Carg21177 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCCCGAAGCTTGCCGTCGTCAAAACCTCTCTGAAATTCCTTCTCTGCAGTTCTTCGTCTCTTTCCTCACTGGCACCACCCACCTCAAAAAACCCCTTTCAACAGCTCCTCCAATCCATGGCGGATTCCGGCGACCTCCCTTTGTGCGTCATCACTGATTACTTTCTTGGTTGGAACGCCAGCATTTGCCAAGACTTCCGCGTTCCAAGATTGGTCTTCCATGCCACCGTCGTTGTGCCATTTCTCATCACCAAAGCCATTATGGCCAATGCTGATAACACGGCTTCTGCTTCCTCTATCTCTACTCTTGTCCACCGGCTTCTGCCGAATCTGTCGTTTAATTTAACTGCCGCCGAATCTGTCGTTTAA ATGGCCTCCCCGAAGCTTGCCGTCGTCAAAACCTCTCTGAAATTCCTTCTCTGCAGTTCTTCGTCTCTTTCCTCACTGGCACCACCCACCTCAAAAAACCCCTTTCAACAGCTCCTCCAATCCATGGCGGATTCCGGCGACCTCCCTTTGTGCGTCATCACTGATTACTTTCTTGGTTGGAACGCCAGCATTTGCCAAGACTTCCGCGTTCCAAGATTGGTCTTCCATGCCACCGTCGTTGTGCCATTTCTCATCACCAAAGCCATTATGGCCAATGCTGATAACACGGCTTCTGCTTCCTCTATCTCTACTCTTGTCCACCGGCTTCTGCCGAATCTGTCGTTTAATTTAACTGCCGCCGAATCTGTCGTTTAA ATGGCCTCCCCGAAGCTTGCCGTCGTCAAAACCTCTCTGAAATTCCTTCTCTGCAGTTCTTCGTCTCTTTCCTCACTGGCACCACCCACCTCAAAAAACCCCTTTCAACAGCTCCTCCAATCCATGGCGGATTCCGGCGACCTCCCTTTGTGCGTCATCACTGATTACTTTCTTGGTTGGAACGCCAGCATTTGCCAAGACTTCCGCGTTCCAAGATTGGTCTTCCATGCCACCGTCGTTGTGCCATTTCTCATCACCAAAGCCATTATGGCCAATGCTGATAACACGGCTTCTGCTTCCTCTATCTCTACTCTTGTCCACCGGCTTCTGCCGAATCTGTCGTTTAATTTAACTGCCGCCGAATCTGTCGTTTAA MASPKLAVVKTSLKFLLCSSSSLSSLAPPTSKNPFQQLLQSMADSGDLPLCVITDYFLGWNASICQDFRVPRLVFHATVVVPFLITKAIMANADNTASASSISTLVHRLLPNLSFNLTAAESVV Homology
BLAST of Carg21177 vs. NCBI nr
Match: KAG7037568.1 (hypothetical protein SDJN02_01196, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Carg21177 vs. NCBI nr
Match: KAG6608210.1 (Serine/arginine-rich splicing factor RSZ22, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 228.4 bits (581), Expect = 3.4e-56 Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Carg21177 vs. NCBI nr
Match: XP_023523412.1 (UDP-glycosyltransferase 73B3-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.0 bits (406), Expect = 6.6e-36 Identity = 81/90 (90.00%), Postives = 85/90 (94.44%), Query Frame = 0
BLAST of Carg21177 vs. NCBI nr
Match: XP_038900000.1 (UDP-glycosyltransferase 73B3-like [Benincasa hispida]) HSP 1 Score: 125.2 bits (313), Expect = 4.0e-25 Identity = 60/90 (66.67%), Postives = 72/90 (80.00%), Query Frame = 0
BLAST of Carg21177 vs. NCBI nr
Match: QWT69379.1 (UGT73B4 [Gynostemma pentaphyllum]) HSP 1 Score: 85.1 bits (209), Expect = 4.6e-13 Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0
BLAST of Carg21177 vs. ExPASy TrEMBL
Match: A0A2G5ET00 (Glycosyltransferase OS=Aquilegia coerulea OX=218851 GN=AQUCO_00400009v1 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.4e-12 Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Carg21177 vs. ExPASy TrEMBL
Match: A0A1U8AKW8 (Glycosyltransferase OS=Nelumbo nucifera OX=4432 GN=LOC104605345 PE=3 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of Carg21177 vs. ExPASy TrEMBL
Match: A0A2P6PZR8 (Glycosyltransferase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0305151 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.7e-11 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 0
BLAST of Carg21177 vs. ExPASy TrEMBL
Match: A0A200QZ31 (Glycosyltransferase OS=Macleaya cordata OX=56857 GN=BVC80_1829g36 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 4.6e-11 Identity = 36/90 (40.00%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of Carg21177 vs. ExPASy TrEMBL
Match: A0A7J6V4B4 (Glycosyltransferase OS=Thalictrum thalictroides OX=46969 GN=FRX31_031423 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 6.1e-11 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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