCAAGGCATTCCCTGAGATTAGCGGAATGGGGCATGAACATAATTGCAAGGACTAGCCTTGATAGTTTGTTTATAAGAAAGTAGTTTTTTGCTTCTTGATCAGTAATGGAGGAAATTTTCTGTAACTGCTTCAAACCTACTACTAGCAGATATTGTCCTTTTAGGGTTGGCTTTTCCTTTAAGGTTTCTAAAACGCATCTCTTAGGGAGAGATTTTCACACGCCGATAAAAAATGCTTCGTTCTCCTCTCCAACCGATGTGAGATCTCACAATCCACCTTCCTTCAAGACCCAACGTCTTCACTGACACTCTTTGTTCTCCTCCCCAATCGATGTGAGATCTCACAATCTACCTCCTTCGGGGCCAGCATCCTCGCTGACATTTGTTCCCTTCTCCAATCTACCTCCTTGAGTAGCCATTTCAGGATCTAGGTCTTTTTGGTTCTTTTAATTCATTCGGTGAATTTTGAACTTAGTGGTCTGCTAACTTGTATCATTACAAGGCCTGATGAGACAGGATTGCCTTTTAGAGTTCTTTTGACAGCCTAATTTTTTTTCATGGAGATGAAATACAGCTGTAACTGCATTTTCCTACGGCTTAATTGTGAAATGTGGTTAAAGAGTGAGATGGATCTTATAATTCCTGTCTTCAAATTCCTTCAATAATATTGGTTTGTTCTTCTTTCTGGCTTTGTCGTGTTAGGCCCTAAAAGGCAAAGACGTTGTTCAATGTCTATAAGAAATCGATCTCTTGAGAAATCAGTAAAATGTGAAGAAGAAGACGAAGAACCTCCGGTGAGCTCTCCGGAAGTAGAGCGTCGTGGATGCTACATCAAAAGCCATGGAGAAAAGGCGACCGATAGCACCGAACCCGAAGAGCAAACGATGGCGAAGAAATTGCTTGAAACTGCAGAAAAAGTTCAAGCAATTGTGTCTGAGAATGCAGAATATGCAACGTCCGACGAAAAAAACGACAACTACAATGTCCGAACTAATTCCATTAGGCGTCAAGGGAGCAAGCTTATCAAATGTCTTGAAGATTTTCTCAACACCATTAATGATCTCCATAGCCTGCTCGAAGATCAAGAGTAA

mRNA sequence

ATGAAGGAGGAGGACGGCAAACGTGGAACGGAGGTTTCAGGTTCTCGTCGGACGCGGTCTCGTATAGCGCCGGATTGGACAGCGGCGGATTGCCTCGTTCTTGTTAATGTGATTGCAGCTGTGGAGGCCGATTGTTGGAAAGCTTTGTCTAGCTTTCAGAAATGGAAAATTGTTGCAGAGAACTGCACGTCTTTGGATGTGGCTCGGAACTCGAATCAGTGCAGGAGGAAGTGGGACTGTTTGCTGATTGAACATGATGTTATCAAGCAATGGGAGTTAGAGATGCCGGATGATGATTCGTATTGGTGTTTGGAAAGTGGAAGGAGAAAGGAATTGGGACTTCCTGATAACTTTGACGAGGAGGTGTTCAAAGCAATTGATAATGTTGTATCGATGAGGGCGAATCAGTCGGATACGGAGCCTGATAGCGATCCTGAGGCTGCGGTTGAGAAGGTAGATGAAGCTGCAGAGCCTGGCCCTAAAAGGCAAAGACGTTGTTCAATGTCTATAAGAAATCGATCTCTTGAGAAATCAGTAAAATGTGAAGAAGAAGACGAAGAACCTCCGGTGAGCTCTCCGGAAGTAGAGCGTCGTGGATGCTACATCAAAAGCCATGGAGAAAAGGCGACCGATAGCACCGAACCCGAAGAGCAAACGATGGCGAAGAAATTGCTTGAAACTGCAGAAAAAGTTCAAGCAATTGTGTCTGAGAATGCAGAATATGCAACGTCCGACGAAAAAAACGACAACTACAATGTCCGAACTAATTCCATTAGGCGTCAAGGGAGCAAGCTTATCAAATGTCTTGAAGATTTTCTCAACACCATTAATGATCTCCATAGCCTGCTCGAAGATCAAGAGTAA

Coding sequence (CDS)

ATGAAGGAGGAGGACGGCAAACGTGGAACGGAGGTTTCAGGTTCTCGTCGGACGCGGTCTCGTATAGCGCCGGATTGGACAGCGGCGGATTGCCTCGTTCTTGTTAATGTGATTGCAGCTGTGGAGGCCGATTGTTGGAAAGCTTTGTCTAGCTTTCAGAAATGGAAAATTGTTGCAGAGAACTGCACGTCTTTGGATGTGGCTCGGAACTCGAATCAGTGCAGGAGGAAGTGGGACTGTTTGCTGATTGAACATGATGTTATCAAGCAATGGGAGTTAGAGATGCCGGATGATGATTCGTATTGGTGTTTGGAAAGTGGAAGGAGAAAGGAATTGGGACTTCCTGATAACTTTGACGAGGAGGTGTTCAAAGCAATTGATAATGTTGTATCGATGAGGGCGAATCAGTCGGATACGGAGCCTGATAGCGATCCTGAGGCTGCGGTTGAGAAGGTAGATGAAGCTGCAGAGCCTGGCCCTAAAAGGCAAAGACGTTGTTCAATGTCTATAAGAAATCGATCTCTTGAGAAATCAGTAAAATGTGAAGAAGAAGACGAAGAACCTCCGGTGAGCTCTCCGGAAGTAGAGCGTCGTGGATGCTACATCAAAAGCCATGGAGAAAAGGCGACCGATAGCACCGAACCCGAAGAGCAAACGATGGCGAAGAAATTGCTTGAAACTGCAGAAAAAGTTCAAGCAATTGTGTCTGAGAATGCAGAATATGCAACGTCCGACGAAAAAAACGACAACTACAATGTCCGAACTAATTCCATTAGGCGTCAAGGGAGCAAGCTTATCAAATGTCTTGAAGATTTTCTCAACACCATTAATGATCTCCATAGCCTGCTCGAAGATCAAGAGTAA

Protein sequence

MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAENCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDEEVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVKCEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAEYATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE

Homology

[Close]

BLAST of Carg21185 vs. NCBI nr
Match: KAG7037576.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 569.7 bits (1467), Expect = 1.4e-158
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE
Sbjct: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE
Sbjct: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180

Query: 181 CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE 240
           CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE
Sbjct: 181 CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE 240

Query: 241 YATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           YATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE
Sbjct: 241 YATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 287

[Close]

BLAST of Carg21185 vs. NCBI nr
Match: KAG6608224.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 562.4 bits (1448), Expect = 2.3e-156
Identity = 282/287 (98.26%), Postives = 284/287 (98.95%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKI+AE
Sbjct: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIIAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE
Sbjct: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMS RN+SLEKSV 
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQSLEKSVN 180

Query: 181 CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE 240
           CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTM KKLLETAEKVQAIVSENAE
Sbjct: 181 CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMVKKLLETAEKVQAIVSENAE 240

Query: 241 YATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           YATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE
Sbjct: 241 YATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 287

[Close]

BLAST of Carg21185 vs. NCBI nr
Match: XP_022941124.1 (trihelix transcription factor ASR3-like [Cucurbita moschata])

HSP 1 Score: 561.2 bits (1445), Expect = 5.1e-156
Identity = 283/287 (98.61%), Postives = 284/287 (98.95%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE
Sbjct: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE
Sbjct: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMS RN+SLEKSVK
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQSLEKSVK 180

Query: 181 CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE 240
           CEEEDEEP VSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE
Sbjct: 181 CEEEDEEPQVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE 240

Query: 241 YATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           YATSDEKNDNYNVRTNSIR QGSKLIKCLEDFLNTINDLHSLLEDQE
Sbjct: 241 YATSDEKNDNYNVRTNSIRHQGSKLIKCLEDFLNTINDLHSLLEDQE 287

[Close]

BLAST of Carg21185 vs. NCBI nr
Match: KAG6608217.1 (Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 557.8 bits (1436), Expect = 5.6e-155
Identity = 282/288 (97.92%), Postives = 284/288 (98.61%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKI+AE
Sbjct: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIIAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE
Sbjct: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMS RN+SLEKSV 
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQSLEKSVN 180

Query: 181 CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE 240
           CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTM KKLLETAEKVQAIVSENAE
Sbjct: 181 CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMVKKLLETAEKVQAIVSENAE 240

Query: 241 YATSDE-KNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           YATSDE KNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE
Sbjct: 241 YATSDEKKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288

[Close]

BLAST of Carg21185 vs. NCBI nr
Match: XP_023524323.1 (trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023524324.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023524325.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023524326.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 547.0 bits (1408), Expect = 9.9e-152
Identity = 279/290 (96.21%), Postives = 284/290 (97.93%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE
Sbjct: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           NCTSLDVARNSNQCRRKWDCLLIEHDVI+QWELEMPDDDSYWCLES RRKELGLPDNFDE
Sbjct: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIRQWELEMPDDDSYWCLESERRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           E+FKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMS RN++LEKSVK
Sbjct: 121 ELFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQALEKSVK 180

Query: 181 CE-EEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENA 240
           CE EE+EEPPVSSPEVERRGCYIKSHGEK TDSTEPEEQTMAKKLLETAEKVQAIVSENA
Sbjct: 181 CEGEEEEEPPVSSPEVERRGCYIKSHGEKTTDSTEPEEQTMAKKLLETAEKVQAIVSENA 240

Query: 241 EYATSDEK--NDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           EYATSDEK  NDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE
Sbjct: 241 EYATSDEKNDNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 290

[Close]

BLAST of Carg21185 vs. ExPASy TrEMBL
Match: A0A6J1FMB3 (trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC111446515 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.5e-156
Identity = 283/287 (98.61%), Postives = 284/287 (98.95%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE
Sbjct: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE
Sbjct: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMS RN+SLEKSVK
Sbjct: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQSLEKSVK 180

Query: 181 CEEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE 240
           CEEEDEEP VSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE
Sbjct: 181 CEEEDEEPQVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIVSENAE 240

Query: 241 YATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           YATSDEKNDNYNVRTNSIR QGSKLIKCLEDFLNTINDLHSLLEDQE
Sbjct: 241 YATSDEKNDNYNVRTNSIRHQGSKLIKCLEDFLNTINDLHSLLEDQE 287

[Close]

BLAST of Carg21185 vs. ExPASy TrEMBL
Match: A0A6J1J3M2 (trihelix transcription factor ASR3 OS=Cucurbita maxima OX=3661 GN=LOC111481039 PE=4 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 3.9e-146
Identity = 272/297 (91.58%), Postives = 279/297 (93.94%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MKEEDGKRGTEVSGSRRTRSRIAPDWTAA+CLVLVNVIAAVEADCWKALSSFQKWKIVAE
Sbjct: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAANCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE
Sbjct: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           E+FKAIDNVV MRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMS RN++LEKSVK
Sbjct: 121 ELFKAIDNVVLMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSTRNQALEKSVK 180

Query: 181 C--------EEEDEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQ 240
           C        EEE+EEP VSSPEVERRGCYIKSHGEKATD+TEPEEQTM KKLLETAEKVQ
Sbjct: 181 CEEEEEEEEEEEEEEPLVSSPEVERRGCYIKSHGEKATDNTEPEEQTMTKKLLETAEKVQ 240

Query: 241 AIVSENAEYATSDEK--NDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           AIVSENA+YA S EK  NDNYN RTNSIRRQGSKLIKCLEDFLNTINDLHSL EDQE
Sbjct: 241 AIVSENAKYAMSGEKNDNDNYNNRTNSIRRQGSKLIKCLEDFLNTINDLHSLPEDQE 297

[Close]

BLAST of Carg21185 vs. ExPASy TrEMBL
Match: A0A6J1CEU7 (trihelix transcription factor ASR3 OS=Momordica charantia OX=3673 GN=LOC111010559 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.4e-119
Identity = 226/289 (78.20%), Postives = 254/289 (87.89%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MK+EDG RG  VSGSRRTRS+IAPDWTAA+CLVLVNVIAAVEADC KALSS+QKWKIVAE
Sbjct: 1   MKQEDGNRGAGVSGSRRTRSQIAPDWTAAECLVLVNVIAAVEADCLKALSSYQKWKIVAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           NCTSLDVAR SNQCRRKWDCLLIEHDVIKQWELEMPDDDSYW LESGRRKELGLP+NFD+
Sbjct: 61  NCTSLDVARTSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWSLESGRRKELGLPENFDK 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           E+FKAIDNV +MRANQSDTEPDSDPEA VE +DE +EPGPKRQRR S+S R+++LEKS++
Sbjct: 121 ELFKAIDNVATMRANQSDTEPDSDPEAGVEMLDEISEPGPKRQRRRSISKRSQALEKSLE 180

Query: 181 CEEEDEE-PPVSSPEVERRGCYIKSHGEKATDSTE-PEEQTMAKKLLETAEKVQAIVSEN 240
           CEEEDEE PP++SPE E R C+IKS+GEK  DS E  EEQ M KKLLE  E++QAIVSEN
Sbjct: 181 CEEEDEEKPPLNSPEAEPRECFIKSNGEKQIDSLELEEEQMMTKKLLENVEQIQAIVSEN 240

Query: 241 AEYATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           AEYATSDEKN N+  R +S+RRQG+ LI+CL D LN INDLH L ED+E
Sbjct: 241 AEYATSDEKNTNH--RIDSVRRQGNTLIRCLGDILNAINDLHGLFEDRE 287

[Close]

BLAST of Carg21185 vs. ExPASy TrEMBL
Match: A0A6J1IN02 (trihelix transcription factor ASR3-like OS=Cucurbita maxima OX=3661 GN=LOC111476700 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 7.2e-116
Identity = 221/292 (75.68%), Postives = 250/292 (85.62%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MK+E+G RG+ VSGSRRTRS+IAP+WTAA+CLVLVNVI AVEADC KALSS+QKWKIVAE
Sbjct: 1   MKKENGNRGSGVSGSRRTRSQIAPEWTAAECLVLVNVIGAVEADCMKALSSYQKWKIVAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           +CT+L+VAR SNQCR+KW+CLLIEHDVI+QWEL MP+DDSYWCLESGRRKELGLPDNFDE
Sbjct: 61  DCTALNVARTSNQCRKKWECLLIEHDVIRQWELTMPEDDSYWCLESGRRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           E+FKAI NV SMRANQSDTEPD+DPEAAVE  DE +EPGPKRQRR SMS RN+ LEKS++
Sbjct: 121 ELFKAIYNVSSMRANQSDTEPDNDPEAAVENADEISEPGPKRQRRGSMSKRNQGLEKSLE 180

Query: 181 CEEEDEE-----PPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIV 240
           C+E++EE     P +SSPE + R CYIK++G KATD  EPEEQ M KKLLE AE VQ IV
Sbjct: 181 CKEDEEEEAEEQPLLSSPEADLRDCYIKNNGAKATDDIEPEEQMMVKKLLENAENVQEIV 240

Query: 241 SENAEYATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           SENAE  TSDEKND    +TN IRRQGSKLI+CL DFLNTINDL  LLED E
Sbjct: 241 SENAECVTSDEKND--KDQTNLIRRQGSKLIRCLGDFLNTINDLRDLLEDFE 290

[Close]

BLAST of Carg21185 vs. ExPASy TrEMBL
Match: A0A6J1FEH7 (trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC111443343 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 4.7e-115
Identity = 221/292 (75.68%), Postives = 250/292 (85.62%), Query Frame = 0


Query: 1   MKEEDGKRGTEVSGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAE 60
           MK+E+G RG+ VSGSRRTRS+IAP+WTAA+CLVLVNVI AVEADC KALSS+QKWKIVAE
Sbjct: 1   MKKENGNRGSGVSGSRRTRSQIAPEWTAAECLVLVNVIGAVEADCLKALSSYQKWKIVAE 60

Query: 61  NCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDDSYWCLESGRRKELGLPDNFDE 120
           +CT+L+VAR SNQCR+KW+CLLIEHDVIKQWEL MP+DDSYWCLESGRRKELGLPDNFDE
Sbjct: 61  DCTALNVARTSNQCRKKWECLLIEHDVIKQWELTMPEDDSYWCLESGRRKELGLPDNFDE 120

Query: 121 EVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAAEPGPKRQRRCSMSIRNRSLEKSVK 180
           E+FKAIDNV SMRANQSDTEPD+DPEAAVE  DE +EPGPKRQRR SMS RN+ LEKS++
Sbjct: 121 ELFKAIDNVSSMRANQSDTEPDNDPEAAVENADEISEPGPKRQRRGSMSKRNQGLEKSLE 180

Query: 181 CEEE-----DEEPPVSSPEVERRGCYIKSHGEKATDSTEPEEQTMAKKLLETAEKVQAIV 240
            +E+     +E+P +SSPE + R CYIK++G  ATD  EPEEQ M KKLLE AE VQ IV
Sbjct: 181 FKEDEEDEAEEQPLLSSPESDLRDCYIKNNGATATDDIEPEEQMMVKKLLENAENVQEIV 240

Query: 241 SENAEYATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           SENAE ATSDEKND    +TN IRRQGSKLI+CL DFLNTINDL  LLED E
Sbjct: 241 SENAECATSDEKND--KDQTNLIRRQGSKLIRCLGDFLNTINDLRDLLEDCE 290

[Close]

BLAST of Carg21185 vs. TAIR 10
Match: AT4G31270.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48
Identity = 119/293 (40.61%), Postives = 173/293 (59.04%), Query Frame = 0


Query: 13  SGSRRTRSRIAPDWTAADCLVLVNVIAAVEADCWKALSSFQKWKIVAENCTSLDVARNSN 72
           SGSRRTRS++AP+W   DCLVLVN IAAVEADC  ALSSFQKW ++ ENC +LDV+RN N
Sbjct: 6   SGSRRTRSQVAPEWAVKDCLVLVNEIAAVEADCSNALSSFQKWTMITENCNALDVSRNLN 65

Query: 73  QCRRKWDCLLIEHDVIKQWELEMPDDD-SYWCLESGRRKELGLPDNFDEEVFKAIDNVVS 132
           QCRRKWD L+ +++ IK+WE +      SYW L S +RK L LP + D E+F+AI+ VV 
Sbjct: 66  QCRRKWDSLMSDYNQIKKWESQYRGTGRSYWSLSSDKRKLLNLPGDIDIELFEAINAVVM 125

Query: 133 MRANQSDTEPDSDPEA--AVEKVDEAAEPGPKRQRRCSMSIRNRSLE--KSVKCEEEDEE 192
           ++  ++ TE DSDPEA   V+   E A  G KR R+ +M ++    E  ++ + +    E
Sbjct: 126 IQDEKAGTESDSDPEAQDVVDLSAELAFVGSKRSRQRTMVMKETKKEEPRTSRVQVNTRE 185

Query: 193 PPVSSPEVERRGCYIKSHGEK------ATDSTEPEE-------QTMAKKLLETAEKVQAI 252
            P+++    +     K+ GEK      +TD  E E        + M  KL    + + AI
Sbjct: 186 KPITTKATHQN----KTMGEKKPVEDMSTDEEEDETMNIEEDVEVMEAKLSYKIDLIHAI 245

Query: 253 VSENAEYATSDEKNDNYNVRTNSIRRQGSKLIKCLEDFLNTINDLHSLLEDQE 288
           V  N       +   + + +  S+R+QG +LI CL + ++T+N LH + ++ E
Sbjct: 246 VGRNLAKDNETKDGVSMDDKLKSVRQQGDELIGCLSEIVSTLNRLHEVPQEIE 294

[Close]

BLAST of Carg21185 vs. TAIR 10
Match: AT2G35640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-07
Identity = 39/143 (27.27%), Postives = 62/143 (43.36%), Query Frame = 0


Query: 25  DWTAADCLVLVNVIAAVEADCWKALSSFQK------------WKIVAENCTSLDVARNSN 84
           +WT ++ LVL   I A + D  + +   +K            WK + E C      RN N
Sbjct: 21  NWTVSETLVL---IEAKKMDDQRRVRRSEKQPEGRNKPAELRWKWIEEYCWRRGCYRNQN 80

Query: 85  QCRRKWDCLLIEHDVIKQWELEMPD-------DDSYWCLESGRRKELGLPDNFDEEVFKA 144
           QC  KWD L+ ++  I+++E    +         SYW ++   RKE  LP N   +++  
Sbjct: 81  QCNDKWDNLMRDYKKIREYERSRVESSFNTVTSSSYWKMDKTERKEKNLPSNMLPQIYDV 140

Query: 145 IDNVVSMRANQSDTEPDSDPEAA 149
           +  +V  +     T P S   AA
Sbjct: 141 LSELVDRK-----TLPSSSSAAA 155

[Close]

BLAST of Carg21185 vs. TAIR 10
Match: AT1G31310.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-06
Identity = 33/120 (27.50%), Postives = 51/120 (42.50%), Query Frame = 0


Query: 54  KWKIVAENCTSLDVARNSNQCRRKWDCLLIEHDVIKQWELEMPDDD-------------- 113
           +WK + + C      R+ NQC  KWD L+ ++  ++++E    +                
Sbjct: 63  RWKWIEDYCWRKGCMRSQNQCNDKWDNLMRDYKKVREYERRRVESSITAGESSSSSAPAG 122

Query: 114 ---SYWCLESGRRKELGLPDNFDEEVFKAIDNVVSMRANQSDTEPDSDPEAAVEKVDEAA 157
              SYW +E   RKE  LP N   + ++A+  VV     +S T P S    AV     AA
Sbjct: 123 ETASYWKMEKSERKERSLPSNMLPQTYQALFEVV-----ESKTLPSSTAVTAVTAAVAAA 177

The following BLAST results are available for this feature:

BLAST of Carg21185 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037576.1	1.4e-158	100.00	Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. argyr...	[more]
KAG6608224.1	2.3e-156	98.26	Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022941124.1	5.1e-156	98.61	trihelix transcription factor ASR3-like [Cucurbita moschata]	[more]
KAG6608217.1	5.6e-155	97.92	Trihelix transcription factor ASR3, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023524323.1	9.9e-152	96.21	trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_0235243...	[more]

BLAST of Carg21185 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg21185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMB3	2.5e-156	98.61	trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1J3M2	3.9e-146	91.58	trihelix transcription factor ASR3 OS=Cucurbita maxima OX=3661 GN=LOC111481039 P...	[more]
A0A6J1CEU7	1.4e-119	78.20	trihelix transcription factor ASR3 OS=Momordica charantia OX=3673 GN=LOC11101055...	[more]
A0A6J1IN02	7.2e-116	75.68	trihelix transcription factor ASR3-like OS=Cucurbita maxima OX=3661 GN=LOC111476...	[more]
A0A6J1FEH7	4.7e-115	75.68	trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of Carg21185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31270.1	2.2e-48	40.61	sequence-specific DNA binding transcription factors	[more]
AT2G35640.1	1.4e-07	27.27	Homeodomain-like superfamily protein	[more]
AT1G31310.1	2.1e-06	27.50	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 26..84 e-value: 5.9E-6 score: 28.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..199
None	No IPR available	PANTHER	PTHR33492:SF4	OS02G0174300 PROTEIN	coord: 7..285
None	No IPR available	PANTHER	PTHR33492	OSJNBA0043A12.37 PROTEIN-RELATED	coord: 7..285
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 26..82 score: 6.504352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21185-RA	Carg21185-RA	mRNA